>input_sequence_24089
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-------------ATGGCGTCGCCAAACAGCAGGCAGCAGCAGCAGCAGCACTGGCCGAGCATGTTCCGCTCCAAGCACG
GCAGCCAGGTGTGGCAGTCGCAGCCGGACATGACCGGCTCGCCCCCCTCCCTCGTCTCCGGCTCCGCCGCCGCCGCCGGC
CACTCCTTCAAGTCCCCCTTCTCCTCAGGTATGCATGCATGCTACTGTTTGCTGCGCATGATCACTTGCATGCACTAGAT
AGATATAGGGTTCTTTCTTGTAGCCTGCTGTTGATCGAGGATCGATCGATCGTGATCGAGACGGGACACGGGAGTCAAAT
TGATTAACTGCTGAGTATACATGCAGGTCCTGATCAGGAGAGGAACACCGACACGAAGCCGCGGTGGAACCCCCGGCCGG
AGCAGATCCGGATCCTGGAGACGCTCTTCAACTCCGGCTTGATCAACCCGACGCGCGACGAGATCCCCCGCATCCGCATG
CGCCTGCAGGAGTATGGCCCGGTCGGCGACTCCAACGTCTTCTACTGGTTCCAGAACCGCAAGTCCCGCTCCAAGAACAA
GCTGCGCAACGCGGCCTCGCGCGCCGCTCCCGTCCGGGCCTGCGCCCCGGCACGCCAGCAGGCCGCCGCGCCGTATACGC
CACCTCCCAAGCAGTTCCATCCGCCGAAGCCGCCGCTCTTCTCGCCGGTGGCTCCCACGTCTTCCTCCTCTTCCTCCTCC
GACCGGTCGTCCGGATCCAGCAAACCGGTGAAGCCGGCTGCCACGCAGGCGATGTCCGCGACGGCGGCCATGGACCTGCT
CTCGCCGCTTGCCGCGGCGTGCCACCAGCAAATGCACTACCAGTTCAGCCTGGGCCAGCCCCCGGTGTCTACTCCGGCTC
AGGCTCCGGCTCCTACGCCAACGTTGGACGAGTTCGTCGCCACCGACGTCGAGCCGATCTTCCTGCAGTACCCACAAGGG
CACTGCCTCTCTGCGGGGGAGCTCGCCGCCATCCTGGGCGCACAGTACATGCCAGTGCCTGCCGTGCAGCAGCCACCGGT
GGCATCGCCCGCCGGCATGCTCTTGGGGCTCTGCAACGACGTGGCAATAGGTCCCACCAGCACTGGCCAAAGGAGCAGCG
CCTCGGCCGCCGGGGTTGGTCAATACTGGTCCGGCGGCGTTGATCAGCTCGGCCTCCGCAAGAACAGTGACCCCTTCTTG
AACACCTCCGTTGGCAAAGAAGAGGCGTATGACGACTTCACGAAGACGAAGCTGGGACTGCCACAATACGGCTTAGGCGT
CACTGCAGCGCCGGCTACCTCTGCGGCTGCTGTTTTGCGTCCTCCTGCTTCGCCGGATTCCGGCGCCGTCACCGTTGCAA
GTGCGTCTGCTACTGCTGAGCTGACCAGTTTATTTGCAACCACTGACGCG---------ATCAGCTACAATAGTAACTTG
CAAGGTATGTGATGAAACGTGCTTAATCTTGGTACACCATTTTGAT-TTTTGTTCATTCACGCCCTCTCACTATATTATC
ATATGCATGCGTATGTAAGTGTTCGTGTCTTCACGGGCTAGAGGCCAGAGGGGGGAGTTTCTCTTATAATTAATATTCTG
CCTCCATTTCAGTTCCTTTTGGATGTTAGTTTGCCCATTCCCATTGTTTAGG--TATACCCATACACGCACGTCCAATCT
TTTTTGTATGCTTCCTTGCATGAGGCAGTGCAAATTGCCTTTAGGGCCCCAATTATAAATCCCAGCGTAAGGGCATATCG
TATGGTTTGACGATTGGGCATGTAAATGAGACAAGGTTGAACCATGTAAACTCTCTAGTGCATGCACAATCCTGTCACTC
CAAGCTGTACATCATGCATGCATGACTTTTCGCTAAATAAAAATGGGTGGAATTTGTCAGCTTGTAATAGTCACAGCTTT
AGGAAAGACCATAACTCGTGAGCTGTACTCCATGAGCAAAAAAAAAAAA-------------------------------
------------------------ATTTGTGATGGGATGTTACAAATATATGAACTCTTTCATGGTGACAAAAACATCAT
AGCATGACCTGTAGGTTCATTAATGCTAGTTGCAAGTAAGCATGCACCCATATGCGTCCATTGCATGCATGGAGCTATTT
CACATGTTCATGAAAAGACTAGACTTGAAGGAATGGAAGCATACGGTTCCATATAAGATTCCAAAATGAGACTTTAGAAG
CAAATATATGAACACATTGCTTAGTT-TCG-AACATGTGAGGAGCAGATTGGTCTTGTCATGCACACATGT--GGCAGCA
GTAATTCAAGTGGAAAAAAAATACTCCCGTAGTACGTGTGAAAGGAGTATAATTTGATCCGAAGCTGACAGATTAGTGGT
TAAAATC---------------------AACCAAAAGGGGGGAAGCCTTTTGTGGGTGAAACTGAAGGACAGTAACACTA
GATCCTAGTACTATCGTGGTCGCAAGCCACACAACTCATAATAAATGTACATCATTCGTATGGTCTTGTCACGGCAACTT
GTCTATCATCAAGAGAAAAAGGAGGAAGCAGCGGATGCGTGTGAAGAATTTTACCGCGTACGTATAGGAAGGAGGGAGGG
AGCACGGACGCACGCAGAGTGATGGCGGAAAAGACTGAGGAGGTGATGGCGGTCAAATTTCCTCCTGT--CCGCGCGCGC
TTA---AAGTTCCCTTCACATTATACAGGGGGCGTTTTTACCTAGATCGACCGTGTGCATGGCAGTCCAAGACTGTCACA
CGCTTGCTGGGCGCTTGGGTTTCCTCGTAGTCTTCCGTTTCGCAAGTCACGGGCGACAATAACTCCCCTCTGCGCCGCAC
TTAATATCACTCCCGGTTTTCATTCTTTTGACCGTGTTGCGTGCATGCAGGACCAGCGGATGATGTTGGGTTCGCGGGCG
CAGCGGCAGCGGCAGGGGCAGGGGCCACGGGCGTGTTGGGCAGGGGCGCCGCGGTGGTGTGCTTCGCGGGCACCAGCGCC
GCGTGCAGCGTCCCGGCCACGCACCTCGACGTCAAGCTCTACTTCGGGGACGGGGCCGTCCTCTTCCGCTGCAACGGCGA
CCGCGCCGAGCCGCTCCTCGTCGACGACGCCGGCCTCACCGTCGAGCCGCTCCAGCACGGCGGGGTCTACTACTGCGTGC
TCATATAG------------------------------------------------------------------------
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>chr3D_1_TraesCS3D01G244300
TTGGTTCAGAAGTCCTAGGACTTTTTCTAGTCCCAGGACTAATCAAAAAAAGACTCTAGTAGAGTCTTTTTCTAGTCCTT
GTAGAAAAAGTCTCTCCCGTTTGGTTTCTAGAGACTTTTTAGGGACTTTTTCTAATCTCTGGGACTAAAAAGTCCCTGAA
CCAAACACCCCCTCAGTCCAACGCTACTCCTTGAAGGCTTGAACTTAATCAAAACACATGGGATATAGATGGGCATAATC
AATGCTTAGAACGAGTGGCGCACA-TTTTTTCGAAATTACTGCACGCACAAATCTCGAATTCGACGTGCATATAGTAGTA
G--------TAGTGTATACCGTAAGTACGGTTTCATTCGTTTTGTGCAGGCTGCGGATGCGACGATCAGAGGGTTTAACC
TGCGATCCCCA-----GCCTAGGTGACCATCACGCACGCACACCACCATCTGCGCAAGCAAAAGGGCACTAACAGTAACG
GAGGCAGGAACGCAGGAGCCGGGC--AGAGCCATGATGGGTTCTCGGTGTCTTCCTTGCTTGTCATACCTAGGGCAAGCT
CGCGCCCGCTCCAGTACTTGCACTTGCACCCATCGGGCATCAGTGGGCCACAGGTGGGCAACCGTCCATCAGTCCCCTCC
TGATGCAAACCCATCAAGCTAGCTAGCCGCCCTACCGTAGACCGTAGTAGTCCCTTGCATGCATGTATCCCCAAGGA-AA
AAAAAATGGCAGGAGGGGTCGTGCTGCTCCTGCTAGCT----ACTTCAGCACTCCATTTATTGCCACGCCGTGGTTGGCT
TTGGGTTCGGCCATTATAAGAGGCAGCAATACGCAAGAATGCGTATACAGCTTTGCTTTGCTAGGTAG----AAAACCAT
AGGGAG-CCTGAGCAGTGCGTAGCAGCAGCAAGGGGAGAGGCTTAGCTAGGCGTCGTCTCGTCCGTTTCGTCGATCCCTG
CCTCCGC--TCCACCGTAACT----GGCCGTCGTTGTGTTGCGACGGCGAGGAACATCAGATCAT---------------
------CACCACCATGGCGTCGCCAAACAGCAGGCAGCAGCAGCAGCAGCACTGGCCGAGCATGTTCCGCTCCAAGCACG
GCAGCCAGGTGTGGCAGTCGCAGCCGGACATGACCGGCTCGCCCCCCTCCCTCGTCTCCGGCTCCGCCGCCGCCGCCGGC
CACTCCTTCAAGTCCCCCTTCTCCTCAGGTATGCATGCATGCTACTGTTTGCTGCGCATGATCACTTGCATGCACTAGAT
AGATATAGGGTTCTTTCTTGTAGCCTGCTGTTGATCGAGGATCGATCGATCGTGATCGAGACGGGACACGGGAGTCAAAT
TGATTAACTGCTGAGTATACATGCAGGTCCTGATCAGGAGAGGAACACCGACACGAAGCCGCGGTGGAACCCCCGGCCGG
AGCAGATCCGGATCCTGGAGACGCTCTTCAACTCCGGCTTGATCAACCCGACGCGCGACGAGATCCCCCGCATCCGCATG
CGCCTGCAGGAGTATGGCCCGGTCGGCGACTCCAACGTCTTCTACTGGTTCCAGAACCGCAAGTCCCGCTCCAAGAACAA
GCTGCGCAACGCGGCCTCGCGCGCCGCTCCCGTCCGGGCCTGCGCCCCGGCACGCCAGCAGGCCGCCGCGCCGTATACGC
CACCTCCCAAGCAGTTCCATCCGCCGAAGCCGCCGCTCTTCTCGCCGGTGGCTCCCACGTCTTCCTCCTCTTCCTCCTCC
GACCGGTCGTCCGGATCCAGCAAACCGGTGAAGCCGGCTGCCACGCAGGCGATGTCCGCGACGGCGGCCATGGACCTGCT
CTCGCCGCTTGCCGCGGCGTGCCACCAGCAAATGCACTACCAGTTCAGCCTGGGCCAGCCCCCGGTGTCTACTCCGGCTC
AGGCTCCGGCTCCTACGCCAACGTTGGACGAGTTCGTCGCCACCGACGTCGAGCCGATCTTCCTGCAGTACCCACAAGGG
CACTGCCTCTCTGCGGGGGAGCTCGCCGCCATCCTGGGCGCACAGTACATGCCAGTGCCTGCCGTGCAGCAGCCACCGGT
GGCATCGCCCGCCGGCATGCTCTTGGGGCTCTGCAACGACGTGGCAATAGGTCCCACCAGCACTGGCCAAAGGAGCAGCG
CCTCGGCCGCCGGGGTTGGTCAATACTGGTCCGGCGGCGTTGATCAGCTCGGCCTCCGCAAGAACAGTGACCCCTTCTTG
AACACCTCCGTTGGCAAAGAAGAGGCGTATGACGACTTCACGAAGACGAAGCTGGGACTGCCACAATACGGCTTAGGCGT
CACTGCAGCGCCGGCTACCTCTGCGGCTGCTGTTTTGCGTCCTCCTGCTTCGCCGGATTCCGGCGCCGTCACCGTTGCAA
GTGCGTCTGCTACTGCTGAGCTGACCAGTTTATTTGCAACCACTGACGCG---------ATCAGCTACAATAGTAACTTG
CAAGGTATGTGATGAAACGTGCTTAATCTTGGTACACCATTTTGAT-TTTTGTTCATTCACGCCCTCTCACTATATTATC
ATATGCATGCGTATGTAAGTGTTCGTGTCTTCACGGGCTAGAGGCCAGAGGGGGGAGTTTCTCTTATAATTAATATTCTG
CCTCCATTTCAGTTCCTTTTGGATGTTAGTTTGCCCATTCCCATTGTTTAGG--TATACCCATACACGCACGTCCAATCT
TTTTTGTATGCTTCCTTGCATGAGGCAGTGCAAATTGCCTTTAGGGCCCCAATTATAAATCCCAGCGTAAGGGCATATCG
TATGGTTTGACGATTGGGCATGTAAATGAGACAAGGTTGAACCATGTAAACTCTCTAGTGCATGCACAATCCTGTCACTC
CAAGCTGTACATCATGCATGCATGACTTTTCGCTAAATAAAAATGGGTGGAATTTGTCAGCTTGTAATAGTCACAGCTTT
AGGAAAGACCATAACTCGTGAGCTGTACTCCATGAGCAAAAAAAAAAAA-------------------------------
------------------------ATTTGTGATGGGATGTTACAAATATATGAACTCTTTCATGGTGACAAAAACATCAT
AGCATGACCTGTAGGTTCATTAATGCTAGTTGCAAGTAAGCATGCACCCATATGCGTCCATTGCATGCATGGAGCTATTT
CACATGTTCATGAAAAGACTAGACTTGAAGGAATGGAAGCATACGGTTCCATATAAGATTCCAAAATGAGACTTTAGAAG
CAAATATATGAACACATTGCTTAGTT-TCG-AACATGTGAGGAGCAGATTGGTCTTGTCATGCACACATGT--GGCAGCA
GTAATTCAAGTGGAAAAAAAATACTCCCGTAGTACGTGTGAAAGGAGTATAATTTGATCCGAAGCTGACAGATTAGTGGT
TAAAATC---------------------AACCAAAAGGGGGGAAGCCTTTTGTGGGTGAAACTGAAGGACAGTAACACTA
GATCCTAGTACTATCGTGGTCGCAAGCCACACAACTCATAATAAATGTACATCATTCGTATGGTCTTGTCACGGCAACTT
GTCTATCATCAAGAGAAAAAGGAGGAAGCAGCGGATGCGTGTGAAGAATTTTACCGCGTACGTATAGGAAGGAGGGAGGG
AGCACGGACGCACGCAGAGTGATGGCGGAAAAGACTGAGGAGGTGATGGCGGTCAAATTTCCTCCTGT--CCGCGCGCGC
TTA---AAGTTCCCTTCACATTATACAGGGGGCGTTTTTACCTAGATCGACCGTGTGCATGGCAGTCCAAGACTGTCACA
CGCTTGCTGGGCGCTTGGGTTTCCTCGTAGTCTTCCGTTTCGCAAGTCACGGGCGACAATAACTCCCCTCTGCGCCGCAC
TTAATATCACTCCCGGTTTTCATTCTTTTGACCGTGTTGCGTGCATGCAGGACCAGCGGATGATGTTGGGTTCGCGGGCG
CAGCGGCAGCGGCAGGGGCAGGGGCCACGGGCGTGTTGGGCAGGGGCGCCGCGGTGGTGTGCTTCGCGGGCACCAGCGCC
GCGTGCAGCGTCCCGGCCACGCACCTCGACGTCAAGCTCTACTTCGGGGACGGGGCCGTCCTCTTCCGCTGCAACGGCGA
CCGCGCCGAGCCGCTCCTCGTCGACGACGCCGGCCTCACCGTCGAGCCGCTCCAGCACGGCGGGGTCTACTACTGCGTGC
TCATATAGCAGCATGAAACCGCGCGTCTCCCCGTCCACCTAATCTAGTGATGCTC----CTCTATATATAATCTAGATTC
AGTAGTTTTCTAGTAGTACTATGTAGCTTATTCTCTCATGACCGTTGTCCGTCCATCGTATTGGAAAAGGGCTACTAGTA
TTCCAAAACTTAAGCTATTATCGCATGCTTGTGAGCAGTGATCCTGTCGTTTATTACCAAATTTCTGATCAA-TTGATTG
AGGTCGATATACTCCATCATCATGAAAATAATAATCATGAGTATTTACTAGCAGTGGAGGTTCGCCTATGCTACTCCTTT
TTTTTCGCAACATGAGCCTCCTACAACTTGTGTTGGTACTGCACGTACGATCAACTCTACTGTTTTGGTTTTAATGTCGC
CAATGAACTTCAAGTTAGGCAGCTA-------------------------------------------------------
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----------------------------------------------------------TAGCAGCCCAGCACACATGTAC
AGGCTGATAGACAACCTTCATGGAGTACAGGAACATGACACAAGAATACTATAGCAAACCAGAACGATGATATACATGCA
TGTACGTATAGTACAAAGTGCTACCAAAAATTGCCAATGGTACTCGGGAACCTCGGTTTCCGAAAAACCATTTTCTACAA
CGATTTTTTTGAATTTCT--TTGTAAACACATATACACATGTATACTATGTATTTGCAAAATTTCAGAACATTCTACTTT
CACAAATGGAGTATAAGAAAAAGACAAATATGTATTTGCAAATGGGCCGCTTTTTTATTGTTGGGCCACC-----AATGG
ACAGCTCACAAATTGCATTTTTTTC-AAAACAAAATTTCATGGATCCATAGCGAACACATACAAGTTTCCACAGAATTTG
TTTCATTTTTTGAAACTTCAAGGTATGATTTTTTTTTC----AAAAAACGGGTACCAAGGTGCCCGAGCACCATAACTTC
GCACTCGAAGTGCTACTCCATACACAGCAACC-----------GTATTAGTGATACCAATAAAACCATACGTCAACTCGA
GGGTCGTGGTTGGGTTTTTATTTGCCCAA
>chr3B_198
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-------------------------------------CTTGAACTTAATCAAAACACATGGAATATAGATGGGCATAATC
AATGCTTAGAACTAGTGGTGCACA-TTTTTTCGAAATCACTGCACGCACAAATCTCAAATTCGACATGCATATAGTAGAG
TAGTACTACTAGTGTATACCGTAAGTACGGTTTCATTCGTTTTGTGCAGGTTGCAGATGCGACGATCAGAGGGTTTAACC
TGCGATCCCCA-----G-----GTGACCATCACGCACGCACACCACGATCTACGCAAGCAAAAGGGCACTAACAGTAACG
GAGGCAGAAACGCAGGAGCCGGGCAGAGAGCCATGATGGGTTCTCGGTGTCTTCCTTGCTTGTCATACCTAGGGCAACCT
CGCGCCCGCTCCAGTACTTGCACTTGCACCCATCGGGCATCAGTGGGCCACAGGTGGGCAACCGTCCATCAGTCCCCTCC
TGATGCAAACCCATCAAGCTAGCTAGCCACCCCACCGTAGACC---GTAGTCCCTTGCATGCATGTATCCCCAAG-A-AA
AAAAAATGGCAGGAGAGGCCGTGCTGCTCATGCTAGCT----ACTTCAGCACTCCATTTATTGCCACGCCGTGGTTGGCT
TC-GGCTCGGCCATTATAAGAGGCAGCAATACGCAAGAATGCGTATACAGCTTTGCTTTGCTAGTGGGTGAAAAACT-AT
AGGGAGACCTGAGCAGTGCGTAGCAGCAGCAAGGGGAGAGGCTTACCTAGGCGTCGTCTCGTCCGTTTCGTCGATCCCTG
CCTCCGC--TCCACCCTAACT----GGCCGTCGTTGTGTTGCGACGGCGAGGAACATCAGATCAT---------------
------CACCACCATGGCGTCGCCAAACAGCAG---GCAGCAGCAGCAGCACTGGCCGAGCATGTTCCGCTCCAAGCACG
GCAGCCAGGTGTGGCAGTCGCAGCCCGACATGACCAGCTCGCCCCCCTCCCTCGTCTCCGGCTCCACCGCCGCCGCCGGC
CACTCCTTCAAGTCCCCCTTCTCCTCAGGTATGCATGCATGCTACTGTTTGCTGCACATGATCACTTGCATGCACTAGAT
AG--ATAGGGTTCTGTCTTGTAGCCTGCCGTTGATCGAGGATCGATCGATCGTCATCGAGACGGGG-------GTCAAAT
TGATTAACTGCTGGGTATACATGCAGGTCCTGATCAGGAGAGAAACACCGACACGAAGCCGCGGTGGAACCCCCGGCCGG
AGCAGATCCGGATCCTGGAGACGCTCTTCAACTCCGGCTTGATCAACCCGACGCGCGACGAGATCCCCCGCATCCGCATG
CGCCTGCAGGAGTATGGCCCGGTCGGCGACTCCAACGTCTTCTACTGGTTCCAGAACCGCAAGTCCCGCTCCAAGAACAA
GCTGCGCAACGCGGCCGCGCGTGTCGCTCCCGTCCGGGCCTGCGCCCCGGCACGCCAGCAGGCCGCCGCGCCGTATACGC
CACCTCCCAAGCAGTTCCATCCGCCGAAGCCGCCGCTCTTCTCGCCGGTGGCTCCCACGTCTTCCTCCTCTTCCTCCTCC
GACCGCTCGTCCGGATCCAGCAAACCGGTGAAGCCGGCTGCCACGCAAGCGATGTCCGCGACGGCGGCCATGGATCTGCT
CTCGCCGCTTGCCGCGGCGTGCCACCAGCAGATGCACTACCAGTTCGGCCTGAGCCAGCACGCCGTGTCTGCTTCGGCTC
CGGCTCCGGCTCCTGCGCCAACGTTGGACGAGTTCGTGGCCACCGACGTCGAGCCGATCTTCCTGCAGTACCCACAAGGG
CACTGCCTGTCTGCGGGGGAGCTCGCCACCATCCTGGGCGCGCAGTACATGCCCGTGCCGGCCGTGCAGCAGCCACCGGT
GGCATCGCCCGCCGGCATGCTCTTGGGGCTCTGCAACGACGTGGCATTAGGTCCCACCAGCACTGGCCACAGGAGCAGCG
CCTCGGCCGCCGGGCTTGGTCAATACTGGTCAAGCGGCGTTGATCAGCTCGGCCTCCGCAAGAACAGCGACCCCTTCTTG
AACACCTCCGTTGCCAAAGAAGAGGCGTATGAGGACTTCACGAAGACGAAGCTTGGACTGGTACAATACGGCTTAGGCGT
CACTGCAGCGCCTGCTACCTCTGCGGCTGCTGTTTTGCCTCCTGCTGCTTCGCCGGATTCCGCCGCCGTCACCGTTGCAA
GTGCGTCTGCTACTGCCGAGCTGACCAGTTTATTTGCAACCACTGCCACCACTGATGCTATCAGCTACAATAGTAACTTG
CAAGGTATGTGATGAAACGTGCTTAATCTTGGTACACCATTTTGAT-TTTTGTTCATTCACGCCCTCTCACTATATTATC
ATATGCATGCGTATGTAAGTGTTCGTGTCTTCACGGACTAGTGGCCAGAGGGGGG-GTTTCTCTTATAATTAATATTCTG
CCTCCATTTCAGTTCCTTTTGGATGTTAGCTTGCCCATTGCCATTGTTTAGGTATATACCCATACACGCACGTCCAATCT
TTTTTGTATGCTTCCTTGCATGAGGCAGTGCAAATTTCCTTTAGGGCCCCAATGATAAATCCCAGCGTAAGGGCATATCG
TAAGGTTTGACGATTGGGCTTGTAAATGAGACAAGGTTGAACCATGTAAACTCTCTAGTGCATGCACAATCTTGTCACTC
CAAGCTGTACATCATGCATGCATGACTTTTCGCTAAATAAAAATGGGTGGAATTTGTCAGCTTGTAATAGTCACAGCTTT
AGGAAAGACCATAACTCGTGAGCTGTACTCCATGAGCGGGGG---------------------------GAGAGAGAGCG
AGCGAGCGAGCGAGAGAGAGAGAGATTTGTGATGGGATGTTACAAATATATGAACTATTTCATGGTGACAAAAACATCGT
AGCATGACCTGTAGATTCATTAATGCTAGTTGCAAGTAAGCATGCACCCATATGCATGCATTGCATGCATGGAGCTATTT
CACATGTTCATGAAAAGACTAGACTTGAAGGAATGGAAGCATGCGGTTCCATATAAGATTCCAAAATGAGACTTTAGAAG
CAAATATATGAACACAGTGCTTAGTTATCG-AAGATGTGAGAAGCAGATTGATCTGGTCATGCGCACATTGTGGGTAGCA
GTAATTCAAGTGGAAAA----TACCCTCGTAATACGTGTGAAAGGAGTAGAATTTGATCTGATGCTGACATATTAGTGGA
TGAAATCAACGTCAGTAATATATATACGAACCAAAAGGGGGGAAGCCCT-------------------------------
-------------TCGTGCTCGCAAGCCACACAACTCATAA---ATGTGCTTCTTTCGTATGGTCATGTCACGGCAACTT
GTCTGTCATCAAGAGAAAAGGGAGGAATAAGCGGATGCGCGTGAAGAATTTTACCGCGTACGTATAGGAAGGAGGGAGGG
AGCACGGACGCACGCACGTACGTTGCTGAAAAGACTGA--AGGTGATGGCGGTCAAATTTCCTCCTGCCCCCGCGCGCGC
TTA---AAGTTCCCTTCACATTATACAGGGGG-GTTTTTACCTAGATCGACCGTGCGCATGGCAGTCCAAGACTGTCACA
CGCTTGCTGGGCGCTTGGATTTCCTCGTAGTCTTCCGTTTCGCAAGTCACGGGCAACAATAACTCCCCTCTGCGCCGCAC
TTAATATCACTCCCGGTTTTCATTCTTTTGACCGTGTTGCGTGCATGCAGGACCAGCGGATGATGTTGGGTTCGCGGGCG
CAGCGGCAGCGGCAGGGGCAGGGGCCACGGGCGTGTTGGGCAGGGGCGCCGCGGTGGTGTGCTTCGCGGGCACCAGCGCC
GCGTGCAGCGTCCCGGCCACGCACCTCGACGTCAAGCTCTACTTCGGGGACGGGGCCGTCCTGTTCCGCTGCAACGGCGA
CCGCGCCGAGCCGCTCGTCGTCGACGACGCCGGCCTCACCGTCGAGCCGCTCCAGCACGGCGGGGTCTACTACTGCGTGC
TCATATAGCAGCATGGAACCGCGCGTCTCCCCGTCGCACTAATCAAGTGATGCTC----CTCTATATATAATCTAGATTC
AGTAGTTTTCTAGTAG---TATGTAGCTTGTTCTCTCATGACCGTTGTCAATCCATCGTATTGGAAAAGGGCTACTAATA
TTCCAAAACTTAAGCTATTATCGCATGCTTGTCAGCAGTGATCGTGTCGTTTATTTCCAAATTTCTGATCAATTTGATTG
AGGTCGATATACTCC-TCATCATGAAAATAATAATCATGAGTATTTACTAGCAGTGGAGGTTCGCCTACGCTACTCCTTT
TTTCCCGCAACATGAGCCTCCCACAACTTGTGTTGGTACTGCACGTACTATCAAGTCTACTGTTTTGGTTTTAAAGTCGC
CAATGAACTTCAAGTTAGGCTGGTCACAGTGGGGAGGAACTTAGGAGTAACATCACACACTCCAATACAATTTTGCTTAT
GTGGCATGTATTTAATGAAGAGAGAGGTGCTTGTGGTAACTAGCTAAGTTACCGGAACATCACACACTCCAAGAAACAAT
GAGTCTATAACCTAATAAATACATCATTGCATGACACTACATAGATGTTCCTACCCACTATGGAGGTAGTAACATAGTCT
AGGGAAGTGTGAAGTTACTAGCTTATGTTCTTGCCCATTGTGACCAGCCTTAGGCAGCTAGCAGCCCAGCACAGATGCAT
AGGCTGGTAGACAACCTTCATGGAGTACAGGAACATGACACAAGAATACTATAGCAAACCAGAACGATGCTATACATGCA
TGTATGTATAGTACAAAGTGCTACCGAAAATTGCCAATGGTACTCGGGAACTTCCGTTTCCGAAAAACCATATTCTACAA
CGATTTCTTTTATTTTCTTTTTGTACACACATATACATATGCATACTATGTATTTGCAAAATTTCATAACATTCTACTTT
CACAAATGGCGTACAACAAAAAGACAAATATGTATTTGCAAATGGGCTACTTTTTTATTGTTGGGCCAGAAAAAAATTGT
ACAGCTCAGAGATTGCATTTTTTTTAAAAACAAAATTTCATGGATCCATAGCAAACACATACAAGTTTCCACATAATTTG
TTTCATTTTTTGAAACTTCAAAGTAT--TTTTTTCTTC----AAAAAAAGGGTACCAAGGTGCCCTAGCACCATAACTTC
GCACTCAAAGTGCTACTCAATACACAACAAACATTTTTTTTT-GTATTAGTGATACTAGTAAAACCTCACGTCAACTCGA
GGGACGTGGTTGGATTTTTATTTGCCCAA
>chr3A_198
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------CTTGAACTTAATCAAAACACATGGAATATTGATGGGCGTAATC
AATGCTTAGAAC-AGTGGTGCACATTTTTTTCGAAATTACTGCACGGACAAATCTCGAATTCGACATGCATATAGTAGAT
TAGTAGTATAC--------------------------CGTTTTGTGCAGGCTGCAGATGCGACGATCAGAGGGTTTAACC
TGCGATCCCCAGCCCAG-----GTGACCATCACGCACGCACACCACCATCTGCGCAAGCAAAAGGGCACTAACAGTAAGG
GAGGCAGGAACGCAGGAGCCGGGC--AGAGCCATGATGGGTTCTCGGTGTCTTCCTTGCTTGTCATACCTAGGGCAAGCT
CGCGCCCGCTACAGTACTTGCACTTGCACCCATCGGGCATCGGTGGGCCACAGGTGGGCAACCGTCCATCAGTCCCCTCC
TGATGCAAACCCATCAAGCTAGCTAGCCGCCCTACCGTAGACC---GTAGTCCCTTGCATGCATGTATCCCCAAG-AGAA
AAAAATTTGCAGGAGGGGTCGTGCTGCTCCTGCTAGCTAGCTACTTCAGCACTCCATTTATTGCCACGCCGTGGTTGGCT
TCGGGTTCGGCCATTATAAGAGGCAGCAATACGCAAGAATGCGTATACAGCTTTGCTTTGCTAGTGGGTGAAAAAACCAT
AGGGAGACCTGAGCAGTGCTTAGC-----------------------TAGGCGTCGTCTCCTCCGTTTCGTCGATCCCTG
CCTCCGCGCTCCACCCTAACTGGCCGGCCGTCGTTGTGTTGCGACGGGGAGGAACATCAGATCGTCGCCAAGGGCAGTAG
TAGTACCACTACCATGGCGTCGCCAAACAGCAG---GCAGCAGCAGCAGCACTGGCCGAGCATGTTCCGCTCCAAGCACG
GCAGCCAGGTGTGGCAGTCGCAGCCCGACATGACCGGCTCGCCCCCCTCCCTCGTCTCCGGCTCCGCCGCCGCCGCCGGC
CACTCCTTCAAGGCCCCCTTCTCCTCAGGTATGCATGCATGCTACTGTTTGCTGCACATGATCACTTGCATGCGCTAGAT
AG--ATAGGGTTCTGTCTTGTAGCCTGCCGTTGATCGAGGATCGATCGATCGTCATCGAGACGGGG-------GTCAAAT
TGATTAACGGTTGACTATATACGCAGGGCCTGATCAGGAGAGGAACACCGACACGAAGCCGCGGTGGAACCCCCGGCCGG
AGCAGATCCGGATCCTGGAGACGCTCTTCAACTCCGGCCTGATCAACCCGACACGCGACGAGATCCCCCGCATCCGCATG
CGCCTGCAGGAGTATGGCCCGGTCGGCGACTCCAACGTCTTCTACTGGTTCCAGAACCGCAAGTCCCGCTCCAAGAACAA
GCTGCGCAACGCGGCCGCGCGCGCCGCTCCCGTCCGGGCCTGCGCCCCGGCACGCCAGCAGGCCGCCGCGCCGTATACGC
CACCTCCCAAGCAGTTCCATCCGCCGAAGCCGCCGCTCTTCTCGCCGGTGGCTCCCACGTCTTCTTCCTCTTCCTCCTCC
GACCGGTCGTCCGGATCCAGCAAACCGGTGAAGCCGGCTGCCACGCAGGACATGTCCGCGACGGCGGCCATGGACCTGCT
CTCGCCGCTTGCCGCGGCGTGCCACCAGCAGATGCACTACCAGTTCGGCCTGGGCCAGACCCCCGTGTCTACTCCGGCTC
AGGCTCCGGCTCCTGCGCCAACGTTGGACGAGTTCGTCGCCACCGACGTCGAGCCGATCTTCCTGCAGTACCCGCAAGGG
CACTGCGTGTCTGCGGGGGAGCTCGCCGCCATCCTGGGCGCGCAGTACATGCCGGTGCCTGCCGTGCAGCAGCCACCGGT
GGCATCGCCCGCCGGCATGTTCTTGGGGCTCTGCAACGACGTGGCAATAGGTCCCACCAGCACTGGCCAAAGGAGCAGCG
CCTCGGCCGCCGGGCTTGGTCAATACTGGTCCATCGGCGTTGATCAGCTCGGCCTCCGCAAGAACAGCGACCCCTTCTTG
AACAACCCCGTTGCCAAAGAAGAGGCGTATGAGGACTTCACGAAGACGAAGCTTGGACTGGTACAATACGGCTTAGGCCT
CACTGCGGCGCCTGCTACCTCTGCGGCCGCTGTTTTGCCTCCTCCTGCTTCGCCGGATTCCACCGCCGTCACCGTTGCAA
GTGCGTCTGCTACTGCCGAGCTGACCAGTTTATTTGCAACCACTGCCACCACCGATGCTATCAGCTACAATAGTAACTTG
CAAGGTATGTGATGAAACGTGCTTAATCTTGGTACACCATTTTGATGTTTTGTTCATTCACGCCCTCTCACTATATTATC
ACATGCATGCGTATGTAAGTGTTCGTGTCTTCACGGACTAGAGGCCACAGGGGGGAGTTTCTCTTATAATTAATATTCTG
CCTCCATTTCAGTTCCTTTTGGATGTTAGCTTGCCCGTTGCCATTGTTTAGGTA--TACCCATACACGCACGTCCAATCT
TTTTTGTATGCTTCCTCGCATGAGGCAGTGCAAATTGCCTTTAGGGCCCCAATTATAAATCCCAGCGTAAGGGCATATCG
TATGGTTTGACGATTGGGCATGTAAATGAGACAAGGTTGAACCATGTAAACTCTCTAGTGCATGCACAATCTTGTCACTC
CAAGCTGTACATCATGCAAGCATGACTTTTCGCTAAACAAAAATGGGTGGAATTTGTCAGCTTGTAATAGTCACAGCTTT
AGGAAAGACCATAACTCGTGAGCTGTACTCCATGAGCAAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG
AGAGAGAGAGAGAGAGAGAGAGAGATTTGTGATGGGATGTTACAAATATATGAACTATTTCATGGTGACAAAAACATCAT
AGCATGACCTGTAGATTCATTAATGCTAGTTGCAAGTAAGCATGCACCCATATGCGTGCATTCCATGCATGGATCTATTT
CACATGTTGATGAAAAGACTAGACTTGAAGGAATGGAAGCAAACGGTTCCATATAAGATTCCAAAATGAGACTTTAGAAG
CAAATATATGAACACATTGCTTAGTTATTGAAAGATGTGGGGAGCAGATTGGTCTTGTCACGCACACATGT--GGTAGTA
GTAATTCAAGTGGAAAAAAAAACTCTTTGTAGTACTTGGGGAAGGAGTATAGTTTGATCCGAAGCTGACAGATTAGAGGT
TAAAAAC---------------------AACCAAAAGGAGGGAACCCTTTTGTGGGTGAAACTGAAGGACAGTAACACTG
GATT------CTATCGTGGTGGCAAGCCACACAACTCATAATAAATGTACATCATTCGTATGGTCTTGTCACGGCAACTT
GTCTAGCATCAAGAGGAAAAGGAGGAAGAAGCGGATGCGTGTGAAGAATTTTACCGGGTACGTATAAGGAGG-------G
GGCACGGACGCACGCACGTACGTTGCTGAAAAGACT---GAGGTGATGGCGGTCAAATTTCCTCCTGC--GCGCGCTTGC
TTGCTTAAGTTCCCTTCACATTATACAGGGGGCGATTTTACCTAGATCGACCGTGCGCATGGCAGTCCAAGACTGTCACA
CGCTTGCTGGGCGCTTGGGTTTCCTCGTAGTCTTCCGTTTCGCAAGTCACGGGCGACAATAACTCCCCTCTGCGCCGCAC
TTAATATCACTCCCGGTTTTCATTCTTTTGACCGTGTTGCGTGCATGCAGGACCAGCGGACGATGTTGGGTTCGCGGGCG
CAGCGGCAGCGGCAGGGGCAGGGGCCACGGGCGTGTTGGGCAGGGGCGCCGCGGTGGTGTGCTTCGCGGGCACCAGCGCC
GCGTGCAGCGTCCCGGCCACGCACCTCGACGTCAAGCTCTACTTCGGGGACGGGGCCGTCCTCTTCCGCTGCAACGGCGA
CCGCGCCGAGCCGCTCCTCGTGGACGACGCCGGCCTCACCGTCGAGCCGCTCCAGCACGGCGGGGTCTACTACTGTGTGC
TCATATAGCAT----GAACCGCGCGCCTCCCCATCGCACTAATCAAGTGATGCTCCTCTCTATATATATGATCTAGATTC
AGTAGTTTTCTAGTAGTACTATGTAGCTTATTCTCTCATGACCGTTGTCCGTCCATCGTATTGGAAAAGGGCTACTAGTA
TTCCAAAACTTAAGCTATTATCGCATGCTTGTGAGCAGTGATCGTGCCGTTTATTACCAAATTTCTGATCAA-TTGATTG
ACGTCGATATACTCCATCATCATGAAAATAATAATCATGAGTATTTACTAGCAGTGGAGGTTCGCCTATGCTACTCCTTC
TTTTTCGCAACATGAGCCTCCCACAACTTGTGTTGGTACTGCATGTACGATCAAATCTACTGTTTTGGTTTTAATGTCGC
CAATGAACTTCAAGTTAGGCAGCTA-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------TAGCAGCCCATCACACATGTAT
AGGCTGATAGACAACCTTCATGGAGTACAGGAACATGACACAAGAATACTATAGCAAACCAGAACGATGCTATACATGCG
TGTACGTATAGTACTAAGTGCTACCGAAATTTGCCAATGATACTCGGGAACCTCCGTTTCCGAAAAACCATTTTCTACAA
CAAATTTTTTGAAAAAAA--TTGTAAACACATATACACATATATACTATGTATTTGCAAAATTTCATAACATTCTACTTT
GACAAATGGCGTACAAGAAAAAGACAAATATGTATT-GCAAATGGGCTGCTTTTT-ATTGTTGGGCCAGAAAAAAATTGT
ACAGCCCAAAGATTGCA-TTTTTCC-AAAACAAAATTTCACGGACCCATAGCGAACACATACAAGTTTCCACATAATTTG
TTTCACTTTTTGAAACTTCAAAGTATGATTTATTTTCTTCAAAAAAAACAGGTACCAAGGTGCCCGAGCACCATAACTTC
GCACTCGAAATGCTAGTCCATACACAACAACCGTTTTTCTTTTGTATTAGTGATACTAGTAAAACCTCACGTCAACTCGA
GGGTTGTGGTTGGGTTTTTATTTG-----
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------------S------------------
------------S-----S----------------------------------------------S------------SS
S-----------------------------------------------------S-------------------------
-----------------SSSSS----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------SSS-----------------------------S----
--------------------------------------------------------------------------------
-S--------------------------------------------------------------SSS-------------
---------------------------------------------S----------------------------------
---------------S----------------------------------------------------------------
---------------------------------SSS--------------------------------------------
-------------------------S------------------------------------------------------
-------------------------------------------------------S------------------------
--SS----------S-------------S------------------------S-----------SSSSSSSS-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------S---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------S---------------S----------------S----------------
--------------S-----------------------------------------------------------------
--------S--------------------------------S-----------S--------------------------
--------------------------------------------------------------------------------
--------------S-----------------S----------------------------------S------------
-------------S------------------S--------------------S------SS------------------
------------S-------------------------S-----------------------S-----------------
----------------S----------------------------S-S-S------------------------------
--------------------------------------------------------------------------------
------------------------------------S-------------------------------------------
-----------------------------S---------S----------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------S--------
--------------------------------------------------------------------------------
-----------------------------------------S-S-S-S--------------------------------
--------------------------------------------------------S-----------------------
--------------S------------------------------------------S----------------------
--------------------------------------------------------------------------------
---------------------------------S-----------------------------------------S----
------------------------S-S-----------------------------------------------------
-------------------------------------------------------------------------------S
---SSSSSSS----------------------------------------------------------------------
----------------------------S---------------------------------------------------
----------------SSSSSS-S--S-----------S----------------------------S------------
-------------------------------------------------------S------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------S-------------------SSS------S-----------------------------------
--------------------------------------------------------------------------------
-------------------------------------------S------------------------------------
--------------------------------------------------------------------------------
---------------------S--------------------------------S-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------S
---------------------------------------------------------------------S----------
-------------------------S----------------------------S-------------------------
------------------------------------------------------------------S-------------
---------S---S---------------------------------S--------------------SS------S--S
--------S-S--------------------------------------------------------------S------
---------------------S----------------------------------------------------------
--------------------------S-----------------------------S-S-------SS------------
-----------------------------
>forward_189
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---------CCCTCAGTCCAACGCTACTC---------------------------------------------------
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>reverse_1871
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------------------------------AATGCACTACCAGTTCAGCCT-----------------------------
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-----------------------------
>forward_190
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----------CCTCAGTCCAACGCTACTCC--------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_2228
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-------------------------------------------------------------------TGACCCCTTCTTG
AACACCTC------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>forward_926
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--------------------------CAGCAAGGGGAGAGGCTTAG----------------------------------
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>reverse_2301
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------------------------------------------------------------CCACAATACGGCTTAGGCGT
--------------------------------------------------------------------------------
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>forward_1256
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------------------------------------GCATGCTACTGTTTGCTGCG------------------------
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>reverse_2302
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-------------------------------------------------------------CACAATACGGCTTAGGCGT
C-------------------------------------------------------------------------------
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>forward_1349
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--------------------------------------------------CGTGATCGAGACGGGACAC-----------
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>reverse_3178
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---------------------------------------------------------CCATTGCATGCATGGAGCTA---
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>forward_2450
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------------------------------TATTTGCAACCACTGACGCG------------------------------
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>reverse_3704
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-----------------------GGCGGAAAAGACTGAGGAGG-------------------------------------
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>forward_3002
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-------------------GAGCTGTACTCCATGAGCAAAAA--------------------------------------
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>reverse_5277
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----------------------------------------------------------------------------ATGG
ACAGCTCACAAATTGCA---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------
