>input_sequence_24436
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-----------------------------------------ATGGCGTCCGTAGCGGCGGTGGAGGGCGCGGCCGCGGCG
CTCCGGTCGGTGCTGTCGCGCGCGCAGCAGGCGGCGGCGCGGGCGGGGCGCGCTCCGGAGTCGGTGCGCGTGGTGGCGGT
GAGCAAGACGAAGCCCGTGGGCGTCATCCGCGGCGTGTACGACGCCGGCCACCGCTGCTTCGGCGAGAACTACGTCCAGG
AGCTCATCGACAAGGCCCCCCAGGTTGTACCCC--GCGGAAAAGCTCAAAACGTTTGT-CCCCTTTCTGGCTTTGTGAAT
GGACTACTGATTA-GAACGTGGATGGGAAACGGGTTGCTGAGTAATCTCGTTCCAGAGTTATCGTCCATCTATNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATACCAAAAACA
TAGGAATTTCG-CCAACAGTTTAAACTTAATT--GATATTATATTGGAAA----TACAAAGTGCTCCATGGTAGAAATTA
TATGGTTTCTAATCCTAAAAATCAAACACCCAAATCTATAGGAAAATTTTCATAAGAATTGAA---CTCCAAAATTACTG
TGATTCAAAGAAGCCGAAAAAAATACGAGGATCATCCGAACGTTCATATTCACTTTGTTTGCTGTCCTCTCTC-------
--------------------------------------------GCATGAAGCTTGGTTCGTACCAGAGGGTACAAAATT
ATCCTGTGTAGAGGTGTATATGGAACATCAGACATTGCTTTTGTATAACCAATC---ATTCTATGATGTGGCCGTATTTC
CCCAACAGC-------TTTCCACTCTTAAGGATTTCGGAAGTGTTTCAAACATTTAAATGGATATACTTGCCTG---GTG
CAGGGCTTGAGCACTATGTTTGGTAGTCTGTCAGACCAGTGACCTAATTCTTATCAGTCATGTAGTTGTCTAACAACGTG
TTCTTCTTGTTGCAGCTTCCAGAGGATATTGAGTGGCACTTCATTGGGAACCTGCAGAGCAACAAAGCCAAAGCCCTCCT
AGGTTACTGTCTGCATTCTTGTTTTGATATTCTGGCAGAGACAAGT---------------------GTTGCTTAGGTTT
TGACGCTGCTACATAAATTTTTATATATTACTCATACTACGCTTGT----------------------------------
--TTTTAGATAGCAAACATATGCAATAAATTAGGAGTATTTGCAC---GATGTGGTTTGGTGTTGGTGTGATTTTTGTTG
TCATAGGATCAGTCTGGTGTTTTAGCTTAAGACACAGTTAAGTGTTAGTTACTTTATTCTGGAATGATTGGTTGG-TTG-
GTTTTGTATTGCTGTGTGCAAGCTCTGTTTGTAAACTCTTTTCCTTTTTAATGAATGACAGAGCTCCTGTTTTCATCTAA
CTTTTTTAGAGATATTCCTCTTTTACTTAAATGT-----------------------GTTCATACCTGATATCTTCTCTA
CTTTATTGCTTGCTATTGAGCTAATGTTTCTCTTCTT-TTCTTAACCTACAGCTGGTGTACCAAATCTTGACATGGTTGA
GAGCGTAGACGATGAGAAGGTATATGCTCAGTTTATGTTGTCTTCTGGTTTATTCAACTGCAGTTTTTTCTAGTTTTAGG
AAATACTTACACCAGGCACATAGTCATCAATGATCACTTCACTGTAGTTGCCTTCTTAAGGTCATA-TTTTGCTTGGTCA
AGAAAAAGTATG-CTTTCCCAGGCTTCATGCATATCGATGACCTCATAGAACTTGTTAAGTTGTTTATTTCCATTGTTCA
ATCAACATGTCTATATTTAGCTTTATTTGTATCATATTTTTCGTAATAATATTTTATTGCGCCAATAGGCCTTGGAAATA
AAATTTGCATTGTGTTAGCATTCTTATCTTGTTTTTTTTTCTCAAG-AAAATGCAAAGCTTGTGTCTCTATTACATTCGT
CTTGTTGCAAGACCAGATTTTTTATCATGCATCTATAATGAGATTGAATGTAATATTTGTTTTTC-TTTCAGATCGCAAA
TCGTCTTGATCGGGTGGTAGCTGATTTGGGGAGAAAACCTCTTAAGGTCTTGGTCCAAGTCAACACAAGTGGAGAAGAAT
GTGGGTACTCTAATTGTCCTTTTTAATACAGTTGTGAACATGTTGGCTTGATATGCAATTTCTCAATGTGAGAGCCTCTG
GTCTTTAATTTTGAACACTGGTACGCAGCACTTTTTTTTTGTAGCTATTTTTAGGTGTTCGTAAGTAATCAGCTTTGCTA
GATGACAGCATATTATACCTGTCTGAGCAATGCTAGACTGGAGATATGTGGTCCTCAAACCATGTTACTGTTTTGCAGCA
AAATTTGGAGTAGATCCCTCAGGGTGTGTGGGATTAGCAAAGCATGTCAAGTTGAGCTGCCCAAATCTTGTATTTTCTGG
TTTGATGACAATTGGAATGCTTGATTACTCCTCAACTCCAGAGAATTTCAAGGTATATTCTGAAGCACAAACTTAATTGG
ACTGATATGCTTCATAGGGCTAATTTATGCTGCTTGCTGAATGCTTAGGCATTGACTAGTTGCCGGAAGGAGGTATGCAA
TGAACTTGGAATACCAGAAGAGCAGTGCGAGCTGTCAATGGGCATGTCTGCCGATTTTGAGCAGGCGGTAAGGAACATGT
TACAAGAAGATAACTCAGAGGTATACAAACTGAATAATAATGTCTAATGGTGTGTACTTTTATTTTGTGTGCGTTTATGC
AGATTGAAATGGGCAGCACAAATGTCAGAGTTGGATCAACCATATTTGGTGCAAGAGAATACCCAAAGAAGAACTAG---
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>chr1B_1_TraesCS1B01G118400
CCCGGCGTTAGCGCCTGCATTGTAGATGCCCTAAGACCCCTCCTGTTACATGCAACAATACAACGAAGGAAAACAATAAT
GAAGCCAAAGAACATGAATAAGATTATATTATTGGATGGTGGAAGTATTATTTAGTACAAAAGTTTTGCATGGACAGTAA
AATTGGTACAAAAATAATAAAGTTATAACCATCCAACCATAGGTTGATTCGCCTTACCATTTAGAGTTACTTCCTCTGTA
AACATACACTCCCTTCGTCTCATAATGTAAGACATTTTTTGACGCTATACGTTATGGGATGGAAGGAGTATATCTCATAT
ATGTTTACAGACAGAATACACAATATTCGTTGTTTTGCAGGGTGAGTTACATAATAATATCTGCTTATGGACTATTCAAT
GATATGGTGTGGAATTACAAGACACATCTATATTAAGTCCCAAATATTGATTTCATAAAGAAAAAGAAATGGACGGCCTT
CAATTTCCCCTGTTTATAAACCCTGTGCTAGATAGAGCGCTTAAAAAAACATGTGCTTGAGAATACGGCTAAATAGTTGT
TTCTTTATTTTTATTTGCCCTCTAGTTAATAATTTCAATTTCATTAAGAAAAACTAACTAAATAAATGGAAAATGAAAAT
TAATAGAATTCTTTTTTTCTTCAAATCCAAAAACTTTCTCTTTTTTATATTGCCAACTTATCCACAAGTATCTGCAGGAC
AATTTCATTAGTTTCGGATCGGATGAAATACAAATACGGAAAATTATTTTGTTGTAAAGATCCCATAAACTTCAACTAAA
TGATGAAGTCGCTTTACAATTCTGCGAACCGTCCAGAATTCCAACCCCGAGCGCTCATTTCCTCAGAAAATAGATCAGGG
GGGCAAAAAGTTAACCACACGAGGAGCCACACACGACTGTAACACATATA-GCGGCTCCCACCAACAACGGCGACGGCGG
CAGCGGCCACGGAGGAGGGCGGCGGATCAGCGGCGCCGGCGATGGCGTCCGTAGCGGCGGTGGAGGGCGCGGCCGCGGCG
CTCCGGTCGGTGCTGTCGCGCGCGCAGCAGGCGGCGGCGCGGGCGGGGCGCGCTCCGGAGTCGGTGCGCGTGGTGGCGGT
GAGCAAGACGAAGCCCGTGGGCGTCATCCGCGGCGTGTACGACGCCGGCCACCGCTGCTTCGGCGAGAACTACGTCCAGG
AGCTCATCGACAAGGCCCCCCAGGTTGTACCCC--GCGGAAAAGCTCAAAACGTTTGT-CCCCTTTCTGGCTTTGTGAAT
GGACTACTGATTA-GAACGTGGATGGGAAACGGGTTGCTGAGTAATCTCGTTCCAGAGTTATCGTCCATCTATNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATACCAAAAACA
TAGGAATTTCG-CCAACAGTTTAAACTTAATT--GATATTATATTGGAAA----TACAAAGTGCTCCATGGTAGAAATTA
TATGGTTTCTAATCCTAAAAATCAAACACCCAAATCTATAGGAAAATTTTCATAAGAATTGAA---CTCCAAAATTACTG
TGATTCAAAGAAGCCGAAAAAAATACGAGGATCATCCGAACGTTCATATTCACTTTGTTTGCTGTCCTCTCTC-------
--------------------------------------------GCATGAAGCTTGGTTCGTACCAGAGGGTACAAAATT
ATCCTGTGTAGAGGTGTATATGGAACATCAGACATTGCTTTTGTATAACCAATC---ATTCTATGATGTGGCCGTATTTC
CCCAACAGC-------TTTCCACTCTTAAGGATTTCGGAAGTGTTTCAAACATTTAAATGGATATACTTGCCTG---GTG
CAGGGCTTGAGCACTATGTTTGGTAGTCTGTCAGACCAGTGACCTAATTCTTATCAGTCATGTAGTTGTCTAACAACGTG
TTCTTCTTGTTGCAGCTTCCAGAGGATATTGAGTGGCACTTCATTGGGAACCTGCAGAGCAACAAAGCCAAAGCCCTCCT
AGGTTACTGTCTGCATTCTTGTTTTGATATTCTGGCAGAGACAAGT---------------------GTTGCTTAGGTTT
TGACGCTGCTACATAAATTTTTATATATTACTCATACTACGCTTGT----------------------------------
--TTTTAGATAGCAAACATATGCAATAAATTAGGAGTATTTGCAC---GATGTGGTTTGGTGTTGGTGTGATTTTTGTTG
TCATAGGATCAGTCTGGTGTTTTAGCTTAAGACACAGTTAAGTGTTAGTTACTTTATTCTGGAATGATTGGTTGG-TTG-
GTTTTGTATTGCTGTGTGCAAGCTCTGTTTGTAAACTCTTTTCCTTTTTAATGAATGACAGAGCTCCTGTTTTCATCTAA
CTTTTTTAGAGATATTCCTCTTTTACTTAAATGT-----------------------GTTCATACCTGATATCTTCTCTA
CTTTATTGCTTGCTATTGAGCTAATGTTTCTCTTCTT-TTCTTAACCTACAGCTGGTGTACCAAATCTTGACATGGTTGA
GAGCGTAGACGATGAGAAGGTATATGCTCAGTTTATGTTGTCTTCTGGTTTATTCAACTGCAGTTTTTTCTAGTTTTAGG
AAATACTTACACCAGGCACATAGTCATCAATGATCACTTCACTGTAGTTGCCTTCTTAAGGTCATA-TTTTGCTTGGTCA
AGAAAAAGTATG-CTTTCCCAGGCTTCATGCATATCGATGACCTCATAGAACTTGTTAAGTTGTTTATTTCCATTGTTCA
ATCAACATGTCTATATTTAGCTTTATTTGTATCATATTTTTCGTAATAATATTTTATTGCGCCAATAGGCCTTGGAAATA
AAATTTGCATTGTGTTAGCATTCTTATCTTGTTTTTTTTTCTCAAG-AAAATGCAAAGCTTGTGTCTCTATTACATTCGT
CTTGTTGCAAGACCAGATTTTTTATCATGCATCTATAATGAGATTGAATGTAATATTTGTTTTTC-TTTCAGATCGCAAA
TCGTCTTGATCGGGTGGTAGCTGATTTGGGGAGAAAACCTCTTAAGGTCTTGGTCCAAGTCAACACAAGTGGAGAAGAAT
GTGGGTACTCTAATTGTCCTTTTTAATACAGTTGTGAACATGTTGGCTTGATATGCAATTTCTCAATGTGAGAGCCTCTG
GTCTTTAATTTTGAACACTGGTACGCAGCACTTTTTTTTTGTAGCTATTTTTAGGTGTTCGTAAGTAATCAGCTTTGCTA
GATGACAGCATATTATACCTGTCTGAGCAATGCTAGACTGGAGATATGTGGTCCTCAAACCATGTTACTGTTTTGCAGCA
AAATTTGGAGTAGATCCCTCAGGGTGTGTGGGATTAGCAAAGCATGTCAAGTTGAGCTGCCCAAATCTTGTATTTTCTGG
TTTGATGACAATTGGAATGCTTGATTACTCCTCAACTCCAGAGAATTTCAAGGTATATTCTGAAGCACAAACTTAATTGG
ACTGATATGCTTCATAGGGCTAATTTATGCTGCTTGCTGAATGCTTAGGCATTGACTAGTTGCCGGAAGGAGGTATGCAA
TGAACTTGGAATACCAGAAGAGCAGTGCGAGCTGTCAATGGGCATGTCTGCCGATTTTGAGCAGGCGGTAAGGAACATGT
TACAAGAAGATAACTCAGAGGTATACAAACTGAATAATAATGTCTAATGGTGTGTACTTTTATTTTGTGTGCGTTTATGC
AGATTGAAATGGGCAGCACAAATGTCAGAGTTGGATCAACCATATTTGGTGCAAGAGAATACCCAAAGAAGAACTAGGAT
AATTACAGGGTTTAATTGTGAGACCGTGCATCTAACAGCTGCAGTATTGGTGGTAAATATGTATCTATTTCCACCAATAT
TTACACTTCGATGTTTTACGCAAGTGCC----ATAAATAAGGATATTGTTTTGTCATGTGTCTC----CTGTTATTAAAC
ATTCAGAGAGCACTGCAATTCCAACTTC---------------CTGATTCATCAGTAGCTTCCCAATAATGTCCACATTA
TAATCCCTTATGTCAGTCGATGTTTGTGATCAGCCAGAAATCCTGACATTGTAACTGTCTGTGATGTTTCTTGGTAGCCT
AAAAGTAATGAACATATCGTTTGATTTCCATCATTATATTAACTTCTTTCTGTAACGCATCTTTTGCAT-----------
------------------------AAGGTACCAAACCACTTCAGAGCATCTCTATCCCATTCCCAATACTCACCCCCCTA
AAACAACTTATTGGGAGGCTCCCAAGAAAATTATGTTTATTAGGATGCTGTGAACTAGCGGATCCTCTAAACTGAACTCA
ATTTCTTTTGCTAGTTCACACCCCCTTTTGCATGAAATATAAATTTCAACTATAT-------------------------
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---------------------------------------------------TTTTCATATCGTTGTAGAAAAAAGAAAAG
GACAAGGAAAAAGGGATAAAAGTAACCTTTGGCCATTTCGTCGAACACCCTGTGACGCCGGCCATGGACACCACGGTGGC
AGAGGGAGGGG--GACAGGGGGAGGCCGAGAGGTGCTCAGCCTGAGCCTCGCCTCTCGCCGACGCTCAAGTCCAAGGCTC
GG---GTCGGGAGGTGGTGGTTGCCAGCGTGGTCCGGGCGT-----------------GGAAAGAGCAACAATAGTTTTA
TGATTAGCAAATGTTACTCGTGCT--------------------------------------------TTGCTTTAGCGT
AGCAATTCGTCTAGCAAACCATGTACAGTAGTC---ATTTCTCTATGGTCACTGGGCATTTCATGGTTCCTGGAGAATTT
CATAAACTTGGGAGAAAAGCTTTTGCTCACAGCTAATCTGCCTATTTTTAATATCCCATTCCTTCCCCTTCATAAGATGT
>chr1D_719
ACAATTTCA-----------------------------------------------------------------------
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---------AGTTTCGGATCGGAGAACAAACAAATACGCAAACATTG-TTGTTGTAAAAGATCCCTCAGCTTCAACCAAA
TGATGAAGTCGCTTTACAATTCCGCGAACCGTCTAGAATTCCAACATCGAGCTCTCATTTCCTCGGAAAATAGATCAGGG
GGAAAAAAAGTTAACCACACGAGGAGCCACACACGACTGTAACACATATAGGCGGCTCCCACCAACCACGGCGACGGCGG
CAGCGGCCACGGAGGAGGGCAGCGGATCAGCGGCGCCGGCGATGGCGTCCGTAGCGGCGGTGGAGGGCGCGGCCGCGGCG
CTCCGTTCGGTGCTGTCGCGCGCGCAGCAGGCGGCGGCGCGGGCGGGCCGCGCGCCGGAGTCGGTGCGCGTGGTGGCGGT
GAGCAAGACGAAGCCCGTGGGCGTCATCCGCGGTGTGTACGACGCCGGCCACCGCTGCTTCGGCGAGAACTACGTCCAGG
AGCTCATCGACAAGGCCCCCCAGGTTGTACCCCCAGCCAAGAGGCTCGAAATTTTTATCCCCCTTTCTGGCTGCGTGAAT
GAACTTCTGATTTGGAACGTGAATGGAGAACAAGTCGCTAAGTGATCTCATTCCAGAGTTATCACCCATGTACAGTTAGC
ATTTGGGCTGGGGGGTCAATAGGTGCTCATTATTCGTACGCCTTGTATACCGCAGATGAATTATGCCATGCCAGAAAATA
TTGGAATTGACGAGCA----------------------------------------------------------------
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-------------------------------------------------------------------------------A
TAGGAATTTTTACCAACAGGTGAAACTGAATGTAGATATTCTATTGGTCATTCTGGTTAATGGAACCGGGGAGAGGCCTC
CCTGTTCTTCTAA---AAAAATAAAATAACCATCTTTATAGGAGAATTT--ATAAGGGTTGAAATCCTACAAAATTCCTG
TGATTCAAATAGGCCCTAAATATATGAAGAC-CATCTGAATGTCCATGTTCGCTTTGTTTGCTATCCTCTCTCGATGTTA
CGCAGGAAT-------------------------------------------CTTGGTTCGCACCAGAGGGTACAAACAT
ATCCTGTGTAGAGGTG------GAACATCAGACATTACTTCA-TATAACCAACCAATATTCGAAGATTTGGCCATATTTT
CCCAGCAATTGACAATTTTCCACTCTTAATGATTTCGGAAATGTTCCAAACAGTTAAATTGCTATACTTTCATGGTGCAG
GGCTT-----GAACTATGTTTCATAGTCCGTAAAATCAGTGATCTAATTCTTTTCAGTCATTTAGTTGTCTGAGCAAGTG
TTCTTCTTGTTGCAGCTTCCGGAGGATATTGAGTGGCACTTCATTGGGAACCTGCAGAGCAACAAAGCCAAAGCCCTGCT
AGGTTAGTGTCTTCATTCTTGTTTGGATATTCTGGCAGACACAAGTCTTCTCAACTTTCGATTTTCAGTTGCTTAGGTTT
GCCGCTCC-----TAAATAGTTATATATTACTCACACTACACTTATTTTTATCTTGCCCTGTATGATTTGCCCTAAATAA
GGTTTTAGATAGCAAACATATGCAATAAATTAGGAGTATTTACAC---AATGTGGCTTGGTGTTGACAAATGCTTG----
----------AGTCTGGTGTCTTGGCTCAAGAGACGGTTAAGTACTAGTTACTTTATTCTAGAATAATTGGCTGGTTTG-
GTTTTGTATTGCGGTGTGCGAGCTCTGTCTGTAAACTG-TTTCTCTTTTAATGAATGACAGAGCTCATGTTTCATCTATA
AAAAATTAGAGACATTCCTCTTTTACTTAATATATATGTGTTCACCTCTGTACACAAGTTCATACCTGATATCTTCTCTG
CTTTATTGCTCACTATTGAGCTAATTTTATTCTTCTTCTTCTTAACCTACAGCTGGTGTACCAAGTCTTGACATGGTTGA
GAGCGTAGACGACGAGAAGGTATATGAACAATTTATGTTGTCTCGTGGTTTATTCGACTGCAGTTTTGTTCTAGTTTAT-
----------------------------------------------GTTGTCTTCTTAAGGGTATATTTTTGCCTAGTCA
AGAAAAAGTATG-TTTCCAGGC----------------------------------------------------------
----------------TTAGCTTTATTCTTATCGTATTTTGCATAATAATATTTTATTGTGCCACTAGGCCTTGGAAAT-
-----------GTGTTGGCATCTTTCTGGG---TTGTTTTCTCAAGAAAAATGCAAAGCTTGTCTCTCTC---CATTCAT
CTTGTTGCAAGACCAGGTTCTCACCTGTGCATCTGTAAC-AGGTTGATTCTAATATTTGTTTCTTTTTTCAGATCGCAAA
TCGTCTTGATCGGGTGGTAGCTGATTTGGGGAGAAGGCCTCTTAAGGTCTTGGTCCAAGTTAACACAAGTGGAGAAGAAT
GTGGGTACTCTAGTTCTCTTCTTTAATACAGTTGTGAACACGTTGGTTTGATACACAATTTCCCAATGTGAGAACCTGTG
GTCTTTAGTTCTAAACACTGGTATGCAGCACATTG--TTTGTAGCTACTGTTAGGTGTTCATTAGTAATGAGCTTTGCTA
GATGACGGCATATTATACCTGTCTGAGCATTGCTAGATTGAAGATATGTGGTCCTCAGACCCTGTTACTATTTTGCAGCA
AAATTTGGAGTAGATCCCTCAGGGTGTGTGGGATTAGCAAAACATGTCAAGTTGAGCTGCCCAAATCTTGTATTTTCTGG
TTTGATGACAATTGGAATGCTTGATTACTCCTCAACTCCTGAGAATTTCAAGGTATATTCTGAAGCACAAATTTAATTGG
ACTGATATGCTTGATAGGGCTAATTTATGCTCCTTGCTGAATGCTTAGGCATTGACTAGTTGCCGGAAGGAAGTATGTGA
TGAACTCGGAATACCAGAAGAGCAGTGTGAGCTGTCAATGGGCATGTCTGCTGATTTTGAGCAGGCGGTAAGGAACACGT
TACAAGAAGATAACTCAGAGATGTACAAACTGAATGATAATGCCTAATGATGTGTACTTTTATTTTGTGTGCGTTTATGC
AGATTGAAATGGGCAGCACAAATGTCAGAGTTGGATCAACCATATTTGGTGCTAGAGAATACCCAAAGAAGAACTAGGAC
AATTACAGGGTTTTACTGTGAGACCGTGCATCTAACAGCTGAAGTATTGGTGGTAAATATGTATCTATTTCCACCGATAT
TTACCCTTTGATGTTCTACACATGTGCCATAAATAAATAAGGATATTGTTTTGTCACTGTGTCTCCTGCTGTTATAAAAC
ATTCAGAGAGCACTAGAGTTCCAACTTCTATTATTGTTTCTACCTGATTCATCAGTAGCTTCCCTAT-ATGTCCACATTA
AAATCCCTTATGTTAGTCGATGTCAGCGATCAGTCAGAAATCCTGATATTGTATTGTT-TGTAATGTTTCTTGGTATCCT
ATAAGTAATGAACATATCCTTTTATTTCCATCATTATATTAACTTTTTTTTAACTCATATTTTGGTAAGGCATCACATAC
CTTTGAATTTGGTAGTTCCAGGAAAAGGTACCAAGCCACTTCAGAGCATCTCTATCACATTCCGTATACTTGCCCCCCAA
AAACAGCTTATTGGGTGCCCCCCAAGAAAATTCTGGGTATTAGGTTGCTGTGAACTAGCGGACCC---------------
--------------------------------TGAAATATCAATTTCAACTATATTAATTTACAGCAGTACCTGACAAAA
CGTCTTATACAGTGGGGAGATGGACACCTCGCCCAGCCTGGTAGAGAGACTCATTATTTCTGTAGCGCAAGCATTACCCA
CATACATTATGGGTGTGTTTAAACGACCCTTCTCTGTTTGCGGAGTTTCTATTGGGGGTCATCAAAAGGTAAACGGAAAG
TTCATTGGCGTGTTGGGTTGTTCTAACTAAATTAATTAGCACATCTTCAGCAAAACGTCTACACATCATATAAAATAAAA
TAAAAATATTTTAATCAATAGTATTAATCTGGTGACCCATCGGGCGACCCACGGGTAGAACCTTGTGCCCATACCATACC
CATGACTAATCGGGTTACCCATCGGGCTTACCCATCGGTTAATATAATGACCCATACCCTACCCATTAGGGTCGGGTGCC
CATGGGCGCGGCCGCCCATGGGTGAGATTGCGGGGTTGAGGTACTACCCCGAGGGAAAGCTCGAAGATACAATGTTTACC
GGGAATGCATCATCATCTTGGCAGGCGATTAGCTCCGGGCTGGAGCTCTTGAAGAATGGCTTGGTATGGAGAGTTGGGAA
CAACAGAAGCATTCGAATCTGGAGGGATAATTGGATTCCCCGTCCGTATTCGTACAAGCCCATTACCTTGCAGGGAAGAT
GTCGTATCAGGTTTGTGTCTGATCTGCTGAATGACAACGGGTCTTGGAATACTAGACTGCTAGAGGAATATTTTGTTCCG
GCTGATGTTACTGAGATTATGAAAATTCGAGCCTCACCACAACTGGAGGATGACACGCTAGCATGGGGGCATGGGAAAGA
TGGACTGTTTACAGTGAAGAGTGCATATCAACTTGCTTTCGATGAGGCTCATAGGGACACTGTCACCGGATCAAGTACTA
GGCCGGAGCCCGGAGGGGTCATGTCCTTGTTGGAAAGTGATCTGGTCGAGCAATGTCCCACCCTCAGTCCGAAACTTTGC
GTGGAAAACTGCGACGAATGCCTTGCCAACTCGTCAAAAGAAGCACAGTAGGGGATTGGTGATAGATGATAGATGCCCAA
TTTGTGCCATGGAGGCCGAGGACAATTTCCACCCCCTTTGTCGTTGTACTTATGCTCTTGACTTGTGGGCAACTATGTCG
GATGTACGGAACCTCCCTGATCTTGCCTCCATTCGGAGCAGTGGGAAATAATGGCTGCTGCACATGCTTGATCCGCTGCC
TGAAATTGGACGTTGCATGGTTCTCATGACCTTCTGGAGAATTGGGCACATTCGCAATGAAGTAGTGCACCATAAACCTG
CACCTCCTAAGGAAGCTTCTAAAAGGTTTTTGGTAAGTTATTTGAATCCTTGATAGGCCCGAAGATCGATCTCACCTCTG
ATCCGATTAAAGAGAAATTGCTAGTGACATATGATACAACTTTGAAAATCCCACATCTGATAAAGGATGCAGCTCCCCCT
CTAGTGTGGTGTCCGCTAACGCCATGATGGGTGAAACTGAATACCGATGGGTCATTTGCAGAGGATGGCACGGCTGGAGC
TGGTATGGTGCTGCGAGATGATAGAGGTCACATTATTTACTCAACGTGTAGACAACTCCTCTCTTGCCAGGAAGCACTTG
AAGTTGAACTTTGTGCTTGCATGGAAGGACTGTCTTTTGCCATGCAGAGGAGTGACTTGCCAATTATAGTTGAATGGACT
CTGTCGTCGCTGTCAAGCTGATTCAAGCTTCGGATCTTGATAGATCGATTTATTCTTCTATAGTTAGAGATTAGGCACCT
TATGTCTCTTCGTGATTCCTGTGTTACTCATAGAAATTACATTCAAAATAAGGTTGTCGATAGCTTAGCTAAATTTGCTA
GATTAGAGGGCAGAACAATGACCTGGATTGGTTCTGAGCCGATAGATTCTTTAAAGCTTGCCAAAGCTGATTGTTCAGAC
AGTGTAATTTGAGTAATGCAAGAGTTTACTCGCAAAAAAACAAAAAAATTATTTTCACATTATTGTAGAAAAAAGGCTTT
----------------------------------------------------------------TGGACACCGTGGCGGG
GGGAGCTCGGCCTGATC-------------------------------------CTCGCTGATGCTCGAGTTGAAGGCTC
GG---CTCAGGAGGCAGCGGTTGCCGGCTTGGCGTGGGCGCGGGAGGTGGCGGAGCAGGGAAAGAACAACAGTAGTTCTA
TTATTAGCAAATGCAGTGCTCGACCTTGCATCTGTTTGACGTATCTTTTACTCAACCCGTGCTCGTGCTTGCTTTAGCGT
AGCAATTCGTCTAGCAAATCATGAAC------------------------------------------------------
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>chr1A_824
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-----------------------GCGAACCGTCCAGAATTCCAACCTGGAGCTCTCATTTCCTCA-AAAATAGATCAGGG
GAAAAAAG-GTTAACCACACGAGGAGCCACACACGACTGTAACACATATAGGCGGCTCCCACCAACCACGGCGACGGCGG
CAGCGGCCACGGAGGAGGGCGGCGGATCAGCGGCGCCGGCGATGGCGTCCGTGGCGGCGGTGGAGGGCGCGGCCGCGGCG
CTCCGGTCGGTGCTGTCGCGCGCGCAGCAGGCGGCGGCGCGGGCGGGGCGCGCGCCGGAGTCGGTGCGCGTGGTGGCCGT
GAGCAAGACGAAGCCCGTGGGCGTCATCCGCGGCGTGTACGACGCCGGCCACCGCTGCTTCGGCGAGAACTACGTCCAGG
AGCTCATCGACAAGGCCCCCCAGGTTGTACCCCCAGCTGAGAAGCTCGAAATTTTTATCCCCCTTTCTGGCCGCGTGAAT
GAACTGCTGATTTGGAACGTGAATGGAGAACAAGTCGCTTAGTGATTTCATTCCAGAGTTATCACCTATGTTCAGTTAGC
ATTTGAGCTGGGGTTTCAATAGGTGCTCATTATTCGTACGCCCTGTACACCACAGATGAATTAGGCCATGCCAGAAAACA
TATGAATTGATGAGCA----------------------------------------------------------------
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-------------------------------------------------------------------------------A
TAGGAATTTTG-CCAACTGGTTAAATTCAATGTAGATATTCTATTGGAATCCTGTACTATGTGATCCGTGGGAGAAATTC
TAAGGTTTATGGTCCTAAAAAACAAATAACCACCTTTGGAGGAGAATTT--ATAAGGATTGAAATCCTACAAAATTCCTG
TGATTCAAATAGGCCCCAAATATATAAAGAC-CATCCGAATGTCCATGTTCGCTTTGTTTGCTATCCTCTGTCAATGTTA
CGCAGGAAGCTTGGTTCGCACCCGCTATCTTCTGGCAATGTTATGCAGGAAGCTTGGTTCGCACCAGAGGGTACAAACAT
ATCCCGTATAGAGGTGTATGCCGAACATCAGACATTACTTCA-TATAACCAACCAATATTCGAAGATTTGGCCATATTTT
CCCAGCAATTGAAAGTTTTCCACTCTTAATGATTTCGGAAATATTCCAAACAGTTAAATTGCTATACTTGCATGGTAGTG
CAGGGCTTGAGAACTATGTTTCATAGTCCGTAAAATCAGTGACCTAATTCTTTTCAGTCATTGAGTTGTCTGAGCAAGTG
TTCTTCTTGTTGCAGCTTCCAGAGGATATTGAGTGGCACTTCATTGGGAACCTGCAGAGCAACAAAGCCAAAGCCCTGCT
AGGTTAGTGTCTTCATTCTTGTTTGGATATTCTGGCAGATACAAGTCTTCTTAACTTTCGATTTTCAGTTGCTTAGGTTT
GCCGCTCT-----TAAATAGTTATATATTACTCACACCAC--TTATTTTTATCTTGCCCTGTATGATTTGTCCTAAATAA
GGTTTTAGATAGGTAACATATGCAATAAATTAGGAGTATTTACAGAATAATGTGGCTTGGTGTTGACAAATGCTTG----
----------AGTCTGGTGTCTTGGCTCAAGAGATGGTTAAGTACTAGTTACTTTATTCTAGAATAATTGGCTGG-TTTC
GTTTCGTATTGCGGTGTGCGATCTCTGTTTGTAAACTGTTTCTTCA-TTAATGAATGACAGAGCTCATGTTTCATCTATA
AAAAGTTAGAGATATTCCTATTTTACTTAATATAT--GTGTTCACTTCTGTACACAAGTTCATACCTGATATCTTCTCTA
CTTTATTGCTCACTATTGAGCTAATTTTATTCTTCTT------AACCTACAGCTGGTGTACCAAGTCTTGACATGGTTGA
GAGCGTAGACGACGAGAAGGTATATGAACAGTTTATGTTGTCTTGTGGTTTATTCGACTGCAATTTTGTTCTAGTTTAT-
----------------------------------------------GTTGCCTTCTTAAGGGTATATTTTTGCCTAGTCA
AGAAAAAGTATGTTTTCCAGGC----------------------------------------------------------
----------------TTAGCTTTATTCTTATCGTATTTTCCATAATAATATTTTATTGCGCCACTAGGCCTTGAAA---
----------TGTGTTGGCATCTTTCTGGGTTTTTTTTCTCTCAATAAAAATGCAAAGCTTGTCTCTCTC---CATTCAT
CTTGTTGCAAGACCAGATTCTCGATTGTGCATCTGCAACGAGGTTGAATCTAATATTTGTTTCTTTTTTCAGATCGCAAA
TCGTCTTGATCGGGTGGTAGCTGATTTGGGGAGAAAACCTCTTAAGGTCTTGGTCCAAGTTAACACAAGTGGAGAAGAAT
GTGGGTACTCTAGTTCTCTTCTTTAATACAGTTGTGAACATGCTGGCTTGATACGCAATTTCTCAATATGAGAACCTGT-
GTCTTTAGTTCTGAGCACTGGTACGCAGCACATTG--TTTGTAGCTACTGTTAGGTGTTTGTTAGTAATGAGCTTTGCTA
GATGACGGCATATTATACCTGTCCGAGGATTGCTAGGCTGAAGATATGTGGTCCTCAGACCCTGTTACTATTTTGCAGCA
AAATTTGGAGTAGATCCCTCAGGGTGTGTGGGATTAGCAAAACATGTCAAGTCAAGCTGCCCAAATCTTGTATTTTCTGG
TTTGATGACAATTGGAATGCTTGATTACTCCTCAACTCCAGAGAATTTCAAGGTATATTCTGAAGCACAAACTTAATTGG
ACTGATATGCTTCATAGGGCTAATTTGTGCTGCTTGCTGAATGCTTAGGCATTGACTAGTTGCCGGAAGGAGGTATGCGA
TGAACTTGGAATACCAGAAGAGCAGTGCGAGCTGTCAATGGGCATGTCTGCTGATTTTGAGCAGGCGGTAAGGAACATGT
TACAAGAAGATAACTCAGAGATATACAAACTGAATA-TAATGTCTAATGACATGTACTTTTATTTTGTGTGCGTTTATGC
AGATTGAAATGGGCAGCACAAATGTCAGGGTTGGATCAACCATATTTGGTGCAAGAGAATACCCAAAGAAGAACTAGGAT
AATTACAGGGTTTTATTGTGAGACCGTGCATCTAACAGCTGCAGTATTGGTGGTAAATAAATATCTATTTCCACCGATAT
TTACACTTCGATGTTTTACGCAAGTGCC----ATAAATAAGGATATTGTTTTGTCATGTGTCTC----CTATTATTAGAC
ATTCAGAGAGCACTGGAATTCCAACTTC---------------CCGATTCATCAGTAGCTTCCCAATAATGTCCACATTA
AAATCCCTTATGTCAGTCGACGTTTGTGATCAGCCAGAAATCCTGATATTGTATTTGTCCGTGATGTTTCTTGGTAGCCT
AAAAGTAATGAACAAATCCTTTGATTTCCATCATTATA-TAACTTCTTTTTGTAACGCATCTTTTGCAT-----------
------------------------AAGGTACCAAACCACTTCAGAGCATCTCTATCACATCCCCAATACTTACCCCCCAA
AAACAACTTATTGGGAGGCTCCCAAGAAAATTCTGTTTATTAGGAGGCTGTGAACTAGCGGATCATCTAAACTT-----A
ATTTCTTTTGCTAGTTCACACCCCCTTTTGCATGAAATATGAATCTCAACTA----------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------TATTTTCATATCATTGTAGAAAAAAGAAAAG
GACAAGGAAAAAGAGATAAAAGTAACCTTTGGCCATTTCGCCGAACACCCTGCGACACCGGCCATGGACACCGCGGGGGG
AGGCGTAGAGG--GAGC-------------------------------------CTCGCCGACGCTCAAGTCCAAGGCAA
CAATAGTCGGGAGGTGGCAATTGCC-------------------------------------AGAGCAACAATAGTTTTA
TGATTAGCAAC----------------------GTTTGACGTATCTTTTAGTCAACTGTTACCCGTGCTTGCTTTAGCGT
AGCAATTCGTCTAGCAAATCATGTACATCTGTTATTATTTCTCTATGGTCACTGG-CATTTCATGGTTCCCGGAGAATT-
CATACACTTGGGAGAAAAGCATTTTCTCACAGCCAT--------TTTCTAATATCCCATTCCTTCCCTTTCATAAGATG-
>SNPs
S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSS--------------SS-S-S---------S---SS-SSS----------SSSS--S-S-S-------S---
----------------------S-----------------------S-----S---------------------------
--SS--------------------------------------------------------------S-------------
--------------------------------------------------------------------------------
-----------------------------------------------------S--------------------------
--------------------------------------------------------------------------------
-------------------------------------S--S------S---SS---S---------------SS------
-S---S------S--------S----SS---SS--S---S---S-----S-------------SS----S--SSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-
---------S---------S-------S---S--------S----------------S-----S---S---S-------S
--------S-S---------------S-S---SS-S-------S-----SS-----S-----------S-------S---
---------S-S---SS---S-SSSSS--SSS--------S--S---S---S-----------S----------------
-----------------------------------------------S-------------S---------------SS-
-------------------SSS--------------S---SSS---------S--------S-S---S-----S-----S
----S--SS--------------------S----------S----S------S------S-S---------S--------
-----------S---------SS-----S--S-S-S----------------S--------S---------S-SS-S---
-----------------------------------------------------------------------------S--
------S-----S-----------S--------------S----------------------------------------
SSSSSSSSSSSSS-----SS--------------S-----S---S-----------------------------------
-----------------------------------------S------S------S---------SSSSSSSS--SSSSS
SSSSSSSSSS----------S--S---S----S--S-------SS---------------S----S-----S--------
------------S------S-----------------S-----SS---------------------S-----SSSSSSS-
SSSSS-------------------------SSSS----------------------------------------------
----------SS-------------S--SS----------------------------------S---------------
------------S-------------SS----------------S----------S-----------S-SSSSS----SS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------SS----------S-S----
-------------S--S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSS-----------SS----S------S-S---------------------S--------------S
SSSSSSSSSS------S----SS--S-SSSS--------------------------------S-----SSSS-----S-
-------------------S-SS--SS-------S---S---S------S------------S-S---------------
------------------------------------------------------------S-------------------
------------S--S--S-S--------------------------------S-------------------S---S--
-------S--S--------------------S--SSS----------S-S------------S------S----------
------S----------------------S----------S----------------S---S-------S----------
-----------------------------------------S--------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------S-
---------------------------------------------------S----------------------------
--------------------S----------------------------S------------------------------
--------------------------------------------------------------------------------
-------------S-------------------------------------------------------------S----
--------------------------------------------------------------------------------
---------------S----------------------------------------------------------------
S---------------------------------------------S------SS-------------------------
------------------S------------------------------S------------------------------
--------------------------------------------------------S-------------S-------S-
--------------------------------S----------------------------------------SSSSSS-
----------------------------------------S---------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------S------------------
-------------S--------------------------S-----------S---S---------------S---S--S
--SS-S---------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------------
-----------------S-------S--S---SSS-----S---------------------------------------
-------------SSSSS-SS-SS--------------------------------------------------------
------------------S--------SSS--S----------------------S--------------S--------S
----S---------------S---S--------S-SSSSSSSSS---S-------------------S-----------S
>forward_847
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---------------------------ACCGTCCAGAATTCCAACCC---------------------------------
--------------------------------------------------------------------------------
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>reverse_2144
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---------------------------------------------------------------TGATGTGGCCGTATTTC
CCC-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>forward_1324
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------------------------GGGAAACGGGTTGCTGAGTA------------------------------------
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>reverse_2602
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-----------------------------------------GCACGATGTGGTTTGGTGTT-------------------
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>forward_2168
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--------------------------------------------------------------------TGGCCGTATTTC
CCCAACAG------------------------------------------------------------------------
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>reverse_3802
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-----------------------------------------GCATGTCAAGTTGAGCTGCC-------------------
--------------------------------------------------------------------------------
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>forward_2489
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---------------------------------------------------------------------TGCTTAGGTTT
TGACGCTGC-----------------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_4052
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---------------------------------------------------CGATTTTGAGCAGGCGGTAAG--------
--------------------------------------------------------------------------------
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>forward_3632
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------------GAACACTGGTACGCAGCACT------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_7136
--------------------------------------------------------------------------------
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---------------ACTCGTGCTTTGCTTTAGCG---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
