>input_sequence_24476
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-------------------------------------------CCGGCCTTCCACATCTCTTACTCCCGCGGAGCCATCT
ATCTATCC--ATCTCTTCTCCGCGCCATCCCATCTAGTCTCG-----TCTCCTGCCCCTCGGAGGTCGAGATGGCGGCGG
CGGCGGCGCG------AGTGGTTGCCCTCGCGTGCGTCCTCTCCCTCGTCCTCTCCGCGCAGGCGGAGGCTCCCTACAGG
TTCTTCGACTGGGAGGTCACCTATGGCGACATCAATCCGCTCGGAGGAGTTCCGCAGCAGGTAC----ATGTAGTGCAGA
GCCAAGCTAGCCATGCTGTTCTAATCTGTG----CTGCGCTGCATCTGAGGTTAACTGCGACGACATTTGCTTTTCGATC
TCTGTAGGGTATTCTGATCAACGGGCAGTTTCCGGGGCCGGAGGTCGACTGCCAGACGAACGACAACCTGGTCATCAACG
TGCGCAACCGGCTGCCGGAGCCGTTCCTGCTTTCATGGCAAGTTCTTTTTAGCTTACTCGAGACATTCTTCC-AAGCGTT
GCATGCACCAGTTCAATCTGCATTAATTACTTCCTTCTGT-CTGTGATCGGTTTTAGCTTACTAGCTCTAACATCGTTGG
ACAACTTTAATTTGCATCAGTTTAGATT----------------------------------------------------
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TTTTTTAG----------------------ATCTGCATTAACTTA-TGGTGTCGTCCAGATCAAAAAAAGCGGTCGTAAA
AGGGGAGTTTTTTTTTGCGTGTAGTAGCACTCAAGTCGCGCAGCGCCGTCTGGTTTAAGCTTTGCAACGCATCTGATCTT
GAAACGGCGATCAGCATTCAGCAAGTCACTGAACAAAAATAGATGCATGCCAAATTCCTTCACTGCCAATTGCAAACACA
GAACAACAGTGATGGGTAATTCTGTTGCATGCATTGTGATGTCTCTCCTATTCGTTCTTAATTTGATGGTAATTAATTAC
TGCAAAATATATCTC----GTATCACCTTTCCGGATATCTCGGCGACTACAAATAAGTTACCTGCTGAATTAATCTACTG
AAGCACTTTTATCCATTATTTTTGCAAATGCAACAGTAACGTACTCGTAATACACAGTAACTCATGAACAGGAACGGGAT
CCAGCAAAGGAAGAACTCGTGGCAGGACGGCGTGTCCGGTACCAACTGCCCGATCCCTCCTGGCCAGAACTACACGTACC
ACATGCAGGCCAAGGACCAGATCGGCAGCTTCTTCTACTTCCCGTCGCTCGCCTTCCACAAGGCGGCCGGCGGCTTCGGC
GCCATCCGCATCAACAGCCGCCCGCGGATCCCCGTCCCCTTCCCCCCACCGGCCGACGAGTTCACCGTGCTCATCGGCGA
CTGGTACAACACTACCCACAAGGTACATGTGTCACCAAGCAAGGCGTTGGCTTGCACGAAATGCACTCATCTGTCGGCTC
ATTTCAGTTTTGGTGTGTG---TAACTGACCGTCTTGGTTTTGCTTGTCAGGCTCTCCAAGCCATGCTGGACGACGGGAA
GCTGCTCCCTTCCCCTGACGCTATCCTGATCAACGGTAAGGGCCCGGGGCGCGCCAACTTCACGGTGGAGCAGGGGAAGA
CGTACAGGCTGCGCATCTCCAATGTCGGCCTGCGGAGCACGCTCAACTTCATGATCCAGGACCACAACGTAACGCTCGTG
GAGGTGGAGGGCACCCACACGGTGCAGAACACCTACACCTCCCTCGACGTCCACGCCGGCCAGTCGCTCTCCGTGCTCTT
CACCGCCGACCGCCCCGCCAGGAGCTACCACATCGCCGTCTCGTCGCGGTTCACCAACCAGACCCTCAACTCCACCGCCG
TGCTGCGCTACGCCGGCTCGACCGGCCCCGTCTCCGGGCCGCTGCGTGCCGGGAACCAGAGTGACGTTGACTTTTCACTG
AACCAGGCTCGCTCCATCAGGTACGGATCACGACATCTCGACCGTCCGTTCTAG------------T---GATAATCGGC
GTGTTTGGGTCTGAGCTTGCCGTGGTGACCACGTGCAGGACGAACCTGACGGCGAGTGGGCCGCGGCCGAACCCGCAGGG
CTCGTACCACTACGGCTCGATCAACGTGAGCCGCACCATCCGGCTGGCCAACTCGGCGGGGCAGGTCGGCGGCAAGCCGA
GGTACGGCGTGAACGGCGTGTCGTACGTGGACGCCGACACGCCCCTCAAACTGGCCGACTACTACAACATCAGCGGCGTG
TTCCGGATGGACGGCATCCCGGACGCGCCCGCGGCCACCCACAGCGGGACGCAGAACGGGACCGGCGCCGACGCGGCGCT
TAAGAACCAGACGGCCGTCATGGACTCCGACCACCGCAGCTTCGTCGAGGTCGTGTTCGAGAACAGCGAGGACAGCGTCC
AGAGCTGGCACCTCGACGGCTACAGCGTCTTCGTCGTCGGGTACGTGTACATCAGGTCATCGTGAGGCTGATGCATATGT
ATAT-ATACTCTGCTCCATGATCATTCTGCTCGTCTCGTCCA-TAGGATGGACAAGGGGGCGTGGAGCGAGGAGAGCAGG
AAAGGCTACAACCTCGTGGATGCAGTCACGAGGTGCACGGTGCAGGTAAGATTTTCTTTCTTTTCATTCATGCTTAGTGG
TAGTATCAAGATACTGTCAGTGCGTTTTTATTCACCTCTTTTGTTGTTGGTTTGCGAAGGTGTATCCAAGAGGGTGGACG
GCGATCTTCATCGCGCTGGACAACGTGGGGATGTGGAACGTGAGGTCGGAGGATTGGGTGCGCAGGTACCTGGGCCAGCA
GTTCTACCTCCGGGTGTACACGCCGACGCACTCCGTCCGCGACGAGCTCCCCGTGCCGACCAACGCGATCCTCTGCGGCC
GCGCTACCAACAAGAGCCGCCTGCCATTCTCTCAGTAGTA-------AGCAGCCGCTGGCAGGGAAAGATCCAATTGTAT
CAGAGCATTG---------TATGGTGTGCAAGTCGAACTGTCGAAGACTTAGTTTGGCTGGTTACTGGTTAGGGCTTAGT
CTGGGCTTAGGAATTTACTCATGGAGTCAAATCATTT--GGCCTACGTGGCCTCGGTATAAACAAGAAAGATAGTATGTG
ATATCTCTTATCTGGGCTATTTCTGGCTTATAAAAACATTAATTTTC---------------------------------
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---------------------------------------------------
>chr2B_1_TraesCS2B01G423900
TACTAATATTCTTCAAACATATCAGGCACTTATGGGCATACAATTCCAATTCTTCGCAGAGACACACCAAAACTATTTTG
CTTC-AAAATTAAAGCAGGCCAAGAGATGACACGAACTAATTACACGAATAAATGGTAGCTGGGAAAAGCAATAGCTGCC
AGCACAAGCCAGGAGAAAATCGACTCCAAACATCGGATATCTTAG--------CATATAATCTAAGCAAACGGAAACGTT
TCACAGGCAAGGAGGAACAGAGGAGGGGAGAGGGGGCTGGTTATACCACTGATCCCGGCGGATTTGGCTCCGGAGGGTCG
GATCGAGCAGGAAGACGGCGCCGATGAAGAGCGCATGCAGCAGCATGACGATTAACCGGACACACCTCCAGGGCTTCCTC
CCTGCGCTCAAATCCCCAC---CCCCGGTCAGGCATTCAGACCCCGGTCGGAACCCCCACCGCGACCAAATCGAATCAAT
GGACGAACCGTGTGAGCCGTGGCGCTGGGGCTGGGATAGGACCCTGATGGCCTCATGGGGAGGATCGCTTTCCCCGCAGC
ACGGCATCCTCGCCGCCGCACCGACGTGAGGAGGAGGAGGAGGGAGGCGGTGGCGACGGTTACCGGTGGCCGGTTCTTCC
GCG---GGAGGAGGAGGAGCCGGCCTGCAGTTACGGTGGGGAGGG-CCCACCTGGAAGTGGACGGACTCTCGATTCATTT
TATCCCGGACACGGACTCTGGCTTCTTTT-----------------------------TTTTAGAGGGTCGGACTCTGGC
TTCTGCAGTGTGTCACATACACAC--CCCACAGGCCAAGGCCCAGTTCCAGATGTGCCGAAAATCCAAGCCCAGAGTTGG
CCCGTCAGGCCAGCCTGGCATGG----CCGCA-GGGGGGCGCATCTCCAAAAAGGA------TTTTTTTTTGTAACAA--
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----------------------CCTGCACATCGTAACAGATTAAAAAATATTTCGAGATATGATCCCAACAGATTTCCAT
CTCTATACGGCGCGGGAGGGG-CCGCCGTCTATAAATGCCCACCCGGCCTTCCACATCTCTTACTCCCGCGGAGCCATCT
ATCTATCC--ATCTCTTCTCCGCGCCATCCCATCTAGTCTCG-----TCTCCTGCCCCTCGGAGGTCGAGATGGCGGCGG
CGGCGGCGCG------AGTGGTTGCCCTCGCGTGCGTCCTCTCCCTCGTCCTCTCCGCGCAGGCGGAGGCTCCCTACAGG
TTCTTCGACTGGGAGGTCACCTATGGCGACATCAATCCGCTCGGAGGAGTTCCGCAGCAGGTAC----ATGTAGTGCAGA
GCCAAGCTAGCCATGCTGTTCTAATCTGTG----CTGCGCTGCATCTGAGGTTAACTGCGACGACATTTGCTTTTCGATC
TCTGTAGGGTATTCTGATCAACGGGCAGTTTCCGGGGCCGGAGGTCGACTGCCAGACGAACGACAACCTGGTCATCAACG
TGCGCAACCGGCTGCCGGAGCCGTTCCTGCTTTCATGGCAAGTTCTTTTTAGCTTACTCGAGACATTCTTCC-AAGCGTT
GCATGCACCAGTTCAATCTGCATTAATTACTTCCTTCTGT-CTGTGATCGGTTTTAGCTTACTAGCTCTAACATCGTTGG
ACAACTTTAATTTGCATCAGTTTAGATT----------------------------------------------------
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TTTTTTAG----------------------ATCTGCATTAACTTA-TGGTGTCGTCCAGATCAAAAAAAGCGGTCGTAAA
AGGGGAGTTTTTTTTTGCGTGTAGTAGCACTCAAGTCGCGCAGCGCCGTCTGGTTTAAGCTTTGCAACGCATCTGATCTT
GAAACGGCGATCAGCATTCAGCAAGTCACTGAACAAAAATAGATGCATGCCAAATTCCTTCACTGCCAATTGCAAACACA
GAACAACAGTGATGGGTAATTCTGTTGCATGCATTGTGATGTCTCTCCTATTCGTTCTTAATTTGATGGTAATTAATTAC
TGCAAAATATATCTC----GTATCACCTTTCCGGATATCTCGGCGACTACAAATAAGTTACCTGCTGAATTAATCTACTG
AAGCACTTTTATCCATTATTTTTGCAAATGCAACAGTAACGTACTCGTAATACACAGTAACTCATGAACAGGAACGGGAT
CCAGCAAAGGAAGAACTCGTGGCAGGACGGCGTGTCCGGTACCAACTGCCCGATCCCTCCTGGCCAGAACTACACGTACC
ACATGCAGGCCAAGGACCAGATCGGCAGCTTCTTCTACTTCCCGTCGCTCGCCTTCCACAAGGCGGCCGGCGGCTTCGGC
GCCATCCGCATCAACAGCCGCCCGCGGATCCCCGTCCCCTTCCCCCCACCGGCCGACGAGTTCACCGTGCTCATCGGCGA
CTGGTACAACACTACCCACAAGGTACATGTGTCACCAAGCAAGGCGTTGGCTTGCACGAAATGCACTCATCTGTCGGCTC
ATTTCAGTTTTGGTGTGTG---TAACTGACCGTCTTGGTTTTGCTTGTCAGGCTCTCCAAGCCATGCTGGACGACGGGAA
GCTGCTCCCTTCCCCTGACGCTATCCTGATCAACGGTAAGGGCCCGGGGCGCGCCAACTTCACGGTGGAGCAGGGGAAGA
CGTACAGGCTGCGCATCTCCAATGTCGGCCTGCGGAGCACGCTCAACTTCATGATCCAGGACCACAACGTAACGCTCGTG
GAGGTGGAGGGCACCCACACGGTGCAGAACACCTACACCTCCCTCGACGTCCACGCCGGCCAGTCGCTCTCCGTGCTCTT
CACCGCCGACCGCCCCGCCAGGAGCTACCACATCGCCGTCTCGTCGCGGTTCACCAACCAGACCCTCAACTCCACCGCCG
TGCTGCGCTACGCCGGCTCGACCGGCCCCGTCTCCGGGCCGCTGCGTGCCGGGAACCAGAGTGACGTTGACTTTTCACTG
AACCAGGCTCGCTCCATCAGGTACGGATCACGACATCTCGACCGTCCGTTCTAG------------T---GATAATCGGC
GTGTTTGGGTCTGAGCTTGCCGTGGTGACCACGTGCAGGACGAACCTGACGGCGAGTGGGCCGCGGCCGAACCCGCAGGG
CTCGTACCACTACGGCTCGATCAACGTGAGCCGCACCATCCGGCTGGCCAACTCGGCGGGGCAGGTCGGCGGCAAGCCGA
GGTACGGCGTGAACGGCGTGTCGTACGTGGACGCCGACACGCCCCTCAAACTGGCCGACTACTACAACATCAGCGGCGTG
TTCCGGATGGACGGCATCCCGGACGCGCCCGCGGCCACCCACAGCGGGACGCAGAACGGGACCGGCGCCGACGCGGCGCT
TAAGAACCAGACGGCCGTCATGGACTCCGACCACCGCAGCTTCGTCGAGGTCGTGTTCGAGAACAGCGAGGACAGCGTCC
AGAGCTGGCACCTCGACGGCTACAGCGTCTTCGTCGTCGGGTACGTGTACATCAGGTCATCGTGAGGCTGATGCATATGT
ATAT-ATACTCTGCTCCATGATCATTCTGCTCGTCTCGTCCA-TAGGATGGACAAGGGGGCGTGGAGCGAGGAGAGCAGG
AAAGGCTACAACCTCGTGGATGCAGTCACGAGGTGCACGGTGCAGGTAAGATTTTCTTTCTTTTCATTCATGCTTAGTGG
TAGTATCAAGATACTGTCAGTGCGTTTTTATTCACCTCTTTTGTTGTTGGTTTGCGAAGGTGTATCCAAGAGGGTGGACG
GCGATCTTCATCGCGCTGGACAACGTGGGGATGTGGAACGTGAGGTCGGAGGATTGGGTGCGCAGGTACCTGGGCCAGCA
GTTCTACCTCCGGGTGTACACGCCGACGCACTCCGTCCGCGACGAGCTCCCCGTGCCGACCAACGCGATCCTCTGCGGCC
GCGCTACCAACAAGAGCCGCCTGCCATTCTCTCAGTAGTA-------AGCAGCCGCTGGCAGGGAAAGATCCAATTGTAT
CAGAGCATTG---------TATGGTGTGCAAGTCGAACTGTCGAAGACTTAGTTTGGCTGGTTACTGGTTAGGGCTTAGT
CTGGGCTTAGGAATTTACTCATGGAGTCAAATCATTT--GGCCTACGTGGCCTCGGTATAAACAAGAAAGATAGTATGTG
ATATCTCTTATCTGGGCTATTTCTGGCTTATAAAAACATTAATTTTCTGCCTTATTTTGCAAGTCTTTGGATCAATAT-T
TTTTAAAAGAGAAGTATACTTTTCGTCCTCAACTACTGGCGAACTCTAGGTTTAGTCTAAGAGCCTGTTCAAA----AAC
TCTCCCAACACTTCAAAGAT---TTCTGAACCTAGCTTCTTGCTCCATGCAGCGATTCCCCATCCGTTCGATAACAAAAT
CAGCTTCTCTGTCGCTACTTTTTTTTTTTGAGACAA--------------------------------------------
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---------------------------------------------------------GCTTCTCTGTCGCTACTTGGCAT
GCCAGCACGTCTAGCGACATATTAGGCCGGTTGGAGATCGTCCCATGGGCTGGAAACCCAATTTGGAGGCAGGATGGAAG
CCCAAGAAGGAAGGGAAAGGCGTGATTCTGTTCGTTGACGAAGAAAGAAGAGAGGAGAGAGACTAAACGAACCGTTGCAA
ATCTTGTAATTTTAGTGAATTCGGCGTTCTAAGGATTCCATGAAGCGGCGATTTCTCAGCTTCTCTAAACTTCTAGAAAA
TACACTACGAAACACCACAGCTTCTCGAAGCTAGCCCCAGAGCTACGATGTTCGTCTCTGCTCCATCCTTGAGTTCATGA
AGCGTGGAGCGTGAATGACTTCCGAACAAGCTCTAAACTTCAAAATCGGAGAACTTGCATCTCCAACTCTTGAAATCGGA
CAAGTTTAGTCCCTTGTCTCGGCTGACCCGGTATCGCTG-CTGACTCAGCATAGTTTTGACCGGTCATCGTCCACGTGGC
AGTGTTTCGACGGGAGCTCCCGTGGCTCATGCACATATTCCCAGTGCAGCTCAACATCAACATCTC--------------
TCATGTCAGTCGCAGCTCGCCATGGGAGCGTCGCAGCTCGGCGTTGTCTTAGCTGTTGTGCTCCTTGTCGACGAAGCGGT
CGCTGTTGTGACCAGGAGATGTGGCATTCACACGCACTCTGGCCACCAGCCGCACCACACGCACTCTAGCCACCAGGCCC
GCTACAGAAATTGTTCGGTCCGGGCCGCGAAAATCAGACCGAAAAAACTTC
>chr2A_1
TACTAATATTCTTCAAACATATCAGGCACTTATGGACATGCACTTCCAATTCTTCGCAGAGACACACCAAAACTATTTTC
CTTCAAAAATTAAAGCAGGCCACGAGATGACACGAACTAATTACACGAACAAATGGTAGCTGGGAAAAGCAACAGCTCCC
AGCACGAGCTAGGGGAAAATCGACTCCAAACATCGGATATCTTAAGTTCTTAAGATATAATCTAAACAAACGGAGACGTA
TCACAGGCAAGGAGGAACAGGGGAGGGGAGAGGGG-CCGGTTATACCACTGATCCCGGCGGATTTGGCTCCGGAGGGCCG
GATCGAGCAGGAAGACGGCGCCGATGAAGAGCGCATGCAGCAGCATGACGATTAACCTGACACACCTCCAGGGTTTCCTC
CCTGCGCTCAAATTCCCCGTCTCCCCGGTGAGACATTCAGACCCCGGCCGGAACCCCCACCGCAACCAAATCGAACCAAT
GGACGAACCGTGCGAGCCGTGGCGCTGGGGCTGGGATAGGACCCTGATGGCCTCATGGGGAGGATCGCTTTCCCCGCAGC
ACGGCATCCTCGCCGCCGCACCGTCGTGAGGAGCAGGAGGAGGGAGGCGGTGGCGACGGTTACCGGTGGCCGGTGCTTCC
GCGGGAGGAGGAGGAGGAGCCGGCCTGCAGTTACGGTGGGGAGGGGCCCACCTGGAAGTGGACGGCCTCTCGATTCTTTT
TATCCCGGACCCGGACTCTGGCTTTTTTC-----------------------------TTT--GGGGGTCGGACTCTGGC
TTCTTCAGTATGTCACATACACACACCCCACAGGCAAAGGCCCAGTGCCAGATGTGCCGAAAATCCAAGCCCAGAGTTGG
CCCATCAGGCCAGCCTGGCATGG----CCGCAGGGGGGGCGCATCTCCAAAAAGGAAAAAAAANNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNCCCGCACATCGTAACAGATTCAAAAATATTTCGAGATAT-ATCCCAACAGATTTCCAT
CT--ATACGGCGCGGGAGGGGGCCGCCGTCTATAAATGCCCACCAGGCCTCCTCCATCTC-TACTCCCGCGGAGCCATCT
ATCCATCCATATCTCTTCTCCGCGCCATCCCATCTCGTCTCG-----TCTCCTGCCCCTCGGAGGTCGAGATGGCGGCGG
CGGCGGC---------AGTGGTTGCCCTCGCGTGCGTCCTCTCCCTCGTTCTCTCCGCGCAGGCGGAGGCTCCCTACAGG
TTCTTCGACTGGGAGGTCACCTATGGCGACATCAACCCGCTCGGAGGAGTTCCGCAGCAGGTGCATATACATAGTTTTGA
GCCTAGCTAGCTATTGCTGCTC--------TAATCTGCGCTGCGTTTGAGGTTAACTGCGACGACGTGTGATTTTTGA--
TCTGCAGGGTATTCTGATCAACGGGCAGTTTCCGGGGCCGGAGATCGACTGCCAGACGAACGACAACCTGGTCATCAACG
TGCGCAACCGGCTGCCGCAGCCGTTCCTGCTTTCATGGCAAGTTCTTTTTAGCTTGCTCGAGACATTCTTCCTAAGCGTT
GCATGCACCGGTTCAATCTGCATTAATTACTTCCTTCTGGTTTTTGATCGGTTTTAGCTTACTAGCTCTAACATCGTTGG
ACAACTTTAATTTGCATCAGTTCAGTTT----------------------------------------------------
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CTTCCCCCTAAAAAAAGTTTAGTTTCTTTAATCTGCATTAGTTTA-CGGTGTCGTCCAGATCAAAAAAAGCGGCCGTTAA
AAGGGGAGGTTTGTTTGCGTGTAGTAGCACTCAAGTCGCGCAGCGTCGTCTCGTTTAAGCTTTGCAACGCATCTGATCTT
GAAACGGCGATC-------AGCAGGTCACTGAACATAAATAGATGCATGCCAAATTCCTAAACTGTCAATTGCAAACACA
GAGAA----------GTAATTCTGTTACATGCATCACGATGTAA--CCTATTCGTGCTTAATTTGGTAGTACTTAATTAC
TGCAA-GATATATCTCA---TATCACTTCTCCGGATATCTC-GCGAGTACAAACAAGTTACCTGCAGCATTAATC-AGTT
AATCACTTCTATCCATCGTTTGCGCAAAGGCAAAAGTAACGTA--------ACACGGATACTCATGAACAGGAACGGGAT
CCAGCACAGGAAGAACTCGTGGCAGGATGGCGTGTCCGGCACCAACTGCCCGATCCCTCCGGGCCAGAACTACACGTACC
ACATGCAGGCCAAGGACCAGATCGGCAGCTTCTTCTACTTCCCGTCGCTCGCCTTCCACAAGGCGGCCGGCGGCTTCGGC
GCCATCCGCATCAACAGCCGCCCGCGGATCCCCGTCCCCTTCCCCCCGCCGGCCGACGAGTTCACCGTGCTCATCGGCGA
CTGGTACAACACCACCCACAAGGTACGTATGTCACCGAGCAAGGCGTTGGCTTGCACGAAACGCACTCATCTGTCGGCTC
ATTTCAGTTTTGGTGCGTG---TAACCGATCGTCTTGGTTTTGCTTGTCAGGCTCTCCAAGCCATGCTGGACGACGGGAA
GCTGCTGCCTTCCCCTGACGCCATCCTGATCAACGGCAAGGGCCCGGGGCGCGCCAACTTCACGGTGGAGCAGGGTAAGA
CGTACAGGCTGCGCGTCTCCAACGTCGGCCTGCGGAGCACGCTCAACTTCATGATCCAGGACCACAACGTGACCCTCGTG
GAGGTGGAGGGCACCCACACGGTGCAGAACACCTACACCTCCCTCGACGTCCACGCCGGCCAGTCGCTCTCCGTGCTCTT
CACCGCCGACCGCCCCGCCGGGGGCTACCACATCGCCGTCTCGTCGCGGTTCACCAACCACACCCTCAACTCCACCGCCG
TGCTGCGCTACGCCGGCTCGACCGGCTACGCCTCCGGGCCGCCGCGTGCCGTGAACCAGAGCGACGTTGACTTTTCGCTT
AACCAGGCTCGCTCCATCAGGTACGGATCACGTCGTCTCGACCGTCCGTTCTAG------------TAACGATAATCGGC
GTGTTTGGGTCTGAGCTTGCTGTGGTGACCACGCGCAGGACGAACCTGACGGCGAGCGGGCCGCGGCCGAACCCGCAGGG
CTCGTACCACTACGGGTCCATCAACGTGAGCCGCACCATCCGGCTGGCCAACTCGGCGGGGCAGGTCGGCGGCAAGCCGA
GGTACGGCGTGAACGGCGTGACGTACGTGGACGCCGACACGCCCCTCAAGCTGGCCGACTACTACAACATCAGCGGCGTG
TACCGGATGGGCGCCATCCCGGACGCGCCCGCGGCCAGCCACAGCGGGACGCAGAACGGGACCGGCGCCGACGCGGCGCT
GAAGAACGCGACGGCCGTCATGGACTCCGACCACCGCTCCTTCGTCGAGGTCGTGTTCGAGAACAGCGAGGACAGCGTCC
AGAGCTGGCACCTCGACGGCTACAGCGTCTTCGTCGTCGGGTACGTGCACATCAATTCATCATGACACTGATGCATATGT
ATAT-ATACTCTGCTCCATGATCATTCTGCTCGTTGGTCCTCGTAGGATGGACAAGGGGGCGTGGAGCGAGGAGAGCAGG
AAAGGCTACAATCTCGTGGATGCAGTCACGAGGTGCACGGTGCAGGTAGGATTTTCTTTCTTTTCATTCATGCTTAGTGG
TGGTATCAAAATACTGTCAATGTGTTTTTATTCACCTATTCTGTTGTTGGTTTGCGAAGGTGTATCCGAGAGGGTGGACG
GCGATCTTCATCGCGCTGGACAACGTGGGGATGTGGAACGTGAGGTCGGAGGATTGGGTGCGCAGGTACCTGGGCCAGCA
GTTCTACCTCCGGGTGTACACGCCGGCGCACTCCGTCCGCGACGAGCTCACCGTGCCGACCAACGCGATCCTCTGCGGCC
GCGCTGCCAACAAGAGCCGCCTGCCATTCTCTCAGTAGTGAGCACTGAGCAGCCGCTGGCAGGGAATGATCCAATTGTAT
CAGAGTATTAGTAGTGGTATATGGTGTGCAAGTCGAACTGTCGAAGACTTAGTTTGGCTGGTTACTGGTTAGTTCTTAGT
CTGGGCTTAGGAATTTACTCATGGA--------ATTTCAGGCCTAAGTGGCCTCGGTATAAACAAGAAAGATA---TGTG
ATATCTCTTATCTAGGCTATTTCTGG------------------------------------------------------
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---------------------------------------------------
>chr2D_1
TACTAATATTCTTCAAACATATCAGGCACGTATGGACATACACTTCCAATTCTTCGCAGAGACACACCAAAACTATTTTC
CTTC-AAAATTAAAGCAGGCCA----------CGAACTAATTACACGAATAAATGGTAGCTGGGAAAAGCAATAGCTGCC
AACACGGGCTAGGAGAAAATCGACTCCAAACATCGGATA--------TCTTAACATATAATCTAAACAAACGGAAACGTT
TCACAGGCAAGGAGGAACAGAGGAGGGGAGAGGGGGCCTGTTATACCACTGGTCCTGGCGGATTTGGCTCCGGAGGGCCG
GATCGAGCAGGAAGACGGCGCCGATGAAGAGCGCATGCAGCAGCATGACGATTAACCTGACACACCTCCAGGGCTTCCTC
CCTGCGCTCAAATCCCCGG---CCCCGGTCAGGCATTCAGACCCCGGCCGGAACCCCCA---------AATCGAACCAAT
TGACGAACCGTGCGAGCCGTGGCGCTGGGGTTGGGATAGGACCCTGATGGCCTCATGGGGAGGATCGCTTTCCCCGCAGC
ACGGCATCCTCGCCGCCGCACCGACGTGAGGAGGAGGAGGAGGGAGGTGGTGGCGATGGTTACCGGTGGCCGGT-CTTCC
GCG---GGAGGAGGAGGAGCCGGCCTGCAGTTACGGTGGGGAGGG-CCCACCTGGAAGTGGACGGACTCTGGATTCTTTT
TATCCCGGACCCGGACTCTGGCTTCTTTTTTTTTGCCCGGACTCTGGCTTCTTTTTTATTT--GAGGTACAGACTCTGGC
TTCTTCAGTGTGTCACATAC--ACACCCCACAGGCCAAGGCCCAGGTCCAGATGTGCGAAAA-TCCAAGCCGAGAGTTGG
CCCGTCAGGCCAGCCTGGCATGGCCGGCCGCA-GGGGGGCGCATCCCAAAAAAGGAAGAATTTTTTTTTTTGTAACAA--
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------CCTGCACATCGTAACAGATTCAAAAATATTTCGAGATAGGATCCCAACAGATTTCCAT
CT--ATACGGCGCGGGAGGGG-CCGCCGTCTATAAATGCCCACCCGGGCATCTTCATCTC-TACTCCCGCGGAGCCATCT
ATCAATCC--ATCTCCTCTCCGCGCCATCCCATCTCGTCTCGTCTCGTCTCCTGCCCCTCGGAGGTCGAGATGGCGGCGT
CGGCGGCGGCGCGAGTAGTGGTGGCCCTCGCGTGCGTCTTCTCCCTCGTCTTCTCCGCGCAGGCGGAGGCTCCCTACAGG
TTCTTCGACTGGGAGGTCAGCTACGGCGACGTCAACCCGCTCGGAGGAGTTCCGCAGCAGGTAC--ATATATAGTTTCGA
GCCTAGCTAACTATTGCTGTATTGCTGTTTTAATCTGCGCTGCATCTGAGGTTAACTGCGACGTG-TTTGATTTTCGATC
TCTGTAGGGTATTCTGATCAACGGGCAGTTTCCAGGGCCTCAGATCGACTGCCAGACGAACGACAATCTGGTCATCAACG
TGCGCAACCGGCTGCCGGAGCCGTTCCTGCTTTCATGGCAAGTTCTTTTTAGCTTACTCGAGACATTCCTC---AGCGTT
GCATGCACCAGTTTTATCTGCATTAACTACTTCCTTCTGG-TTTTGATCGGTTTTAGCTTACTCG----AACGTCGTTGC
ACAACTTTAATCTGCATCAGTTTAGGGGGTGTTTGGTTCAGGGACTTTTTAGTCCCAGAGACTAGAAAAAAAGGATAATT
GGTTTGATGCCAATATTTGGCATTGCCAATACTTGGCAAGCCAGCAATTGGCAATATCAAAAGTTGCCAATAATTGACAA
CTTTTTGTGAGGTTGGCAAGTAAACATGGTAGCCAACCAAGTACTAGCCAATATTTGGCATTTGTCAAATATTGGAATGC
CAATTTTTGGCGTCAAACCAATAATGCTCAAAGTCCCTAAGAACCAAACGGAAGGGACTTTTTCTACAGGAACTAAAAAA
GACTCTACTAGAGAGTCTTTTTTGATTAGTCCTTGGGACTAGAAAAAGTCCTAGGACTTCTGAACCAAACACCCCCTTAG
TTTTTTAG----------------------ATCTGCATTAGCTTAATGGTTTCGTCGAGATCAAAGAAAGCGGGCGTTAA
AAGGGGAGATTTGTTTGCGTGTAGTAGCACTCAAGTCGCGCAGCGTCGTCTCGTTTAAGCTTTGCTACGCATCTGATCTT
GAAACGGCGATC-------AGCAAGTCGCTGAACAAAAATAGATGCATGCCAAATTCCTTCACTGCCAGTTTCAAACACA
GAGAA----------GTAATTCTGCTACATGCATCATGATGTCT--CCTATTCGTGCTTAATTTGGCAGTACTTAATTAG
TGCAAAGATATATCTCATAGTATCACCTTTCCGGATATCTCGGCGAGTACAAACAAGTTACCTGCAGCATTAATCTAGTT
AATCACTTTTATCCATAGTTTGCGCAAAGGCAAAAGTAACGTA--------ACACAGTTACTCATGAACAGGAACGGGAT
CCAGCACAGGAAGAACTCGTGGCAGGACGGCGTGTCGGGCACCAACTGCCCGATCCCTCCGGGCCAGAACTACACGTACC
ACATGCAGGCCAAGGACCAGATCGGCAGCTTCTTCTACTTCCCCTCGCTGGCCTTCCACAAGGCGGCCGGCGGCTTCGGC
GCCATCCGCATCAACAGCCGCCCGCGGATCCCCATCCCCTTCCCCCCGCCGGCCGACGAGTTCACCGTGCTCATCGGTGA
CTGGTACAACACCACCCACAAGGTACATATGTCGCCAAGCAAGGCGTTGGCTTGCACGAAATGCACTCATCTGTCGGTTC
ATTTCAGTTTTGGTGTGTGCTATAACTGATCCATTTGGTTTTGCTTGTCAGGCTCTCCAAGCCATGCTGGACGACGGGAA
GCTGCTGCCTTCCCCTGACGCCATCCTGATCAACGGCAAGGGCCCGGGGCGCGCCAACTTCACGGTGGAGCAGGGGAAGA
CGTACAGGCTGCGGGTCTCCAACGTCGGCCTGCGGAGCACGCTCAACTTCATGATCCAGGACCACAACGTGACGCTCGTG
GAGGTGGAGGGCACCCACACGGTGCAGAACACCTACACCTCCCTCGACGTCCACGCCGGCCAGTCGCTCTCCGTGCTCTT
CACCGCCGACCGCCCCGCCGGGGGCTACCACATCGCCGTCTCGTCGCGGTTCACCAACCAGACCCTCAACTCCACCGCCG
TGCTGCGCTACGCCGGCTCGACCGGCT---TCTCTGGGCCGCCGCGTGCCTTGAACCAGAGCGACGTTGACTTTTCACTG
AACCAGGCTCGCTCCATCAGGTACGGATCACGTCATCTCGACCGCCCGTTCTAGAGACAAACGGCGT---GTTAATCGGT
GTGTTCGGGTCTGAGCTTGCTGTGGTGACCACGTGCAGGACGAACCTGACGGCGAGCGGGCCGCGGCCGAACCCGCAGGG
CTCGTACCACTACGGGTCCATCAACGTGAGCCGCACCATCCGGCTGGCCAACTCGGCGGGGCAGGTCGGCGGCAAGCCGA
GGTACGGCGTGAACGGCGTGTCGTACGTGGACGCCGACACGCCCCTCAAGCTGGCGGACTACTACAACATCAGCGGCGTG
TACCGGATGGGCGCCATCCCGGACGCGCCCGCGGCCAGCCACAGCGGGACGCAGAACGGGACCGGCGCCGATGCGGCGCT
GAAGAACGCGACGGCCGTCATGGACTCCGACCACCGCTCCTTCGTCGAGGTCGTGTTCGAGAACAGCGAGGACAGCCTAC
AGAGCTGGCACCTCGACGGCTACAGCGTCTTCGTCGCCGGGTACGTGCACATCAAGTCATCGTGAGGCTCATGCATACGT
ATATAATACTCTGCTCCATGATCATTCTCCTCGTCGGTCCTCGTAGGATGGACAAGGGGGCGTGGAGCGAGCAGAGCAGG
AAAGGCTACAACCTCGTGGATGCAGTCACGAGGTGCACGGTGCAGGTAAGATTTTCTTCCTTTTCCTGCTTGACTTGATG
AATGTGTTTTACACT---------------------TCTTTTGTTGCTGCTTTGAGAAGGTGTATCCAAGAGGGTGGACG
GCGATCTTCATCGCGCTGGACAACGTGGGGATGTGGAACGTGAGGTCGGAGGATTGGGTGCGCAGGTACCTGGGCCAGCA
GTTCTACCTCCGGGTGTACACGCCGACGCACTCCGTCCGCGACGAGCTCCCCGTGCCGACCAACGCGATCCTCTGCGGCC
GCGCTGCCAACAAGAGCCGCCTGCCAGTCTCTCAGTAGTA-------AGCAGCCGCTGGCAGGGAATGATCCAATTGTAT
CAGTGTGTTAGTAGTAGCATGGTGTG---AAGTCGAACTGTCGAAGACTTAGTTTGGCTGGTTACTGGTTAGGGCTTAGT
CTGGGCTTAGGAATTTACTCATGGAGTCAAATCATTTCAGGCCTAGGTGGCCTCGGTATAAACAAGAAAGATAGTATGTG
ATATCTCTTATCTGGGCTATTTCTGGCTTATAAAAACATTAATTTTCAGCCTTATTTTACAAGTCTTTGTATCAATATAT
TTTTAATAGAGAAGTATATTTTTCCTCCTCAACTCCTGACGAACTCTAGGTTTAGTCCAAGGGCCTGTTCGCCTCCCAAC
TCTCCCAACTCCAAAGATTCAGCTTCTGAACCTATCTT---------------------------------TAAAAAAAT
CAGCTTCTACGAGTAGGGTGTTTCGGTGCCCAGGCTCATCTGCACCCTGTTAGAAAAAAACATAAAAAATTCAAAACAAA
TTCAAAAAAATTCAATTTTTTTTGTGTGGTAGAAAATTTGATGCGTGAGACCCGCTCAAATTTCATGTCATTTGGACATC
TGAGAAGCTCTCAAAAAACATTTTTACAGACCCCAATTTGTCTTTTTTGCTGAGAGCTGCTCAGATGTCCAAATGACTTG
AAATCTGTAACGGGTCTCACGCATCAAATTGTCTACCACACAAAAAAATTGGATTTGTTTGAATTTTTCTAATATTTGTT
TTGATTTTTTTCGTCAACACGGATGCAGATGAGCTCGGGTGCAGAGATGGATTTTCGGCTTCTCCATCGCTACTTGGCCT
GCA------TCTAGCGACAT----------------------------------------------------------AG
CCCAAGAAGGAAGGGAGAGACGTGATTCTCTTCGTTCATGAAGAAAGAAGAGAGGAGAGAGACTAAACGAACCGTTGCAA
ATCTTGTAATTTTAGCAAACTCCATGTTTTGAGGATTCCATGAAGCTGCTCATTCCTCG---------------------
----------------------------------------------------------------------GAGTTCGTGA
AGCGTGGAGCGTGAATGACTTTTGAACAGGCTCTAAACTTCAAAACCGAACAACTTGCGCCTTCAACTCTTGAAACCGGA
CAAGTTTAATCCCTTGTCTCGGCTGACCCGGTATCGCTGACTGACTCAACACAGTTTTGACCGGTCTTCGTCCACGTGGC
GGGGTTTCGACGGGAGCTTCCGTGGCTCATGCACATACGCCATGTGCAGCTCAACATCAACATCCCTGTCGCGCTCTCCT
TCATGTCAGTCGCACTTTGCCACGGGAGCATCATAGCTCGGCGTTGTCTCAGTTATTGTGCTCCTCATCGACGGAGCGGT
CGCTGTTGCAACCAGGGGATGTGGCATCCACACGCACACTGGCCACCAGCCACACCACAGGCAC----------------
---------------------------------------------------
>SNPs
-----------------------------------S------S------------------------------------S
----------------------S---------------------------------------------------------
-----S---S----------------------------------S--------------------S--------------
-------------------------------------S---------------------------------------S--
---------------------------------------------------------S----------------------
-----------------SS----------------------------S---------------S-----------S----
------------S-------------------------------------------------------------------
--------------------------------------------------------------------------S-----
----------------------------------------------------------------------------S---
----------S--------------------------------------------------SS-----------------
----S---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------S-------------------------------------
--SS------------------------------------------------SS------S-------------------
---S-------------------------------S--------------------------------------------
--------SS----------------------------------------------------------------------
-----------------------------------S----------------------------------S----SSS--
---S-------S--SSSSS-S-SSSSSS-S-----------------------------------S----S---------
-------------------------------------------S------------------------------------
--------------------------------------------------------------------------------
---------------------------------------S-S-S------------------------------------
-------------------------S------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------S--------------------------------S---S--
-S---SSSS---S--------------------------------S-----S----------------------------
------------SSSSSSS-------------------------------------------------------------
--SS-SSSSSSSSSS-----------S-------SS--------SS---------S---------S-S---S--------
------SSSSSSSSS-------------------------------S------S-----------S-S---------S-S
--S-------------SS---SS-----S----S---------SSSSSSSS-------S---------------------
------S--------------------------------S--------------------S-------------------
--------------------------------------------------------------------------------
-----------------------------------------------S--------------------------------
------------S---------------S---------------------------------------------------
-----------------------------S--------------------------------------------------
------S--------------S--------------S-------------------------------------------
--------------S-------S-----------------------------------------------S---------
--------------------------------------------------------------------------------
-------------------S--S---------------------------------------------------------
--------------------------SS--------------S--------S---------S------------------
--------------------------------S-----------------------------------------------
--------------------S-----------------------------------S-----------------------
---------------S--S-------------------------------------------------------------
-------------------------------------------------S------------------------------
-S--------S--S-----------------------S------------------------------------------
S------SS----------------------------SS-----------------------------------------
-----------------------------------------------S------S-------------------------
-----------------------------------SSSS-SS--------------------------------------
--------------------------------------------------------------------------------
---------S---------S--S---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----S------------------------------------------------------------S-------------
-----S---S----------------------------------------------------------------------
---------------------------------------------S----------------------------------
-----------------------------------------------S----------S----------S----------
------S-----------S-----S---------S---S------------------S---S--------SSS-------
---------S-SSS-S-SSS--------------S---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---S-----
--------SS-SSSSSSS-S---SSS-SSSSSSSSS--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------SS------------S-
--SSSSSSS-----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--
----------------S--S---------S------S-S-----------------------------------------
---------------SS--S--SSS---S-S---------------S--SSS---SSS-SSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------S---
---------------------SS-----S----------------S--S-S-------SS--S------------S----
--------S---------------------------------------S--S--------------S-------------
S-S---------------S------------------SS--SS---------------------S---------------
--------------SS-S----S------S--SS---------------S--S-S----------SS------S------
--------SS------S----------S---------S-------------S-------S----SSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_717
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------GTGGACGGACTCTCGATTCA---
--------------------------------------------------------------------------------
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---------------------------------------------------
>reverse_2807
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------AAGGAAGAACTCGTGGCAGG------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------
>forward_2407
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-------------------------------------------------------------------AAGCGGTCGTAAA
AGGGGAG-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------
>reverse_4201
--------------------------------------------------------------------------------
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----------------------------------------CATAGGATGGACAAGGGGGC--------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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---------------------------------------------------
>forward_2687
--------------------------------------------------------------------------------
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---------------------------TTTCCGGATATCTCGGCGAC---------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------
>reverse_4202
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-----------------------------------------ATAGGATGGACAAGGGGGCG-------------------
--------------------------------------------------------------------------------
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---------------------------------------------------
>forward_3922
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--------------------------------------------------------------TACAACATCAGCGGCGTG
TT------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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---------------------------------------------------
>reverse_5013
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------------CGATTCCCCATCCGTTCGAT--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------
