>input_sequence_24202
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-----------------------------------ATGGGCGGCGGCAGCAGATCGCGCGCGAAGGAGGCCGAGGGCGAG
TCGGAGGTCCGGCCGGGCGGGATGTTCGTGCAGCGCAGGGACGGCGAGGAGGGGCCCACCGTCAGGCTCAGGGTGTCCCA
CGGCCCCGCCCTGCGCGACGTCTTCGTGCCGGCGCAGGCCACCTTCGGTACGTCGCCTCTTCTTCC---TTGATCCGACG
CCCTTGTCCGTGGCAATTTGTCCTAT----TGTATTGTAATGATGAGATGATACGTAATGCTCT----------------
------GTTCCGATTTGAGATGTGGTCTTTGCTGCGGTGCGCGCTCAGCAAGTGCTTGTCGTTTCCCCGGAATTACTAAG
CTGGCAGATGTCGTGTTGTTTAGCTGCGTTGAGCTTAGATCTTGGCTGGTCAACTGCGAATTTTGTCAAGTAGTATGTGA
ATGAAAATCACATCATTCTTCTTTCCTATGGATCAAATTGGGTGAC-----------AGATTAAGAACAAAATCCAATTG
GACGACTG----AACAAGCCTAGATTAACAATAAAATCAAATTGGCTGAT----TAAACAAGTCTAGATTAAGAACAAAA
AAAATCTCTGTATC--------------------------------------GGTAGCCTATGTATCATGTGCCTGCTAT
TCAACTACTACTTACTTTACT---TTGTTGGATTGTGACAGGTAGACTTACGTTGGTAGATGTACTGTTTGACCTTCTAA
CTTAAATCCATTTCAGGGTAATTAGTCCCATTCGTTCAACATCAGGCCTACAATTAAT-ATGGTTGTACTGTTGCATTAA
TACAGTAGTGTTCCGATCGATAGGGATTGGTTACTGCTCATCAAAGGATGTTATGTGAATTTCTTATCTACTCCCTCCAT
CTCATAATATAAGAGCATTTTTGACACTACACTAGTGTCAAGAACGCTCTTATATCATGGGACGGAGGGAGGAAGCCTCT
AACCCATCCTGAAGAAGTTTAATTTTGATGGTGCATCTGCACTGAATTTAACTTTTGAAAGAAAGTTTGGATCGAGTTGT
TGGAGTAACATCTTATAA-TCCTTGCTTCGATGACCTCAATTCCAC-------------------------TCTGATTTG
TGTGAAGGTGAACTGAAGAGGATCCTCGCCCAGACTACTGGTTTGGAGCCAGAGAGACAGAGGCTCTTCTTCCGTGGGAA
GGAGAAGAGGGACGATGAATTCCTGCACGCATCAGGCGCCAAGGATGGAGCAAAACTGCTTCTGCTTGAGAAACATGTCC
CTGCCAATGTGGAACAGAAGGTCGAGCCAGTGATGATGGATGAGAGCATGATGAGGGCTTGTGAGGCTGTTGTTCGTGTC
AGATCTGAAGTTGATAAACTCTCTGCTAAGGTGAAGGAACAATACTTGCCGCACCTGGTTTGTACTCCCTCCGTCCCATA
ATCGTCTTACATTGTGGGACGGAGGGAGTAAGATG-TTTGTGCTGCTCACACTACTGTACTGATGCATTTAATTTGTTTT
TGTTCTGTAATAGGTGTGTGAGTTGGAGAAGAGTGTCCTTGCAGGGAAGAAGGTCGAGGATAAAGAATTTGTTGTCTTGA
CGGAGCTGCTTATGGTGCAGCTGCTGAAACTCGATGGCATAGAGGCAGAGGGGGAAGCAAGGGCACAAAGGAAGGCCGAG
GTACACTTCCTTGCTGTTAATTTCCGAACCTGATTAATCATGAGTTATCCGATTACATGCTTTATTAAAACACGTACAGA
AACTAAAACATTTGTTGTTCAAGACAAGATAGATTATTTATGTCACACATTAGCCAGGACGTGATCTTGCTCAAAAAATT
GTTCAAAACGAAGAGGACTGTTGCATAATTTTTAATTCATTTATGATAGTGATCCAATAGATGCTAATAACCCAGCACAA
TTATTTCCTGATGGTTTATACAGTTAAACATATCTATCATGAGTTTGGAGATTTCCTCATACCAAGTAAACTAGCATCTG
TAATGATCCAATCTGGCAGTGACATTTATA----------------ATCTCGGTAAGAAACACTTGGCATGTCTGCCATT
CAAAGGCTGCACCTCAGTAGTTTTTCTGTTGTGTTGAATCAGTCTTTCACTGCTCTCACCTAGCAGTGACTGTTATAGGA
CATTTCATC---TAACTCTTACAATTTCATTGTGGGTTAAGGGCCATGTACTCATGTCTGTCTTGCTCGGTTATTACAGT
AATACATTACTCCGGTTATGTAATAACGGTCTGTTCAGTCTCAAGTTTGTAGCCCTCAAAAATCATTTCCACTAGTTTAA
TCTTGTCCGGTTACTTCTTGTGGAAGAGAGACTCAAACATGCAAAGTCCTAGGTTTACCGGGCTGTGTCGCCCGAATTTA
GCTGCTAAACTCAGCTTAGGCAGAAAAATCTTTGCCCCATGTTGCATAATCCCTTGGGTTTATTTTCTCAAGTTGTGTTC
GTTTATAAAACTATAAAATATGTGCAGTTTCCTCCCTTTTTTCTGCTGTAATGTTAATTTATCGGTTTATCCTGGATGAA
TAAGATCGGCGAAATCATCTACAGATGTAACTTCCAAAATTCAAGTAAAATATTTCATTGAGGAGATTATACACAAGGTG
TACTGCAAAATGAATAATGACACT-----------------------------------------------------GGG
CCAACACAATTTTGATTTTTCAGCTTTACATAGTCAAAATGAG--------------TAATTGAGAGACATATTGGTCAG
ATAATTTGCCAATGGGGTTGGTCATTATGAATAAAATCAGTGAATAAAATCCCTGTCATGTCCATTTGTAATAATAGTAA
AGAAAATAAAATAATACTTCCTTTGTTCCAAAATACATGCCGTGGTTTTAGTTCAAACCACAACA-AGTATTTTGGAACG
GAGGGAGTACATACCAACCTTTGCATTTTTCAAATAAAGACTAACCTTTGCATAAATGATACTTATACAATGTTGTATTG
AAACTCCCAGGTGCGCCGAGTTCAGAATCTTGTTGAGACCTTGGACAAGCTGAAGGCAAGGAATGCCAACCCTTCCAGTG
ATAGCGCCAAATCTGTTTCGGTGTCAACCGAGTGGGAGACGTTCGAAAATGGCATGGGCAGCTTGAATGCTCCGCCGGCC
CGATTTTCTTCGACGCAAAATGACACTGACTGGGAGCAGTTCGACTAG--------------------------------
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------------------------------------------------------------------------------
>chr3B_1_TraesCS3B01G383300
CCTTCTAGACTCATCATCATGGCTTCGCCATCTCCAAAGTCGACGCTAAGTGTTGCACGGACATGAATGCATTTTCTAA-
-TTCTGGTGTTTTTTACTATCTTAATAG-TGATGAATAGATCGAATGTTTTCCAAAAATAACTCCATCACGGAGATTGTA
GAGAGTTCGGCTCGGTGCTCCAGATCACT----------------GATGGAAACTAGATA--------------------
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-------------------------------------------------------------------------ATTCATG
CTAAGCATTGATCTAGAGATTAAATGTTTGAGCCACTAACTTAAGTATATTGCTGTGAT---------------------
-------------------------------------------------TTTTTGTCCCTGTAGAC--------------
---ACATTTACCAGTAGGATCAACGCACTAGAATAATAACCATCATCGATGAAAAGAAGTGTACATTAAAAGAATCTAAC
TTACAGACACACAAGCGCGGACGAATAAATCGAATTCAAATGAATCCATTAAAGATAAACACTGACCG------------
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---------------------------------------AATCCGACGAGATGCAAATTCTTTGAATCATCACC------
-----TCCAAACCGTCAAGGAGATCGTAGAGAGTTCGGCTCGGTGCTCTAGACCCCA-----------CCACCACGCAAA
CAGTTCGACGAACGTGTCACGAGGCCGGCC-GGGGGCGCCAAGCCCAAACAAACGAGTGACCACAAATCGACCGCCCCCA
CGAGGCGGCAGCGCAGGCGCGTACGGGCCAACCAAATCCAGGCGGAGCCAGTAGCTTCCCCCACCGCCCCAG--CCGGTG
GCGTCACGAGGATCCAAAGTTGTACTTGGCCAACGC-AAAACGCACAAGCCTTCCTTCCTC-CCTTCCTTCCTTCGCCGA
AACCTTACTCTCCACCTTCCCCCATCCCCCATCCGCCGTCTCCCCACCCTCCTCCTCGCTCCTTCCCCTTGCTTCTCCGG
GAGGGAAGGAACCC-----------------------GCGACCGCCCG--CCCACCCTCCGCAAAAGCCACGCGCCACCA
ACCCCCT---------CCGCCCCGCCCCGCGCGTCGCTTTCGCCTTTCTCCACGCGACCGAAAGAA----ACCGAGAGGC
CCATAAAAGAGGGGGAGGCGCCGAGACCGGCGGCGATGGGCGGCGGCAGCAGATCGCGCGCGAAGGAGGCCGAGGGCGAG
TCGGAGGTCCGGCCGGGCGGGATGTTCGTGCAGCGCAGGGACGGCGAGGAGGGGCCCACCGTCAGGCTCAGGGTGTCCCA
CGGCCCCGCCCTGCGCGACGTCTTCGTGCCGGCGCAGGCCACCTTCGGTACGTCGCCTCTTCTTCC---TTGATCCGACG
CCCTTGTCCGTGGCAATTTGTCCTAT----TGTATTGTAATGATGAGATGATACGTAATGCTCT----------------
------GTTCCGATTTGAGATGTGGTCTTTGCTGCGGTGCGCGCTCAGCAAGTGCTTGTCGTTTCCCCGGAATTACTAAG
CTGGCAGATGTCGTGTTGTTTAGCTGCGTTGAGCTTAGATCTTGGCTGGTCAACTGCGAATTTTGTCAAGTAGTATGTGA
ATGAAAATCACATCATTCTTCTTTCCTATGGATCAAATTGGGTGAC-----------AGATTAAGAACAAAATCCAATTG
GACGACTG----AACAAGCCTAGATTAACAATAAAATCAAATTGGCTGAT----TAAACAAGTCTAGATTAAGAACAAAA
AAAATCTCTGTATC--------------------------------------GGTAGCCTATGTATCATGTGCCTGCTAT
TCAACTACTACTTACTTTACT---TTGTTGGATTGTGACAGGTAGACTTACGTTGGTAGATGTACTGTTTGACCTTCTAA
CTTAAATCCATTTCAGGGTAATTAGTCCCATTCGTTCAACATCAGGCCTACAATTAAT-ATGGTTGTACTGTTGCATTAA
TACAGTAGTGTTCCGATCGATAGGGATTGGTTACTGCTCATCAAAGGATGTTATGTGAATTTCTTATCTACTCCCTCCAT
CTCATAATATAAGAGCATTTTTGACACTACACTAGTGTCAAGAACGCTCTTATATCATGGGACGGAGGGAGGAAGCCTCT
AACCCATCCTGAAGAAGTTTAATTTTGATGGTGCATCTGCACTGAATTTAACTTTTGAAAGAAAGTTTGGATCGAGTTGT
TGGAGTAACATCTTATAA-TCCTTGCTTCGATGACCTCAATTCCAC-------------------------TCTGATTTG
TGTGAAGGTGAACTGAAGAGGATCCTCGCCCAGACTACTGGTTTGGAGCCAGAGAGACAGAGGCTCTTCTTCCGTGGGAA
GGAGAAGAGGGACGATGAATTCCTGCACGCATCAGGCGCCAAGGATGGAGCAAAACTGCTTCTGCTTGAGAAACATGTCC
CTGCCAATGTGGAACAGAAGGTCGAGCCAGTGATGATGGATGAGAGCATGATGAGGGCTTGTGAGGCTGTTGTTCGTGTC
AGATCTGAAGTTGATAAACTCTCTGCTAAGGTGAAGGAACAATACTTGCCGCACCTGGTTTGTACTCCCTCCGTCCCATA
ATCGTCTTACATTGTGGGACGGAGGGAGTAAGATG-TTTGTGCTGCTCACACTACTGTACTGATGCATTTAATTTGTTTT
TGTTCTGTAATAGGTGTGTGAGTTGGAGAAGAGTGTCCTTGCAGGGAAGAAGGTCGAGGATAAAGAATTTGTTGTCTTGA
CGGAGCTGCTTATGGTGCAGCTGCTGAAACTCGATGGCATAGAGGCAGAGGGGGAAGCAAGGGCACAAAGGAAGGCCGAG
GTACACTTCCTTGCTGTTAATTTCCGAACCTGATTAATCATGAGTTATCCGATTACATGCTTTATTAAAACACGTACAGA
AACTAAAACATTTGTTGTTCAAGACAAGATAGATTATTTATGTCACACATTAGCCAGGACGTGATCTTGCTCAAAAAATT
GTTCAAAACGAAGAGGACTGTTGCATAATTTTTAATTCATTTATGATAGTGATCCAATAGATGCTAATAACCCAGCACAA
TTATTTCCTGATGGTTTATACAGTTAAACATATCTATCATGAGTTTGGAGATTTCCTCATACCAAGTAAACTAGCATCTG
TAATGATCCAATCTGGCAGTGACATTTATA----------------ATCTCGGTAAGAAACACTTGGCATGTCTGCCATT
CAAAGGCTGCACCTCAGTAGTTTTTCTGTTGTGTTGAATCAGTCTTTCACTGCTCTCACCTAGCAGTGACTGTTATAGGA
CATTTCATC---TAACTCTTACAATTTCATTGTGGGTTAAGGGCCATGTACTCATGTCTGTCTTGCTCGGTTATTACAGT
AATACATTACTCCGGTTATGTAATAACGGTCTGTTCAGTCTCAAGTTTGTAGCCCTCAAAAATCATTTCCACTAGTTTAA
TCTTGTCCGGTTACTTCTTGTGGAAGAGAGACTCAAACATGCAAAGTCCTAGGTTTACCGGGCTGTGTCGCCCGAATTTA
GCTGCTAAACTCAGCTTAGGCAGAAAAATCTTTGCCCCATGTTGCATAATCCCTTGGGTTTATTTTCTCAAGTTGTGTTC
GTTTATAAAACTATAAAATATGTGCAGTTTCCTCCCTTTTTTCTGCTGTAATGTTAATTTATCGGTTTATCCTGGATGAA
TAAGATCGGCGAAATCATCTACAGATGTAACTTCCAAAATTCAAGTAAAATATTTCATTGAGGAGATTATACACAAGGTG
TACTGCAAAATGAATAATGACACT-----------------------------------------------------GGG
CCAACACAATTTTGATTTTTCAGCTTTACATAGTCAAAATGAG--------------TAATTGAGAGACATATTGGTCAG
ATAATTTGCCAATGGGGTTGGTCATTATGAATAAAATCAGTGAATAAAATCCCTGTCATGTCCATTTGTAATAATAGTAA
AGAAAATAAAATAATACTTCCTTTGTTCCAAAATACATGCCGTGGTTTTAGTTCAAACCACAACA-AGTATTTTGGAACG
GAGGGAGTACATACCAACCTTTGCATTTTTCAAATAAAGACTAACCTTTGCATAAATGATACTTATACAATGTTGTATTG
AAACTCCCAGGTGCGCCGAGTTCAGAATCTTGTTGAGACCTTGGACAAGCTGAAGGCAAGGAATGCCAACCCTTCCAGTG
ATAGCGCCAAATCTGTTTCGGTGTCAACCGAGTGGGAGACGTTCGAAAATGGCATGGGCAGCTTGAATGCTCCGCCGGCC
CGATTTTCTTCGACGCAAAATGACACTGACTGGGAGCAGTTCGACTAGCATGAGAATGTGCATTCTCGATGTATTATTAT
GTAACTTGCGACGAAAGCTACTGTGTGCATGTATGAAGTATGGTGCCTCTTGCCACTCCACTGCCTGTGAGATTGTTGCC
AGATGATGCTGGTGAATTGCTCTGCAAAATCGTTATGCTTTCAAGTTCTCCAATGCTCTTGGCACGGCGTGTGGTACCTG
GTAAACTAGTTGCCAGGTGTGTGAGCATGTAGCTGGAAACGAATCAGACGTTAACCTAAGCCATAGTCTGGTCGTGATTG
CCGAGCCGAAAGATT--CATGCTTCAGAACAAACATGTCAAGCAGGAACTGAATTTAATCTAAAAAGAAGGGCGAGAGCT
TAAATTGACAGAGCGAAGAGCAAAGCACATGTAAAGGCTAAAGCTATGGTGCATTTGTCTCTTAACA-------------
------------AAAAGATTGAGCTACGAATATCCCTTCTGTGGCTTGTACGTAGATACCGTCGAGTTCATC--------
-----TGGC-----------------------------------------------------------------------
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---------------------------------------GAAAGAACGAGGGGCGCCTCTTGCTCTATCTACTACTACAA
CTGAACGGTGATGCCTCTAGCTCCCATGGCTGCCAGACGCTGGTCGACCGACTGGTCCCCGACCTCGGTGGCCCTCGCTG
CCGCACGCCGGGACACATCGAACCGCTCGCCGTCTCCCCAGAGCGCGTAGGCCTCCTCGCCGTGCGCCGCGTCGTCGCCG
ATCCTGAGCTGCTCGTCGGGCATCCGCAGCGGGATGACGAGGCCCACGGCGAGGATGATGCCGGTGGTGACCGCGACGTT
CCACGCGACGACGAAGAGCGCTGCGGCCAGCTGCTTGCCCACCTGCTGGATGCCGCCGCCATAGAAGGCGCCGCGCGTGC
CAGGGACGTGGGTGTGCAGGGTGGTGAGCTCCGGGGTGGCGAGGAGCCCCGTGAGGACGCCGCCGAGGAGCCCGGCGACG
GCGTGGGTGTGGAACACGGCGAGGGTGTCGTCCACCTTCTGGAGGAGGAAGGAGCGCTTGTGGAGGACCATCATGGTG
>chr3D_1
CCTTTTAGACTCATCATCATGGCTTGGCCATCTCCAAAGTTGTCGCTAGGTGTTTCACGGACATGAATGTATTTT-TAA-
-TTCTGATGTTTTTTACTATCTTAATAATTGATGAATAAATTGAATGTTTTCCAAAAAAAATTCCATCACGGAGATTGTA
GAGAGTTCGGCTCGGTGCTCTAGATCACTACTGCCTGCAGTCTTAGATGGAAACTAGATA--------------------
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-------------------------------------------------------------------------ATTCATG
CCAAGCATTGATCTAGAGATTGGATGTCCGAGCCACTAACTGAAGTGTAAAACCATGAATTTCTTTTTTTTTGCGAACAA
AGAGGATTGTATTAATCAAAGGAGATCATTACAACAGAAAACCGTGATATTTTTGTCCCCGTAGACTGCAGTAATGCACG
GACACATATACTAGTAGGTCCAACACACCAGAATAATAACCACCATCGATTAAAAAAAGTGTAGATCGAAAGAATCTAAC
CTGCAGACACACAAGCGTGGACGAACAAATCGGATCCAAATGGGTCCATCGAAGAGATCCGACGAGCGAACCAAACTGTG
GTTGGATGGTTAAAGGGATTCAAATCTGGTGCTCGCATTTATTTCTGGATTTATTTTAAGATTTTCGGTGATGCGCATTT
AATGGGAGGAGACGTTTCCATCAACGACGAGGTCCCTACGATGACTTTGTAAATTTCAAGATAATATGCCGGCTCAATCT
TTCAAAGACGCTTGCATTTGTACTGTTTTCAGAAAAAGAGATCCGACGAGATGCAAATTCTTCGAATCATCACC------
-----TCCAAACCGTCGAGGAGATCGTAGAGAGTTCGGCTCGGTGCTCTAGACCCCACCCGCACCCCACCACCACGCAAA
CAGTTTGACGAACGTGTCACGAGGCCGGCCGGGGGGCGCCAAGCCCAAACAAACGAGTGACCACAAATGGACCGCCCCCA
CGAGGCGGCAGCGCAGGCGCGTACGGGCCAACCAAATCCAGGCGGAGCCAGTAGCTTCCCCCACCGCCCCAG--CCGGTG
GCGTCACGAGGATCCAAAGCTGTACTTGGCTAACGC-AAAACGCACAAGCCTTCCTTCCCTTCCTTCCTTCCTTCGCCGA
AATCCTACTCGAGACCCAACCCCTCCCCCCATCCGCCGTCTCCCCACCCTCCC---CGCTCGTTCCCCTTGCTTCTCCGG
GAGGGAAGGAACCC-----------------------GCGAGGCCGGCCTCCCACCCTCCGCAAAAGCCACGCGCCACCA
ACCCAACCCCTCCGCCCCGCCCCGCCCCGCGCGTCGCTTTCGCCTTTCTCCGCGCAACCGAAAGAGACCGACCGAGAGGC
CCATAAAGA---GGGAGGCGCCGAGGCCGGCGGCTATGGGCGGCGGCAGCAGATCGCGCGCGAAGGAGGCCGACGGCGAG
TCGGAGGTCCGGCCGGGCGGGATGTTCGTGCAGCGCAGGGACGGCGAGGAGGGCCCCACCGTCAGGCTCAGGGTGTCCCA
CGGCCCCGCCCTGCGCGACGTCTTCGTGCCGGCGCAGGCCACCTTCGGTACGTCGCCCCTTCTTCTTCTTTGATCCGACG
CCCTTATCCTTATCAATTTGTCCTGTTGTATGTATTGTAATGATGAGATGATGCGTAATGCTCAGTTCCGATTTGTCTCG
TGATCAGTTCCGATTTGAGATGTGGTCTTCGCTGCGGTGCTCGCTCAGCAAGTGCTTGTCGTTTCCCCGGAGTTACTAAG
CTGGCAGATGTCGTGTTGTTTAGCTGCGTTGAGCTTAGATCTTGGCTGGTCAACTGCGAATTTTGTCAAGTAGTATGTGC
ATGTAAATCACATAATTCCTGTTTCCTATGGATCGAATTGGGTGACTAAACAAGCCTAGATTAAGAACAGAATCCAATTG
GGTGACTATATAAACAAGCCTAGATTAAGAACAGAATCCAATTGGATGACTATATAAACAAGCCTAGATTAAGAACAAAA
TCAAATTGGGTGACTACACAAACCTAGATTAAAAACATTA--AGCACCAGTAGGTGGCCTATGTATCATGTGCCTGCTAT
TCAACTAGAAGTATTAACTTTGCGTTGTTGTACTGTGACAGGTAGACTTACATTTGTAGATGTCTTGTTTGACCTTCATA
CAATAATCCTTTTCAGAGTAATTGTTCCCACTCGTTCAACATCAGGCCTACAATTAATTATGGTTGTACTGTCGCATTAT
TACAGTAGTGTTCCGGTCGAAAGGGATTGGTTACTGCTCACCAAAGGATGTTATATTAATTTCTTATCT-----------
------------------------------------------------------------------------AAGCCTCT
AACCCATCCCAAAGAAGTTTAACTTTGGTGGTGCATCTGCACTGAATTTAACTTTTGAAAGAACGTTTGGATCGAGTTGT
TGGAGTAACATCCTATATCTCCTTGCTTGGAGGACCTCAATTCCACAAACACTAGGTAGTTGAAACTGATTTCTGATTTG
TGTGAAGGTGAACTGAAGAGGATCCTCGCCCAGACTATTGGCTTGGAGCCTGAGAGACAGAGGCTCTTTTTCCGTGGTAA
GGAGAAGAGGGACGATGAATTCCTGCACGCATCAGGCGCCAAGGATGGAGCAAAATTGCTTCTGCTTGAGAAACATGTCC
CTGCCAATGTGGAACAGAAGGTCGAGCCAGTGATGATGGATGAGAGCATGATGAGGGCTTGTGAGGCTGTTGTTCGTGTC
AGATCTGAAGTTGACAAGCTCTCTGCTAAGGTGAAGGAACAATACTTGCCGCACCTGGTTTGTACTCCCTCCGTCCCATA
GTCGTCTTGCATTGTGGGACGGAGGGAGTAAGATAATTTGTGCTGCTCGCACAACTGTACTGATGCATTTAATTTGTTTT
TGTTCTGTAATAGGTGTGTGAGTTGGAGAAGAGTGTCCTTGCAGGGAAGAAGGTCGAGGATAAAGAATTTGTTGTCTTGA
CGGAGCTGCTTATGGTGCAGCTGCTGAAACTCGATGGCATAGAGGCAGAGGGAGAAGCAAGGGCACAAAGGAAGGCCGAG
GTACACTTCTTTGCTGTTACTTTCCAAACCTGATTAATCACGAGTTATCCGATTACATGCTTTATTGAAACATGTACAGA
AACTAACACATTTGTTGTTCAAGACAAGATAGATTATTTATGCCACCCATTAGCCAGGACATGTTCTTGCTCAAAAGTTT
GTTCAAAACAAAGAGCACTATTGCATAACTTTTAATTCATTTATGATAGTGATCCAATAGATGCTAATAACCCAGCACAA
TTATTTCCTGATGGTTTATACAGTTAAACATATCTATCATGAGTTTGGAGATTTCCTCATACCAAGTAAACTAGCA-CTG
TAATGAT-CAATCTGTCAGTGACATTTATAGGATCTTGGTTTGAAAATCTCGGTAAGAAACACTTGGCATGTCTGCCATT
CAAAGGCTGCACCTCAGTAGCTTCTCTGTTGTGTTGAATCAGTCTTTCACTGCTCTCACCTGGCAGTGACTCTTATAGGA
CATTTCATCTAATAACTCTTATAATTACA-TGTGGGTTAAGGGTCATGTACTCATGTCTGTCTTGCTCGGTTATTACAGT
AACACAGTACTCCG-TTATTTTATAACGGTACGTTCAGTCTCAAGTTTGTAGCTCTCAAAAATCATTTCCACTAGTTTAA
TCTTGTTC--------------------------AAACATGCAAAGTCCTAGGTTAACCGGGCTGTGTCGTCCAAATTTA
GCTGCTAAACTCATCTTAGGCAGAAAAATCTTTGCCCCATGTTGGATAATTCCTCGGGTTTATTTTCTCAACTTGTGTTC
GTTTATA-AACTATAAAATATGTGCAGTTTCCTCCCTTTTTTCTGCTGCAATGTTAATTTATTGGTTTATTCTGGATGAA
TAAGATCGGCGAAATCATCTGCAGATGTAACTTACAAAATTCAAGTAAAA------------------------------
-----------------------T-----------------------------------------------------GGG
CCAACGCAATTTTGATTTTTCAGCTTTACGTAGTCCTGATTTTGTCTTCTTGTGATATAATTGGATGACATATTGGTTGG
ATAATTTGCCAATGGGGTTGGTCACTATGAATAAAGTCAGTGAATAAAATCCCTGTCATGTCCATTTATAATAATAGTAA
AGAAAAAAAAATA---CTTCCTCTGCTCCAAAATACTTGTTGTGGTTTTAGTTCAAACC---ACA-AGTATTTTGGAACG
GAGGGAGTACATACCGACCTTTGCATTTTTCAAATAAAGACCAACCTTTGCATAAATGATACTTATACAATGTTGTGGTG
AAACTCCCAGGTGCGCCGAGTTCAGAATCTTGTTGAGACCTTGGACAAGCTGAAGGCAAGGAATGCCAACCCTTTCAGTG
ATAGCGCCAAATCTGTTTCGGTGTCGACCGAGTGGGAGACGTTTGAAAACGGCGTGGGCAGCTTGAATGCTCCGCCGGCC
CGATTTTCTTCGACGCAAAATGACACTGACTGGGAGCAGTTCGACTAGCATGAGAATGTGCATTCTCGATGTATTATTAT
GTAACTCGCGACGAAAGCTACTGTGTACATGTATGAAGTATGGTGCCTCTTGCCACTCCACTGCCTGTGAGATTGTTGCC
AGATGATGCTGGTGAATTGCTCTGCAAAATCGTTATGTTTTCAAGTTTCACAATGTTCTTGCCATGGGGCGTGGTAGCTG
GTAAACTGGTTCTGCTAACATTCAATTTAAAACACGTGCCAGGTCCA---------------------------TGATTG
CTGAACCGAAGGCATTCCATGCTTGACAACAATAACTGCATTT---------ATTTAATCTAGAAAGAAGTTCAAGAACT
G-AACAAAAACCGAAAACTCT---------------------------GTTGCATATTGTAGGAAAGTACAAATGTCCCT
TCTGAAATTAGCAAAAGATTGAACTACGAATATCCCTTCTGTGTTGCCTAGTCACCAGCTTCTACAGTTCTACTACAACT
GCCCTTGGA-----------------------------------------------------------------------
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---------------------------------------AAAAGAACAACGGGCACCAGCTT---------CTACTACAA
CTGAACGGTGATACCTCTAGCTCCCATGGCTGCCAGACGCTGGTCCACCGACTGGTCGCCGACCTCGGTGGCCCTCGCTG
CCGCGCGCCGTGACACGTCGAACCGCTCGCCGTCGCCCCAGAGCGCGTAGGCCTCCTCGCCGTGCGCTGCGTCGTCGCCG
ATCCTGAGCTGCTCGTCGGGCATCCGCAGCGGGATGACGAGGCCCACGGCGAGGATGATGCCCGTGGTGACCACGACGTT
CCACGCGACGACGAAGAGCGCCGCGGCCAGCTGCTTGCCCACCTGCTGGATGCCACCGCCGTAGAAGGCGCCGCGCGTGC
CCGGGACGTGGGTGTGCAGGGTGGTGAGCTCCGGGGTGGCGAGGAGCCCCGTGAGGACGCCGCCGAGGAGCCCGGCGACG
GCGTGGGTGTGGAACACGGCGAGGGTGTCGTCCACCTTCTGGAGGAGGGAGGAGCGCTTGTGGAGGACCATCATGGTG
>chr3A_1
CCTTATAGACTCATCATCATGGCTTCGCCATCTCCAAAATCGTCGCTAGGTGTTTCACGAATATGTATGTATTTT-TTTA
GTTCTGGTGTTTTTTACTATCTTAATAGTTGATGAATAGATTGAATGTTTTCCGAAATAAAAACGTC------------A
GATAGTTCAGCTTGGTGCTCTAGATCACTGTTGCCTGCAGTCTTAGATGGAAACTAGATATACTCTCTCCATTTCATAAT
GTAGTGCTTTCTCTATTCCCGTGCTTCAACTTTAACCGTAAATTTAACTACCAAGACCGATTGCGGCGGGAGCAAAAGTT
ATATCAGTGAATTCGTATTCGAAAGAAATTTTTAATTATGTAACTTTTTCTCCCGTTGCAGTCGGTCTCGTTCGTTAAAT
TTATGGTCAAAGTTCGACCTCGGAAAGCGCGGGCACACTATATTTTGGAATGGAGGGAGCATGGATTAAAGAAATTCATG
CTAAGCATTGATCTAGAGATTGGATGTCTCAGCCACTGACTTAAGTGTAGAACCATGAT---------------------
-------------------------------------------------ATTTATTAATACG------------------
------------------------ACACGAGAACAACAACCGTCATCGATAAAAACAAC-GTAGATTAAAAGGATTCAAC
CTGAAGACACACGAGTGCGGCGAGCGAATCGG--TTCAAGTGAATTCACGGAAGACAACCATGGACCG------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------GATCCCACAAGATGCAAATTCTTCGACTCATCATGGCTTTG
CCATATCCAAGCCGTCGAG-------------------------------------------------------------
-------------------------------------------------------------------------GCCCCCA
CGAGGCGGCAGCGCAGGCGCGTACGGGCCAACCAAATCCAGGCGGAGCCAGTAGCCTCCCCCACCGCCCCCCACCCGGTG
GCGTCACGAGGATCCAAAGCTGTACTTGGCCAACGCAAAAACGCACAAGCCTAG--------CCTTCCTTCCTTCGCCGA
AACCTTGCTTCCCCTCCA---CCTGCCCCCATCCGCCGTCTCCCCACCCTCCTCCTCGCCCCTTCCCCTTGCTTCTCCGG
GAGGGAAGGAACCCACCCGCGACCCGACCGCTGGCGGGCGAGGCCGGCCTCCCACCCTCCGCAAAAGCCACGCGCCACCA
ACCCCCT--------------CCGCCCCGCGCGTCGCTTTCGCCTTTCTCCGCGCAACCGAAAGGA----ACCGAGAGGC
CCATAAAAGAGGA---------------GGCGGCGATGGGCGGCGGCAGCAGATCGCGCGCGAAGGAGGCCGACGGCGAG
TCGGAGGTCCGGCCGGGCGGGATGTTCGTGCAGCGCAGGGACGGCGAGGAGGGCCCCACCGTCAGGCTCAGGGTGTCCCA
CGGCCCCGCCCTGCGCGACGTCTTCGTGCCGGCGCAGGCCACCTTCGGTACGGAGCCTCTTCTTCTTATTTGATCCGACG
CCCTTATCCTTTGCAATTTGTCCTGTTGTATGTATTGTAATGATGAGATGAAACGTAATGCTCTGTTCCGATTTGTCT-G
TGATCAGTTCCGATTTGAGATGTGGTCTTTGCTGCGGTGCTCGCTCAGCGAGTGCTTGTCGTTTCCCCGGAGTTACTAAG
TCGGCAGATGGCGTGTTGTTTAGCTGCGTTGAGCTTAGATCTTGGCTGGTCAACTGCGGATTTTGTCAAGTAGTATGTGC
ATGTAAATCACATAATTCCTGCTTCCTATGGATCGAATTGGGTGACTGAGCAAGCCTAGATTAAGAACAGAATCCA----
----------------------------------------ATTGGATGACTATATAAACAAGCCTAGATTAACAACAAAA
TCAAATTGGGTGACTAAACAAACCTAGATTAAAAACATTATAAGCACCAGTAGGTGGCCTATGTATCATGTGCCTGCTAT
TCAACTAGAAGTATTAACTTTGCGTTGTTGTACCGTGACAGGTAGACTTACATTTGTAGATGTCTTGTTTGACCTTCATA
CAAAAATCCTTATCAGAATAATTGTTCCCATTCGTTCAACATCAGGCCTACAATTAATTATGGTTGTACTGTCGCATTAT
TACAGTAGTGTTCCGGTCGAAAGGGATTGGTTACTGCTCATCAAAGGATGTTATATGAATTACTTATCT-----------
------------------------------------------------------------------------AAGCCTCT
AACCCATCCCGAAGAAGTTTAACTTTGGTGGTGCATCTGCACTGAGTTTAACTTCTGAAAGAAAGTTTGGATCGAGTTGT
TGGAGTAACATCCTATATCTCCTTGCTTGGAGGACCTCAATTTCACGAACACGAGGTAGTTGAAACTGATTTATGATTTG
TGTGAAGGTGAACTGAAGAGGATCCTCACCCAGACTACTGGCCTGGAGCCTGAGAGACAGAGGCTCTTTTTCCGTGGTAA
GGAGAAGAGGGACGATGAATTCCTGCACGCATCAGGCGCCAAGGATGGAGCAAAATTGCTTCTGCTTGAGAAACATGTCC
CTGCCAATGTGGAACAGAAGGTCGAGCCAGTGATGATGGATGAGAGCATGATGAGGGCTTGTGAGGCTGTTGTTCGTGTC
AGATCTGAAGTTGACAAGCTCTCTGCTAAGGTTAAGGAACAATACTTGCCGCACCTGGTTTGTACTCCCTCCATCCCATA
GTCGTCTTGCATTGTGGGACGGAGGGAGTAAGAT-ATTTGTGCTGCTCACACAACTGTACTGATGCGTTTAATTTTTTTA
TGTTCTGTAACAGGTGTGTGAGTTGGAGAAGAGTGTCCTTGCAGGGAAGAAGGTCGAGGATAAAGAATTTGTTGTCTTGA
CGGAGCTGCTTATGGTGCAGCTGCTGAAACTCGATGGCATAGAGGCAGAGGGAGAAGCAAGGGCACAAAGGAAGGCCGAG
GTACACTTCCTTGCTGTTACTTTCCGAACCAGATTAATCATCAGTTATCCGATTACAAACTTTATTGCAACACGTACAGA
AACTAAAACATTTGTTGTTCAAGACAAAATAGATTATTTATGTCACCCATTAGCCAGGACATGTTCTTGCTCAAAAGTTT
GTTCAAAACAAAGAGGACTATTGCATAATTTTTAATTCATTTATGATAGTTATCCAATAGATGCTAATAACCCTGCACAA
TTATTTCCTGATGGTTTATC------------------------------------------------------------
--------------------------------------------------------------------------------
--------------CAGTAGTTTCTCTGTTGTGTTGAATCAGTCTTTCACTGCTCTCACCTAGCAGTGACTCTTATAGGA
CATTTCATG---TAACTCTTATAATTACATTTTGGGTTAAGGGCCATGTACTCGTGTCTGTCTTGCTCGGTTATTACAGT
AACACAGTACTCCGATTGTGTAATAACGGTCCGTTCAGGCTCAAGTTTGTAGCTCTCAAAAATCATTTCCATTAGTTTAA
TCTTGTTCGGTTACTTCTTGTGGAAGAGAGACTCACAT---CAAAGTCCTAGGTTAACCGGGCTGTGTCGTCCGAATTTA
GCTGCTAAACTCAGCTTAGGCAGAAAAATCTTTGCCCCATGTCGGATAATCCCTCGGGTTTATTTTCTCAAGTTGTGTTC
GTTTATA-AAGTATAAAATATGTGCAGTTTCCTCCCTTTTTTTCTGCT----------------GTATATCCTGGATGAA
TAAGATTGGCATAATCATCTGCAGATGTAACTTACAAAATTCAAGTAAAA------------------------------
-----------------------TATTTCATTGAGGACATTATACTTCATGTGTACTGCAAGATGAATAGTGACACTGGG
CCAACACAATGTTGATTTTTCAGCTTTAGGTAGTCCTGATTTTG---TCTTGTGATATAATTGAATGACATATTGGTCGG
ATAATTTGCAAATGGGGTTTGTCACTATGAATAAAATCCC------------------TGTCCATTTATAATAATAG---
--AAAAAATAACA---CTTCCTCTGTTCCAAAATACTTGTCGTGGTTTTAGTTCAAACCACAAAGTAGTATTTTGGAACG
GAGGGAGTACATCCCAACCTTTGCATTTTTTAAATAAAGACCAACCTTTGCATAAATGATACTTATACAATGCTGTGTTG
AAACTCCCAGGTGCGCCGAGTTCAGAATCTTGTGGAGACCCTGGACAAGCTGAAGGCAAGGAACGCAAACCCTTTCAGTG
ATAGCGCCAAATCTGTTTCGGTGTCGACCGAGTGGGAGACGTTCGAAAATGGCATGGGCAGCTTGACTGCTCCGCCGGCC
CGATTTTCTTCCACACAAAACGACACTGACTGGGAGCAGTTCGACTAGCATGAGAATGTGCATTCTCGATGTATTATTAT
GTAACTTGCGACGAAAGCTACTGTGTACATGTATGAAGTATGATGCCTCTTGCCACTCCACTGCCTGTGAGATTGTTGCC
AGATGATGCTGGTGAATTGCTCTGCAAAATCGTTATGCTTTCAAGTTTCACAATGTTCTTGCCATGGGGCGTGCTAGCTA
GTAAACTGGTTCTGCTAACG------------------------CCA---------------------------TGATTG
CTGAACCGAAGGCATTCCATGCTTGAGATGTAT-------------AACTGCATTTAATCTAGAAAGAAGGGCAAAAACT
G-AATTGGCAGAGCGAAGAGCAGAGCCCCTGTAAAAACTAAAAACTCCGTTGCATATTGTAGGAAATTACAAATATCCCT
TCTGAAATTGGCAAAAGATTGAACTACGAATATCCCTTCTGTGTTGCCTAGTCACCAGCTTCTACAGTTCTACTACAACT
GCCCTTGAAGAAAGAAGAGTGAATTCCGGTTTTTACCCCCTATTTTGACTTTTTTGACACTAATTACCCCATTTAGCGGG
ATTTCATCCGTTTTACCCCATTTAGCACAAGTGTTGCCACAATTTACCCTCTTTTAAATTTTGCGTGCGTTCTGACCTAC
GGGTCACAATTTGTCAGGTCTAGCTGGCATGCCACGTCAACGGGTTTTTTCTGTCTATTTTTCTCCCTACTAAACTCATT
TCCGGTTTGAAGTATTCTGATGGGACGATTGTACTTGATCAGCATGTCATATTACCATTGAATAAATTATAGGAGAAATT
GTTACCAATATAATCTAAAATCATGTATGTTTTTCTTCAGTTATCATATATGGCCTTAAGTATGGATGGTTCTGTAGATT
AGATTAAAGTGGTGTAAATATACTATTTTACTAACTCTGATGCACCTACATATCTAAATATCTAGGTAGCAAATATGTTG
ACTGAAGAGTGTGTGTTGTTACTTGCTAGCTGTAAAGGAAGTTTGGATCTTTGTATCTTATGATGCATGCTGAAACGTGT
TCGTTCACCGTATTAGAGTATATTATGATTGCAGCCACTAATTCATTTTTCTTTTTCTTGCACAAAGCGGATGGCAACGG
AGATGTAGAGTGTTAGGCATATTTTACATGTCTGTAGATAAAAGAATTCAGAGCCAGAGATGATTGAGAGGTATTTCATT
ATTTATTTTGATATAAAGGAGAAGATGAAGAAATTGGGTTCCAACCCTTGGGACAGCGTTAATTATCAGAAGAAGAGGGC
CAACGGGAACTCCATGATTGAGTTAACAGATAATGCAGGCATGGTGAACATGCTAGAGGAACTTGATGCTTATAAGAAAA
TCAGTTTGAATGTTAATTGGGGGAGAGCAACATAAACGAGAAGCCATGGGAGGCGAGCGTGGCGCGCGACCGACTTGGAC
GTTGGACGTGCCGCGAGCGACCTCCATCGGCTGAGCCGGTCAGAAGAAGCGGCGCTGCCCAGTTCAGCAGTGAGAAAAAT
AGCCAGGAAAAACCATTGACGTGGCATGCCAGCTGGACCCAACAATTGTGACCCACCAGTCAGAATGCTCAAAAAAATTA
AACAGGGTAAACTGTGGCAACATTTTTGCTAAATGGGGTAAAATGGATGAAATCTTGCTAAATGGGATAATTAGTGTCAA
AAATGTCAAAATAGGGGGTAAAAACCCGAATTCACTCAAGAAAGAACAACGGGCACCAGCTT---------CTACTACAA
CTGAACGGTGATGCCTCTAGCTCCCATGGCTGCCAGACGCTGGTCGACCGACTGGTCGCCGACCTCGGTGGCCCTCGCTG
CCGCGCGGCGGGACACGTCGAACCGCTCGCCGTCTCCCCACAGCGCGTAGGCCTCCTCGCCGTGCGCCGCGTCGTCGCCG
ATCCTGAGCTGCTCGTCGGGCATCCGCAGCGGGATGACGAGGCCCACGGCGAGGATGATGCCGGTGGTGACCACGACGTT
CCACACGACAACGAAGAGCGCCGCGGCCAGCTGCTTGCCCACCTGCTGGACGCCGCCGCCGTAGAAGGCGCCGCGCGTGC
CGGGGACGTGGGTGTGCAGGGTGGTGAGCTCCGGGGTGGCGAGGAGCCCCGTGAGGACGCCGCCGAGGAGCCCGGCGACG
GCGTGGGTGTGGAACACGGCGAGGGTGTCGTCCACCTTCTGGAGGAGGGCGGACCGCTTGTGGAGGACCATCATGGTG
>SNPs
----S-------------------------------------S-----S-----S--------------S-----S----
-----------------------------------------S----------------S--S------------------
--------------------S-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------SS----S------------------S--SSS-SS-------------------------
-----------------------------------------------------------S--------------------
-------S---S------SS----S---S---------------------S----S-------S----------------
S-S----------------------S------S----------------SS----S--S--SS-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------S----------------------S-----------------
----------------S---------------------------------------------------------------
-----S--------------------------------------------------------------S-----------
--------------------------------------------------------------------------------
-------------------S---------------------------------------SS-------------------
----------S-----SSS----SS-------------------------------------------------------
-----------------------------------------SSS-SSS--------------------------------
---------------------------------------------------S---S------------------------
-------------------------S-----------------------------------------------S------
-----------------------------------------------------S--------------------------
-----------------------------------------------------------------S--------------
-----S---S-S------------S-------------------------------------------------------
----------------------------------------S------------------------------S--------
-------------------------------------------------------------------------------S
---S---------S----S-S-------------S----------------------------------S----------
-SS----S--------------------S--S-S----S------S---S------------S-----------------
SS--SS-SS--SS------------------------------------------S------------------------
-------SS-S-SSSSSSSS----------S-S------------------S--S--------SS------------SS-
-SS------S------S------SS-----------------------------------------------S------S
---------------S----S---------------------------------S--------------SSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------
---------S------------S----S----------------------------------------------------
------------S----S----------S--S------------------------------------------------
-----------------------------------------S--------S-----------------S--------S--
-------------------------------------------------------S------------------------
--------------------------------------------------------------------------------
--------------S--S--------------------------------------------------------------
S-------S-------------------------S-----------------S---------------------------
--------------------------------------------------------------------------------
----------------------------------------------------S---------------------------
-------------------S----------------------------------------------S-------------
----------------------------------------------S-------------S--S------------SS--
---------S---------S------------------------------------------------------------
----------------------------------------------------------------------------S---
-------S-------S----------------------------------------------------------------
-----------------------S-----------------------------------------------S--------
---------------------S----S-----------------------------------------------------
--S---S-------S----------------S---------------------S--------------------------
------S------------------------------------------------S--------------S---------
--------------------------------------------S---------S-------------------------
-------S----------------------------------------S-------------S-----------------
--------------------S------------S----------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSS---------------------------------------------------------
-----------------------------S-----SSS--SSS---------------------SS------------S-
------------------------S------------------------------------------S------------
------S------SSS------S-------------S--S----------------------------------------
-----------------------------------------S----------------------------------S---
--------------------------------------------------------------------------S-----
-------------------------S------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------S-----------------------------------------------------
-----------------------------------------------SSS-----S-----S--S--S-S------S---
-------S---SSSSSSSSSS-S-SSS-SS-S-SS-SSS-SSS--SSSSSSSSSSSSSSSSSSSSSSSSSSSSS------
-S--S-----S-SS----------S-------SS-SSS--SSSSSS-----S----------S----------S---S--
SS--------------------S---S-S------SS-----SSSSSS--SSSS-SS-S-SSS--SS-------------
----------------------S--------------------SSSSS--SSS-SSSS-SSSSSSSS-SS-S--------
--------S-----------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------S-S----S--SSS-SSSSSSSSSS---------
---------------------------------------------------------S----------------------
----S-----------S---------------------------------------------------------------
------------------------------------------------------------------------S-------
---------------------S--------------------------------------S-------------------
-S------------------------------------------------------------------------------
------------------------------------------------S-----------------------------
>forward_70
--------------------------------------------------TGTTGCACGGACATGAATGC----------
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>reverse_2613
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----------------------------------------------------TATCATGGGACGGAGGGAGG--------
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>forward_1826
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----------------------------------------------GGTACGTCGCCTCTTCTTCC--------------
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>reverse_3867
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--------------------------TCATTGTGGGTTAAGGGCCA----------------------------------
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>forward_2632
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----------------------------------------------------TATCATGGGACGGAGGGAGG--------
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>reverse_4336
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---------------AATGACACTGGGCCAACACA---------------------------------------------
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>forward_3504
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--------------------------------------------ACACATTAGCCAGGACGTGA----------------
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>reverse_5430
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---------------------------------------------------------------------ATCTGGCGAAA
GAACGAGGG-----------------------------------------------------------------------
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------------------------------------------------------------------------------
