>input_sequence_24213
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---------------------ATGATGTCTGCAAAGAAGAGATCCATGTCTGGAAAAGGGAAGAGGCGAAGCGCCAGGTT
GCTCAAGCTCGAGGAGCAGAAGAATGATGACAAGGATGGTGGCTGCATCCTAGATCCCTGGCACATCATCCGGAATAGCT
TCTCCTGCGCCGCGCAAGGGAAGAGAAAAAGGAATGACCAAGTCCAGGTAAAAATTTCCATCAAAGCTATGAATTTGTTT
TCTCTCTCCCGGTTGATCTGTTCATTCATCTACATCTTTCTT----CACAAGTTACAGGGAGAAGCTTCGTGTGGCCAAG
AGATCGATGCGGCATATACCGGTAAGTGATCACCGCCTTGTTTTCTGATGGCATGCTGATGCTGCCTGTGTGTGCATGCG
TGAATCCAGTTAATTTTGTTTCAGATAACATGTCAGGCAAGGACGCGACATCGGAGCAGATCATCGACTACATTCTCAAC
ATGCTGGAGCTGTAAGCTTGGGACTATGTGTATATCTTTTCTTTTCCTGTTTTGCTACAGCACAAGCGATGTTGCGTTGA
TGAGAGAGTGGCCGTAGATGGGGGAGGAAAGGGCGGCGGCAAGAGGGCTAGAAGATGAGGATGTGATAAGGAAAGTTGGG
GTTAGGTGAAGAAAACGAATTATAACCATTGAATGGAAAGCATGCGGCTAAAGGAGGTTACTAGGATTTTAAGAA----A
AAAATGCAATTGTGCTACGGCAAGACCCCTTTCGGTTTGAATAGAGCTCATGTGACTGGAATTCTCTTAAATTTAAATCA
CCTTGCTTCTTCCTCCTCCCCTCTAGTGGCATGAGGTGGAGCTCACAACCGGCGGT----AAGGAGATGGCCGTAAAGAG
AGGCCTGGGGCTGGGGGCATTGGCGCGGGAGAAGAGCTGCCACCACCTGGACATAGAGAGATGTTTGTGTGCGTGTGCGG
AGAGGAGGGGGGGAGGGGTCATGTAGAGAGCAAGGTGAGGAGGGG-----------------------------------
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-----------------------------------------------------------------AAGGGGGCTGCGTGA
CTAGCTATGGGGTGGGTGGGGTCAAAGAGCGGGTTGAGGAGCAAATGATGCGG------------AGTGATCGGATATAG
GGAGAAGAGGGCGACGGTGGCAACCAGAGAGCTGAATGACGAGGAGGACAGTAAATATAGAAAGTTAAGGGTTTAGGGGG
ATAAGGCGAAACATAGGAAGGTCTTTTTTGTTGGATGGAACTCATGTGAAGAGCAAAAAAGAGAAATTGTGGAAATCATG
TGGCTTGGCTAAAGAAAGATTTTTGAAACTAGCTTGGCTAAAGAAAGTGACCAGGCAACTGTACTCAAGCATCTCTTTCT
TGTTGGTCGGGCTGTGGCGTTGTGTATCGGGAGCACAAGCGCGAACCTGGAAGGTCTTTTTTACATGCGTTTTGTTTGTC
CCGTTGCAGGAGAGACAGACTTGAGTTGTTTGCGATGCCGGATGACATCCAGGTAAACCATGCTCGCATGAACAAGGCAC
GTCTGAAATTTCCCCTCGCGATTTATAAATGGAA---ACGTTGACATATTTCTTGTTTCATCTTGACATGGTGGTGC---
---------------AGGTGGGTGATTGCACGGAACGGGTAGAGAGGCCCGGCGATTTCGCGACGTTAAGGCAGAAGAAC
ACAGATGGCACCTACAAGACGCTAGAGCAATTCGAGGTCAGCCCGTCTCATTCATTGTTCCTGTTGTTTATTTTTCTTTC
TTTCTTTCTTTCTTTCTTTCTTT-----------------------ATTTATTTATTTATAGATAGATAGAGAAATGAAC
ATTTGGTTCCATGATCTTCATGTGCAGAAGGATGTGTACATGGTGTTCCAGAAGGCAATGTCCATAAACAGCCAGGACAC
CATACCTTACAAAGAGGTTAGTCGGTCGTTCAT---TCCTCAATTAAGCAACCATACTA--------TACGTTGCATGCA
TGCCAGAATGAATGCATGAATGTTTGTTTTTGGTGCAGGCCGTGGCGTTGCTGGATCAAGCCAAGCAGGTTTTCCTGTCC
CTCAAGAAGAACCGGATGTACTCCGAGTCGGACCTCCTGGCCTGGCGTCACAAGCAACTCGACGCCGGGCCCAGCAAGGC
AGCGAGAGATCAACAAGGCGGCGATGCTGCTGTTACACCTGCACAGCAGCGGCCCAGCATCACGCCGCTGAGGAAGAAGG
C---------------CGGCGAGAAGAAACACCAGATCGGCAAGGGAGGAATCAGAAGCACGCCATCGCCGGTAAAGAGA
GCAAGAAAAGGTAATGA-----GTCGATGAGACGACATCGATCCAATGCACATCCAAAGAGAACA-TTGCTGAATGCTGA
CGTGATGGCGCTGGCCACAGGGTTCGCAGCAGCGACAACGGAACCTGGTGGCGCCAGGGAGCTCAAAAGGAGGCTCACTT
ACAACGATGTCGCTGGTCGGGCAACGCCGGTGACGCTGCCGCCGCCTGCCTTCCGAGATGGGCAAGCTACCGTCGTTTAT
GTATGTAAAATATACTCTACTACTCCTATAG------------------------TAGGAGTAACAATCATGGATGC---
-------GTGGGAACTGAAGC-AAGTTTTGGTGCAGCAACATGCGCAGGTGCAGGGAGGGCACACGTACCAGGAAAGCCT
CCGGCGCTACGTGCGGGACGCAGGGCTCAAGGCAAGGCTGGCCACCGAGTTTAAGATCCTCGAATGTGACACTCGGGGCA
GGCACAACCCCTCGCCGGCCTCCTACTGGAACGGTTTCGCCCCCAACGCCGGCACCTACTACCCCTCAAGTGCCGCCGCC
GCCGCCTCCACCGCGCTCCGCACAATGTCACCGGCGTCCGGTGGCGAGCGGCCTTTTCCGGATTGCAAGCTGGAGACGGA
CGACCTGCTCAGCCTCGTCATGCTCATGGGCACGCCCGCCTTCTTGGAGAGAGCTAAGCACATGTTTGGTTACACGGCCG
CTGAGGACAGCTCCAAGGTGACCAGAGCGGCCGGCGAC---GCAAAGGTCGCCGTCACAGAAGCGCCACAGACGAGTGAG
CCAGGCGATCCGGCGGCAGCCACTTTCGGACCGTTCGCTCCGCCCAAGTTGCCCCTTAGCCGGCTGGGCTTCAGCCAGTT
CGCCGGCTCTTCGGCCCAGCCGTTCATGGTGAAGTCGAATTCTGCCGGGGAGAAGAGACGAGAATGA-------------
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>chr4A_1_TraesCS4A01G132800
TTCACCAACCGCCAGATCTGAGACCTCCAGGTGCTCGC--CGCCGCCCGCACCTTCCCCATTCGCTCCGGTGACCCGTCG
ACGCTTCCCCTGCCTATCTCCGCG-----CCGCTGCTTCCTCCACCTTCTCTCCTTGCTGCCGCCCCTCGAGCACACCAT
TCCTCCGACGAACAGCGCTCGACGATCGTTTGCGGCTCCGCGCCGACAAGGTGTTTGACAAAACGCTTTCAAGGTATGTA
TTGCTTCAACTTTATATTTTGTAGATGAATTTGGTGAACT----------------ATTTGTTGTGA--AAAGATAAACT
ATTTGTTTGAGTTGTAATAAATTGAACTATTTATTGTTGATTTATTTTTTGTGTGTTTGATCTTCTTGGTTCTATTTTGA
GTGCGAAATGTCGTTTGTGCTGGGC--------------------------GCGCACTGTGTAAATTTAGCGCGCCTGCT
GGAGCTATAGCATCACGCCATATTTTGCCGCGCCTGCTAGAGCAAGCGCCCTGCTGCAAGCAAAAAAGCTATTTCGGCAC
TGTAAAAATAATTTAGCGCATCGCGTAGTTGCGCGCCTGTTGGAGATGCTCTTACGAGACTCTTTTGCGTGCTATACACA
ATGTACAAGGATTAATTTCAGATTGCAGAAGGTAAGTGTTCACATATGGGAAGCAGCTACTAATGGTAAGTTGGCAACAC
GCGGAGACAAGCTTTTACAGCCAAGCTGTAACTGGCTCAGCCATTCTAAGACGATTTCAGAGGCGAACTCCAGATTGTTT
CCGTTTCAATGCAATTGCTGCTATATGCACAATCTGTCAAACAGGATTGGCAACCCTTTAAAGCGCCCACGTAAAATAAA
AATTTCCATGTCAGGAACAGCATTCAAAGATTTACAGGGCCATACATC----CTGGAAAAGTAAC-----TAGCATGGTA
CA-TAAGTTATAGCGCATCTCAGGCTCACATCACCTATTCCTCTTGTTGTTTGTTGGATACAACGACCATGAAGGAAGAA
GAAACCAAGAAGAAGAAGAAGATGATGTCTGCAAAGAAGAGATCCATGTCTGGAAAAGGGAAGAGGCGAAGCGCCAGGTT
GCTCAAGCTCGAGGAGCAGAAGAATGATGACAAGGATGGTGGCTGCATCCTAGATCCCTGGCACATCATCCGGAATAGCT
TCTCCTGCGCCGCGCAAGGGAAGAGAAAAAGGAATGACCAAGTCCAGGTAAAAATTTCCATCAAAGCTATGAATTTGTTT
TCTCTCTCCCGGTTGATCTGTTCATTCATCTACATCTTTCTT----CACAAGTTACAGGGAGAAGCTTCGTGTGGCCAAG
AGATCGATGCGGCATATACCGGTAAGTGATCACCGCCTTGTTTTCTGATGGCATGCTGATGCTGCCTGTGTGTGCATGCG
TGAATCCAGTTAATTTTGTTTCAGATAACATGTCAGGCAAGGACGCGACATCGGAGCAGATCATCGACTACATTCTCAAC
ATGCTGGAGCTGTAAGCTTGGGACTATGTGTATATCTTTTCTTTTCCTGTTTTGCTACAGCACAAGCGATGTTGCGTTGA
TGAGAGAGTGGCCGTAGATGGGGGAGGAAAGGGCGGCGGCAAGAGGGCTAGAAGATGAGGATGTGATAAGGAAAGTTGGG
GTTAGGTGAAGAAAACGAATTATAACCATTGAATGGAAAGCATGCGGCTAAAGGAGGTTACTAGGATTTTAAGAA----A
AAAATGCAATTGTGCTACGGCAAGACCCCTTTCGGTTTGAATAGAGCTCATGTGACTGGAATTCTCTTAAATTTAAATCA
CCTTGCTTCTTCCTCCTCCCCTCTAGTGGCATGAGGTGGAGCTCACAACCGGCGGT----AAGGAGATGGCCGTAAAGAG
AGGCCTGGGGCTGGGGGCATTGGCGCGGGAGAAGAGCTGCCACCACCTGGACATAGAGAGATGTTTGTGTGCGTGTGCGG
AGAGGAGGGGGGGAGGGGTCATGTAGAGAGCAAGGTGAGGAGGGG-----------------------------------
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-----------------------------------------------------------------AAGGGGGCTGCGTGA
CTAGCTATGGGGTGGGTGGGGTCAAAGAGCGGGTTGAGGAGCAAATGATGCGG------------AGTGATCGGATATAG
GGAGAAGAGGGCGACGGTGGCAACCAGAGAGCTGAATGACGAGGAGGACAGTAAATATAGAAAGTTAAGGGTTTAGGGGG
ATAAGGCGAAACATAGGAAGGTCTTTTTTGTTGGATGGAACTCATGTGAAGAGCAAAAAAGAGAAATTGTGGAAATCATG
TGGCTTGGCTAAAGAAAGATTTTTGAAACTAGCTTGGCTAAAGAAAGTGACCAGGCAACTGTACTCAAGCATCTCTTTCT
TGTTGGTCGGGCTGTGGCGTTGTGTATCGGGAGCACAAGCGCGAACCTGGAAGGTCTTTTTTACATGCGTTTTGTTTGTC
CCGTTGCAGGAGAGACAGACTTGAGTTGTTTGCGATGCCGGATGACATCCAGGTAAACCATGCTCGCATGAACAAGGCAC
GTCTGAAATTTCCCCTCGCGATTTATAAATGGAA---ACGTTGACATATTTCTTGTTTCATCTTGACATGGTGGTGC---
---------------AGGTGGGTGATTGCACGGAACGGGTAGAGAGGCCCGGCGATTTCGCGACGTTAAGGCAGAAGAAC
ACAGATGGCACCTACAAGACGCTAGAGCAATTCGAGGTCAGCCCGTCTCATTCATTGTTCCTGTTGTTTATTTTTCTTTC
TTTCTTTCTTTCTTTCTTTCTTT-----------------------ATTTATTTATTTATAGATAGATAGAGAAATGAAC
ATTTGGTTCCATGATCTTCATGTGCAGAAGGATGTGTACATGGTGTTCCAGAAGGCAATGTCCATAAACAGCCAGGACAC
CATACCTTACAAAGAGGTTAGTCGGTCGTTCAT---TCCTCAATTAAGCAACCATACTA--------TACGTTGCATGCA
TGCCAGAATGAATGCATGAATGTTTGTTTTTGGTGCAGGCCGTGGCGTTGCTGGATCAAGCCAAGCAGGTTTTCCTGTCC
CTCAAGAAGAACCGGATGTACTCCGAGTCGGACCTCCTGGCCTGGCGTCACAAGCAACTCGACGCCGGGCCCAGCAAGGC
AGCGAGAGATCAACAAGGCGGCGATGCTGCTGTTACACCTGCACAGCAGCGGCCCAGCATCACGCCGCTGAGGAAGAAGG
C---------------CGGCGAGAAGAAACACCAGATCGGCAAGGGAGGAATCAGAAGCACGCCATCGCCGGTAAAGAGA
GCAAGAAAAGGTAATGA-----GTCGATGAGACGACATCGATCCAATGCACATCCAAAGAGAACA-TTGCTGAATGCTGA
CGTGATGGCGCTGGCCACAGGGTTCGCAGCAGCGACAACGGAACCTGGTGGCGCCAGGGAGCTCAAAAGGAGGCTCACTT
ACAACGATGTCGCTGGTCGGGCAACGCCGGTGACGCTGCCGCCGCCTGCCTTCCGAGATGGGCAAGCTACCGTCGTTTAT
GTATGTAAAATATACTCTACTACTCCTATAG------------------------TAGGAGTAACAATCATGGATGC---
-------GTGGGAACTGAAGC-AAGTTTTGGTGCAGCAACATGCGCAGGTGCAGGGAGGGCACACGTACCAGGAAAGCCT
CCGGCGCTACGTGCGGGACGCAGGGCTCAAGGCAAGGCTGGCCACCGAGTTTAAGATCCTCGAATGTGACACTCGGGGCA
GGCACAACCCCTCGCCGGCCTCCTACTGGAACGGTTTCGCCCCCAACGCCGGCACCTACTACCCCTCAAGTGCCGCCGCC
GCCGCCTCCACCGCGCTCCGCACAATGTCACCGGCGTCCGGTGGCGAGCGGCCTTTTCCGGATTGCAAGCTGGAGACGGA
CGACCTGCTCAGCCTCGTCATGCTCATGGGCACGCCCGCCTTCTTGGAGAGAGCTAAGCACATGTTTGGTTACACGGCCG
CTGAGGACAGCTCCAAGGTGACCAGAGCGGCCGGCGAC---GCAAAGGTCGCCGTCACAGAAGCGCCACAGACGAGTGAG
CCAGGCGATCCGGCGGCAGCCACTTTCGGACCGTTCGCTCCGCCCAAGTTGCCCCTTAGCCGGCTGGGCTTCAGCCAGTT
CGCCGGCTCTTCGGCCCAGCCGTTCATGGTGAAGTCGAATTCTGCCGGGGAGAAGAGACGAGAATGAAGGACGAACCCAA
CTCCAGCAAGTTCACTCCGTCCATTTTGT--------GTCGTGTCCTTGACTCCCATTATATCGCTCAGCGTCAGCGGGG
AAATGATAGTATTATTTTAGAATAATAATTGCAACTAGCATCTCTTTTCTATCTAAACTTAGTCAGACACCT--------
--------------------GAGGTTGCTCATCATCAAATGTATGCAAGTTCCAAAACCATCACAGACTTCAGATATACA
CAAGACTTTCTGCCACAGGCCAACATA--TTTTTTTTTTTTTGCCAAGAAATAACATACCGGAAGTAATTAACATGCCAC
AACAGTTGTTTTCTGATTGCTACCCAAGCATATTAGCAGACTGGACTCCTTTCTCTTATGTTTTTCTTAAAGGAAACACT
GGCATATTACCTTCTTAACACGTATGTAGCTCGTTGCCACTCTCAAAGCATCGCACGGCTGTAAACGCCACCTACACCGT
AACAATTACTGCATCAGCCAACTTCAAGAGGTCTCGCAAACTTAAAACAAGAAGCAGCAGCAGGACCTACAGTATGAATG
GCAGCTGCATTTATCAACCTTTCCAGGTATCCTTGATGTTCCTGACCGTCCTCAGCGCTTCAACTGCCGACTTGGCACCA
AATTTTGCCTGCAGAATCAAGGATACAGTCACCAAATGTGTGCCGTTTGTATTAC-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------AGAAGCATAGTAACTAGCGGGTGTGCTTTATGGACCTGTATTTCAGGCAGAT
CAACACGCATGAAGGTGTTTATCTCAAACTCATCTCCTATAGTTGAGGGAACCGTCGGTTGATTTGCCTCACGCTGCTTT
TGAGCCCATTCCAGTTTCTGCTTCATTTTTTCATTCTCTGGCTCGACTGTCAGCATGAATTGTAGGCTCTTTACAGTGTA
CTGTGAGATACAATGAAATAATAAGAGCAGAGTATACATCACTTATCTGTTCAAGCATATCATATTAGCGACACATAACA
CAAATTATTGTTGGGTGCGCACATGGAGTTAATGGCAA
>chr4B_1
TTCACCAACAGCCAGATCTGAGACCTCTAGGCGCTGGCGGCGCCGCCCGCACCTTCCTCATTCGCTCCGGTAACCCGTTG
GCGCTTCCCCCGCCTATCCCCGCGCGCCACCGCTGCTTCCTCCACCTTCTCTCCCCGCCGCCACCCCTTGAGCACACCGT
TCCTCCGACGAACAGCGCCCGACAGCCGTTTGCAGCTCGGCGCCCACAAGGTGTTTGGCAAAACGCTTGCAAGGTATGTA
TTGCTTCAACTTTATATTTTGTGGATGAATTTGGTGAACTATTGTGGTGGTGAACTATTTGTTGTGCTGGAAGATAAACT
ATTTGTTTGAGTTGTAATAAATTGAACTATTTATTGTTGATTTATTTTTTGTGTGTTTGATCTTCTTGATTCTATTTTGA
GTGCGAAATGTTGTTTGTGCTGGGC--------------------------GC--------------------------T
GGAGCTACAGCGCCGCACCATATTTTGCAGCGCC-----CTTCTGCGAGCGA---------AAAAAGACTATTTCGACAC
TATAAAAATAATTTAGCGCGTTGCGCGGTTGCGCGCTTGTTGGAGATGCTCTTAGCAGATTCTTTCGCGTTC--TACACA
GTGTACAAGGATTAATTTCAGATTGCAGAAGGCAAGTGTTCACATATGGGAAGCAGCTACTAATGGTAAGTTGGCAACAC
GCGGGCACAAGCTTTTACAGCCAAGCTGTAACTGGCTCAGCCATTCTAAGACGATTTCAGAGGCAAACTCCAGATTGTTT
CTGCTTCAATGCAATTGCTGCTATGTGCACAATCTGTCAAACAGGATTGGCAACCCTTTAAAGTGCCCACGTAAAATAAA
AATTTGCATGTCAGGAACAGCATTCAAAGATTTACAGGGCCATACAAT----CTGGAAAAGTAACCACCGTAGCATGGTA
CATTAAGTTATAGCGCATCTCAGGCTCACATCACCTATTCCTCTTGTTGTTTGTTGGATACAACGACCATGAAGGAAGAA
GAAACCAAGAAGAAGAAGAAG------------------------ATGTCTGGAAAAGGGAAGAGGCGAAGCGCCAGGTT
GCTCAAGCTCGAGGAGCAGAAGAATGATGACAAGGACGGTGGCTGCATCCTAGATCCCTGGCACATCATCCGGAATAGCT
TCTCCTGCGCCGCGCAAGGGAAGAGAAAAAGGAATGACGAAATCCAGGTAAAAATTTCCATCAAAGCTATGAATTTGTTT
TCTCTCTCCCGGTTGATTTGTTCATTCATCTACATCTTTCTTTCTTCACAAGTTACAGGGAGAAGCTTCGTGTGGCCAAG
AGATCGATGCGGCATATACTGGTACGTGATCACCGCCTCGTTTTCTCATGGCATATGC-TGCTGCCTGTGTGTGCATGCG
TGAATCCAGTTAATTTTGTTTCAGATAACATGTCAGGCAAGGGCGCGACGTCGGAGCAGATCATCGACTACATTCTCAAC
ATGCTGGAGCTGTAAGCTTGGGACTATGTGTATATCTTTTCTTTTCCGGTTTTGCTACAGCACAAGCGAGGTTGCGTTGA
TGAGAGAGTGGCCGTAGATGGGGGAGGAAAGGGCCGCGGCAAGAGAGCTAGAAGATGAGGATGTGATAAGGAAAGTTAGG
GTTAGGTGAAGAAGACGAATTATAACCATTGGATGGAAAGCATGCGGCTAAAGGAGGTTACTAGGATTTTAAGAAGAAAA
AAAATGCAATTGTGCTATGGCAAGACCCCTTTCGGTTTGAATAGAGCTCGTGTGACTGGAATTTTCTAAAATTCAAATCA
CCTTGTTTCTTCCTCCTCCCCTCTAGTGGCATGAGGTGGAGCTCACAACCGGCGCTAAGGAAGGAGATAGCCGTAAAGGG
AGGCCTGGGGCTGGGGGCATTGGCGCGGGAGAAGAGT----------------TAGAGAGATGTTTGCGTGCGTGTGNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNN------------------------------------------------------------
-------TGGGATGGGTGGGGTCAAAGAGCGGGTTGAGGAGCAAATGATGCGGCAACA-----AAAGTGATCGGATATTG
GGAGAAGAGGGTGATAGTGGCAACCGGAGAGCTGAATGACGAGGAGGGCAGGAAATATAGGAAGTTAAGGGTTTAGGGGG
ATAAGGCGAAACATAGCCA-----------TTGGATGGAACTCATGTGAAGAGCAAAAAAGAGAAATTGTGGAAATCATG
TGGCTTGGCTAAAGAAAGGG------------------------------------------ACTCAAGCATCTCTTTCT
TGTTGGTCGGGCTGTGGTGTTGTGTATCGGGAGCACAAGCGCGAACCTGGAAGGTCTTCTTTACATGCGTTTTCTTTGTC
CCGTTGCAGGAGAGACAGACTCGAGTTGTTTGCGATGCCGGATGACATCCAGGTAAACCATGCAGGC-------------
-TCTGAAATTTCCCCTCGCGATTTATAGATGGAAACAACGTTGACACATTTCTTGTTTCATCTTGACATGGTGGTGCTGG
TGCTGGTGCTGGTGCAGGTGGGTGATTGCGCGGAACGGGTAGAGAGGCCTGGCGATTTTGCGACGTTAAGGCAGAAGAAC
ACAGATGGCACGTACAAGACACTAGAGCAATTCGAGGTCAGCCCGTCTCATTCATTGTTTCTCCTGTTTCT---------
----TTTCTTTCTTTCTTTCTTT-----------------------ATAGATGG----ATAGATGGATAGAAAAATGAGC
ATTTGGTTCCATGATCTTCATGTGCAGAAGGATGTGTACATTGTGTTCCAGAAGGCAATGTCCATAAACAGCCAGGACAC
CATACCTTACAAAGAGGTTAATCGGTCGTTCAT---TCCTCAATTAACCAACCATACTACTATACAGTACGTTGCATGCA
TGCCAGAATGAATG----AATGTTTGTTTTTGGTGCAGGCCGTGGCGTTGCTGGATCAAGCCAGGCAGGTTTTCCAGTCT
CTGAAGAAGAACCGGATGTACTCCGAGTCGGACCTGCTGGCGTGGCGTCACAAGCAACTCGACGCCGGGCCCAGCAACGC
AGCGAGAGATCAACAAGGCGGCGATGCTGCCGTTACACCTGCACAGCAGCGGCCCAGCATCACGCCGCTGAGGAAGAAGG
C---------------CGGCGAGAAGAAACACCAGATCAA---------------AAGCACGCCATCGCCCGTAAAGAGA
GCAAGAAAAGGTAATGTGTCTGGTCGAGGAGACGACATC---------------CAAAGAGAACGTTTGGTGAATGCTGA
CGTGATGGCGCTGGCCACAGGATTCGCAGCAGCGACAAGGGAACCTGGTGGTGCCAGGGAGCTGAACAGGAAGCTCAGTT
ACAACGATGGCGCTGGTCGGGCAACGCCGGTGACGCTGCCGCCGCCTGCCTTCCGAGATGGGCAAGCTACCGTCGTTTAT
GTATGTAAAATATAAAAGCCCCAGATGCTCTCAACTACTACTCGATCCTACTGTATATGAGTAACAATCATGGGTGC---
-------GTGGGAACTGAAGC-AAGTTTTGGTGCAGCAACATCCGCAGGTGCAGGGGGGGCACACGTACCAGGACAGCCT
CCGGCGCTTCGTGCGGCACGCAGGGCTCAAAGCAAGGCTGGCCACCGAGTTCAAGATCCTCGACTGTGACACTCGGGGCA
GGCACAACCCCTCGCCGGCCTCCTACTGGAACGGTTTCACCCCCAACGCTGCCACCTACTACCCCTCAGGTGCCGCCA--
-------CCACCTCGCCCCGCACGACGTCACCGTCGTCCGGTGCCGAGCGGCCGTTTCCGGATTGCAAGCTGGAGACGGA
CGACCTGCTCAGCCTCGTCATGCTCATGGGCACGCCCGCCTTCTTGGAGAGAGCCAAGCACATGTTTGGTTACACGGGCG
CTGAGGACATCTCCAAGGTGACCAGAGCGGCCGACGACGATGCAAAGGTCACCGTCTCAGAAGCGCCGCAGACAAGTGAT
GCAGGCGATCCAGCG---GCCACTTTCGGACCGTTCGCTCCGCCCAAGTTGCCCCTTAGCCGGCTGGGCTTCAGCCAGTT
CGCCGGCTCTTCGGCCCAGCCGTTCATGGTGAAGTCGAATTCTCCTTGGGAGAAGAGACGAGAATGAAGGACGAACCCAG
CTCCAGCAAGTTCACTCCGTCCATTTCACGTCTTCACGTCGTGTCCTCGACTCCCATTATATTGCTCAACGTCAGCGGGG
AAATGATAGTATTATTTTAGAATAATAATTACAACTAGCATCTCTTTTCTATCTAACCTTAGTCAGACACCT--------
--------------------GAGGTTGCTCATCATCAAATGTATGCAAGTTCCAA--CCATCACAGACTTCAGATATACA
CAAGACATTCTGCCACAGGACAACATA-TTTTTTTTTGTTTTGCCAAGAAATAACATGCCAGTAGTAATTAACATGCCAC
AACAGTTGTTTTCTGATTGATACCGAAGCATATTAGCAGACTGGACTCCTTTCTCTTATATTTTTCTTAAAGGAAACACT
GGCATATTACCTTCTTAACACGTATGTAGCTCGTTACCACTCTCAAAGCATCGCACGGCTGTAAACGCCACCTACACCGT
AACAATTACTGCATCAGCCAACTTTAAGAGGCCTCGCAAACTTAAAACAAGAAGCAGCAGCAGGACCTACAGTATGAGTG
GCAGCTGCGTTTATCAACCTTTCCAGGTATCCTTGATGTTCCTGACCGTCCTCAGCGCTTCAACTGCCGACTTGGCACCA
AATTTTGCCTGCAGAATCAAGGATACAGTCACCAAACGTGTGTCGTTTGTGTTACAAGAAACTGTCTGAGATGGCGCAAG
AGTGCAATGCAACAAAAAAACCAAAGAGACCAGATGAGCAAAAACTGGTGAGGAAGAAAAGAAACGACTGAAACTGTACA
GCTAATAAAATTGAAATTAAGAGACTCCTGATGTGGTAGTTCTTATTTGTGAGGTGACAAGTTACTATCTAAAACTGGCA
CTACGAATTACAGAAGATGGTATCATCTAGAAGCACAGTAACTAGCGGGTGTGCTTTACGGACCTGTATTTCAGGCAGAT
CAACACGCATGAAGGTGTTTATCTCAAACTCATCTCCTATAGTTGAGGGAACCGTCGGTTGATTTGCTTCACGCTGCTTT
TGAGCCCATTCCAGTTTCTGCTTCATTTTTCCGTTCTCTGGCTCGACTGTCAGCATGAATTGTAGGCTCTTTACAGTGTA
CTGTGAGACACGATGAAATAATAAGAGCAGAGTATACATCACTTATCTGTTCAAGCATATCATATTAGCAACACATAACA
C-AATTATTGTTGGGCGCACACATGGAGTTAATGGCAA
>chr4D_34
---------------------------------CTCGC--CGCCGCCCGCACCTTCCCCATTCGCTCCGGTGACCCGTTG
GCGCTTCCCTCGCCTATCCCCGCGTGCCGCTGCTGCTTTCTCCACCTCCTCTCCTCGCCGCCGCCCCTCCAGCACACCAT
TCCTTCGACGAACAGCGCCCGACGGCCATTTGCAGCTCGACGCCCACAAGGTGTTTGACAAAACGCTTGCAAGGTATGTA
TTGCTTCAACTTTATATTTTGTAGATGAATTTGGTGAACT----------------ATTTGTTGTGCTGAAAGATAAACT
ATTTGTTTGAGTTGTAATAAATTGAACTATTTATTGTTGATTTATTTTGTGTGTGTTCGATCTTCTTGGTTCTATTTTGA
GTGCGAAATGGTGTTTGTGCTAGGGGCGCGCTGTGTAAATTTAGCGCGCCTGC--------------------------T
GGAGCTATAGCGCCGCGCCATATTTTGCGGCGCCTGCTCCTGCTACGAGCAA---------AAAAAGGCTATTTCGGCAC
--TAAAAATAGTTTAGCGCGTCGCGCGGTTACGCGCCTGTTG----TGCTCTAACCAGATTCTTTTGCGTGC--TACACA
ATGTACAAGGATTAATTTCAGATTGCAGAAGGTAAGTGTTCACATATGGGAAGCAGCTACTAATGGTAAGTTGGCAACAC
GCGGGCACAAGCTTTTACAGCCAAGCTGTAACTGGCTGAGCCATTCTAAGATGATTTCAGAGGCAAACTCCAGATTGTTT
CCGTTTCAATGCAATTGCTGCTATATTCACAATCTGTCAAACAGGATTGGCAACCCTTTAAAGCGCCCACGTAAAATAAA
AATTTCCATGTCAGGAACAGCATTCAAAGATTTACAGGGCCATACATACATGCTGGAAAAGTAACTACAGTAGCATGGTA
CA-TAAGTTATAGCGCATCTCAGGCTCACATCACCTATTCCTCTTGTTGTTTGTTGGATACAACGACCATGAAGGAAGAA
GAAACCAACAAGAAGAA------GATGCCTGCAAAGAAGAGATCCATGTCTGGAAAAGGGAAGAGGCGAAGCGCCAGGTT
GCTCAAGCTCGAGGAGCAGAAGAATGATGACAAGGATGGTGGCTGCATCCTAGATCCCTGGCACATCATCCGGAATAGCT
TCTCCTGCGCCGCGCAAGGGAAGAGAAAAAGGAATGACGAAGTCCAGGTAAAAATTTCCATCAAAGCTATGAATTTGTTT
TCTCCCTCCCGGTTGATCTGTTCATTCATCTACATCTTTCTT----CAGAAGTTGCAGGGAGAAGCTTCGTGTGGCCAAG
AGATCGATGCGGCATATACCGGTACGTGATCACCGCCTCGTTTTCTGA-----------TGCTGCCTGTGTGTGCATGCG
TGAATCCAGTTAATTTTGTTTCAGATAACATATCAGGCAAGGGCGCGACGTCGGAGCAGATCATCAACTACATTCTCAAC
ATGCTGGAGCTGTAAGCTTGGGACTATGTGTATATCTTTTCTTTTCCGGTTTTGCTACATCACAAGCGAGGTTGCGTTGA
TGAGAGAGTGGCCGTGGATAGGGGAGGAAAGGGCGGCGGCAAGAGAGCTAGAAGACGAGGATGTGATAAGGAAAGTTAGG
GTTAGGTGACGAAGACGAATTATAACCATTGGATGGAAAGCATGCGGCTAAAGGAGGTTACTAGGATTTTAAGAAGAAG-
AAAATGCAATTGTGCTATAGCAAGACCCCTTTCGGTTTGAATAGAGCTCATGTGACTGGAATTTTCTTAAATTTAAATCA
CCTTGCTTCTTCCTCCTCCTCTCTAGTGGCATGAGGTGGAGCTCATAACCGGCGCTAAGGAAGGAGATGGCCATGAAGAG
AGGCCTGGGGCAGGGGGCATTGGCGCGGGAGAAGAGCTGCCGCCACCTGGACANNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGGGGGCAGCGCAA
CTAGCTATGGGATGGGTGGGGTCAAAGAGAGGGTTGAGGAGCAAATGATGCGGCGACAATGAGAAAGCGATCGGATATTG
GGAGAAGAGGGCGACGGTGGCAACCGGAGAGCTGAATGACGAGGA---CAGGAAATATAGAAAGTTAAGGGTTTAGGGGG
ATAAGGCCAAACATAGCCA-----------TTGGATGGAACTTATGTGAAGAGCAAAAAAGAGAAATTGTGGAAATCATG
TGGCTGGGCTAAAGAAACG-----------------------------GACCAGGCAACTATGCTCTAGCATATCTTTCT
TGTTGGTGTCCTGTGGAAGC-----ATCGGGAGCACAAGCGCGAACCTGGAAGGTTTTTTTTACATGCGCTTTCTTTGTC
CTGTTGCAGGAGAGACGGACTCGAGTTGTTCGCGATGCCGGATGACATCCAGGTAAAGCATGCACGCATGAACAAGACAC
GTCTGAAATTTCCCCACACGATTTATAGATGGA---AACGTTGACACATTTCTTGTTTCATCTTGACATGGTA-------
-----------GTGCAGGTGGGTGATTGCGCGGAACGGGTAGAGAGGCCCGGCGATTTTGCGACGTTAAGGCAGAAGAAC
ACAGATGGCACGTACAAGACACTGGAGCAATTCGAGGTCAGCCCGTCTCATTCATTGTTCCTGTTGTTTCT---------
----TTTCTTTCTTTCTTTATTTATAGATGGATCATGGATGGATGGATGGATGG----ATAGATGGATAGAGAAATGAAG
ATTTGGTTCCATGATCTTCATGTGCAGAAGGATGTGTACATGGTGTTCCAGAAAGCAATGTCCATAAACAGCCAGGACAC
CATACCTTACAAAGAGGTTAATCGGTCGTTCATTCCTCCTCAATTAACCAACCATACTA--------TACGTTGCATGCA
TGCCAGAATGAATG----AATGTTTGTTTTTGGCTCAGGCCGTGGCGTTGCTGGATCAAGCCAAGCAGGTTTTCCTGTCC
CTCAAGAAGAACCGGATGTACTCCGAGTCGGACCTCCTGGCGTGGCGTCACAAGCAACTCGACGCTGGGCCCAGCAAGGC
AGCGAGAGATCAACAAGGCGGCGATGCTGCCGTTACACCTGCACAGCAGCGGCACAGCATCACGCCGCTGAAGAAGAAGG
CCGCCGGCGTCGGCGTCGGCGAGAAGAAACACCGGATCGGCAAGGGAGGAGTCAGAAGCACGCCATCGCCGGTAAAGAGA
GCAAGAAAAGGTAATGA-----GTCGAGGAGACGACATCGATCCAATGCACATCCAAAGAGACCA-TTGGTGAATGCTGA
CGTGATGGCGCTGGCCACAGGGTTCGCAGCAGCGACAACGGAACCTGGTGGCGCCAGGGAGCTCAAAAGGAGGCTCACTT
ACAACGATGGCGCTGGTCGGGCAACGCCGGTGACGCCGCCGCCGCCTGCCTTCCGAGATGGGCAAGCTACCGTTGTTTAT
GTATGTAAAATAAAAGCCTCTCAAC----------------------------TATAGGAGTAACAATCATGGATGCATG
CGTGTGCGTGGAAACTGAAGCAAAGTTTTGGTGCAGCAACATCTGCAGGTGCAGGGGGGGCACACGTACCAGGAAAGCCT
CCGGCGCTTCGTGCGGGACGCAGGGCTCAAGGCAAGGCTGGCCACCGAGTTCAAGATCCTCGAATGTGACACTCGGGGCA
GGCACAACCCCTCGCCGGCGTCCTACTGGAACGGTTTCGCCCCCAACGCCGGCACCTACTACCCCTCAAGTGCCGC----
-----------------------GACGTCACCGGCGGCCGGTGGCGAGCGGCCTTTTCCGGATTGCAAGCCGGGGACGGA
CGACCTGCTCAGCCTCGTGATGCTGATGGGCACGCCCGCCTTCTTGGAGAGAGCCAAGCACATGTTTGGTTACACGGCCT
CTGAGGACAGCTCCAAGGTGACCAAAGCTGCCAAGGAC---GCAAAGGTCACCATCACAGAAGCGCCGCAGACAAGTGAC
GCAGGCGACCCCGCT---GCCACTTTCGGACCATTCGCTCCGCCCAAGTTGCCCCTCAGCCGGCTGGGCTTCAGCCAGTT
CGCCGCCTCTTCTGCCCAGCCGTTCACAGTGAAGTCGAAATCTCCTGGAGAGAAGAGACGAGAATGAAGGACGAACCCAG
CTCCAGCAAGTTCACTCCGTACATTTTGT--------GTCGTGTCCTCAACTCCCATTGTATCGCTCAAAGTCAGC-GGG
AAATGATAGTATTATTTTAGAATAAT---TGCAACTAGCATCTCTTTTCTATCTAAACTTAGTCAAACATAGTTTATCAT
ACATAATTGCAACTAGCACCGAGGTTGCTCATAATCAAATGTATGCGAGTTCCAA--CCATCACAGACTTCAGATATACA
CAAGACATTCTGCCACAGGCCAACATAGTTTTTGTTTGTTTTGCCAAGAAATAACATACCAGTAGTAATTAACATGCCAC
AACAGTTGTATTCTGATTGATACCAAAGCATATTAGCAGACTGGACTCCTTTCTCTTATGTTTTTCTTAAAGGAAACACT
GGCATATTATCTTCTTAACACGTACGTAG----------CTCTCAAAGCATCGCACGGCTGTAAACGCCACCTACACTGT
AACAATTACTGCATCAGCCAACTTTAAGAGGCCTCGCAAACTTAAAACAAGAAGCAGCAGCAGGACCTACAGTATGAGTG
GCAGCTGCGTTTATCAACCTTTCCAGGTATCCTTGATGTTCCTGACCGTCCTCAGCGCTTCAACTGCCGACTTGGCACCA
AATTTTGCCTGCAGAATCAAGGATACAGTCACCAAATGTGTGCCGTTTGTGTTACAAGAAACTGTCTGAGATGGCGCAAG
AGTACAATGCAACGGAAAAACCAAAGAGACCAGATGAGCAGAAACTGGTGAGGAAGAAAAGAAACGACTGAAACTGTACA
GCTAATAAAATTGAAATTAAGAGACTCCTGATGTGCTAGTTCTTATTTGTGAGGCGACAAGTTACTATCTAAAACTGGCG
CTACGAATTACAGAAGATGGTATCATCTAGAAGCATAGTAACTAGCGGGTGTGCTTTACGGACCTGTATTTCAGGCAGAT
CAACACGCATGAAGGTGTTTATCTCAAGCTCATCTCCTATAGTTGAGGGAACCGTCGGTTGATTTGCTTCACGCTGCTTT
TGAGCCCATTCCAGTTTCTGCTTCATTTTTTCGTTCTCTGGCTCGACTGTCAGCATGAATTGTAGGCTCTTTACAGTGTA
CTGTGAGACACGATGAAATAATAAGAGCAGAGTATACATCACTTATCTGTTCAAGCATATCATATTAGCAACACATAACA
CAAATTATTGTTGGGCGCACACATGGAGTTAACAGCAA
>SNPs
---------S-----------------S---S----------------------------------------------S-
S---------S-------S------------------------------------S--S---------------------
------------------S-----SS-------S----S-----S-----------------------S-----------
------------------------------------------------------------------S-------------
--------------------------------------------------------------------------------
-----------S-----------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSS-
-----------SS-S-------------S---------SSS--S-SSSS-SSSSSSSSSSS-----S-------------
-S-----------------S-----SS----------------------------S---S------------SS------
--------------------------------------------------------------------------------
----SS----------------------------------------------------------S---------------
--------------------------------------------------------------------------------
-----------------------------------------------S--------------------------------
--------------------------------------------------------------------------------
---------------------SS----S----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------S-----------------------------------------
--------------------------------------------------------------------------------
------------------------S-------------S---------------SSSSS---------------------
------------------------------------------S------S------------------------------
-----------------------------------------------S---------------------S----------
---------------------------------------------S-------------------------------S--
-------------S-----------------S------------------------------------------------
-----------------S---------------------------------------------S----------------
------------------------------------------------------S-------------------------
-----------------------------------------S-------------------------S---------SSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------S---SS-
-----------S------------------------------------------------------------------S-
-------------------------S---------------------S---S----------------------------
----------------SS-SSSSSSSSSSS--------------------------------------------------
------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------S-------------------
-----------------S-------------------------------------------------------S------
---------------------S-----------------------------------------S------------S---
---------------------------S------------------S---------------------------------
-----------------------------S----------------------------S---------------------
-----------S--------S------------------------------------------------S-SSSSSSSSS
SSSS--------------------------------------------SS--SSSSSS------S---------------
--------------------------------------------------------------------------------
--------------------S--------------------------S--------------------------------
--------------SSSS--------------------------------------------------------------
-----------------------------------------S--------------------------------------
------------------------------S-------------------------------------------------
--------------------------------------------------S-----------------------------
---------------------------S-----------------------------------------S----------
--------------------------------------------------------------------------------
---------S----------------------------------------------------------------------
--------------SS-SS--SSS-SSS-SS-------------------------------------------------
------------------------------------------S-------------S-----------------------
--------S------------------------------------------S----------------------------
-----------------------------------------------------------------------------SSS
SSSSSSS-----S---S------S-S------------------------------------------------------
------------------------------------------------------S-------------------------
---------------------------------S----------------S----------------S-----S-----S
S----------S---SSS--------------------------------------------------------------
-------------------------------------------S-S---------------------------------S
-----------------------------------------------S--------------------S-----------
--------------------------------------------------------------------------------
-------------------------------------------------------SS-----------------------
------S------------------------------S----------------------S-S-----------------
-------------------S----S-------------------------------------------------------
-----------------------------------S--------------------------------------------
------------------------S------S---------------------------------------------S--
--------S-----------------------------------------------------------------------
--------------------------------------------------S-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------S---------------------
-------------------------------------------------------------------S------------
--------------------------------S-----------------------------------------------
--------S--S---------------------------------------------------------S----------
---------------S--S-------------------
>forward_479
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------TGTAAATTTAGCGCGCCTGC-
--------------------------------------------------------------------------------
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>reverse_2010
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---------GGGGAGGGGTCATGTAGAGA---------------------------------------------------
--------------------------------------------------------------------------------
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>forward_1998
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----------------------------------------------------------AGATGTTTGTGTGCGTGTGC--
--------------------------------------------------------------------------------
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>reverse_3670
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---------------------------------------------------------------------CTGAATGCTGA
CGTGATGGC-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------
>forward_2332
--------------------------------------------------------------------------------
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------------------------------------------------------------------------CTGCGTGA
CTAGCTATGGGG--------------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_4418
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-----------------AGCCACTTTCGGACCGTTC--------------------------------------------
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>forward_2742
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-CGTTGCAGGAGAGACAGACTT----------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_4560
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-------------------------------------------------------------------------------A
CTCCAGCAAGTTCACTCCG-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------
