>input_sequence_23753
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----------ATGGACGCAATGGAGGTCGAGGAGGGTCCTCTTCTGGCTATTGATGCCAAGGTATCATCTTAACTGTGGT
TTTATCTTGATTTCCAATGATAATATCTGTTGTTCAAGCTATAAGTGGTCTGCA-ATTATTTGTAGTTAAGAG-------
--TACTGTTTTTGTTGATTAATGAGATCTATTTGGGTTTGCTTTCTAAACTTACATCTTAGT-------ATAGCAGCACT
CTTAATTCCATTTTACTTCTACAGGGTGGGTA-TTTAACAGCTTTGTACTGTATA--AAGCA------GTTACAAATTAC
TGGAACCTTGTAGCTTCTCCTTTTT-GGGGGGATTTGTGTATGGGTGCCTAATCTGAAGAAATTGTGGTTTTTGCAGTTA
CACGCTGGAATGTGCAGAGCATTTCATCCTGCGGTTTCTAAACTTCTAGCGATTTTCCCGTTCATCGAAGCATCAAGGCC
CAGAAGCAAGTCTGGCATACAGGCACTTTGTTCACTGCATGTAGCTCTGGATAAATCCAAAGGTCTTCTTCAACATTGTG
CAGATTGCAGCCGGTTGTACTTGGTAAGATGTTGTACCCCTCCCTGCAGAGCACTCTTGA---TATAATTAGTTGCAAAC
CTGCCATGGGGCATTTGCAGCATTGCTTTTCAATATTTGTGTCTTTAGGATAAATAAAATGCCAAACTATTGCACTGATA
ATATTCACTTTCAGGCCATCACCGCAGAAACTGTGCATTTGAAGTTTGAGAAATCAAGAAGCCAACTTCAGGAAAGTCTA
CGGCGTGTCGAAAGCATAGTAACCGAAGATATTGGCCATAAGGTATGTTGTGTAAAATTCTAATTAGCACAACTAAATTG
TGCTTCTGTTTGGTTTCCTTGGACTACCAATCCCACATTATGCACCAGTTGTTT-ATGGTTAAACCATTTAGTAAATTTG
CATGGTATGTCCTGACATTCTGACACTGTCTGTGCGCAACAGATTGTAGAGATCATTGGTGAGTTGGAGGAGGTTGTATT
TACATTGGATCAATCAGAGAAGGAAGCTGGTGATGAGGTGATCAATTTGCTCCAGAGAAACAATAAAATGAACAGTTCCA
GCGATAGTGGGGAGCTTGAGGTCTTTCATATGGCTGCTCTGAAGCTGGGAATTACTTCTTCCAGGGCAGCATTGACTGAG
CGAAGAGCCCTCAAGAAGCTAATTGAAAAGGCTCGTTCTGGAGATGATAAGCGGAAGGAGTTTGTTGTGTCCTACCTATA
CAATCTCATGAGGAAATACTCTAAATTTTTCAGAAGTGAAGCAGGCGATGATACTGATTCTCAAGGATCAGCCCCATGTT
CACCTACAGTATTAGGCATGGATGACATGTATGGCCCCTGCGGAAATAGCCGAGCATTCAGTAGACAGCTTTCGAGCATT
CAATCATTTAATTCGAGGTTTGGGTCTTTCAATTCGAGGCTTGGATCATTCAATTGTAGGCCTAGTGGTCCAAGGTCCGA
AAACATGTCGATCCCTCCTGAGGAACTCAGATGTCCCATTTCCTTGCAGCTGATGTATGACCCAGTTATTGTTTCGTCTG
GTCAGACTTATGAGCGTGTTTGCATTGAGAAATGGTTTAATGATGGTCACAGCACATGTCCCAAGACTCAGCAACAACTG
GCCCACTTGTCTTTGACTCCAAACTACTGTGTTAAGGCCATGATTTCCAGCTGGTGTGAGCAGAATGATTTTCCAGTTCC
AGATGGTCCACCGGGATCCTTTGATGTAAATTGGAGGCTTGCTTTATCGGACTCCCAGGCAACGGGCTGTGTGTCTGTTG
ATAGTTTTGACACTAGCAACATCAAGGGTGTCAAGGTGGTTCCCCTGGAGAACGAGAGAAAAGAAGAACCTGCAAACAGC
GAGTCAGGCACATTGGATGATAGCTCTTGTTTTGAGTTTGATATGAATGAGGGGTATCGGAACTTGCTGCTGGTGCTTAA
TGAAAGAAACAACATACTGAGCCGGTGCAGATTGGTTGAGCAGATAAGATATCTGCTGAAAGACGATGAGGAAGCAAGGA
TCCAGATGGGCTCAAATGGGTTCGCTGAGGCTCTAGTTCAGTTCTTAAGGTATTCTGTGGAAGAAGGAAATGAGAAGGCA
CAAGAAGTTGGTGCCATGGCTCTTTTCAACCTTGCAGTCAATAATAATAGGTATGACATGTATTTTTCAGTTAAATGGTG
CTTGTCATTTGCAGCT----AGTTGACCTTGAACTTTTGAATTTCCATTTTTTACTTACCAAAAACCATTCTTGTTTGTT
TCAGAAACAAGGGACTTCTGTTGTCTGCTGGAATAGTCGAACTACTTGAGCAGATGACCTCGAATCCGCGCCTAGCTGCT
GCAGCCACAGCGCTCTACCTTAACCTTTCCTGCCTCACCGACGCGAAGAGCGTGATTGCTTCCACCCAGGCCGTGTCATT
CCTAGTGGACCGTCTGTACAACCACGACGCCTGCGACCCGAAAGCCAGCTCCTGCAAGCATGATGCTCTCTACACGCTGT
ACAACCTCTCCACCCACCAGGCCAGCATCCCGTCGCTCCTGTCGGCCGGCATCGTGGATGCGCTCCACACGCTCCTGACG
GACTCCTCGGTGTCCGAGGGCATCGGGTGGACGGAGAAGGCCCTGGCGGTGGCCATCAGCCTGGCGGCGACCCAGGCCGG
CAGGAAGGAGATGATGTCCACCCCGGGGCTGGTGAGCACGCTGGCGATGCTGCTGGACACGGGGGAGCCGACGGAGCAGG
AGCAGGCGGTGTCGTGCCTCCTGGCGATGTGCACGGCGGACGACAAGTGCATCGCGCCAGTGCTGCAGGAGGGCGTGGTG
CCGTCGCTGGTCTCCATCTCGGCGACCGGCACGGGGCGGGGGCGGGAGAAGGCCCAGAAGCTGCTGAAGCTGTTCCGGGA
GCAGCGGCAGCGTGA---CGGTGGGCAACCGCCCGCGTCTCAGCAGCAG---CAGCAGCAGGCCCCGTCGTCGGAGGCCG
GGAACGGGAACGGGAACGGCGGC------------GGGGTGATGGTGTGCCACCGGGAGTCGAAGCCGCTGTGCAAGTCC
AAGTCGAGGAAGCTGGGGCGGACGCTGAGCTCGCTGTGGAAGAACCGGGGCTTCTCCCTCTACCAGTGCTAG--------
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>chr3B_1_TraesCS3B01G426600
TCGCCACGCCGTCCGCCGCA-GCCGCCGCCGGCGACCGTCGGAGACACCCACGGGGAGAGACCCGTCCGCCGCAGCGGCC
CTCGCGAGGCATTCCCTCC--CGCCCTCTTCGCTCGAGACGGTGCGTCTTTATTTCGGCTCGTCTCTTCGCCGCCATGGA
TCGCTGCTCGCCTTTTTTTCCTTTGCCCGCTGCCCGGTCCGAGAGATTAGGGCTTAGAGTGAGCTTCGCCGGGGCGGGAT
GTGACCTTGGGGGTGGTCTGAGCTGCCTGT-------------------GTGTGTTTCCCTGCTCCTCTTTTCCTGAGCG
AGCTCCGCCATTGGGGATCTCCGGGGAGGGAGCCTGC-CGTGTTCGTGCGGCTTCACCATGCCAGGTTCACGCGAGGAAA
AGTCTCCTTCCGATGGATTTCTGGCATTTCATTTGAGAAACGGAGCCCGAATGGCAGATTTGCGGAGCTGAAAACGATGT
TTCAGAGCGCTCCTTATCCTGTGGCCGGCCTTGCCCACTCCGGAGGAAACTGCTTTAAATCCCACACTGCTTGTCAGGCC
GAGAGAAACTTGAACAGGCTGCCGACCTCATCTTAATTTCTTTTGGG---TTTTCTTGGGGTGACGCGGTGAGCGAAATG
CGCGGC-------------------TCTGGCTGACCGGCAGCGCCCGTGGC---CCCTTGGATTTGCTGGGAAAAGAGGC
GAGCTTGGTCAAAATCATGGGCTCCAGGAAGCTCCGCGCGTCTCAAATTTAGCA-TGGAAAGGTCGTGCTCAGCTGGTGG
TTTTCCGAAAGGTGCCTCCTGGAGAACACTGTGTTGTAGGCTTGCAGCCGGTAGATTTTTTACCATTCCTATCCCCTTTT
TTCGTACTGGTTCCGGGAGCGTTGCTTTGTCCTATGCTCCCAAGTCCAGGCCTGTTGTTTTCACCGGTCTGAAATGCTTG
CAACTGAGAGTGATGTGATCTGCCGATCTGACTTTTTTTTCCCTTCTGAATCTTGCAATC-AGATGGTGGAGCTTAGGAG
ATAGTCAAGCATGGACGCAATGGAGGTCGAGGAGGGTCCTCTTCTGGCTATTGATGCCAAGGTATCATCTTAACTGTGGT
TTTATCTTGATTTCCAATGATAATATCTGTTGTTCAAGCTATAAGTGGTCTGCA-ATTATTTGTAGTTAAGAG-------
--TACTGTTTTTGTTGATTAATGAGATCTATTTGGGTTTGCTTTCTAAACTTACATCTTAGT-------ATAGCAGCACT
CTTAATTCCATTTTACTTCTACAGGGTGGGTA-TTTAACAGCTTTGTACTGTATA--AAGCA------GTTACAAATTAC
TGGAACCTTGTAGCTTCTCCTTTTT-GGGGGGATTTGTGTATGGGTGCCTAATCTGAAGAAATTGTGGTTTTTGCAGTTA
CACGCTGGAATGTGCAGAGCATTTCATCCTGCGGTTTCTAAACTTCTAGCGATTTTCCCGTTCATCGAAGCATCAAGGCC
CAGAAGCAAGTCTGGCATACAGGCACTTTGTTCACTGCATGTAGCTCTGGATAAATCCAAAGGTCTTCTTCAACATTGTG
CAGATTGCAGCCGGTTGTACTTGGTAAGATGTTGTACCCCTCCCTGCAGAGCACTCTTGA---TATAATTAGTTGCAAAC
CTGCCATGGGGCATTTGCAGCATTGCTTTTCAATATTTGTGTCTTTAGGATAAATAAAATGCCAAACTATTGCACTGATA
ATATTCACTTTCAGGCCATCACCGCAGAAACTGTGCATTTGAAGTTTGAGAAATCAAGAAGCCAACTTCAGGAAAGTCTA
CGGCGTGTCGAAAGCATAGTAACCGAAGATATTGGCCATAAGGTATGTTGTGTAAAATTCTAATTAGCACAACTAAATTG
TGCTTCTGTTTGGTTTCCTTGGACTACCAATCCCACATTATGCACCAGTTGTTT-ATGGTTAAACCATTTAGTAAATTTG
CATGGTATGTCCTGACATTCTGACACTGTCTGTGCGCAACAGATTGTAGAGATCATTGGTGAGTTGGAGGAGGTTGTATT
TACATTGGATCAATCAGAGAAGGAAGCTGGTGATGAGGTGATCAATTTGCTCCAGAGAAACAATAAAATGAACAGTTCCA
GCGATAGTGGGGAGCTTGAGGTCTTTCATATGGCTGCTCTGAAGCTGGGAATTACTTCTTCCAGGGCAGCATTGACTGAG
CGAAGAGCCCTCAAGAAGCTAATTGAAAAGGCTCGTTCTGGAGATGATAAGCGGAAGGAGTTTGTTGTGTCCTACCTATA
CAATCTCATGAGGAAATACTCTAAATTTTTCAGAAGTGAAGCAGGCGATGATACTGATTCTCAAGGATCAGCCCCATGTT
CACCTACAGTATTAGGCATGGATGACATGTATGGCCCCTGCGGAAATAGCCGAGCATTCAGTAGACAGCTTTCGAGCATT
CAATCATTTAATTCGAGGTTTGGGTCTTTCAATTCGAGGCTTGGATCATTCAATTGTAGGCCTAGTGGTCCAAGGTCCGA
AAACATGTCGATCCCTCCTGAGGAACTCAGATGTCCCATTTCCTTGCAGCTGATGTATGACCCAGTTATTGTTTCGTCTG
GTCAGACTTATGAGCGTGTTTGCATTGAGAAATGGTTTAATGATGGTCACAGCACATGTCCCAAGACTCAGCAACAACTG
GCCCACTTGTCTTTGACTCCAAACTACTGTGTTAAGGCCATGATTTCCAGCTGGTGTGAGCAGAATGATTTTCCAGTTCC
AGATGGTCCACCGGGATCCTTTGATGTAAATTGGAGGCTTGCTTTATCGGACTCCCAGGCAACGGGCTGTGTGTCTGTTG
ATAGTTTTGACACTAGCAACATCAAGGGTGTCAAGGTGGTTCCCCTGGAGAACGAGAGAAAAGAAGAACCTGCAAACAGC
GAGTCAGGCACATTGGATGATAGCTCTTGTTTTGAGTTTGATATGAATGAGGGGTATCGGAACTTGCTGCTGGTGCTTAA
TGAAAGAAACAACATACTGAGCCGGTGCAGATTGGTTGAGCAGATAAGATATCTGCTGAAAGACGATGAGGAAGCAAGGA
TCCAGATGGGCTCAAATGGGTTCGCTGAGGCTCTAGTTCAGTTCTTAAGGTATTCTGTGGAAGAAGGAAATGAGAAGGCA
CAAGAAGTTGGTGCCATGGCTCTTTTCAACCTTGCAGTCAATAATAATAGGTATGACATGTATTTTTCAGTTAAATGGTG
CTTGTCATTTGCAGCT----AGTTGACCTTGAACTTTTGAATTTCCATTTTTTACTTACCAAAAACCATTCTTGTTTGTT
TCAGAAACAAGGGACTTCTGTTGTCTGCTGGAATAGTCGAACTACTTGAGCAGATGACCTCGAATCCGCGCCTAGCTGCT
GCAGCCACAGCGCTCTACCTTAACCTTTCCTGCCTCACCGACGCGAAGAGCGTGATTGCTTCCACCCAGGCCGTGTCATT
CCTAGTGGACCGTCTGTACAACCACGACGCCTGCGACCCGAAAGCCAGCTCCTGCAAGCATGATGCTCTCTACACGCTGT
ACAACCTCTCCACCCACCAGGCCAGCATCCCGTCGCTCCTGTCGGCCGGCATCGTGGATGCGCTCCACACGCTCCTGACG
GACTCCTCGGTGTCCGAGGGCATCGGGTGGACGGAGAAGGCCCTGGCGGTGGCCATCAGCCTGGCGGCGACCCAGGCCGG
CAGGAAGGAGATGATGTCCACCCCGGGGCTGGTGAGCACGCTGGCGATGCTGCTGGACACGGGGGAGCCGACGGAGCAGG
AGCAGGCGGTGTCGTGCCTCCTGGCGATGTGCACGGCGGACGACAAGTGCATCGCGCCAGTGCTGCAGGAGGGCGTGGTG
CCGTCGCTGGTCTCCATCTCGGCGACCGGCACGGGGCGGGGGCGGGAGAAGGCCCAGAAGCTGCTGAAGCTGTTCCGGGA
GCAGCGGCAGCGTGA---CGGTGGGCAACCGCCCGCGTCTCAGCAGCAG---CAGCAGCAGGCCCCGTCGTCGGAGGCCG
GGAACGGGAACGGGAACGGCGGC------------GGGGTGATGGTGTGCCACCGGGAGTCGAAGCCGCTGTGCAAGTCC
AAGTCGAGGAAGCTGGGGCGGACGCTGAGCTCGCTGTGGAAGAACCGGGGCTTCTCCCTCTACCAGTGCTAGCCTAGCAG
GCAGGCAGGGTTTTGGGGCCTGGTTCATCATCATCATCAGTAGGATCTGTACATCTCCTCTTTCTTGTTTCTCTTTTCCT
TGGGTCTGCTTCCGCTCTGGCGCCGTGGCTGCTG----CTTCCTTTGGGTTTGGGTTAAGTAAAAGTTGAAAGAGACTAG
TGCTTCGTCCCCCCCTGCTCGGTGGGGTGATGTAGGGCATTTTCCCCCTCTTTGCCGCCTTCTCATGGCACTGTACAATG
TATATATAGCCTGCCTTGTTACGAGATGCTCCTCTC-----------TTTCAGTGAAGCAACCGTTTGTTCTCTTTTGTC
GATAATACGACGACCCTCTGCATGCTCACTGACATGTGGGCTCCATG---GTCCTGTGAAGCAAATTTCGTTCTTCAGGG
AGGCTCAACTCCTCATCAAGGAGCTTTATTTATTTGTTCACGATAATCCTGCTGGTTGCTCATCCAGGTGAGTTGGGTTC
CT-TTTGTCCTGTCATTGATT---ATCGGCTGTTGA---TGCGTGAAAGGATCCAGAGGCCTCGCCGAGATAATGA--CA
CACTGACATGGCCAGGGGCCAGGGCCGACATGAAAGGATGCATGAGAGGG-AA-----AAAAAGGACTGGCTACCACGGC
TTGCGTCTGACAGCACGAATGGTC----AGGTTCATTTTCATTCACGTGCTGTCCCGTTCGTCGCACGAGATGATTGTGC
TTTCGTTTCGAGTTCGGCAGGA-----------GTCTCATTTCACTTGGTCGAGCGGTTCTCAAGGAGGGGAACGCCA--
---AAAAGCGCCGCTCGCTCTAAAGAGGATTTAATTAGATTATAGGAGGCCCCCGGTTATTTGTGGCGGGAAAG-----C
AGCCGCGGGGGCCGGGGCGGAGGGAGGG---------GGCGTCGGCCGTCGGTGGGCTCGATGGGACGCGGCGGCGGCGA
GGCCTAGCCTCCACCCGGCCAGCCCCGGCGGGACGAGGAGGAGAAAGCCGGCCTGCTGAAAAGTGAATCCGATTCCACGC
CCATCCCCCCCTCAACCCG
>chr3A_1
TCACCACGCCGCCCGCCGCCCGCCGCCGCCGGCGACCGACGGAGACACCCGCGGGGAGAGACCCGTCCGCCGTAGCGGCC
CTCCCGAGGCATTTCCCGCCTCGCTCTCTTCGCTCGAGACGGTGCGTGTTCTGA----CTCGTCTCTT-GCCGCCATGGA
TCGTTCCTCGCCTC----TCCTTTCCCCGCTGTTCGGTCCGGGAGATTAGGATTCAGAGTAAGCTTTGGTGGGGCGGGAT
GTGACCTTGGGGGTGCTCTGGGCTGCTTGTGCGTCCTCTCTGCGCGCGCGTGTGCTTCTCTGCTCCTCTTTCTCTGGGCG
AGCTCCGCCATTGGGGATCTCCGGGGAGGAAGCCTGC-GGTGTTCGTGCGGTTCCACCATGCTAGTTTTACGCGAAGAAA
GGCCTCCTCCCGATGGATTTCTGGCATTTTCATCCGAGGAACGAGCCCGAATGGCAGATTTGCGGGGCTGAAAACGATGT
TTCAGAGCGCTCCTTATCCTGTGGCCGGCCTTGCCCACTCCGGAGGAAGCTGCTTTAAATCCCACACTACTTGTCAGGCC
GAGAGAAGCTCGAGCGAGCTGCCGACCTCATCTTAATTTTCTTTTGAG-TTTTTCTTGGGGAGACGCGGTGAGCGAAATG
CGCTGCAGCGCTGGCTGGCTGGCTGGCTGGCTGGCTGGCAGCGCCCGCCCGTGGCCCTTGGATTTGCTGGGGAAAGAGGC
GAGCTTGGTCAAAATCATGGGCTCCAGGGAGCTCCGCGCGTCTCAAATTTAGCATGGAAAAGGTCGTGCTCGCTTGGTGG
TTTTCCGAAAGGTGCCTCCTGGAGAACACTGTGTTGTGGGCTTGCAGCGGGTAGATTTTTTACTATTCCCATCCCCTCTT
TTCGTACTGGTTCCGGGAGCGTTGCCTTGTCCTATCCTCCCAAGTCCAGGCCTGTTGTTTTCGCCGGTCTGAAATGCTTG
CAACTGAGAGTGATGTGATCTGCCGATCTGACTTTTTTTTCCCTTCTGAATCTTGCAAATTAGATGGTGGAACTGACGAG
ATAGTCAAGCATGGACGCAATGGAGGTCGAGGAGGGCCCTCTCTTGGCTATTGATGCCAAGGTACCATCTTAACTGTGGT
TTTATCTTGATTTTCAGTGATAATATCTGTTGTTCAAGCTAATTG--GTCTGCAGATTATTTGCAGTTAAGAGTTTAGAA
TATACTGTTTTTGTTGATTAATGAGATCTATTTGGATTTGCTTTGTAAACTTACATCTTAGTGACTGTTTTAGCAGCACT
CTTAATTCCGTTTTATTTCTACAGGATGGGTATTTAA--AGCTTTGTACTGTATAGGAAGCAAAGCATATTAGAAATAAC
TGGAACCTTGTATCTTCTCTTTTTT-GGGTGGATTTGTGTATGGCTGCCTAATCTGAAGAAATTGTGTTTTCTGCAGTTA
CATGCTGGAATGTGCAGAGCATTTCATCCTGCGGTTTCTAAACTTTTAGCGATTTTCCCGTTCATCGAAGCATCAAGGCC
CAGAAGCAAGTCTGGCATACAGGCACTGTGTTCGCTGCATGTTGCTCTGGATAAATCCAAAGGTCTTCTTCAACATTGCG
CAGATTGCAGCAGGCTCTACTTGGTAAGATGTTGTACCCCTCCCTGCCGAGCACTCTGGATATTATAATTAGTTGCAAAC
TTGCCATGGGGCATTTGCAGCATTGCTTTTCAATATTTGTGTCTTTAGAATAATTAAACTGCGAAACTCTTACACTGATA
ATATCCACTTTCAGGCCATCACCGCAGAAACTGTGCATTTGAAGTTTGAGAAATCAAGAAGCCAACTTCAGGAAAGTCTT
CGGCGTGTCGAAAGCATAGTAACCGAAGATATTGGCCATAAGGTATGTTGTGTAAAATCCTAATTAGCACAACTAAATTG
TGCTTCTGTTTGGTTTCCTTGGACTACAAATCCCACATTATGCACCAGTTGTTTTATGGTTAAACCATTTAGTAAATTTG
CGTGCTATGTCCTGACATCCTGATCCTGTCTGTGCGCAACAGATTGTAGAGATCATTGGTGAGTTGGAGGAGGTTGTATT
TACATTGGATCAATCAGAGAAGGAAGCTGGTGATGAGGTGATCAATTTGCTCCAGAGAAACAGTAAAATGAACAGTTCCA
GCGATAGTGGGGAGCTTGAGGTCTTTCATATGGCTGCTCTGAAGCTGGGAATTACTTCTTCCAGGGCAGCATTGACTGAG
AGAAGAGCCCTCAAGAAGCTAATTGAAAAGGCTCGTTCTGGAGATGATAAGCGGAAGGAGTTTGTTGTGTCCTACCTATA
CAATCTCATGAGGAAATACTCGAAATTTTTCAGAAGTGAAGCAGGCGATGATACCGATTCTCAAGGATCAGCCCCATGTT
CACCTACAGTATTAGGCATGGATGACATGTATGGCCCCTGCGGAAACAGCCGAGCATTCAGTAGACAGCTTTCGAGCATT
CAATCATTTAATTCGAGGTTTGGGTCTTTCAATTCGAGGCTTGGATCATTCAATTGTAGGCCTAGTGGTCCAAGGTCCGA
AAACATGTCGATCCCTCCCGAGGAACTCAGATGTCCCATTTCCTTGCAGCTGATGTATGACCCGGTTATTGTTTCGTCTG
GTCAGACTTATGAGCGTGTTTGCATTGAAAAATGGTTTAATGATGGTCACAGCACATGTCCCAAGACTCAGCAACAACTG
GCCCACTTGTCTTTGACTCCAAACTACTGTGTTAAGGCCATGATTTCCAGCTGGTGCGAGCAGAATGATTTTCCAGTTCC
AGATGGTCCACCGGGATCCTTTGATGTAAATTGGAGGCTTGCTTTATCTGACTCCCAGGCGACGGGCTGTGTGTCTGTCG
ATAGTTTTGACACTAGCAACATCAAGGGTGTCAAGGTGGTTCCCCTGGAGAACGAGAGAAAGGAAGAACCGATGAACAGC
GAATCAGGCACATTGGATGATAGCTCTTGTTTTGAGTTTGATATGAATGAGGGGTATCGGAACTTGCTGCTGGTGCTTAA
TGAAAGAAACAACATACTGAGCCAGTGCAGATTGGTTGAGCAGATAAGATATCTGCTGAAAGATGATGAGGAAGCAAGGA
TCCAGATGGGCTCAAATGGGTTCGCTGAGGCCCTAGTTCAGTTCTTAAGGTATTCTGTGGAAGAAGGAAATGAGAAGGCA
CAAGAAGTTGGTGCCATGGCTCTTTTTAACCTTGCAGTCAATAATAATAGGTATGCCATGTATTTTTCAGTTAAATGGTG
CTTGTCATTTGCAGCTAGTTAGTTGACCTTGAACTTCTGAATTTCCAGTTTTTGCTTACAAACC-CTATGCTTGTTTATT
TCAGAAACAAGGGACTTCTGTTGTCTGCTGGGATAGTCGAACTACTTGAGCAGATGACATCGAATCCACGCCTAGCTGCT
GCAGCCACGGCGCTCTACCTTAACCTTTCCTGCCTCACCGACGCGAAGAGCGTCATCGCTTCCACCCAGGCTGTGCCATT
CCTAGTGGACCGTCTGTACAACCACGACGCCTGCGACCCGAAAGCCAGCTCCTGCAAGCATGATGCTCTCTACACGCTGT
ACAACCTCTCCACCTACCAGGCCAGCATCCCGTCGCTCCTGTCGGCCGGCATCGTGGACGCGCTCCACACGCTCCTGACG
GACTCTTCGGTGTCCGAGGGCATCGGGTGGACGGAGAAGGCCCTGGCGGTGGCCATCAGCCTGGCGGCGACCCAGGCCGG
CAGGAAGGAGATCATGTCCACCCCGGGGCTGGTGAGCACGCTGGCGATGCTGCTGGACACGGGGGAGCCGACGGAGCAGG
AGCAGGCGGTGTCGTGCCTCCTGGCGATGTGCGCGGCGGACGACAAGTGCATCGCGCCGGTGCTGCAGGAGGGCGTGGTG
CCGTCGCTGGTCTCCATCTCGGCGACCGGCACGGGGCGGGGCCGGGAGAAGGCCCAGAAGCTGCTGAAGCTGTTCCGGGA
GCAGCGGCAACGGGACGGCGGGGGGCAGCAAGCCGCGTCGCAGCAGCAGGCACCGCCGCAGCAGGCCGCGCCGGAGGGCG
GGAACGG------------CGGC------------GGGGTGATGGTGTGCCACCGGGAGTCGAAGCCGCTGTGCAAGTCC
AAGTCGAGGAAGCTGGGGCGGACGCTGAGCTCGCTGTGGAAGAACCGGGGCTTCTCCCTCTACCAGTGCTAGCCTCTA--
GCAGGCAGGGTTTTGGGGCCTGGTTCATC---ATCATCAGTAGGATCTGTACATCTCCTCTTTCTTGTTCCTTTTTTCCT
TGGGTCGTCTTCCGCTTTGGCGCCGTGGCTGCTTCTTCCTTCCTTTGGGTTTGGGTTAAGTAA--GTTGAAAGAGACTAC
TGCTTCTTCCCCCCCTGCTCGGTGGGGTGATGTAGGGCATTTTCCCCCTCTTTGCCGCCTTCTCATGACACTGTACAATG
TATATATAGCCTGCCTTGTTACGAGATGATGCCTCTCTTCCCTTCCTTTTCAGTCAAGCAACCGTTTGTTCTCTTTTGTC
AACACGACGGTCCTC-------TGCTCACTGACATGTGGGCTCCATG---GTCCTGTGAAGCTAATTTCGTTCTTCAGGG
AGGCTCGACTCCTCATCAAGGAGATTTATTTACTTGCTCACGGTAATCCCGCTGCTTGCTCATCCAGGTGGGGTGGGTTC
CTTTTTGTCCTGTCACTGATTATCATCGGCTGCTGCCTCTGCGTGGAAGGACGCAGAGGCCTCGCCAAGATAACGA--CA
CTGACAT---------GGCAAGGGCCAACATGAATGGATGCATGAGACTGTGAGAGGGAAAAAGGACCGGCCACCACGGC
TTGCGTCCGACAGCACGGAGGAAGGGCGAGGTTCATTTTCACTCACGTGCTGTCCCGTTCTCCGCACGGGATGATTGCGC
GGCAGGCGCGCGAATTTTGGCATCATCCGTCGGGTTTCACCTCACCTGGTCGAGCGGCTCTCGAGGAGCGGAGCGGAGCA
CCGAAAGGCGCCGCTGGCTCCGGAGGGGATCTGATTTAATTAGGA---GCCCCCGGTTATTTGTGGCGGGAAGCCAAGCC
AGCCGCGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGGGGCGTCGGCCGTCGGTCGGTTCGATGGGACGCGGCGGCGGCGA
GG----GCCTCCACCCGGCCAGCCCCGGCGG-------------------------------------------------
-------------------
>chr3D_136
--------------------------------------------------------------------------------
----------------------------------------------------------CTCGTCTCTT-GCCGCCATGGA
TCGTTCCTCGCCTC----TCTTTCCCCCGCTGTTCGGTCCGGGAGCTTAGGATTTAGAGTAGGCTTTGCCGGGGCGGAT-
------------GTGGCCTGAGCTGGCTGCGTGT-CTCTCTGTGCGCGTGTGTGCTTCTCCGCTCCTTTTTTTCCGCGCG
AGCTCCGCCATTGGGGATCTCCGGGGAGGGAGCCTGCCCGTGTTCGTGCGGCTCCACCATGCTAGTTTTACGCAAAAAAA
GGCCTCATCCCGATGGATTTCTGGCATTTCATTTGAGGAGCTCGCTCA-AATGGCAGATTTGCGGGGCTGAAAACGATGT
TTCAGAGCGCTCCTTATCTTGTGGCCGGCCTTGCCCACTCCGGAGGAAACTGCTTTAAATCCCACACTGCTTGTCAGGCC
GAGAGAAACTCGAGCGAGCTGCCGACCTCATCTTAATTTCTTCTGAGTTTTTTTTTCTGGGGGACGCGGTGACCGAAATG
CGCGGC-------------------GCTGGCTGACTGGCAGTGCCCGTGGC---CCCTTGGATTTGCTGGGGAAAGAGGC
GAGCTTGGTCAAAATCATGGGCTCCAGGGAGCTCCGCGCGTCTCAAAATTAGCAATGGAAAGGTCGTGCTTGCTTGGTGG
TTTTCCGAAAGGTGCCTCCTGGAGAACACTGCGTTGTAGGCTTGCAGCGGGTAGATTTTTTACCATTCCTATCCCCTCTT
TTCGTACTGGTTCCGGGAGCGTTGCCTTGTCCTATCCTCCCAAGTCCAGGCCTGTTGTTTTCACCGGTCTGAAATGCTTG
CAACTGAGAGTGATGTGATCTGCCGATCTGACTTTTTTTTCCCTTCTGAATCTTGCAATC-AGATGGTGGAGCTCACGAG
ATAGTCAAGCATGGACGCAATGGAGGTCGAGGAGGGTCCTCTTCTGGCCATTGATGCCAAGGTACCATCTTAACTGTGGT
TTTATCTTGATTTTCAGTGATAATATCTGTTGTTCAAGCT-TAAGTTGTCTGCAGATTATTTGTAGTTAATAGTTTAGAA
TATTTT-TTTTTGTTGATTAATGAGATCTATTTGGATTTGCTTTGTAAACTTACATCTTAGT-------TTAGCAGCACT
CTTAATTCCATTTTACTTCTACATGGTGGGTATTTTAACAGCTTTGTACTGTATA--AAGCAAAGAATGTTAGAAATTAC
TGGAACCTTGTATTTTCTCCTTTTTCGGGGTGATTTGTGTATTGTTGCTTAATCTGAAGAAATTGTGGTTTTTGCAGTTA
CACGCTGGAATGTGCAGAGCATTTCATCCTGCGGTTTCTAAACTTTTAGCGATTTTCCCGTTCATCGAAGCATCAAGGCC
CAGAAGCAAGTCTGGCATACAGGCACTGTGTTCACTACATGTAGCTCTGGATAAATCCAAAGGTCTTCTTCAACATTGTG
CAGATTGTAGCCGGCTGTACTTGGTAAGATGTTGTACCCCTCCCTGCAGAGCACTCTTGA---TATAATTAGTTGCAAAC
CTGCCATGGGGCATTTGTGGCATTGCTTTTCAATATTTGTGTCTTTAGAATAATTAAAATGCCAAACTCTTACACTGATA
ATATTCACTTTCAGGCCATCACCGCAGAAACTGTGCATTTGAAGTTTGAGAAATCAAGAAGCCAACTTCAGGAAAGTCTT
CGGCGTGTTGAAAGCATAGTAACCGAAGATATTGGCCATAAGGTATGTTCTGCAAAATTCTAATTAGCACAACTAAATTG
TGCTTCTGTTTGGTTTCCTTGGACTACAAATCCCACATTATGCACCAGTTGTTTTATGGTTAAACCATTTAGTAAATTTG
CGTGGTATGTCCTGAC-TCCTGATCCTGTCTGTGCGCAACAGATTGTGGAGATCATTGGTGAGCTGGAGGAGGTTGTATT
TACATTGGATCAATCAGAGAAGGAAGCTGGTGATGAGGTGATCAATTTGCTCCAGAGAAACAATAAAATGAACAGTTCCA
GCGACAGTGGGGAGCTTGAGGTCTTTCATATGGCTGCTCTGAAGCTGGGAATTACTTCTTCCAGGGCAGCATTGACTGAG
AGAAGAGCCCTCAAGAAGCTAATTGAAAAGGCTCGTTCTGGAGATGATAAGCGGAAGGAGTTTGTTGTGTCCTACCTATA
CAATCTCATGAGGAAATACTCGAAATTTTTCAGAAGTGAAGCAGGCGATGATACCGATTCACAAGGATCAGCCCCATGTT
CACCTACAGTATTAGGCATGGATGACATGTATGGCCCCTGCGGAAATAGCCGAGCATTCAGTAGACAGCTTTCGAGTATT
CAATCATTTAATTCGAGGTTTGGGTCTTTCAATTCGAGGCTTGGATCATTCAATTGTAGGCCTAGTGGTCCAAGGTCCGA
AAACATGTCGATCCCTCCTGAGGAACTCAGATGTCCCATTTCCTTGCAGCTGATGTATGACCCGGTTATTGTTTCGTCTG
GTCAGACTTATGAGCGTGTTTGCATTGAAAAATGGTTTAATGATGGTCACAGCACATGTCCCAAGACTCAGCAACAACTG
GCCCACTTGTCTTTGACTCCAAACTACTGTGTTAAGGCCATGATTTCCAGCTGGTGTGAGCAGAATGAGTTTCCAGTTCC
AGATGGTCCACCGGGATCCTTTGATGTAAATTGGAGGCTTGCTTTATCGGACTCCCAGGCAACAGGCTGTGTGTCTGTTG
ATAGTTTTGACACCAGCAACATCAAGGGTGTCAAGGTGGTTCCCCTGGAGAACGAGACAAGAGAAGAACCGGCAAACAGC
GAATCAGGCACATTGGATGATAGTTCTTGTTTTGAGTTTGATATGAATGAGGGGTATCGGAACTTGCTGCTGGTGCTTAA
TGAAAGAAGCAACATACTGAGCCAGTGCAGATTGGTTGAGCAGATAAGATATCTGCTGAAAGATGATGAGGAAGCAAGGA
TCCAGATGGGCTCAAATGGGTTTGCTGAGGCTCTAGTTCAGTTCTTAAGGTATTCCGTGGAAGAAGGAAATGAGAAGGCA
CAAGAAGTTGGTGCCATGGCTCTTTTCAACCTTGCAGTCAATAATAATAGGTATGACATGTATTTTTCAGTTAAATGGTG
CTTGTCACTTGCAGCT----AGCTGACCTTGAACTCTTGAATTTACATTTTTTGCTTACCAAACACTATGCTTGTTTATT
TCAGAAACAAGGGACTTCTGTTGTCTGCTGGAATAGTCGAACTACTTGAGCAGATGACCTCGAATCCACGCCTAGCTGCT
GCAGCCACGGCGCTCTACCTTAACCTTTCCTGCCTCACCGACGCGAAGAGCGTGATTGCTTCCACGCAGGCTGTGCCATT
CCTAGTGGACCGTCTGTACAACCACGATGCCTGCGACCCGAAAGCCAGCTCCTGCAAGCATGATGCCCTCTACACGCTGT
ACAACCTCTCCACCCACCAGGCCAGCATCCCGTCGCTCCTGTCGGCCGGCATCGTGGATGCGCTCCACACGCTCCTGACG
GACTCCTCGGTGTCCGAGGGCATCGGGTGGACGGAGAAGGCCCTGGCGGTGTCCATCAGCCTGGCGGCGACCCAGGCCGG
CAGGAAGGAGATCATGTCCACCCCGGGGCTGGTGAGCACGCTGGCGATGCTGCTGGACACGGGGGAGCCGACGGAGCAGG
AGCAGGCGGTGTCGTGCCTCCTGGCGATGTGCGCGGCGGACGACAAGTGCATTGCGCCGGTGCTGCAGGAGGGCGTGGTG
CCGTCGCTGGTCTCCATCTCGGCGACCGGCACGGGGCGGGGGCGGGAGAAGGCCCAGAAGCTGCTGAAGCTGTTCCGGGA
GCAGCGGCAGCGTGA---CGGTGGGCAACCGCCCGCGTCTCAGCAGCAG---CAGCAGCAGGCCCCGTCGTCGGAGGCCG
GGAACGGGAACGGGAACGGGAACGGGAACGGCGGTGGGGTGATGGTGTGCCACCGGGAGTCGAAGCCGCTGTGCAAGTCC
AAGTCGAGGAAGCTGGGGCGGACGCTGAGCTCGCTGTGGAAGAACCGCGGCTTCTCCCTCTACCAGTGCTAGCCT--A--
GCAGGCAGGTTTTTGGGGCCTGGTTCATC---ATCGTCAGTAGGATCTGTACATCTCCTCTTTCTTGTTTCTTTTTTCCT
TGGGTCTTCTTCCGCTTTGGCGCC-------------------------TTTGGGTTAAGTAA--GTTGAAAGAGACTAC
TGCTTCTTCCCCCCCTGCTCGGTGGGGTGATGTAGGGCATTTTCCCCCTCTTTGCCGCCTTCTCATGACATTGTACAATG
TATATATAGCCTGCCTTGTTACGAGATGATGCTTGTCTC-----CCTTTTCAGTCAAGCAACCGTTTGTTCTCTCTTGTC
AATTCGACGATCCTC-------TGCTCACTGATATGTGGGCCCCATGATGGTCCTGTAAAGCTATTTT-GTTCTTGAGGG
AGGCTCAGCTCCCCAGCAAGGAGATTTATTTATTTTCTCACTATAATCCCGCTGCTTGCTCATCCAGGTGAGGTGGGTTC
CTTTTTGTCCTGTCACCGATTATCATCGGCTGCTGA---TGCATGAAAGGATCCAGAGGCCTCGCCAAGATAACGACGCA
CTGACAT---------GGCAAGGGCCGGCATGAATGGATGCATGAGAGGGGAA-----AAAAAGGAGTGGCCACAACGGC
TTGCGTCTGACAGCACGGAGGAAGGAAG-GGTTCATTTTCACTCACGTGCTGTCCCGTTCTTGGCACGGGATGATTGTGC
TTTCGTTTCGAGTTCGGCAGGA----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------
>SNPs
--S--------S-------S------------------S-----------S---------------------S-------
---S---------S--SS------S----------------------S--SSSSSSSS----------S-----------
---S-S-------SSSSS------S-------SS-------S---------SS-------S-----S-------------
------------------------------------------------------S---S-------------S---S---
-----------------------------------------------------S--------S--S--S------S----
S-S-----S----------------------------S---S-----------------------S--------------
--------------------------------------------------------------------------------
----------S--S-SS--------------------------------------------S------------------
-------------------------S---------S-----------------------------------S--------
----------------------------S------------------------------------------SSS------
------------------------------------------------S----------------------------S--
-------------------------S---------S--------------------------------------------
--------------------------------------------------------------------------S-S---
----------------------------------------------------------------S---------------
-------------S--S-----------------------------S---------------------------------
-----------------------------------S--------S------------------------S----------
------------------------------------------------------------------------S-------
------------S-------------------------------S-----------------------------------
---------------------------------------------S----------------------------------
---------------------------S----------------------------------------------------
--------------S-----------------------------------------------------------------
------------------------------------------------S----S--------------S--S--------
-------------------------------------------------------------------------------S
--------------------------------------------------------------------------------
---------------------------S----------------------------------------------------
-S----------------S----SS-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
S-------------------------------------------------------------------------------
---------------------S--------------------------------S-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------S----------------
----------------------------S---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------S---------
--S-----------------------------------------------------------------------------
-----------------------S---------------------------------------S----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------S---------S--S--S-------S--
-------------------------------------------------------------------S------------
--------S--------------------------------------------------------------S---S----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------S-------------------------------------------------------------------
--------------------------------S-------------------------S---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------SSSSS
-----------------------------SSS----------------------------------------S-------
-------S--------S----------------S-----------------------------SS--------------S
------S------------------------------------------------------------S------------
----------------------------S-S--SSS------------------S-------------------------
S---SS----SSSS-SSSSSSS----------------------------------------S-----------------
-----------------------S------------S------------S----S-----------------S-------
---------------S----------------S---------------------------------S------S------
-SSSS-SSSSSSSSSS---S--------------S------------------------------------S--------
-----------------S-S-SSS-----------------S------------------S-------S-----------
-----------------------------------S---SS----S-----------S----S-----S---S--SSS--
------S--------S----SSS--S----S-S---SS----SSSSSS------------------------SS------
--------S--SS---SS-----------------------------------S--S-----------------------
--SSSS-------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSS
>forward_403
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------AGGTTCACGCGAGGAAA
AGT-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_2241
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CGAAGAGCCCTCAAGAAGCT------------------------------------------------------------
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>forward_794
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------------------------------------------------------ATGGAAAGGTCGTGCTCAGC------
--------------------------------------------------------------------------------
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-------------------
>reverse_2624
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---------------------------------------------------------------AGTTATTGTTTCGTCTG
GTCAGAC-------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------
>forward_1035
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------------------TGCAATCAGATGGTGGAGCTT-----
--------------------------------------------------------------------------------
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-------------------
>reverse_3064
--------------------------------------------------------------------------------
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-----------------------GGTGCAGATTGGTTGAGCAG-------------------------------------
--------------------------------------------------------------------------------
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-------------------
>forward_2624
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--------------------------------------------TGCAGCTGATGTATGACCCA----------------
--------------------------------------------------------------------------------
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>reverse_4565
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----ATACGACGACCCTCTGCATG--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------
