>input_sequence_23790
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-------------------------------------------------GGATCTTCCCTTCCCCGCAACCGAACCCAAA
CCCCGACCAAACCCCTCG---------ACCTCCTCACCTAGGGTTAGGGTTTCAACTCCACCGGCTCTCTCCCGCTCCAA
TTCGAACGAATCCTCCCGCATGGCCGCCGGCATCCTGGTGGACTTCCCCTCCATGGGGTCCGCCTGCTTCTTCCCCAGCC
TCGAGTCCCTCCTCCGCGACTCCACCTCCCGCTTCCTCGCCGCCGTCTCCGCCGCCCCCGACCCGGACCTCACCAACTTC
CGCTCCCTCTTCTCCCGTGTCCTCACCACCTACCCGGACCCTCCCCTCGAGGCCGTCTGGTTCTTCTCCGCGCTCACCTT
CCACGACGCCCCCGACGACCTCCGCTCCATTCTCCACCTCCTCTCCGCCTTCACTGCCTCCTCCCCTGCCGCCGCCAAGC
CCCTTGCGCTCCTCGCCCCCGTCGTCTCCGAACTCTTCCACTCTGCCAAGCCCCGCAGGGAGATTGAGGCGCTCGTCGAG
GCTGTCCTCAGCTACATCAGTATCTGCAGCAGCCGCCCCGCTGGCGGCGAGGTCAACGCCGACGCTGGGAGGCTCTTGCC
AGGTTTCGGGGAGCTGGTCAAGGTGTGGAGCGTGCGCAACTCCAAGGACAGGTGCCCGTTCCAGGTCCTTTTCCCGCTAG
TCGGGGACGAGGCCAGGCGGGAGCTCATGAAGGACGGCTGCAGCGTCACTTTCCTCGCCGGTGTTGTTGTGGCGGAGGCC
TTCCTGCTCAGGCTCTGCCTCAAGGTGCAGGGTGTGGCTGGGGTGCCACGTTCTGAGCTGCAGAAGGAGCTAAGGATCTG
GGCGGTTAGCTCTATCTCGGTCTTCCAGAACCAGCAATTCTTCGGTGAGTTGATGCTGGCCATGCCCTTATTGTTCCTTG
TAGCTTCAGGTTTAGTGACTCCACCGGGATGACCATTTTGCTGATGGATTTTGCAGGAGTCCTGCTGAACATGCTTGTGA
ACCCTCCGCTGCCTGTTTATTCACTACTGGTATGTGTTCCTTTTCAGAGTATATATCACGTCGTTGCAGGGAACATAAAT
ACCTAGG--------------------CTCATCCCTTAAATTAAGGACTACGAGGGCTGATTAGGCGTTGCCA-TATCTG
TTGTATTAGTTAGCTAATTGCCATACATTACCTTTCATGAGATATGAACTGTGCAACTTGTTCCTTTGTAC---------
--------------------------------------------------------------------------------
----------------TTCTATTGTGCTTGGACTCAGGGGTCTTTCTTGTGGAAACTAGAGAGGAGAACAGTACT-----
---AGGACTACTGTATTTCACGTTGTATCCACCAGGAGCCTTACTTGGGATGGAATTTGCATGCCATCTTTGCGATGTTA
ACTGGATGAAGTCTGATCTGTGGTGATCTTTTGCCCTTCTATTTGAACCATCATCACTATATGTATGTGTATGCTGTGTA
GTGTGAACCTTGCTATTCCAGTCTCACAAAATGCTCAATTGCTACCATGTTTGCTTATTT--GACCACAAACTGTTGTGC
AGGCCATGCTAGTCCCTTGCTAATGAATTAAGTTTGCCAGCATTTTCATTTGTTTGCATATTTACTGAATTAAGTATAGA
ACAATACTTGTCTATCTTCGTATAGTGACTCCTTCTTCAATTCCTTGCGTTTACTGTGCCAATATCGTTCATAAGAATGA
ACTAGTTGTTCGCCCCTGATGCAATTTGAATTGTGATGATGGCATTATTA-TTTTTTACGTATTATTGAAGTTGCAATTT
GTTTTTTGGTGCATAACTCAGAGTGCTGATGATGAGATCTTGGTGAGAGATGTCCTTTATGATGCTCTGATCTTGGTGGA
TTATTCATTCCTCAATGGAGCTGAAGTTGATCAAGCTGATAGTTCTCTTTTGCCTATTTTTGTGTCAAGATTGGTTATAA
CTCTTGATGCCATCAATGATGCCAGGTGATAAATAGTTGTTAACTAAACTTGTCTGGTTGAAAGAAAATTTCTTCTAATT
TCTTTATTCATGATAATAGGGCCAAAGGAGATCAAGGGAGAGCAATGTCGTTTATCAACGCCTTCTCAACTTCAAATATT
CCCGTTTACCTGGCTAGGTGGGCTGCTCGTCAAGCTGGCA---------------CTGACCAACTCGGCAAACCAATTGC
TATCACACCTCAAGCTTTTCTGAGTATGTACATATTTGACATGATCCTGTCGATTTTAAGTAACAATAGGTGCTTGTTAT
TGTGTTGTATAGAGTA---GCTGAAGTTGTACATGGTTTCTTTTCACAGAGTGGCTTGTAGATCTCGAAGACAAGGGGCT
CACAGTGTTTGGAGAGAACTGTTCAAGGATCAGGGAGAGGCTGATGCATGATGATGCCAAGAATGACTATCACTATCAGA
GCAGGATGGGTCACTCAGACGCCGACCTTTTCTTCATTGACAAGCAGAGTCACCAGGAGGGTATGCACACAGAAGGTGGG
GAGGATGAAGAAGCCGTGGAGATGGAGACAGCTGATAATGCTTTCATGGCTGCCGCTCAGTCCATGAAGGTGACGGCGAA
TGGCATAAGGAAAAGGAAGGAATGTGGAAGTGAAGACGCAGCAGTTGTGAAGTTTGTGAAGTACAAGGCTGAAGACAGCT
CGGTTAAGGATTACTTCTTGTCTGCTGCTACCAATGGCATGAGCAGTGGCAGCGAGGTGGAGAATCCACAGTCTGATGAC
GAGATGGAAGAAACAGCTTGATATGGGTAGAAGGAAATCACTCACTAATGCTTACTTGAGGAGAATCGTTTTGAAGAGTT
CACTGGACAAGTGCCTTTCTGGAGTCTGCAAGACTGTTGTTGTTTTGGTTTC--------CGCCTCTTAATGATGTCATG
AAGTAGTAGTATCTCGTATGGTTCCTGCTCGATGATGATGATGAGTTGAAGCGGGTTCCTGCGGTCCGACTCCAGCAGGC
CTACGGATATAGTAGTAACTGGTAGCTAACCTAACTTGGCGCGTGATGCCATGAGCTATGTCATGTTCCTTGTTATATGC
AATTAGAGACTTTCAACATGTAGATTTGCTTCCAAGACTTCTGTCATAGAAGAGTACCTTTCCTGTTATCCCACGGTACC
ATCTTGAATTAATGAATCT---------------------------TGGCTACCTTTTAGTTCGT-AATTACAATGGATG
GGTATTGTGCCTTGC-----------------------------------------------------------------
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>chr3D_1_TraesCS3D01G217200
TGTATTTGAGTTTCCGCTTAATACAATTATAGCACGAAGAATAAACATTTATCAAGAATAAGAAAATATGGTAATAGCAA
CTTTATTATTGCCTCTAGGGCATATTTCCAACATGTGCTGCCTGCAATGACATAGTTAGATTTATCGCAAGTTTGCATGC
ATTCTAGTCTGCTTAGTTTCATATCAACTTAGATGTTCCTCTATCGTTTATCCCATTGGAGTTAACTATGTAGTGTTACT
TAATTGTTTCTGCAAGTCATTTACCTATGTTGTTAGATTCCTGTTGAGTTTCTGTCTAGCTATTTTTTCACTATGCATCT
TCAAGATAATTTACTCCGTCGAAGAAATCTCCTATTCAACCCCCTCTAGTCGATTTTTGATCCTATAGTTCTGCAATATG
GTCCATGTTGTGAGGCAGTTTT-GTGAGGCCATGTTGCATGGCTATGCTGCGACGATGTATTGCTGGCGACGACGGCGAC
AACGATGCAGGCGAACCTGGCGGTCCTGTTGTTACGAGAGGTGGAGGACAACAGCTTATTGGGGTTGCTGCAATGTGAAG
AGAGGAACGAAGGGAACCACTGCTCTGCTGTTGTGTTGACCAATTTAATTACATATGGTACCAATCAAACAACTGTCAAG
TCAGAAATCAATAGGATGACGCATAATGCTCGTCAAATTTTGACAAGTGTAGATTCTTTTTATTT-----TGAGAAGATT
TTGACGAGTTTAGATATGACGTACTCCTTCCATCTCAAAATACGTGTCTTAAG-TTAGTACAACTTTGTACTAAAGTTAG
TACAAAGTTGAGACTTTTTTAAAGAT--AAAGTTGAAACACTTATTTTGGGACGGAGGGAGTAGTATGTTAGAGTTGCCT
TTTTTAAATGCTAGAGTTGCTTTAAACATCGTTCTGTTATCCAAACACACCCTAGCTGGCCCGGTTGTCAGTGTGATCCC
TTCCCATCCCATCTTTCTTCTTCAAACCCCCCACGGCCCCGAGCATTTTGGATCTTCCCTTCCCCGCAACCGAACCCAAA
CCCCGACCAAACCCCTCG---------ACCTCCTCACCTAGGGTTAGGGTTTCAACTCCACCGGCTCTCTCCCGCTCCAA
TTCGAACGAATCCTCCCGCATGGCCGCCGGCATCCTGGTGGACTTCCCCTCCATGGGGTCCGCCTGCTTCTTCCCCAGCC
TCGAGTCCCTCCTCCGCGACTCCACCTCCCGCTTCCTCGCCGCCGTCTCCGCCGCCCCCGACCCGGACCTCACCAACTTC
CGCTCCCTCTTCTCCCGTGTCCTCACCACCTACCCGGACCCTCCCCTCGAGGCCGTCTGGTTCTTCTCCGCGCTCACCTT
CCACGACGCCCCCGACGACCTCCGCTCCATTCTCCACCTCCTCTCCGCCTTCACTGCCTCCTCCCCTGCCGCCGCCAAGC
CCCTTGCGCTCCTCGCCCCCGTCGTCTCCGAACTCTTCCACTCTGCCAAGCCCCGCAGGGAGATTGAGGCGCTCGTCGAG
GCTGTCCTCAGCTACATCAGTATCTGCAGCAGCCGCCCCGCTGGCGGCGAGGTCAACGCCGACGCTGGGAGGCTCTTGCC
AGGTTTCGGGGAGCTGGTCAAGGTGTGGAGCGTGCGCAACTCCAAGGACAGGTGCCCGTTCCAGGTCCTTTTCCCGCTAG
TCGGGGACGAGGCCAGGCGGGAGCTCATGAAGGACGGCTGCAGCGTCACTTTCCTCGCCGGTGTTGTTGTGGCGGAGGCC
TTCCTGCTCAGGCTCTGCCTCAAGGTGCAGGGTGTGGCTGGGGTGCCACGTTCTGAGCTGCAGAAGGAGCTAAGGATCTG
GGCGGTTAGCTCTATCTCGGTCTTCCAGAACCAGCAATTCTTCGGTGAGTTGATGCTGGCCATGCCCTTATTGTTCCTTG
TAGCTTCAGGTTTAGTGACTCCACCGGGATGACCATTTTGCTGATGGATTTTGCAGGAGTCCTGCTGAACATGCTTGTGA
ACCCTCCGCTGCCTGTTTATTCACTACTGGTATGTGTTCCTTTTCAGAGTATATATCACGTCGTTGCAGGGAACATAAAT
ACCTAGG--------------------CTCATCCCTTAAATTAAGGACTACGAGGGCTGATTAGGCGTTGCCA-TATCTG
TTGTATTAGTTAGCTAATTGCCATACATTACCTTTCATGAGATATGAACTGTGCAACTTGTTCCTTTGTAC---------
--------------------------------------------------------------------------------
----------------TTCTATTGTGCTTGGACTCAGGGGTCTTTCTTGTGGAAACTAGAGAGGAGAACAGTACT-----
---AGGACTACTGTATTTCACGTTGTATCCACCAGGAGCCTTACTTGGGATGGAATTTGCATGCCATCTTTGCGATGTTA
ACTGGATGAAGTCTGATCTGTGGTGATCTTTTGCCCTTCTATTTGAACCATCATCACTATATGTATGTGTATGCTGTGTA
GTGTGAACCTTGCTATTCCAGTCTCACAAAATGCTCAATTGCTACCATGTTTGCTTATTT--GACCACAAACTGTTGTGC
AGGCCATGCTAGTCCCTTGCTAATGAATTAAGTTTGCCAGCATTTTCATTTGTTTGCATATTTACTGAATTAAGTATAGA
ACAATACTTGTCTATCTTCGTATAGTGACTCCTTCTTCAATTCCTTGCGTTTACTGTGCCAATATCGTTCATAAGAATGA
ACTAGTTGTTCGCCCCTGATGCAATTTGAATTGTGATGATGGCATTATTA-TTTTTTACGTATTATTGAAGTTGCAATTT
GTTTTTTGGTGCATAACTCAGAGTGCTGATGATGAGATCTTGGTGAGAGATGTCCTTTATGATGCTCTGATCTTGGTGGA
TTATTCATTCCTCAATGGAGCTGAAGTTGATCAAGCTGATAGTTCTCTTTTGCCTATTTTTGTGTCAAGATTGGTTATAA
CTCTTGATGCCATCAATGATGCCAGGTGATAAATAGTTGTTAACTAAACTTGTCTGGTTGAAAGAAAATTTCTTCTAATT
TCTTTATTCATGATAATAGGGCCAAAGGAGATCAAGGGAGAGCAATGTCGTTTATCAACGCCTTCTCAACTTCAAATATT
CCCGTTTACCTGGCTAGGTGGGCTGCTCGTCAAGCTGGCA---------------CTGACCAACTCGGCAAACCAATTGC
TATCACACCTCAAGCTTTTCTGAGTATGTACATATTTGACATGATCCTGTCGATTTTAAGTAACAATAGGTGCTTGTTAT
TGTGTTGTATAGAGTA---GCTGAAGTTGTACATGGTTTCTTTTCACAGAGTGGCTTGTAGATCTCGAAGACAAGGGGCT
CACAGTGTTTGGAGAGAACTGTTCAAGGATCAGGGAGAGGCTGATGCATGATGATGCCAAGAATGACTATCACTATCAGA
GCAGGATGGGTCACTCAGACGCCGACCTTTTCTTCATTGACAAGCAGAGTCACCAGGAGGGTATGCACACAGAAGGTGGG
GAGGATGAAGAAGCCGTGGAGATGGAGACAGCTGATAATGCTTTCATGGCTGCCGCTCAGTCCATGAAGGTGACGGCGAA
TGGCATAAGGAAAAGGAAGGAATGTGGAAGTGAAGACGCAGCAGTTGTGAAGTTTGTGAAGTACAAGGCTGAAGACAGCT
CGGTTAAGGATTACTTCTTGTCTGCTGCTACCAATGGCATGAGCAGTGGCAGCGAGGTGGAGAATCCACAGTCTGATGAC
GAGATGGAAGAAACAGCTTGATATGGGTAGAAGGAAATCACTCACTAATGCTTACTTGAGGAGAATCGTTTTGAAGAGTT
CACTGGACAAGTGCCTTTCTGGAGTCTGCAAGACTGTTGTTGTTTTGGTTTC--------CGCCTCTTAATGATGTCATG
AAGTAGTAGTATCTCGTATGGTTCCTGCTCGATGATGATGATGAGTTGAAGCGGGTTCCTGCGGTCCGACTCCAGCAGGC
CTACGGATATAGTAGTAACTGGTAGCTAACCTAACTTGGCGCGTGATGCCATGAGCTATGTCATGTTCCTTGTTATATGC
AATTAGAGACTTTCAACATGTAGATTTGCTTCCAAGACTTCTGTCATAGAAGAGTACCTTTCCTGTTATCCCACGGTACC
ATCTTGAATTAATGAATCT---------------------------TGGCTACCTTTTAGTTCGT-AATTACAATGGATG
GGTATTGTGCCTTGCATTTTTTTTGTCCTACCAGAGCTTGCAAAAATCCAAGAGTACTT---------------------
----------------------------------------------------------TTATTTGTATATCTA-CTACTG
GGTGTTATTTCTGGTCTCCTGTTGGTTCAACA-------TAGGCACTTTCCTTTTCTCTCTGAAAACAAAACAAAACTTT
TCCCGTAGGTGGC--TGTCGCGATCTAGTATCTTAATGTGAGATCTAGTTTTAAAGGTCATGTCACGAGGAACACAGTGG
GTGAAAGTGGACTTTGATTTGGCC-----GATTTGTTTAAAAGTAATGCATTTTGAAATATCAAAAA-------------
-----------------------------------------------------TAGCTTTGCATGGTGCTGATGCCGTCT
A-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------TTTTGTTTGTAGTGAGTATTCGTTGATTTGATGCTATGTTTACCCTTGGGTGAAGATGC
CTGTATAT--GTTTCATGTGCCGTAGTGCGTCATTGAAAGG-AAAGCCCATGAGCGCCCTGTAGCATTTGAGAATTTTAT
TTGTATAGACAAATATTAA-AAACCAGACGTCAG-TTTTTAGCATTTGCCAGCGAACGTCCAGATTTGTCATGAAAAACA
GATAAATTTGCCATGTTGTGTAAGATTTTGTCATGTTCTAGAGTGAAAATTGTCATGTAGTGTAAAAACTTGTCGTGCTG
CAGCGAGTAATTGCTATGCGTACGATCGAGATCCGGCGTACCTCAGATTTTTTTACGCGTGAAATGTATATTGGGGTTAA
AAGAAAAAACATATAGGCTGTTTCCTTTCTCTCTAAAAAAACAAAACAAAACAAAACATAGGCAATTTCTTTGCC-----
--------TGTAGGCGTCTTCGTGGTCACTGCCCACTCTACTCTTCCTTCTCGCAGGCCAAATTCATGTCTTCCCTCGCT
CTTTTCCACGGCCCATTCTCCTACCACCGCGCTCCTCCCTCGTCACCGACCGGCACCTCTCCACGGCCGACGCGACTCGC
GGCGCATTCTTCTCCTTCCCACCCCAATTCGCGCCCCCTCCCTGACGCGCAAGCCGATGAGCTCCGCTCCCACGCAGCGG
CGCTGCAGGACTG
>chr3B_1
TGTATTTGAGTTTCTGGTTAATACAATTATAGCATGGAGAATAAACATTTATCAAGAATAAGGAAATATGATAGTAACAA
CTTTACTATTACCTCTAGGGCATATTTTCAACATGTGCTGCCTGCAATGACAGAGTTAGATTTATCACAAGTTTGCATGC
ATTCTAGTCTGCTTAGTTTCATATCCACTTAGATGTTCCTCTATCGTTTATCCCATTTGAGTTAACTCTGTAGTGTTACC
TAGTTGTTTTTGTAAGTCATTTACCTATGTTGTTAGATTCCTGTTGAGTTTCTGTCTAGCTATTTTTTCACTGTGCATCT
TCAAGATAATTTATTCCGTGGAAG--ATCTCCTATTCAACCCCCTCTAGTCGATTTTTGACCCTATAGTTCTGCAATATC
GTCCATGTTGTGAGGCAATTTTCGTGAGGCCATGTTGCATGGCTATGCTGCGACGATGTATTGCTGGCGACGACGGCGGC
AACAATGCAGGCAAACCTGGCGGTCCTGTTGTTACGAGAGGTGGAGGACGACTGCTTGTTGGGGTCGTTGCGATGTGAAG
AAAGGAACGAAGGGAACCACTGTTCTGCTGTTGTGTTGACCAATTTAACAACATATGGAACCAATCAAACAACTG-CAAG
TCAGAAATCAATAGGATGACACATAATGCTCATCAAATTTTGACAAATGTAGTTTT------TTT-----TGACAAGATT
TTGATAAGTTTAGATATGACGTACTTCCTCCGTTTCAAAATAAGTGTCTTAATCTTAATACTC-----------------
--------------------------------------------------------------------------------
--------------------------CATCGTTCTGTGATCCAAACACGCCCTAACTGGCCCGGTTGTCAGTGTGATCCC
TTCTCATCTCATCTTTCTTCTTCAAACCCCCCACGGCCCCGAGCATTTTGGATCTTCACTTGCCCGCAACCGAACCCAAA
CCCCGACCAAACCCCTCGACCTCACTCACCTCCTCACCTAGGGTTAGGGTTTCAACTCCACCGGCTCTCTCCCGCTCCAA
TTCGAACGAATCCTCCCGCATGGCCGCCGGCATCCTGGTGGACTTCCCCTCCATGGGGTCCGCCAGCTTCTTCCCCAGCC
TCGAGTCCCTCCTCCGCGACTCCACGTCCCGCTTCCTCGCCGCCGTCTCCGCCGCCCCCGACCCGGACCTCACCAACTTC
CGCTCCCTCTTCTCCCGTGTCCTCACCACCTACCCGGACCCTCCCCTCGAGGCCGTCTGGTTCTTCTCCGCGCTCACCTT
CCACGACGCCCCCGACGACCTCCGCTCCATTCTCCACCTCCTCTCCGCCTTCACTGCCTCCTCCCCTGCCGCCGCCAAGC
CCCTTGCGCTCCTCGCCCCCGTCGTCTCCGAACTCTTCCACTCCGCCAAGCCCCGCAGGGAGATTGAGGCGCTCGTCGAG
GCTGTCCTCAGCTACATCAGTATCTGCAGCAGCCGCCCCGCTGGCGGCGAGGTCAACGCCGACGCTGGGAGGCTCTTGCC
AGGTTTCGGGGAGCTGGTCAAGGTGTGGAGCGTGCGCAACTCGAGGGACAGGTGCCCGTTCCAGGTCCTTTTCCCGCTAG
TCGGGGAAGAGGCCAGGCGGGAGCTCATGAAGGACGGCTGCACTGTCACTTTCCTCGCCGGTGTGGTGGTGGCGGAGGCC
TTCCTGCTCAGGCTCTGCCTCAAGGTGCAGGGTGTGGCTGGGGTGCCACGTTCTGAGCTGCAGAAGGAGCTAAGGATCTG
GGCGGTTAGCTCTATCTCGGTCTTCCAGAACCAGCAATTCTTCGGTGAGTTGATGCTGGCCATGCCCTTATTGTTCCTTG
CAGCTTCAGGTTTAGTGACTCCACCGGGATGACCATTTTGCTGATGGATTTTGCAGGAGTCCTGCTGAACATGCTTGTAA
ACCCTCCGCTGCCTGTTTATTCACTACTGGTATGTGTTCCTTTTCAGAGTATATATCACGTCGTTGCAGGGAACATAAAT
ACCTAGGAATAGCCATGAGCAAATAGGCTCATCCCTTGAATTAAAGAATACGAGGGCTGCTTAGGCGTTGTCATTATCTG
TTGTATTAGTTAGCTAATTGCCATACATTATCTTTCATGAGATATGAACTGTGCAACTTGTTCCTTTGTAC---------
--------------------------------------------------------------------------------
----------------TTCTATTGTGCTTGGACTCAGGGGTCTTTCTTGTGGAAACTTGTGAGGAGAACAGTACT-----
---AGGACTACTGTATTTCACGTTGTATCCACCAGGAGCCTTACTTGGGATGGAATTTGCATACCATCTTTGCGATGTAA
ACTGGATGAAGTCTGATCTGTGGTGATCTTTTGCCCTTCTATTTGAACCATCATCACTATATGTATGTGTATGCTGTGTA
GTGTGAACCTTGCTATTCCAGTCTCACAAAATGCTCAATTGCTACCATGTTTACTTATTTTAGACCACAGACTGTTGTGC
AGGCCATGCCAGTCCCTTGCTAATGAATTAAGTTCGCCAGCATTTTCATTTGTTTGCAGATCCACTGAATTAAGTATAGA
ACAATACTTGTCTATCTTCGTATAGTGCCTCCTTCCTCAATTCCTTGCGTTTACTGTGCCAATATCGTTCATAAGAATGA
ACTAGTTGTTCGCCCCTGATGCAATTTGAGTTGTGATGATGGCATTATTATTTTTTTACGTATTATTGAAGTTGCAATTT
GTTTTTTGGTGCATAACTCAGAGTGCTGATGATGAGATCTTGGTGAGAGATGTCCTTTATGATGCTTTGATCTTGGTGGA
TTATTCATTCCTCAATGGAGCTGAAGTTGATCAAGCTGATAGTTCCCTTTTGCCTATTTTTGTGTCAAGATTGGTTATAA
CTCTTGATGCCATCAATGATGCCAGGTGATAAATAGTTGTTAACTAAACTTGTCTGGTTGAAAGAAAATTTCTTCTAATT
TCTTTATTCCTGATAATAGGGCCAAAGGAGATCAAGGGAGAGCAATGTCGTTTATCAACGCCTTCTCAACTTCAAATATT
CCCGTTTACCTGGCTAGGTGGGCTGCTCGTCAAGCTGGCACCAGAATGGCTGGCACTGACCAACTCGGCAAACCAGTTGC
TATCACACCTCAAGCTTTTCTGAGTATGTACATATTTGACATGATCCTGTCGATTTTAAGTAACAATAGGTGGTTGTTAT
TGTGTTGTATAGAGTCAGTGCTGAAGTTGTACATGGTTTCTTTTCACAGAGTGGCTTGTAGATCTTGAAGACAAGGGGCT
CACAGTGTTTGGAGAGAACTGTTCAAGGATCAGGGAGAGGCTGATGCATGATGATGCCAAGAATGACTATCACTATCAGA
GCAGGATGGGTCACTCAGACGCTGGCCTTTTCTTCATTGACAAGCAGAGTCACCAGGAGGGTATGCACACAGAAGGTGGG
GAGGATGAAGAAGCCGTGGAGATGGAGACAGCTGATAATGCTTTCATGGCTGCCGCTCAGTCCATGAAGGTGACGGCGAA
CGGCATAAGGAAAAGGAAGGATTGTGGAAATGAAGACGCAGCAGTTGTGAAGTTTGTGAAGTACAAGGCTGAAGATAGCT
CGGTTAAGGATTACTTCTCGTCTGCTGCTACCAATGGCATGAGCAGTGGTAGCGAGGTGGAGAATCCACAGTCTGATGAT
GAGATGGAAGAAACAGCTTGATATGGGTAGAAGGAAATCACTCACTAATGCTTACTTGAGGAGAGTCGTTTTGAAGAGTT
CACTGGACAAGTGCCTTTCTGGAGTCTGCAAGACTGTTGTTGTTTTGGTTTC--------CGCCTCTTAATGATGTCATG
AAGTAGTAGTATCTCGTATGGTTCCTGCTCGATGATGACGATGAGTTGAAGCGGGTTCCTGCGGTCCGACTCCAGCAGGC
CTACGGATATAGTAGTAACTGGTAGCTAACCTAACTTGGCGCGTGATGCCATGAGCTATATCATGTTCCTTGTTATATGC
AATTAGAGACTTTCAACATGTAGATTTGCTTCCAAGACTTCTGTCATAGAAGAGTACCTTTCCTGTTGTCCCACGGTACC
ATCTTGAATTAATGAATCT---------------------------TGGCTACCTTTTAGTTCGT-AATTACTATGGATG
GATATTGTGCCTTGCG-TTTATTTGTCGTACCAGAGCTAGCAAATATCCAAGAGTACTT---------------------
----------------------------------------------------------TTATTT----------------
-GTGTTATTTCTGGTCTCCTGTTGGTTCAACAATCAACATAGGCAGTTTCCTT--CTCTCTGAAAACAAAACAAAACTTT
GCCTGTAGGTGGC--TGTCGTGATCTACTCTAGATGACTCAACTTTGTACTAGACTCAACTTTGTACTAAATTTGGTACA
AAGTTGAGTCATCTATTTTGGTTAGGGGGGAGTAGTATCTAAGTAATGCATTTTGAAATTTCAAAAA-------------
-----------------------------------------------------TAGCTTTGCATGGTGCTGATGCCGTCT
ACTCCCTCTGTTAAATATTTGTCTTTTTAGAGATTTTGAATGGACTATCACATACGGATTTATATAGATATATTTTAAAG
TGTAGATTCATCCATTTTTGCGCTGTATGTAGTCACTTGTTGAAATTTCTATAAAGACAAATACTCTGTATATAGACATA
TTTTAGGAACGAAGGGAGTATTTTTGTTTGTAGTGAGTGTTCGTTGATTTGATGCTATGTTTACCCTTGGGTGAAGATGC
GTGTATATATGTCTCATGTGCCGTAGTGCGTCATTGAAAGG-AAAGCCCATGAGCGCCTTGTAGCATTTGAGAATTTTAT
TTGTATAGACAAATATTAAAAAATCAGACGTCAGTTTTTTAGCATTTGCCAGCGAACGTCCAGATTTGTCATGAAAAACA
GATAAATTTGCCATGTTGTGTAAGATTTTGTCATGTTCTAGAGTGAAAATTGTCATATAGTGTAGAAACTTGTCGTGCTG
CAGCGAGTAATTGCTATGCGTACGATCGAGAACCGGCGTACCTCAGATTTTTTTACGCGCGAAATGTATATTGGGGTTAA
AAGGAAAAACAAACATA----TTCATTTCTCTCT-AAAAAACAAAACAAAACAAAACATAGGCAATTTCTTTGCCTGTAG
CTGTAGCCTGTAGGCGTCTTCGTGGTCACTGCCCACTACTCTTG-CCTTCTCGCAGGCCAAATTCATGTCTTCCCTCGCT
CTTTTCCACGGCCCATTCTCCTACCACCGGGCTCCTCCCTCGTCGCCGACCGGCACCTCTCCACGGCCGACGCGACTGCC
GGCGCATTCTTCTCCTTCCCACCCCAATTCGCGCCCCCTCCCTGACGCGCAAGCCGATGAGCTCCGGTCCCACGCAGCGG
CGCTGCAGGA---
>chr3A_1
TGTATTTGAGTTTCCGCTTAATACAATTATAGCACAAAGAATAAACATTTATTGG------GGAAATATGATAATAGCAA
CTTTATTATTATCTCCAGGGTATATTTCCAACACGTGCTGCCTGCAATGACATAGTTAGATTTATCGCAAGTTTGCATGC
ATTCTAGTTTGCTTAGTTTCATATCCACTTAGATGTTCCTCTATCGCTTACCCCATTGGAGTTAACTATGTAGTGTTACT
TAATTGTTTCTGTAAGCCATTTACCTATGTTGTTAGATTCCTGTTGAGTTTCTGTCTAGCTATTTTTTCACTGTGCATCT
TCAAGATAATTTATTCCATTGAAGAAATCTTCTATTCAACCCCCTCTAATCGA-TTTTGACCCTATAGTTCTGCAATTTC
GTCCATGTTG----------------------------------------CGACGATGTATTGCTGGCGATGACGGCGAC
AACGATGCAGGCGAACCTGACGGTCCTGTAGTTATGAGAGGTGGAGGACGACTGTTTGTTGGGGTCACTGCGATGTGAAG
AGTGGAACGAAGGGAACCACTGCTCTGCTGTTGTGTTGACCAATTTAACGACATATGTGACCAATCAAACAACTGCCAAG
CCAGAAATCAATAGGATGGCACATAATGCTCATCAAATTTTGACAAGTGTAGATTT------TTTTATTTTGAGAAGATT
TTGATGAGTTTAGATATGACATACTCTCCT-GTCTCAAAATAAATGTCTTAATCTTAGTATAACTTTGTATTAAAGTTAG
TATAAGATTGAGACACTTATTTTGGAACAAAGTTGAGACATTTATTTTTAGACGGATGAAGTAGTATGTTAGAGTTGCTT
TTTTTAGGGAAC--AGTTGCTTTAAACGTCGTCGTGTGATCCAAACACACCCTAACTGGCCCGGTTGTCAGCGTGACCCC
TTCTCATCCCATCTTTCTTCTTCAAACCCCCCACGGCCCCGAGCATTTTGGATCTTCCCTTCCCCGCAACCGAACCCAAA
CCCCGACCAAACCCCTCGACCTCACTCACCTCCTCGCCTAGGGTTAGGGTTTCAACTCCACCGGCTCTCTCCCGCTCCAA
TTCGAACGAATCCTCCCGCATGGCCGCCGGCGTCCTGGTGGACTTCCCCTCCATGGGGTCCGCCTGCTTCTTCCCCAGCC
TCGAGTCCCTCCTCCGCGACTCCACGTCCCGCTTCCTCGCCGCCGTCTCCGCCGCCCCCGACCCGGACCTCACCAACTTC
CGCTCCCTCTTCTCCCGTGTCCTCACCACCTACCCGGACCCTCCCCTCGAGGCCGTCTGGTTCTTCTCCGCGCTCACCTT
CCACGACGCCCCCGACGACCTCCGCTCCATTCTCCACCTCCTCTCCGCCTTCACCGCCTCCTCCCCTGCCGCCGCCAAGC
CCCTTGCGCTCCTCGCCCCCGTCGTCTCCGAACTCTTCCACTCCGCCAAGCCCCGCAGGGAGATTGAGGCGCTCGTCGAG
GCTGTCCTCAGCTACATCAGTATTTGCAGCAGCCGCCCCGCTGGCGGCGAGGTCAACGCCGACGCTGGGAGGCTCTTGCC
AGGTTTCGGGGAGCTGGTCAAGGTGTGGAGCGTGCGCAACTCGAGGGACAGATGCCCGTTCCAGGTCCTTTTCCCGCTAG
TCGGGGACGAGGCCAGGCGGGAGCTCATGAAGGACGGCTGCAGCGTCACTTTCCTCGCCGGTGTGGTGGTGGCGGAGGCC
TTCCTGCTCAGGCTCTGCCTCAAGGTGCAGGGTGTGGCTGGGGTGCCACGTTCTGAGCTGCAGAAGGAGCTAAGGATCTG
GGCGGTTAGCTCTATCTCGGTCTTCCAGAACCAGCAATTCTTCGGTGAGTCGATGCTGGCCATGCCCTTATTGTTCCTTG
TAGCTTCATGTTTAGTGACTCCACCGGGATGACCATTTTGCTGATGGATTTTGCAGGAGTCCTGCTGAACATGCTTGTAA
ACCCTCCGCTGCCTGTTTATTCACTACTGGTATGTGTTCCTTTTCAGAGTATGTATCACGTCGTTGCAGGGAACATAAAT
ACCTAGGAATAGCCATGAGCAAATAGGCTCATCCCTTAAATTAAGGAATACGAGGGCTGCTTAGGCGTTGCCATTATCTG
TTGTATTAGTTAGCTAATTGCCATACATTACCTTTCATGAGATATGAACTGTGCAACTTGTTCCTTTGTACTCCCTCCGT
TTGGAATTACTTGTCGCAGAAATGGATGTATCTAGACATATTTTAGTTCTAGATACATCCATATCCAAGACAAGTAATTC
CGAACGGAGGGAGTACTTCTATTGTGCTTGGACTCAGGGGTCTTTCTTGTGGAAACTAGAGAGGAGAACAGTACTAGGAC
AGTAGGACTACTGTATTTCACGTTGTATCCACCAGGAGCCTTACTTGGGATGGAATTTGCATACCATCTTTGCAATGTGA
ACTGGATGAAGTCTGATCTGTGGTGATCTTTTGCCCTTCTATTTGAACCATCATCACTATATGTATGTGTATGCTGTGTA
GTGTGAACCTTGCTATTCCAGTC--ACAAAATGCTCAATTGCTACCATGTTTACTTATTTTAGACCACAAACTGTTGTGC
AGGCCGTGCTAGTCCCTTGCTAATGAATTAAGTTCGCCAGCATTTTCATTTGTTTGCAGATTTACTGAATTAAGTATAGA
ACAATACTTGTCTGTCTTTGTATAGTGACTCCTTCCTCAATTCTTTCCGTTTACTGTGCCAATATCGTTCATAAGAATGA
ACTAGTTGTTCGCCCCTGATGCAATTTGAGTTATGATGATGTCATTATTA-TTTTTTACGTATTATTGAAGTTGCAATTT
GTTTTTTGGTGCATAACTCAGAGTGCTGATGATGAGATCTTGGTGAGAGATGTCCTTTATGATGCTTTGATCTTGGTGGA
TTATTCATTCCTCAATGGAGCTGAAGTTGATCAAGCTGATAGTTCCCTTTTGCCTATTTTTGTGTCAAGATTGGTTATAA
CTCTTGATGCCATCAATGATGCCAGGTGATAAATAGTTGTTAACTAAACTTGTCTGGTTGAAAGAAAATTTCTTCTAATT
TCTTTATTCATGATAATAGGGCCAAAGGAGATCAAGGGAGAGCAATGTCGTTTATCAACGCCTTCTCAACTTCAAATATT
CCCGTTTACCTGGCTAGGTGGGCTGCTCGTCAAGCTGGCAT---------------TGACCAACTCGGCAAACCAGTTGC
TATCACACCTCAAGCTTTTCTGAGTATGTACATATTTGACATGATCCTGTCGATTTTAAGTAACAATAGGTGCTTGTTAT
TGTGTTGTATAGAGTCGGTGCTGAAGTTGTACATGGTTTCTTTTCACAGAGTGGCTTGTAGATCTCGAAGACAAGGGGCT
CACAGTGTTTGGAGAGAACTGTTCAAGGATCAGGGAGAGGCTGATGCATGATGATGCCAAGAATGACTATCACTATCAGA
GCAGGATGGGTCACTCAGACGCTGACCTTTTCTTCATTGACAAGCAGAGTCACCAGGAGGGTATGCACACAGAAGGTGGG
GAGGATGAAGAAGCCGTGGAGATGGAGACAGCTGATAATGCTTTCATGGCTGCCGCTCAGTCCATGAAGGTGATGGCGAA
TGGCATAAGGAAAAGGAAGGATTGTGGAAATGAAGACGCAGCAGTTGTGAAGTTTGTGAAGTACAAGGCTGAAGACAGCT
CGGTTAAGGATTACTTCTTGTCTGCTGCTACCAATGGCATGAGCAGTGGTAGCGAGGTGGAGAATCCACAGTCTGATGAT
GAGATGGAAGAAACAGCTTGATATGGGTAGAAGGAAATCACTCACTAATGCTTACTTGAGGAGAGTCGTTTTGAAGAGTT
CACTGGACAAGTGCCTTTCTGGAGTCTGCAAGACTGTTGTTCTTTTGGTTTCTGCCTCAGCGCCTCTTAATGATGTCATG
AAGTAGTAGTATCTCGTATGGTTCCTGCTCGATGATGACGATGAGTTGAAGCGGGTTCCTGCGGTCCGACTCCAGCAGGC
CTACGGATATAGTAGTAACTGGTAGCTAACCTAACTTGGCGCGTAATGCCATGAGCTATATCATGTTCCTTGTTATATGC
AATTAGAGACTTTCAACATGTAGATTTGCTTCCAAGACTTCTGTCATAGAAGAGTACCTTTCCTGTTATCCCACGGTACC
TTCTTGAATTAATGAATCCACGGTACCTTCTTGAATTAACGAATCGTGGCTACCTTTTAGTTCATAAATTGCTATGGATG
GATATTGTGCCTTGCG-TTTATTTGTTGTATCAGAGCTAGCAAAAATCCAAGAGTACTTCTGTGGTGGTCTGAGAACATT
TTTTGGTCGCCCAAAGACATGTCTTCGCATGTTATGCTTTTTTTTACGTGCTGTAATTTTATTTGTATATCTATCTACTG
GGTGTTATTTCTAG--TCCTCTTGGTTCAACA-------TAGGCAGTTTCCTTT-CTTTCTAAAAACAAAACAAAACTTT
GCCTGTTGGGGTCTTTGTCGTGATCTAGTATCTTAATGTGAGATCTAGGTTTGAAGATCATGTCGTAAGGACCACAGTGG
GTGAAAGTGGATTTTGATTTGGCC-----GATTCGTTTGAAATTAATGCAGTTTTGAAATACCAAAAATACTCCATCCGT
CAGAAAAAACTTGTCGAACAAGCTTGGGACCAAGCTTTTACAAATGGAGAGAGTATCTTTGCATGGTGCTGATGTTGTCT
A-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------TTTTGTTTGTACTGAATATTCGTTGA-------------------TTGGGTGAAGATGC
GTGTAT----GTCTCATGTCCTGACACGCCCCATTGAATGGAAAAGCCCACGAGCACCCTGTAGCATTTGGGAATTTTAT
TTGTATAGACAAATATTAA-AAATCCTATGTCAAATATTAAGCATTTG--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------
>SNPs
--------------------------------------------------------------S-------S---------
----------S---------------------------------------------------------------------
-------------------------S------------------------------------------------------
------------S-----------------------------------------------------------S-------
-------------S-----S----------------------------------------S------------------S
-----------------S--------------------------------------------------------------
-------------------------------------------------S--S----S-------S-----S--------
------------------------------------------------SS--------S----------------S----
--------------------S----------S-----------------------SSSSSSS------------------
----S----------------------S---S----------S---------S-----------------S---------
--S--SS-------SS--S-SSS-SS----------S---S-------SS------S-S-------------------S-
------SSSSSSSS-----------------------S----------------S-------------------------
---S----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------S------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------S------------------------------------
--------------------------------------------------------------------------------
------------------------------------------S-S-----------------------------------
----------------------------------------------------------------S--S------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------S-
--------------------------------------------------------------------------------
-----------------------------------------------S-----------S--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------S---------------S-
--------------------------------------------------------------------------------
----------------------------------------------------S---------------------------
----------------------------------S-----------------------S---------------------
-----------------------------------S--------------------------------------------
-----------------------------S--------------------------------------------------
------------------------------------------------------------------S-------------
---------------------------------------------S----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------S----
--------------------------------------------------------------------------------
---------------S----------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------S---------------------------------------------------------
--------------------------------------------------------------------------------
---------------------S-------S--------------------------------------------------
-------------------------------------------------S-----------------------------S
----------------------------------------------------------------S---------------
--------------------------------------------------------------------------------
--------------------------------------S-----------------------------------------
-----------------------------------------------------------S--------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------S-------
-S-------------SS---S------S----------S-----------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------S--------S-------------------------
S--S----------------S---------------------------S---S---S-------SSS----S--------
-----------S---------------------S----S--------------------S--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
S-----------S-------------------------------------------------------------------
-----------------------S--------------------------------------------------------
--------------------------------------------------------S-------S---------------
-------------------------------S---------------------------S--------------------
---S-------S-S-SSSSSS---S---------S---------------------------------------------
-------------------------------------SSS--SSS-----------------------------------
-----------------------------S--------------S--------------------------------SS-
------------------------------------------------------------------S-------------
----------SSS
>forward_418
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------TG
GTCCATGTTGTGAGGCAG--------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_2128
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-----------------------------------------------CTACGAGGGCTGATTAGGCG-------------
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>forward_552
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----------------------------------------------------AGCTTATTGGGGTTGCTGCA--------
--------------------------------------------------------------------------------
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>reverse_2675
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----------------------------------TGCCAGCATTTTCATTTGTTTGC-----------------------
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>forward_1999
--------------------------------------------------------------------------------
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----------------------------------------------------------GTCCTGCTGAACATGCTTGTG-
--------------------------------------------------------------------------------
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>reverse_3710
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-----------------------------GTGAAGACGCAGCAGTTGTG-------------------------------
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>forward_3276
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--------------------------------------------------------TGACCAACTCGGCAAACCAA----
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>reverse_5484
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-------------------------------------------TTCCTTCTCGCAGGCCAAAT-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------
