>input_sequence_24366
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--------------------------ATGGACGGAGAGCAAGGTCGGCAGCGGCCGGACTCCGGCAAGAACCTCATAAAG
ATCCCGTCCTACCAAGAGGTCTTCGGTAACGGAGCCGCTGCCCCCTCCTCCTCCTCGACGCCCCCCTCCTACAACCCTCC
TCTCCCCAGCGCCGCCGCTGCCGCCGCCGGC---TCGTCGTCGTCGTCGTCGTTCTCCGAGGCCTTCTCCTTCCTCAAAT
CCTCCGAGTTCTACTCCCCTCCCCCGCCGCCTCTACAGCCATCCACCGCCCCTAGGTACCGTCTCCCTCGCCCTCTC-TC
GGATTCTCTCAGCGAGTCCTCACCTCTCTAGGTTCGGTTTCTTTGAACAGGCCGCCTCTGGCTGGCGCCACCACTACGCC
GTCCCAGAGCAAGAACGCCATTCTCGTGAGCAATAGGCAGGTA-TGGAGTGTGGTGATGGTTTGGTACTTCTCTTCTTAT
T-AATCAATCTTCTCCCCTTTCTTTTGTGTTAAATTTGGAGTCTTTGTTCGTTTCTCACTTGGCAGAAAGGGAACCCATT
ACTGAAGCACATCAGGAATGCGAGGTGGACGTTCGCTGACATCGTTCCGGACTACGTGATTGGGCAATCATCATGTGCAC
TCTACATAAGGTTCTCGCTCTGTCATTCTATTTGTTGGTTTCTTTTTCTCTACTCGTTTTGTATTAGAAGAACAATGCCA
AGAAGGCACAAAGTAAAACTCAAACAAAAACAAGGATAAATAAACAAACAGAAAGAAGGATGACAGGGAATCG-AAAGTA
AAGCCTAAACTAACTAGGCCATTCCACCAAAAACAGAGAGGTGGCGAGGGACACCCTCTATTTTGTTTGCTGGTTTCACT
GCG------TGTATTTTTACCATTGGGGGCCAATACTAGAACCAGAGATACGGGAAAGTACTGTGCATCTAACGGATACA
TTTCACTAGGGGTGTTCGAAAACGGGGTTTACTGCCTGCTTCCCTTTTTCATGGGTTCATGCGGAACCGTTATTTGAACA
CCCTAGCATTTCATATAGTGCACTGCACT---------ACCAATCTATTAGACAACAAGTTTGGAGCAGTAGTACTGCGA
TCTTAGTGATCTGCGTCACCTGTTGCTAGTAAAGGTTTTGTGCCCCGGTGTGTACCGTGAGGTAGTGGCATGATTCTTAC
CATGTAACTTTGGTCGATGCAGTCTCAGGTACCATCTTCTTCACCCAGACTACTTGTACTATCGGATAAGGGAGCTCCAA
AAGAATTTCAAACTCCGTGTCATCTTGTGTCATATTGATATTGTGAGTTTGAATCATCTGACCAACATATTTTGCTTTAA
TTGGGAAATGAAGTTTGAGACATCTCAAAAAGGTTATTTATTAATCCATGTTCATATAATTCATGATCAGGAAGATGTAG
TAAAGCCTTTACATGAAGTCACAAGGACATCACTGCTGCATGACTGCACCCTTCTGTGTGGTTGGAGGTATTATTCAGAA
CATTCTTATATGCTGGGATTATGCAATACCATGTTTAATTATGTTCCCCTTGTTTTAATTCTGCACTGTTGCA-------
--TATAAATGTAATTACAAGC--------ATAAGA---TCTTGTTTAGGTTCCTTTGCTCTGAA-TAAAACTGCGACCGT
GCACTGCTTAGTGATCTCATTATCTAATACTTGTTGAGCATTTTGCATACGAAAATTAGATCCAAGAA--------TGGA
TGCATGTACATGTGAAAGAAATGCTAATGGCTCTCCAACATACTAACTGGAAAGTTTTAGTAACTACATGATGATGTACT
GATTTGGTTGCAAAGGCTTACTAATGTGCTCTTTGACCAAACTGTTCTCTCTTGTAGTCTGGAGGAATGTGGCAGGTACT
TGGAGACTATTAAAGTGTTTGAAAACAAGCCAGCTGACAGCATTCGCGAGCACACAGATAATGATTATTTATCTCGGGTA
TGCACCCTTACAGTTGCAACATGGTTTCATCTATGTATCTCATTAACTGGACTTGGACGGATTATTAAGTATGTTGGGTA
ATTAAGATTTGCG-----GAAATCCCGCAACTTCAGCAATACTCAGTACTGCTTTTTCATTTATCAAGTTCCAAGCATTG
CAAGTGG-------TTTCAATATAGAAGTTATATCGTCCTTTTGGGCTGACTATTAGAAGTTGACTCATTATTTG-----
---------------------CTGTAACAACGATCATTATTTGGTGGTTTCAATACTCAGTTATATCGCCCTGTTCGGAG
TGTCCGTTGTGTTAACAACGATCACTATTTGGTGTATTACTCATTTATGCTGTGGTTCTGGTTTTGGCAGTTCACTCATG
CTCTTACATCCATCCGGCGTGTTAACAGAACAGATGTTATCACACTTGGTTCGTCCTTTGGGGTAAGATGGAATAAGAAC
TGGAACTATTACATTGTCTTCCATAATGTATTGGAAATTGTTGTGTACAGCTTTATTACTGTAAAAATGGTATCATTTCA
CCTGACGAGATCACCCGTCAAAC------AATTCACAATATAATTACATGCATCGGGTCTTGCATTTGCAGTCACTTTCC
CGAATCATGGATGCTTCTATGGAAGAACTAGCTCGTTGTCCAGGAATTGGCGAACGGAAGGTACCACTTCAAGCCTCCAA
TTTTATTTGTCATGGTTCATGTTGTTACCCAAC-TTTTTTTTTCCAATCATCCCATAGATATAATAAGCTACAACCATGT
GCCGTGTTTGCATTGCTCTACTTTTCCGCTTAATAACATGAAAGGCCATGTTTTGCTAGGCTAACATGTAGAGTTTGTCG
AATGTAGGTAAAGCGACTTCATGATACCTTTCATGAGCCATTTAAACGAGTTACGCCCCGCCCAAACCTCGTAGTACCTG
ATACTCCCGACAGAGAGAAAGCGTCTGGTCAGCCTTCATCGACCAACGATGGCACACCGGAAAAGCCAGGCACTTCCAAG
AACAAGAAAGGCCCTGATGTCAAATCGGCCCTTACTGCTGCATTTGCGAAGTACTCAGAAAAGATCCGCAGTCAGGGCCA
CGAGGCGGCCCATGAGGGTGGTGAAGGTCCTAGCAGCTCAACCATGGAAGGTGACAAGACAAAACAGTTAGATTAG----
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---------------------------------------------------
>chr1D_1_TraesCS1D01G185100
GTGTCACATATACAGCCACATATGTGACACACACGCGTCGCTAATTGACAATGGATCTTATGTCATATATATATACCTAA
ATAGTTGTCTCTGTTATCTCTTTTATCTTAACATGTACACATGTCGCCTCATTAAAGGCCCACCACAACATGCATGGGAT
TATTTTATTTTTCATCATTAGTTGATATCCATTACTTCTATTTATCTTAACATGCACAC---------------------
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---------------ATCCCACCTTATCACACATGCCACCTCATTAAGGGTCCACTCATCATGCATGTGATTTTTTCAAC
GTAT----TTACATCACTTATATTCAACAAATATTTTTCAACTATAATTTGGATCGA--GGAGTATGTATTTTTAGTTTT
AGTTCATGTGTTATTAATTCAATTATTCATGTTTCATACGATCAAATCACAATGAAATATATTGCAACTGATTCCCTCAG
CAAAACGAGTGGTATCATATAGTATCACATATG-----------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------TAGGAACACAA
CAGTCACAATCGCCCACCACTTCAAAAAAAAACTCATGTGCAATCTAAAGACAAGGACCAAGCCAGCCATACCAACCGCC
TGCAAAAATAATTGACACAACACACACA----CATCATTCAACAAACATCAACAATAAAACGGCT--AAAAAGTAAACAA
CTGACGCAACATTATTTTTTTAATAGGCGCAGCAAAGTTTTTCTTTTGAGATCTTTCTT---------------------
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----------------------------------------TTTTGTTAGAAACTTTTTTTTTGTTTGAGATCAGGCGCAA
CGAAGTGCTTGTCAACTTTTTCTTTTGAGGGGTCCTCAACTTCGAGTCCAAATTGGCCTCTTAGGCTCATGGGCTATCAT
CGTCATTTAATAAAAGCATCCAATATTTTGTTAGTCCATGACCGGCCCGTAGCGGGAGTCTTAACAACAGATCGAACCAT
CGCACCTAGCCCACAATAGCCTGATAGTCCCACGCTGCAGCGAGGCAGTCGGTGGTCGGACCTGCGGGTCGTCCCCTCCG
CCCTCCTTTGAGG-CCCCCGCGCGCCATGGACGGAGAGCAAGGTCGGCAGCGGCCGGACTCCGGCAAGAACCTCATAAAG
ATCCCGTCCTACCAAGAGGTCTTCGGTAACGGAGCCGCTGCCCCCTCCTCCTCCTCGACGCCCCCCTCCTACAACCCTCC
TCTCCCCAGCGCCGCCGCTGCCGCCGCCGGC---TCGTCGTCGTCGTCGTCGTTCTCCGAGGCCTTCTCCTTCCTCAAAT
CCTCCGAGTTCTACTCCCCTCCCCCGCCGCCTCTACAGCCATCCACCGCCCCTAGGTACCGTCTCCCTCGCCCTCTC-TC
GGATTCTCTCAGCGAGTCCTCACCTCTCTAGGTTCGGTTTCTTTGAACAGGCCGCCTCTGGCTGGCGCCACCACTACGCC
GTCCCAGAGCAAGAACGCCATTCTCGTGAGCAATAGGCAGGTA-TGGAGTGTGGTGATGGTTTGGTACTTCTCTTCTTAT
T-AATCAATCTTCTCCCCTTTCTTTTGTGTTAAATTTGGAGTCTTTGTTCGTTTCTCACTTGGCAGAAAGGGAACCCATT
ACTGAAGCACATCAGGAATGCGAGGTGGACGTTCGCTGACATCGTTCCGGACTACGTGATTGGGCAATCATCATGTGCAC
TCTACATAAGGTTCTCGCTCTGTCATTCTATTTGTTGGTTTCTTTTTCTCTACTCGTTTTGTATTAGAAGAACAATGCCA
AGAAGGCACAAAGTAAAACTCAAACAAAAACAAGGATAAATAAACAAACAGAAAGAAGGATGACAGGGAATCG-AAAGTA
AAGCCTAAACTAACTAGGCCATTCCACCAAAAACAGAGAGGTGGCGAGGGACACCCTCTATTTTGTTTGCTGGTTTCACT
GCG------TGTATTTTTACCATTGGGGGCCAATACTAGAACCAGAGATACGGGAAAGTACTGTGCATCTAACGGATACA
TTTCACTAGGGGTGTTCGAAAACGGGGTTTACTGCCTGCTTCCCTTTTTCATGGGTTCATGCGGAACCGTTATTTGAACA
CCCTAGCATTTCATATAGTGCACTGCACT---------ACCAATCTATTAGACAACAAGTTTGGAGCAGTAGTACTGCGA
TCTTAGTGATCTGCGTCACCTGTTGCTAGTAAAGGTTTTGTGCCCCGGTGTGTACCGTGAGGTAGTGGCATGATTCTTAC
CATGTAACTTTGGTCGATGCAGTCTCAGGTACCATCTTCTTCACCCAGACTACTTGTACTATCGGATAAGGGAGCTCCAA
AAGAATTTCAAACTCCGTGTCATCTTGTGTCATATTGATATTGTGAGTTTGAATCATCTGACCAACATATTTTGCTTTAA
TTGGGAAATGAAGTTTGAGACATCTCAAAAAGGTTATTTATTAATCCATGTTCATATAATTCATGATCAGGAAGATGTAG
TAAAGCCTTTACATGAAGTCACAAGGACATCACTGCTGCATGACTGCACCCTTCTGTGTGGTTGGAGGTATTATTCAGAA
CATTCTTATATGCTGGGATTATGCAATACCATGTTTAATTATGTTCCCCTTGTTTTAATTCTGCACTGTTGCA-------
--TATAAATGTAATTACAAGC--------ATAAGA---TCTTGTTTAGGTTCCTTTGCTCTGAA-TAAAACTGCGACCGT
GCACTGCTTAGTGATCTCATTATCTAATACTTGTTGAGCATTTTGCATACGAAAATTAGATCCAAGAA--------TGGA
TGCATGTACATGTGAAAGAAATGCTAATGGCTCTCCAACATACTAACTGGAAAGTTTTAGTAACTACATGATGATGTACT
GATTTGGTTGCAAAGGCTTACTAATGTGCTCTTTGACCAAACTGTTCTCTCTTGTAGTCTGGAGGAATGTGGCAGGTACT
TGGAGACTATTAAAGTGTTTGAAAACAAGCCAGCTGACAGCATTCGCGAGCACACAGATAATGATTATTTATCTCGGGTA
TGCACCCTTACAGTTGCAACATGGTTTCATCTATGTATCTCATTAACTGGACTTGGACGGATTATTAAGTATGTTGGGTA
ATTAAGATTTGCG-----GAAATCCCGCAACTTCAGCAATACTCAGTACTGCTTTTTCATTTATCAAGTTCCAAGCATTG
CAAGTGG-------TTTCAATATAGAAGTTATATCGTCCTTTTGGGCTGACTATTAGAAGTTGACTCATTATTTG-----
---------------------CTGTAACAACGATCATTATTTGGTGGTTTCAATACTCAGTTATATCGCCCTGTTCGGAG
TGTCCGTTGTGTTAACAACGATCACTATTTGGTGTATTACTCATTTATGCTGTGGTTCTGGTTTTGGCAGTTCACTCATG
CTCTTACATCCATCCGGCGTGTTAACAGAACAGATGTTATCACACTTGGTTCGTCCTTTGGGGTAAGATGGAATAAGAAC
TGGAACTATTACATTGTCTTCCATAATGTATTGGAAATTGTTGTGTACAGCTTTATTACTGTAAAAATGGTATCATTTCA
CCTGACGAGATCACCCGTCAAAC------AATTCACAATATAATTACATGCATCGGGTCTTGCATTTGCAGTCACTTTCC
CGAATCATGGATGCTTCTATGGAAGAACTAGCTCGTTGTCCAGGAATTGGCGAACGGAAGGTACCACTTCAAGCCTCCAA
TTTTATTTGTCATGGTTCATGTTGTTACCCAAC-TTTTTTTTTCCAATCATCCCATAGATATAATAAGCTACAACCATGT
GCCGTGTTTGCATTGCTCTACTTTTCCGCTTAATAACATGAAAGGCCATGTTTTGCTAGGCTAACATGTAGAGTTTGTCG
AATGTAGGTAAAGCGACTTCATGATACCTTTCATGAGCCATTTAAACGAGTTACGCCCCGCCCAAACCTCGTAGTACCTG
ATACTCCCGACAGAGAGAAAGCGTCTGGTCAGCCTTCATCGACCAACGATGGCACACCGGAAAAGCCAGGCACTTCCAAG
AACAAGAAAGGCCCTGATGTCAAATCGGCCCTTACTGCTGCATTTGCGAAGTACTCAGAAAAGATCCGCAGTCAGGGCCA
CGAGGCGGCCCATGAGGGTGGTGAAGGTCCTAGCAGCTCAACCATGGAAGGTGACAAGACAAAACAGTTAGATTAGCAGT
AGGAAGGAGTAGGAAGTGGCACGTGCAAATGTACTGCTGTTGTTGTAGCTGCAAAATTTGCTTCCTCTGTTTATTGCTCC
TAAACAAGGGTGAATTTTGCATTGTACTAATTGTTGTTGTAGTATAGGCCTTCCCTTTTCTCAACAAGGGGTGGATTTTG
CATTGTCATGCAGGCCTTCTCTTTCCTGTCAACACAATTTAGCCGATCTTCTCTTTT----------------TTTTTCT
ATCAGTATACGTTTCTGCCTTGGAGAACTCTCAGAGCCATCCAAAGGTACACCGGAAAATGTAATCTGTATTTTGTGACA
AACATTGCCCATGCTTCGTTGTTCTTGTTCAGCAACTGAAGCAGGCGGCTCGATTAACTTTCGTGTTTAGATTTTGAAGA
TGCGTTTGCGTACGTTTGCCTCTTCATTAGCTCAATGCTGCGTACTTTTCACACTACTTGGTACTACTTCTTGCTGCCCA
AAAATAGAACTC----TCTACTGGGCAAGTTCTGATATTGATACATTCAAAACTGGGAGCATAAGTTCAGCAAAGCTCTT
AAT-----------------------------------------------------------------------------
---------------------------------------------------------------------------CAGCG
ACAAAATTA-----------------------------------------------------------------------
--------------------------------------------------------------------------------
----------TACATGCCACTGCTGAATAAAGTACAATTTATTTATTTTGCATTCTTCTGCAAGCTGTTCGAACCAACGG
GCACCCTACACAATCTACGGGATAATCACAAATGTTTGAATGATAGGTGGGGCCATAGCAGGGGAATGCACAGTACCGCT
ATCTATGACCCACCAAAACCTATTGAATAAATTAAACCGAAAAAGAAGCTAAATAAAAACTAATATACACACTGATGGCA
ACAGGCCAAGGAGCACGTCCCCATTTTCTTCTTCTTCTTCTGACGGCGCTTATTCGGATATACATATATATATATATATA
TGTAGCTTCCGCGAGTACTGCTTCTCTTATGAAACT--CTCAGATGATGCGAAAGCTAAGTGCGGGTACCCATATCAGCT
GAACGTTTCACCTTGCTATGTTTCTTCATTGTCCTCGTCCCTAATGTCTTC
>chr1A_1
GTGTCACATATACAACCACATATGTGACACACATGTGTTGCTGATTGACGATGGATCCTATGTCC--TATATATACCTAA
ATAGTTGTCCTTGTTATCTCTTTTATCTTAACATGTACACATGTCGCTTCATTAAAGACCCATCACAACATGCATGAGAT
TATTAT---TTTCATTATTAGTTGATCTCCATTACTTTTATCTATCTTAACATGCACATTCTTGAAATATATTGCCCGTC
TTTTTTTTTTGAGCATCAGTACAGACTCAAGCGCTCATATACACGCGCATACACTCACCCCTATGAACGCATACACACAT
ATCCTACCCCTATGAGCACCTCCGAGAGACTGAGCCGGCGTATCATCTTGAGATTTACGAAGTCACCGTAGGCGTCTCGT
CGTCGACGGGAACGTCTCCTCCCACTGAAAGTGCATCGCCAAAAATCCTGAAATAAATCCAGGAATAATGCGAGCACCAG
GATTTGAACCCTGGTGGATTGGGGATACCACTGTCCACCTAACCAACTCAACCACAGGTTGATTCGCAATATATATTGCC
CGTCTTCCTTCATCAGTTTAGACTTTTGGAGCAACTGACTGGAGCATGAATTCAATATGGTATCCGAGCCAAGAGGTCTT
GAGTTCAAGACCCTGCCAACACAGTATTAAATAAAACAATTCTGCGACCCGCATCGATCCCACGTCTAAAGATTAAAATA
GTCTAGACGTGAGGGGGAGTGTTGAAATAATTGCCCGCCTCCCCATCAGTTCGGACTTTTCGAGCAACTGGCTGGAGCAT
GAATTCAATACACATATCCCACCTTATCACACATGCCACCTCATTAAGGGCCCACTCATCATGCATGTGAAT-TTTTTCT
ATGTATTATGACATCACTTATATTCAACAAATATTTTTCAACTATAATTTGGATCGAAGGGAGTATATATTTTTAGTTTT
AGTTCATGTGTTATTAATGCAATTATTCATGTTTCATACGATCAAATCATATTGAAATATATTGCAACTAATTCCCACAA
CAAAGCGCGTGGTATCATATAGTATCACATACTACCTCCGTCTCGTTGAATAAGTCATTCACGTAGTTCTAGGTCGACGA
TTTAACTATCTAAATATGTAGAAACTACATCCGTGTAAAAATCTAGTGATATATTTTTCATGACATATAACACATATTTA
ATTACTCAAATCGGTGACCTAGAACTAGCCAAATGACTTATTCATCTAGACGGAGGTAGTATGTAGGATTAGGAACACAA
CGGTCACCATCGCCCACCACTCCAAAAAAAAAATCATGTCCAATCTAAAAACAAGGACCAAGCCAGCGACACCAACGACC
TGCAAAAATAAATGACACAACACACACA----CATCATTCAACAAACATCGACAATAAAACAGCTAAAAAAAGTACACAA
CCGACGCAACAATATTTTTTTAATAGTCGCAGCAAAGTTTTTCTTTTGAGGTCTTGTTT---------------------
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----------------------------------------TTTT---------------TTTTTTTGAGATCAGGCGCAG
CGAAGTGCGCGTCAACTTCT------------------------AGTCCAAATTGGCCTCTTAGGCTCATGGGCTATCAT
CATCATT---TAAAAGCATCCAATATTTTGTTAGTCCATGACCGGCCCGTAGCGGGAGTCTT---AACAGATCGAACCGT
CGCAAGGAGCCCACAATAGCCTGATAGTCCCACGCTGCAGCGAGGCAGTCGGTGGACGGACCTGCGGGTCGTCCCCTCCC
-------TTGAGCCCCCCCGCGCGCCATGGACGGAGAGCAAGGTCGGCAGCGGCCTGACTCCGGCAAGAACCTCATAAAG
ATCCCGTCCTACCAAGAGGTCTTCGGTAACGGAGCCGCTGCCTCCTCCTCCTCCTCGACGCCCCCCTCCTACAACCCTCC
TCTCCCCAGCGCCGCCGCTGCCGCCGCCGGCTCTTT---GTCGTCGTCGTCGTTCTCCGAGGCCTTCTCCTTCCTCAAAT
CCTCCGAGTTCTACTCCCCTCCCCCGCCGCCTCCACAGCCATCCACCGCCCCTAGGTACCATCTCCCTCGCCCTCTCCTC
GGATTCTCTCAGTGAGGCCTCACCCCTCTAGGTTCGGTTTCTTTGAACAGGCCGCCTTTGGCTGGCGCCACCACTACGCC
GTCGCAGAGCAAGAACGCCATTCTAGTGAGCAATAGGCAGGTAATGGAGTGTGGTGATGATTTAGTACTTTTCTTCTTA-
T-AATCAATCTTCTCCCCTTTCTTTTGTGTTAAATTTGGAGTCTTTGTTCGTTTCTCACTTGGCAGAAAGGGAACCCATT
ACTGAAGCACATCAGGAATGCGAGGTGGACGTTCGCTGACATCGTTCCGGACTACGTGATTGGGCAATCATCATGCGCAC
TATACATAAGGTTCTTGCTCTATCATTCTATTTGTTGGTTCCTTTGTCTCGACTCGTTTTGTATTAGAAGAACAATGCCA
AGAAGGCACAAAGTAGAACACAAACAAAGACAAGGATAAATAAACAAACAGAAAGAAGGATGGCAGGGAATCG-AAGTAA
GCCTA------AACTAGGCTATTCCACCAAAAACAGAGAGGTGGCGAGGGACACCCTCTATTTTGTTTGCTGGTTTCACT
GCATCTGCATGTATTGTTACCATTGGGGGCCAATACTAGAACCAGAGATACGCGAAAGTACTGTGCATCTAACAGATACA
TTTCGCTAGGGGCGTTCGAAAACAGGGTTTACTGCCTGCTTCCCTTTTTCATGGGTTCATGTGGAACCGTTATTTGAACA
CCCTAGCATTTCATATAGTGCACTGCACT---------ACCAATCTGTTAGACAACAAGTTTGGAGCAGTAGTACTGCAA
TCTTAGTGATCTGCGTCACCTGTTGCTAGTAAAGGTTTTGTGCCCCGGTGTGTGCCGTGAGGTAGTGGCATGATTCTTAC
CATGTAACTTTGGTCAATGCAGTCTCAGGTACCATCTTCTTCACCCAGACTACTTGTACTATCGGATAAGGGAGCTCCAA
AAGAATTTCAAACTCCGTGTCATCTTGTGCCATATTGATATTGTGAGTTTGAATCATCTGACCAACATATTTTGCTTTAA
TTGGGAAATGAAGTTTGAGACATCTCAAAAAGGTTATTTATTAATCCATGTTCATATACTTCATGATCAGGAAGATGTAG
TAAAGCCTTTACATGAAGTCACAAGGACATCACTGCTGCATGACTGCACCCTTCTGTGTGGTTGGAGGTATTATTCAGAA
CATTCTTATATGCTGGGATTATGCAATACCATGTTTAATTATGTTCCCTTTGTTTTAATTCTGTACTGTTGCATTGGTTC
TTTATAAATGTAATTGCAAATTTGCAATTATAAGA---TCTTGTTTAGGTTCCTTTGCTCTGAAATAAAACTGTGACCGT
GCACTGCTTAGTGATCTCATTATCTAATACTTGTTGAGCATTTTGCATACGAAAATTAAATTCAAGAGTGGAATAGTGGA
TGTAAGTACATGTTAAAGAAATGCTAATAGCTCTCCAACATGCTAACTGGAAAATTTTAGTAACAACATGATGATGTACT
GATTTGGTTGCAAAGGCTTACTAAGATGCTCTTTGACCAAGCTGTTCTCTCTTGTAGTCTGGAGGAATGTGGCAGGTACT
TGGAGACTATTAAAGTGTTTGAAAACAAGCCAGCTGACAGCATTCGCGAGCACACAGATAATGATTATTTATCTCGGGTA
TGCACCCTTACAGTTACAACATGGTTTGATCTATCTATCTCATTAACTGGACTGGGACGGATTAGTAAGTATGTTGAGTA
ATTAAGATTTGCGGAAAAGAAATCCCGCAACTTCAGCAATACTCAGTATTGCTTTTTCATTTATCAAGTTCCAAGCATTG
CAAGTGG-------TTTCAATACAGAAGTTATATCGTCCTTTTGGGC--------------------------TG-----
---------------------CTGTAACAACGATAATTATTTGGTGGTTTCAATACTCAATTATATTGCCCTGTTCAGAG
TGTCCATTGTGTTAACAATGATCATTATTTGGTGTGTTACTCATTTATGCTGTGGTTCTGGTTTTGGCAGTTCACTCATG
CTCTTACATCGATCCGGCGTGTTAACAAAACAGATGTTATCACACTTGGTTCGTCTTTTGGGGTAAGATGGAATAAGAAC
TGGAACTATTACATTGTCTTCCATAATCTATTGGATATTGTTGTGTGCAGCTTTATTACTGTAAAAATGGTAGCATTTCA
CCCGGCAAGATCACCCATCAAACAAAAACAATTCACAGTATAATTACACGCATCGGGTCTTGTATTTGCAGTCACTTTCC
CGAATCATGGATGCTTCTATGGAAGAACTAGCTCGTTGTCCAGGAATTGGCGAGCGGAAGGTACCACTTTAAACCTCCAA
TTTTATTTGTCATGGTTCATGTTGTTACC-AACATTTTTTTTCCCGATCATCCCATAGATATAATAAGCTACAACCATGT
GTCGTGTCTGCATTGCTTTGCTTTTCCGCTTACTAACATGAAAGGCCATGTTTCGCTAGGCTAACATGTAGAGTTTGTCG
AATGTAGGTAAAGCGACTTCATGATACTTTTCATGAGCCATTTAAACGAGTTACGCCCCGCCCAAACCTCGTAGTACCTG
ATACTCCCGACAGAGAGAAAGTGTCTGGTCAGCCTTCATCGACCAACGATGGCACGCCGGAAAAGCCAGGCACTTCCAAG
AACAAGAAAGGCCCTGATGTCAAATCGGCCCTTACTGCTGCATTTGCAAAGTACTCAGAAAAGATCCGCAGTCAGGGCCG
CGAGGCGGCCCATGAGGCTGGTGAAGGTCCTAGCAGCTCAACCATGGAAGGTGACAAGACAAAACAATTAGATTAGCAGT
AGGAAGGAGTAGGAAGTGGCACGTGCAGGTGTACTGCTGTTGTTGTAGCTGCAAAATTTGCTTCCTCTGTTTATTGCTCC
TAAACAAGGGTGAATTTTGCATTGTACTGATTGTTGTTGTAGTGTAGGCCTTCCCTTTTCTCAGCAAGGGTTGGATTTTG
CATTGTTATGCTGGCCTCCTCTTTCCTGTCAACACAATTTAGCCGATCTTCTCTTTT----------------T------
------------TTCTGCCTTGGAGAACTCTCAGAGCCATCCAAAAGTACACCGGAAAATGTAATCTGTATTTTGTGATA
AACATTGCCCATGCTTCGTTGTTCTTGTTCAGCAACTGAAGCAGACTGCTCGATTAACTTTCGTGTTTAGGCTTTGCAGA
CGTGTTTA--------------------AGCTTAATGCTGCGTACTTTTCACACTACTCGG---TACTTCTTGCTGCCCA
AAAATAGAACTCAAACTCTACTGGGCAAGTTCTGACATTGATACATTCAGAACTGGGAGCACAAGTTCAGCAAAGCTCTT
AACATAAACGGGCTCTACTGCCATTCTTGGTTGTTTATTATTATCATTCAATGTAGAGCAATATCGCCAATCCATTCATT
TCCTAGTTCCTCCGCTGCAGTCTGCAACGGAGGGCTGCAAGCTGTACTCCAGGCAGGGATCAAATGATAATGCTTCAGCG
ACAAAATTATACTCCCTCCTCCCTAAATATTTGTCTTTCTAGACATTTCAAATGACTACTACATACGGATGTATGTAGAC
ATATTTTAGAGTGTAGATTCATTCACTTTGCTCCGTATGTAGTCACTTGTTGAAATGCCTAGAAAGACAAGTATTTAGGA
ACGGAGGGAGTACAAGCCACTGCTGGATAAAGTACAACTTATTTATTTTGCATTCTTCTGCAAGCTGTTCGAACCAACGG
GCACCCTACACAATCTACGGGATAATCACAAATGTTTGAATGATAGGTGTGGCCATAGCAGGGGAATGCACAGGACCGCA
GTCTATGACCCACCAAAACCTATTGAATAAATTAAACCGAAAAAGAAGCTAAATAAAAACTAATATACACACTGATGGCA
ACAGGCCAAGGAGCATGTCCCCATTTTT---TC---CTTCTGACGGCGCTTATTCGGATATACATATATATATATA----
----GCTTCCGCGAGTACTGCTTCTCTAATGAAACT--C--AGATGATGCGAAAGCTAAGTGCGGGTACCCATATCAGCT
GAACGTTTCACCTTGCTATGTTTCTTCATTGTCCTCGTCCCTAATGTCTTC
>chr1B_23
----------------------TGTGACACACACGCGTCGCTGATTGACAATGGATCATATGTCC--TATATATACCTAA
ATAGTTGTCCCTGTTATCTCTTTTATCTTAACATGTACACATGTCGCCTCATTAAAGGGCCATCACAACATGCATGAGAT
TATTTT---TTTCATTATTAGTTGATCTTCATTACTTCTATTTATCTTAACATGCACAC---------------------
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---------------ATCCCACCTAATCACACATGCCACCTCATTAAGGGCCCACTCATCATGCATGTGAATTTTTTTCT
ACGTATTATTACATCACCTATATTCAACAAATATTTTTCAACTATAATTTGTATCGGAGGGAGTATGTATTTTAAGTTTT
AGTTCATGTGCTATTAATTCAATTATTCATGTTTCATACGATCAAATCACATTAAAATATATTGCAACTGATTCCCCCAG
CAAAGCGTGTGGTATCATATAGTATCACATATG-----------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------TAGGAACACAA
CAGTCACACACCAC-------TCCAAAAAAAACTCATGTCCAATCTAAAGTCAAGGACCAAGCCAGCCACACCAACGGCC
TGCGAAAATAAATGACACAACACACACACACACATCCTTCAACAAACATCAACAATAAAACGGCTT-AAAAAGTACACAA
CCGACGCAACAATATTTTTTAAATAGGCGCAGCAAAGTTTTTCTTTTGAGATCTTTTTTGNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNGTTTTGTTAGAAATCTTTTTT---------------TTTTTTTGAGATCAGGCGCAG
CGAAGTGCGTGTCAACTTCT------------------------AGTCCAAATTGGCCTCTTAGGCTCATGGGCTATCAT
CATCATT---TAAAAGCATCCAATATTTTGTTAGTCCATGACCGGCCCGTAGCGGGAGTCTT---AACAGATCGAACCAT
CGCAACGAGCCCACAATAGCCTGATAGTCCCACGCTGCAGCGAGGCAGTCGGTGGTCGGACCTGCGGGTCGTCCCCTCCC
-------TTGAGG-CCCCCGCGCGCCATGGACGGAGAGCAAGGTCGGCAGCGGCCGGACTCCGGCAAGAACCTCATAAAG
ATCCCGTCCTACCAAGAGGTCTTCGGTAACGGAGCAGCTGCCTCCTCCTCCTCCTCGACGCCCCCCTCCTACAACCCTCC
TCTCCCCAGCGCCGCCGCTGCCGCTGCCGGCTCTTCGTCGTCGTCGTCGTCGTTCTCCGAGGCCTTCTCCTTCCTCAAAT
CCTCCGAGTTCTACTCCCCTCCCCCGCCGCCTCCACAGCAATCCACCGCTCCTAGGTACCATCTCCCTCGCCCTCTCCTC
GGATTCTCTCAGTGAGGCCTCACCCCTCTAGGTTCGGTTTCTTTGAACAGGCCGCCTCTGGCTGGCGCCACCACTACGCC
GTCCCAGAGCAAGAACGCCATTCTCGTGAGCAATAGGCAGGTAATGGAGTGTGGTGATGATTTGGTACTTTTCTTCTTA-
TTAATCAATCTTCTCCCCTTTCTTTTGTGTTAAATTTGGAGTCTTTGTTCGTTTCTCACTTGGCAGAAAGGGAACCCATT
ACTGAAGCACATCAGGAATGCGAGGTGGACGTTCGCTGACATTGTTCCAGACTACGTGATTGGGCAATCATCATGTGCAC
TCTACATAAGGTTCTTGCTCTATCATTCTATTTGTTGGTTTCTTTTTCTCGACTCGTTTTGCAGTAGAAGAACAATGCCA
AGAAGGCACAAAGTGAAACTCAAACAAAAACAAGGATAAATAAACAAACAGAAAGAAGGTTGGCAGGGAATCGAAAGTAA
GCCTA------AACTAGGCTATTCCACCAAAAACAGAGAGGTGGCGAGGGACACCCTCTATTTTGTTGCTGGCTTCA---
----CTGCATGTATTGTTACCATTGGGGGCCAATATTAGAACCAGAGATACGCGAAAATACTGTGCATGTAACAGATACA
TTTCGCTAGGGGTGTTCGAAAACGGGGTTTACTGCCTGCTTCCCTTTTTCATGGGTTCATGTGGAATCCTTATTTGAACA
CCCTAGCATTTCATATAGTGCACTGCACTACCAATCCTACCAATCTATTAGACAACAAGTTTGGAGCAGTAGTACTGTGA
TCTTAGTGATCTGC-----CTGTTGCTAGTAAAGGTTTTGTGCCCTGGTGTGTACCGTGAGGTAGTGGCATGATTCTTAC
CATGTAACTTTGGTCGATGCAGTCTCAGGTACCATCTTCTTCACCCAGACTACTTGTACTATCGGATAAGGGAGCTCCAA
AAGAATTTCAAACTCCGTGTCATCTTGTGCCATATTGATATTGTGAGTTTGAATCATCTGACCAACATATTTTGCTTTAA
TTGGGAAATAAAGTTTGAGACATCTCAAAAAGGTTGTTTATTAATCCATGTTCATATACTTCATGATCAGGAAGATGTAG
TAAAGCCTTTACATGAAGTCACAAGGACATCACTGCTGCATGACTGCACCCTTCTGTGTGGTTGGAGGTATTATTCAGAA
CATTCTTATATGCTGGGATTATGCAATACCATGTTTAATTATGTTCCCTTTGTTTTAGTTCTGCATTGTTGCTTCGGTTG
TTTATAAATGTAATTACAATC--------ATAAGATCTTCTTGTTTAGGTTCCTTTGCTCTGAAATAAAACTGCGACCGT
GCACTGCTTAGTAATCTCATTAT-TAATACTTGTTGAGCATTTTGCATACGAAAATTAGATCCAAGAA--------TGGA
TGCATGTACATGTTAAAGAAATGCTAATGGCTCTCCAACATGCTAACTGGAAAGTTTTAGTAACAACATGATGATGTACT
GATTAGGTTGCAAAGGCTTACTAAGATACTCTTTGACCAAACTGTTCTCTCTTGTAGTCTGGAGGAATGTGGCAGGTACT
TGGAGACTATTAAAGTGTTTGAAAACAAGCCAGCTGACAGCATTCGCGAGCACACAGATAATGATTATTTATCTCGGGTA
TGCACCCTTACAGTTACAACATGGTTTAATCTATCTATCTCATTAACTGGACTGGGACGGATTAATAAGTATGTTGAGTA
ATTAAGATTTGCGGAAAAGAAATCCCGCAACTTCAGCAATACTCAGTATTGCTTTTTCATTTATCAAGTTCCAAGCTTTG
CAAGTGTTTCAAACTTTCAATACAGAAGTTATATCGTCCTTTTGGGC--------------------------TGACTAT
TAGCAGTTGACTCATTATTTGCTGTAACAACGATCATTATTTGGTGGTTTCAATACTCAATTATATCGCCCTGTTCGGAG
TGTCCATTGTGTTAACAACGATCATTATTTGGTGTATTACTCATTTATGCTGTGGTTCTGGTTTTGGCAGTTCACTCATG
CTCTTACATCCATCCGGCGTGTTAACAAAACAGATGTTATCACACTTGGTTCGTCTTTTGGGGTAAGATGGAATAAGAAC
TGGAACTAT-ACATTGTCTTCCATAATGTATTGGATATGGTTGTGTACAGCTTTATTACTGTAAAAATGGTAGCATTTCA
CCTGACAAGATCACCCATCAAAC------AATTCACAATATAATTACATGCATCGGGTCTCGTATTTGCAGTCACTTTCC
CGAGTCATGGATGCTTCTATGGAAGAACTAGCTCGTTGTCCAGGAATTGGCGAACGGAAGGTGCCACTTCAAACCTCGAA
TTTTATTTGTCATGGTTCATGTTGTTACCCAACATTTTTTTTTCCGATCATCCCATAGATATAATAAGCTACAGCCA---
----TGTTTGCATTGCTTTACTTTTCCGCTTAATAACATGAAAGGCCATGTTTCGCTAGGCTAACATGTAGAGTTTGTCG
AACGTAGGTAAAGCGACTTCATGATACTTTTCATGAGCCATTTAAACGCGTTACGCCCCGCCCAAACCTCGTAGTACCTG
ATACTCCCGACAGAGAGAAAGCGTCTGGTCAGCCTTCATCGACCAACGATGGCACGCCGGAAAAGCCAGGCACTTCCAAG
AACAAGAAAGGCCCTGATGTCAAATCGGCCCTTACTGCTGCATTTGCGAAGTACTCAGAAAAGATCCGCAGTCAGGGCCG
CGAGGCGGCCCATGAGGCTGGTGAAGGTCCTAGCAGCTCAACCATGGAAGGTGACAAGACAAAACAATTAGATTAGCAGT
AGGAAGGAGTAGGAAGCGGCACGTGCAAATGTACTGCTGTTGTTGTAGCTGCAAAATTTGCTTCCTCTGTTTATTGCTCC
TAAACAAGGGTGAATTTTGCATTGTACTAATTGTTGTTGTAGTGTAGGCTTTCCTTTTTCTCAACAAGGGGTGGATTTTG
CATTGTTATGCAGGCCTTCTCTTTCCTGTCAACACAATTTAGCCGATCTTCTCGTTTTTTCTGTCAGTATACGT------
------------TTCTGCCTTGGAGAACTCTCAGAGCCATCCAAAAGCACACCGGAAAATGTAATCTGTATTTTGTGACA
AACATTG-CCATGCTTCGTTGTTCTTGTTCAGCAACTGAAGCAGTCGGCTCAATGAACTTTCGTGTTTAGGTTCCGAAGA
TGCGTTTGCGAACGGTTGCCTCTTCAGTAGCTCAATGCTGCGTACTTTTCGCACAACTTGG---TACTACTTGCTGCCCA
AAAATAGAACTCAAACTCTACTGGGCAAGTTCTGATATTGATACATTCAAAACTGGGAGCATAAGTTCAGCAAAGCTCTT
AATATAAATGGGCTCTACTTGCATCCTTGGTTGATTATTATTTTCATTCAATGT--------------------------
--------------------TCTGCAATGGAGGGCCGCAA--------CCAGGCAGGGATCAAATGATAATGCTTCAGCG
ACAAAATTA-----------------------------------------------------------------------
--------------------------------------------------------------------------------
----------TACATGCCACTGCTGGATAGAGTACAATTTATTTATTTTGCATTCTTCTGCAAGCTGTTTGAACCAACGG
GCACCCTACACAATCTACGGGATAATCACAAATGTTTGAATGATAGGTGTGGCCATAGCAGGGGAATGCACAGGACCACA
ATCTATGACCCACCAAAACCTATTGAATAAAATAAACCAAAAAAAAAGCTAAATAAAAACTAATATACACACTGATGGCA
ACAGGCCAAGGAGCACGTCCCCATTTTT---TTCTTCTTCTGACGGCGCTTATTCGGATATA------TATATATA----
----GCTTCCGCGAGTACTGCTTCTCTTATGAAACTCTC--AGATGATGCGAAAGCCAAGTGCGGGTACCCATATCAGCT
GAGTGTTTCACCTTGCTATGTTTCTTCATTGTCCTCGTCCCTAATGTCTTC
>SNPs
--------------S---------------------------S--------------S------SSS-------------
---------S----------------------------------------------------S-------------S---
------SSS------S----------S-----------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------S-------------------S-----SSSS
S-S-----------------------------------------------------------------------------
---------------------------------------------------S------------------------S---
----S--S------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------S-----------------------------S------S---
-----------S---------------------------------------------------------------S----
-S---------S--------------------------------------------S-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------SSSSSSSSSSSSSSS---S----------------S
--------S---------S-SSSSSSSSSSSSSSSSSSSSSSSS------------------------------------
-S-----SSS----------------------------------------------------SSS---------------
----S-S------------------------------------------------------------------------S
SSSSSSS-------------------------------------------------------------------------
------------------------------------------S-------------------------------------
--------------------------------------------------------------------------------
---------------------------------S--------------------------S-------------------
------------S---S-------S-------------------------------------------------------
-----------------------------------------------------------S----------S--------S
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------S-----S----------------------------S-----------------------------
--------------------------------------------------------------S-------------SSS-
SSSSSSSSSSS--------S------------------------------------------------------------
--S------------S------------------------------------S--------------------S------
----S--------------------------------------------------------S------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------S--------------------------------------------------
----------------------------------------------------------S---------------------
--------------------------------------------------------------------------------
------------------------------------------------S-------------------------------
-------------------S------------------------------------------------------------
--------------------------------------------------------------------------------
-------------S---------------------------S----------------------S---------------
------------------------SS------------------------------------------------------
--------------------------------------------------------------------------------
---------------S-----------S------S------------------S----------S-----------S---
------------------------------------------------S-------------------------------
----------------------S------------------------SSSSSSSSSSSSSSSSSSSSSSSSSS-------
-----------------------------------------------------------S--------------------
-----S------------------S-------------------------------------------------------
---------------------------S---------------------------S------------------------
-----------------------------------S------------------------------------S-------
------S---------S---------------------------------------------S-----------------
------------------------------------------------------------------------S-------
---------------------------------------------S----------------------------------
-S---------------S-----------------------------------S--------------------------
---------------------------S----------------------------------------------------
-------------------------------------------------------S------------------------
-------------------------------------------------------------------------------S
-----------------S------------------------------------------------S-------------
--------------------------------------------------------------------------------
-------------------------------------------S------------------------------------
------S-------------------------------------------------------------------SSSSSS
SSSSSSSSSSSS---------------------------------S----------------------------------
--------------------------------------------S-------------------------S---------
----------S---S-----------S----------------------------------SSS----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------S------------------------------------------------------
-------------------------------------------------S-----------------------S-----S
--------------------------------------------------------------------------------
---------------------------SSSS---------------------------------------------SSSS
SSSS-----------------------------------SS---------------------------------------
---------------------------------------------------
>forward_1350
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---------------------------------------------------CAAGGACCAAGCCAGCCAT----------
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>reverse_3182
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-------------------------------------------------------------CGGAACCGTTATTTGAACA
CCC-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>forward_3043
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---------------------------------------------------------------TGTTTGCTGGTTTCACT
GCG-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_4962
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-CCGTGTTTGCATTGCTCTACT----------------------------------------------------------
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>forward_4588
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--------TCCATCCGGCGTGTTAACAG----------------------------------------------------
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>reverse_6510
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-----------------------------TCTTCTTCTTCTGACGGCGC-------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------
