>input_sequence_23593
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------------------------------------------------------------------ATGGCCTTCCTCAG
AACCCTAAACCCTCTCCTCCGTAGGAACCCCGCCCTCCCGAATCCGAGGCCTCTCCTCTCCCACTACACCCTCTCCGCCC
CCTTCCGCGCCGCCGTCCCTCCCGCCCCCTCCCCCTCCCCCTTCGCCGCCGCGGCCGCGGCCGCGCACCCCCGCGTCCTC
GCCCGCTCCCGCAGCGGACCGCTGCTCCCCTCCTCGTCCCCATGGACGCTCCCGCGGTCCGCCACGCCGTTCACCACCGC
CGCCGCTTTCCGCTCGAAGCTCCACAGGGCTCGCGCCATTGCCGGCGGCAGTGCGCAGGCTCTCGCCGACGCGGTGCGGT
GGGAGCCCAAGCGGGTCTACGGAGGCGAGGCTGCGGGTCCGGGTGGAGGTGAGAAGTTTCTGAATCTGCCCAATTTGGTG
TCGATCGGGCGCATGGCGTCGGGGCCGCTCATTGGATGGTGAGTTCTT-ACCTTCATGTGTCACTATGCTGTCGAACCGG
ATGCATTAAGATAGGTGCTTAAGTTTGATGGTTGGACTTCTC-GATCAAAATGCTACTGCTCTGATGTTTACTTAGTACT
GCAT---------------TCAGTACCCACCG-----------------------------------TGTTAATTGAATC
AAATAGGAAGTATGTGCAGGCTTGATGCCATAAATTACCATGCTCTGTTATTTTTCATAGGTGA--CTCCCTGCTTGTGC
ATGGGTACCTCATGAAAAAAATTAGTCTCATGCATACTTGTTGGATTAGCACTCATTTCTGTGCAAACCAGCTATTTAAA
ATTATGTTG--ATGTGTCTGATGATGTAGGTCTGAATGTGTTAGCCTTAAAGGAATCGAATATTCGATGTTATGTATTGT
TGAGGCTTTATGAATGTCTTATAATTGATTGTATTTCAGGTTTTACATTGGCATGACTGACTTGCTTTTGTATTTCATAT
CTTAAGGAACCGAGAACCCGAAATATTTACATTTCATGAGAGAGTGAGAGGTTGCCAGGCTACAAATTGAAACAGGATAT
TAAATACGATGTCTGAACTTGTTAGTTGTCGCCAAGGTTGCGGAGCTTGTAGTCAAAACATGTTAACCAATCATTGAACC
TTTCTTCATGTTCTCTTTGATCATGTAAATGCATGTTTGACCAGGCAGCTTTGAACCATGTCAGACAAAAGATACTGAAA
TGTTTTGTTCTTGTGTCTATGTGACATGACATT-ACATAAAGGGCTGAGTAAACCTATTGTTTGTTCTTCACATTAGAAT
CAGATGTATTGCTTAACCAGCACTGCGTGTCAGTGTCAAATCTGAAGAAGTTGCCAGGCTGTAGGCTTATCATTCCATAC
TTCAACACTGCACCATCCTCCTGTTTGTTTTTGTGTTGTTTCGCTTCATTACAGGAGGTCTGAAATTGTGGTTAATGTCA
AATTAGCTTTTTTGGATGTTCTAACAGTGATTTCGAATTACTCAGTCTCTAGGTATCAGAGCATGCGATTGCTGTCAAAT
AAAGGATGCCCATGTTTGTACTTTGTATATGTTTGATTAATTTGCTGTTTTGGATATTTTGTCTTGCCACATACTCCCTC
CTTCCCAAAATAAGTGTCTCAACTTTAGTACCTTCCCAAAATAAGTGTCTCAACTTTACTAAAGTTGAGACTTATTTTGG
GATGGAGGGAGTAATATTTTAGACATATAGGGCCATGATTATCTATATCTTTCTTATCTATGGTTCTGGTTCTGATGATC
TACATATGCTATGTAGGATGATTATGAATGAATGGTATCTTCCTGCTTTTGGCACATTAGCTTTGTCTGGTGCAAGTGAT
TGGGTAAGATTACACCCTTATAATATTTCAACCATACTAACACCATATGTTAAAAACCTTACTCATCATTTC-TTCTCTG
ACAATAGTTGGATGGTTTTTTAGCAAGAAAGATGGGCATCAATTCTGTCATTGGTTCATATCTGGACCCATTGGCTGACA
AGGTTCAAACTTCAAATCAATATTTATAAACTTTATGTTTCTT--TATAAAATTATATCTGTGTTGTTAAGCTGACCTGC
AGTATCTGTTGTGTTGCTTAGGTGTTGATTTGCTGTGTTGCTGTAGCAATGGTTGAGAAGGAGCTCTTACATCGTGAGTA
GCTCAACACATATTCTCTTCATTTTTGTATCTTTGCTACACAGCTTGCTTGCATCCCTGTGTATAATGTCAATCCCAACC
AGAGACATTGTGTGATACTCTGAATGTCTAAAACCATTCACCAGCTTCATCTAAGAAAAAATACAGTGATGGTGATTGCT
GATAGCTCATTATGTTGTCCTGCTATTCTTGCCCTTAATCGAATAATTTGACGAATCAATCAATGATGTTGCACTTTGAT
TGCTCTGCTTGAAGCTGGCCTTGTTGGCCTGGTGGTTGCAAGAGACTTTCTCCTGGTGGGTGGGGCTTTCTACAAACGAG
CATCCAGCCTGGGATGGAAGGTACCACTTACACAAAATTAGGTATATATTT-----GAAGTGTTTAAATGAATTCTCACC
CTGATTATCCTTGCGCCAGTGGAACAGTTGGTCAGACTTTTGTAACTTAGATGCAATTCAGCGTGAGAAGGTTCAACCTC
TTTTCATCAGCAAGGTATGTCACTATGTTCTCACATTATTTGATCCTGTGGACCTTTGGCACACATGACAATAATTTTTT
AATGCAGGTAAATACAGTATTTCAGTTGATGTTGGTTGCTGGTGCACTCCTTCAGCCAGAATTCGGCACAGAGGAGACTC
AGAATTATATTACATACTTGGGGTAATCTTTTTTTTTTCAAACTT-TTTGTCTGCCCTGGTGTTTGTAGTTTGGTAAAAT
GGTGTTTTTTTATATGAAATTATACTTTTACGTTGAT-CAGTCAAACCACTATTTATCTG---------TCATAACTCAG
AAGCATCTCCTATGTGAAATTTGATAATTTTCAAGAAAATAATACTGAAACAGAAGAATACTTGAACATCAATAAGTGAT
GATTGTAAAAAAAA--AGTTTATATAGAAC----------ATTTTAGATTATTTTGCTTGCAGTGTTTCGTGCTAAATAT
TT-GTTTTATAACTGCAGTTGGCTGGTTGCTACTACAACAATGGCATCCACAGTAGGTTATGGTGTGAAATACTATCAGT
TAAGACCGAGGACATGA---------------------------------------------------------------
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-------------------------------------------------------------------
>chr3D_1_TraesCS3D01G319700
AGAAAAACTACATCTAATCACATGGTAGAGCAGTGGCAGATAATGGGTGCAGATCACCCCACAGTCCAAACAAGGCCAGC
GGCACACAAGGCTTTGCTGTAGCACGAGACGTCTTTAATACCAATCCCTACTAGCTTATTTTGCTTGCAAATCCTTTTCT
AGTTGACTAGGAATTTTCCACGACGAGCGTCCTCATTAGCATTATAGAGAAAATCTCTCCTGATTTTATCCATCTCCCCT
ACAACCCATTTGTTAGTGATGACGCTTGTGAAAAAATGTGTTGTAGTAGAGGTTAGTGTTGAGTTATTCAAAATTAGGCT
CCTAGAATTGTATAAGAGCTTTCATTTCCACCTTTTTAGCTTTCTTGCCATCTCATTAATAATAGGTTGCATTTCAACTC
GTCTCGTCTGCCACGTCAGACTGAAGATGGGGTCCCGCACGAAATCGCCCGAAACCCGGCAGTCCGACGGACGCCTCCTC
TGGTTGGGGGTGTGAACGTCGCGTGGCG----------------TCGAGGCCAACCCGGCCATTTAAGTCGGCCGACGTC
CCTCAA-CCCTAGCCACATCCACCTCCCCCCTCTCTGCGTCGCCAGCCCGAGCCCATCCACCTCTCTCTCGCTCCGTCAC
TCTTCCCACGCCCTCCGGCTTCGTCATGGTTCGGCAAGAGATAACCACGTATGCTATGGTCATGCCGGAGCGCCGGTTTC
AGATTGAGCAAGCGGACGCGCCCAAAAGCGTGCGTGACCATTTGAGGGATCGGATTTGCTGTCCGCGGCTGTAGGTGCTC
TTATGATGGTACAACTCCTTCGAGGGCCGGAGAAGAAGAAGGAGCGTGAAC-------CACAGAGG--GGCCCCACCTAC
CAGCCGCCGCCGCTCCACTCCCCGTCCGTCACCTTCCTCGAGAACACCACCAAGTCCAACCCCAAGCGCAAGAAGCTCTC
CTCCCCCTCCCCAAGGATCCCGACAGACGGCCCCCGACCCCCTCCAATGCCCCACAGTCCACGGACATGGCCTTCCTCAG
AACCCTAAACCCTCTCCTCCGTAGGAACCCCGCCCTCCCGAATCCGAGGCCTCTCCTCTCCCACTACACCCTCTCCGCCC
CCTTCCGCGCCGCCGTCCCTCCCGCCCCCTCCCCCTCCCCCTTCGCCGCCGCGGCCGCGGCCGCGCACCCCCGCGTCCTC
GCCCGCTCCCGCAGCGGACCGCTGCTCCCCTCCTCGTCCCCATGGACGCTCCCGCGGTCCGCCACGCCGTTCACCACCGC
CGCCGCTTTCCGCTCGAAGCTCCACAGGGCTCGCGCCATTGCCGGCGGCAGTGCGCAGGCTCTCGCCGACGCGGTGCGGT
GGGAGCCCAAGCGGGTCTACGGAGGCGAGGCTGCGGGTCCGGGTGGAGGTGAGAAGTTTCTGAATCTGCCCAATTTGGTG
TCGATCGGGCGCATGGCGTCGGGGCCGCTCATTGGATGGTGAGTTCTT-ACCTTCATGTGTCACTATGCTGTCGAACCGG
ATGCATTAAGATAGGTGCTTAAGTTTGATGGTTGGACTTCTC-GATCAAAATGCTACTGCTCTGATGTTTACTTAGTACT
GCAT---------------TCAGTACCCACCG-----------------------------------TGTTAATTGAATC
AAATAGGAAGTATGTGCAGGCTTGATGCCATAAATTACCATGCTCTGTTATTTTTCATAGGTGA--CTCCCTGCTTGTGC
ATGGGTACCTCATGAAAAAAATTAGTCTCATGCATACTTGTTGGATTAGCACTCATTTCTGTGCAAACCAGCTATTTAAA
ATTATGTTG--ATGTGTCTGATGATGTAGGTCTGAATGTGTTAGCCTTAAAGGAATCGAATATTCGATGTTATGTATTGT
TGAGGCTTTATGAATGTCTTATAATTGATTGTATTTCAGGTTTTACATTGGCATGACTGACTTGCTTTTGTATTTCATAT
CTTAAGGAACCGAGAACCCGAAATATTTACATTTCATGAGAGAGTGAGAGGTTGCCAGGCTACAAATTGAAACAGGATAT
TAAATACGATGTCTGAACTTGTTAGTTGTCGCCAAGGTTGCGGAGCTTGTAGTCAAAACATGTTAACCAATCATTGAACC
TTTCTTCATGTTCTCTTTGATCATGTAAATGCATGTTTGACCAGGCAGCTTTGAACCATGTCAGACAAAAGATACTGAAA
TGTTTTGTTCTTGTGTCTATGTGACATGACATT-ACATAAAGGGCTGAGTAAACCTATTGTTTGTTCTTCACATTAGAAT
CAGATGTATTGCTTAACCAGCACTGCGTGTCAGTGTCAAATCTGAAGAAGTTGCCAGGCTGTAGGCTTATCATTCCATAC
TTCAACACTGCACCATCCTCCTGTTTGTTTTTGTGTTGTTTCGCTTCATTACAGGAGGTCTGAAATTGTGGTTAATGTCA
AATTAGCTTTTTTGGATGTTCTAACAGTGATTTCGAATTACTCAGTCTCTAGGTATCAGAGCATGCGATTGCTGTCAAAT
AAAGGATGCCCATGTTTGTACTTTGTATATGTTTGATTAATTTGCTGTTTTGGATATTTTGTCTTGCCACATACTCCCTC
CTTCCCAAAATAAGTGTCTCAACTTTAGTACCTTCCCAAAATAAGTGTCTCAACTTTACTAAAGTTGAGACTTATTTTGG
GATGGAGGGAGTAATATTTTAGACATATAGGGCCATGATTATCTATATCTTTCTTATCTATGGTTCTGGTTCTGATGATC
TACATATGCTATGTAGGATGATTATGAATGAATGGTATCTTCCTGCTTTTGGCACATTAGCTTTGTCTGGTGCAAGTGAT
TGGGTAAGATTACACCCTTATAATATTTCAACCATACTAACACCATATGTTAAAAACCTTACTCATCATTTC-TTCTCTG
ACAATAGTTGGATGGTTTTTTAGCAAGAAAGATGGGCATCAATTCTGTCATTGGTTCATATCTGGACCCATTGGCTGACA
AGGTTCAAACTTCAAATCAATATTTATAAACTTTATGTTTCTT--TATAAAATTATATCTGTGTTGTTAAGCTGACCTGC
AGTATCTGTTGTGTTGCTTAGGTGTTGATTTGCTGTGTTGCTGTAGCAATGGTTGAGAAGGAGCTCTTACATCGTGAGTA
GCTCAACACATATTCTCTTCATTTTTGTATCTTTGCTACACAGCTTGCTTGCATCCCTGTGTATAATGTCAATCCCAACC
AGAGACATTGTGTGATACTCTGAATGTCTAAAACCATTCACCAGCTTCATCTAAGAAAAAATACAGTGATGGTGATTGCT
GATAGCTCATTATGTTGTCCTGCTATTCTTGCCCTTAATCGAATAATTTGACGAATCAATCAATGATGTTGCACTTTGAT
TGCTCTGCTTGAAGCTGGCCTTGTTGGCCTGGTGGTTGCAAGAGACTTTCTCCTGGTGGGTGGGGCTTTCTACAAACGAG
CATCCAGCCTGGGATGGAAGGTACCACTTACACAAAATTAGGTATATATTT-----GAAGTGTTTAAATGAATTCTCACC
CTGATTATCCTTGCGCCAGTGGAACAGTTGGTCAGACTTTTGTAACTTAGATGCAATTCAGCGTGAGAAGGTTCAACCTC
TTTTCATCAGCAAGGTATGTCACTATGTTCTCACATTATTTGATCCTGTGGACCTTTGGCACACATGACAATAATTTTTT
AATGCAGGTAAATACAGTATTTCAGTTGATGTTGGTTGCTGGTGCACTCCTTCAGCCAGAATTCGGCACAGAGGAGACTC
AGAATTATATTACATACTTGGGGTAATCTTTTTTTTTTCAAACTT-TTTGTCTGCCCTGGTGTTTGTAGTTTGGTAAAAT
GGTGTTTTTTTATATGAAATTATACTTTTACGTTGAT-CAGTCAAACCACTATTTATCTG---------TCATAACTCAG
AAGCATCTCCTATGTGAAATTTGATAATTTTCAAGAAAATAATACTGAAACAGAAGAATACTTGAACATCAATAAGTGAT
GATTGTAAAAAAAA--AGTTTATATAGAAC----------ATTTTAGATTATTTTGCTTGCAGTGTTTCGTGCTAAATAT
TT-GTTTTATAACTGCAGTTGGCTGGTTGCTACTACAACAATGGCATCCACAGTAGGTTATGGTGTGAAATACTATCAGT
TAAGACCGAGGACATGATGACAGCTGTTGCCTGCATTTTTGTTAAATACCAGCCAGATTACGATTGGTGAATCCAGCAAT
TAGTGGTGA-AACTCGATTGTTTCCATGGACCATCCAAATTTGAAGAAATGGAAGGGTTGTGCAGTTTCTGAAAATGAAA
GCTGCAGATGTTTGCTGTATTAGGACCTCTCCCA-----AGTAGCCATTAGTCTAGTTCCTAACATATGG-AGCCATTGA
CTAGAATATAAAGCTGTAGAATTTGTTGTATTTT----------------------------------------------
--------------------------------TTTCCCCTTAAGAATGGTTATCAAATTACTGGAGGGCAAACCGCATGC
CAGTGTACATATTCTTGCAGCTCTGTACTAAG-------------------------GTTGAGTACAGACTAGAGAGGTT
GGCTAGTCTTGAGACGTCAGCGGTTGAAGTCTACAAATTCTCTCATATTCCAAAGGATTTAGTTGAGTC-------GTTT
TAACCCCTGCAAACGGTGAAATGTATAAACTCATATTTTC-----TATGTCCCTGTATTGTACT-----TGCGGGT----
--------------------------------------------------------------------------------
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----------------------------------------------------------TAAAATGT--------------
-----------------------------------AGTAGTGGATAGATCCAGTTGAACCAGCTGATTACTGGTCGAAAT
----------AAGGCATTATTTGCTTCTTAAGCTTTGTTCCTAGAATCAAGTCGGGCTGGGGCG-AGCAAGTTGGAAGCA
CAAAATGAGCGCCTGCCAGTCATAACCATTTTTCGATACTCAAGTTGAGTTCATTCTCATCGATGGGTTCAATAAACGAG
CCATAGTTCGTGGCAGGAGGATATGTTATTTCTATCGGAGTTGCTATGGGTTACTCCCTTCGTTTCCCTTCGTTTCACAA
TATAGTGCATATGA-TTTTTAGAAAATCAAACCTCACAAACTTTGACCAAATTTGTAGAGAAAAACATCTAGGTTGCCAA
AATACATCTCATTAGATTCAACATAAGATGTAGTTTCATATTATACATATTTGATATTGTAGATATAAATAGTTTTCTGT
ATAAACTTGGTCAAAGTTTGTAAAGTTTGACTTAAAAAAAAAATCCATATGCACTATATTATGAAGC
>chr3B_1
AGAAAAACTCCATCTAATCACATGGTAGAGCAGTGGCAAATAATGGGTGCAGATCATCCCATAGTCCAAACAAGGCTAGC
GACACACAAGGCTTTGTTGTAGCATGAGACGTGTTTAATACTAATCCCTACTAGCTTCTTTTGCTTGCAAATCCTTTTCC
AGTTGACTAGGAATTTTCCACGACGAGCGTCCT---TAGCATTATAGAGAAAGTCTCTCCTAATTTTATCCATCTCCCCT
ACAACCCATTTGTTAGTGATGACGCTTGTGAAAAAATGTGTTGTAGTAGAGGTTAGTGTTGAATTATTCAAAAT-AGGCC
CCTAGAATTGTATAAGAGCTTCCATTTCCACCCTTTTAGCTTTCTTGCCATCTCATTAATAATAGGTTGCATTTCAATTC
GTCTCGTCCACCACGTCAGACTGACGACTAGGTCCCACCCGAAATCGCCCGAAACCTGGTGGTTCGACAGACGTCTCCTC
CGGTAGGGGGTGTGAACGCCGCGTGCCGCCGCTTCGCTCGACGCTTGATGCCAATCAGGCTATTTAGGTCAGAAGACATC
CCCCCCCCCCAAGCCACATCCACCTCCCCC--CTCTGCGTCGCCAGCCCGAGTCCATCCACCTCTCTCCCGCTCCGTCGC
TCTTCCCACGCCCTTCGGTTTCGTCATGGTTCGACAAAAGATAACCACGTATGTTATGCTAATGCCGGAGCGCCGGTTTC
AGATTGAGCAGGCGGA-GCGCCCGAAAGTGTACGTGACAATTTGAAGGATCGAATTTGATGTGCGCCGCTATAGATGCTT
TTACAACGGTACACCTCCTTAAGGGCT----GGAGAAGAAGGAGCGTGTACGGTGTACCACAGACGGCGGCCCCACCTAC
CAGCCGCCGCCGCTCCACTCCCG----GTCATCTTCCTCGAGAACACCACCAAGTCCAACCCCAAGTGCAAGAAGCTCTC
CTCCCCCTCCCCAAGGATCCCGAAAGACTGCCCGAGCCCCCCTCCAATGCTCCACGGTCCACGGACATGGCCTTCCTCAG
AACCCTAAACCCTCTCCTCCGTAGGAACCCCGCCCACCTGAATCCGAAGCCTCTCCTCTCCCACTACACCCTCTCCGCCC
CCTTCCGCGCCGCCGTCCCTCCCGCCCCCTCCCCCT------TCGCCGCCGCGGCCGCGGCCGCGCACCCCCGCGTCCTC
GCCCGCCCCCGCAGCGGACCGCTGCTTCCCTCCTCTTCCCCATGGGCTCTCTCGCGGTCCGCCACGCCGTTCACAACCGC
CGCCGCTTTCCGCTCGAAGCTCCACAGGGCTCGCGCCATTGCCGGCGGAGGTGCGCAGGTTCTCGCGGACGCGGTGCGGT
GGGAGCCCAAGCGGGTCTACGGAGGCGAGGCTGCGGGTGCGGGTGGAGGCGAGAAGTTTCTGAATCTGCCCAATTTGGTG
TCGATCGGGCGCATGGCGTCGGGGCCGCTCATTGGATGGTGAGTTCTTTACCTTCAGGTGTCACTATGCTGTCGAACCGG
ATGCATTAACATAGGTGCTTAAGTTTGATGGTTGGATTTCTC-GATCAGAATGCCACTGCTCTGATGTTTACTTGATACT
GCAT---------------TCAGTACTCACCGTGTTAATACATAGTTCAGATTTGCTAATC-AGGCATGTTAATTGAATC
GAATAGGAAGTGTGTGCAGGCTTGATGCCATAAATCACCATGCTCTGTTATTTTTCATAGGTGA--CTG--CGCTTGTGC
ACGGGTACCTCATGAAAAAAATCAGTCTCATGCATACTTGTTGGATTAGCACTCATTTCTGTGCAAACCAGCTATTTAAA
ATTATGTTGCTGCACATCTGACGATGTAGATCTGAATGTGGTAGCCTAAAAGGAATCAAATATCTGATGCTATGTATTGT
TGAGGCCTTATGTATGTCTTAGAATCAATTGTATTTCAAGTTTTACATAGGCATAGCTGATTTGCTTTTGTATGCCATAT
CTTACGGAACCGAGAACTCGAAATATTTACATTTCAG--GAGAGCGAGAGGCTGCCAGGCTACAAATTGAGTCATGATAT
TATATACGACGTGTGAACTTGTTAGTTGTCACCAAGGTTGTGGGGCCTGTAGTCAAAACATGTTAACCAATCATTGAACC
TTTCGTCATGTTCTCTTTGGTCATGTAAATACATGTTTGACCAGTCAGCTTTGAACCATGTTAGACAAAAGACACTGAAA
TGTTTTGTTCTTGTGTCTATGTGACATGATATA-ACATAAAGGGCTGAGTAAACCTATTGTTTGTTCTTCACATTAGAAT
CAGATGCACTGCTTAACCAGCAATGATTGTCAGTGTCAAATCTGAAGAAGTTGCCAGGCCGTAGGCGTATTGTTCTATAC
TTCAACAGTGCACTATCCTCCTGTTAGTTTTTGTGTTGTTTTGCTTCATTACAGGAGGTCTAAAATTGGGGTTAATGTCT
AATTAGCTTTTTTGGATGTTCTAACAGTGATTTCGAATTATTCGGTCTCTAGGTATCAGAGCATGCAATTGCTGTCAAAT
AAAGGATGCCCATGTTTGTACTTTGTATATG-TTGATTAATTTTCGGTTTTGGATATGTTGTCTTGCCACA---------
--------------------------------------------------------------------------------
-----------TAATATTTTAGACATATAGGGCCATGATTATATATATCTTTCTTATCCATGGTTCTGGTTCTGATTATT
TACATATGCTATGTAGGATGATTATGAATGAATGGTATCTTCCTGCTTTTGGCACATTAGCTTTGTCTGGTGCAAGTGAT
TGGGTAGGATTACACCCTTCTAATATTTCGACCATACTAACACCATATGTTAAAAACCTCACTCATCATTTC-T-CTCTG
ACAATAGTTGGATGGTTTTTTAGCAAGAAAGATGGGCATCAATTCTGTAATTGGTTCATATCTGGACCCATTGGCTGACA
AGGTTCAAACTTCAAATCCATATTTATAAACTTTATGTTTCTT--TATAAAATTATATCTGTGCTGTTAAGCTGACCTGC
GGTATTTGTTGTGTTGCTTAGGTGTTGATTTGCTGTGTTGCTGTAGCAATGGTTGAGAAGGAGCTCTTACATCGTGAGTA
GCTCAGCACATATTCTCTTCATTTTTCTATCTTTGCTACACAGCTTGCTTGCATCCCCGTGTATAATGTCAATCCCAACC
AGAGACATTGTGCGATACTCTGAATGTCTAAAACCATTCACCAGCTTCATCTAAGTAAAAATACAGTGATGATGATTGCT
GATAGATCATTATGTTGTCCTGCTATTCTTGCCCTTAACTGAATAATTTGACGAATCAATCAATGATGTTGCACTTTGAT
TGCTCTGCTTGAAGCTGGCCTTGTTGGCCTGGTGGTTGCAAGAGACTTTCTCCTGGTGGGTGGGGCTTTCTACAAACGAG
CATCCAGCCTAGGATGGAAGGTACTACTTGCACAAAATTAGGTATATATTTGATTTGAAGTGTTTAAATGAATTCT-ACC
CTGATTATCCTCGCGCCAGTGGAACAGTTGGTCAGACTTTTGTAACTTAGATGCAATTCAGCGTGAGAAGGTTCAACCTC
TTTTCATCAGCAAGGTATGTCACTATGTTCTCACATTATTTGATCCTGTGGACCTTTGACACATATGACAATAATTTTTT
AATGCAGGTAAATACAGTATTTCAGTTGATGTTGGTTGCTGGTGCACTCCTTCAGCCAGAATTCGGCACAGAGGAGACTC
AGAATTATATTACATACTTGGGGTAATCTGTTTTTCAAAC----T-TTTGTCTGCCCTGGTATTTGTAGTTTGGTAAAAT
GT--TTTTTTTCAATGAAATTATACTTTTATGTTGCACCAGTCAAACCACTATTTATATCAGTCATAACTCATAACCCAG
AAGCATCTCCTATGTGAATTTGATAA--TTTCAGGAAAATAATACCAAAACAGAAGAATACTCGAACATCAATAAGTGAT
GATTGTTAAAAAACATAGTTTATATAAAATATTATAGAGTATTG----------TGCTTGCAGTGTTTCATGCTAAATAT
TT-GTTTTATAACTGCAGTTGGCTGGTTGCTACTACAACAATGGCATCCACAGTAGGTTATGGTGTGAAATACTATCAGT
TAAGACCGAGGACATGATGACAGCTGTTGCCTGCATTTTTGTTAAATACCAACCAGATTACGATTGGTGAATCCAGCAAT
TAGTTGTGAGAACTCAATTGTTTCCATGGACCATCCAAATTTGAAGAAATGGAAGGGTAGTGCAGTTTCTAAAAAT-ATA
GCAGCAGATGTTTGATATACT------------------AGTAGCCATTAGTCTAGTTCCTTACACATGG-GGCCACTGA
CTAGAATATAAAGCTGTAGAATTTGTTGTATTTTATCCCGCAAAAAAAAAGAATTTGTTGTTGTTGTTGTTGTTGTTGTT
GTTGTTGTTGTTGTTGTTTTTGTTTTTTGTTTTTG---CTTAAGAATGGTTATCAAATGAATGGAGGGCAAACCGTATGC
CATTGTACATATTCTTGCAGCTCTGTACTAATTCTAATAGAATCAGGCCGTTTGGAGGTTGAGT--AGACTGCAGAGGTT
GGCTAGTCTTGAGGGTTGGCTAG-------------------TCATATTCCAAAGGATTTAGTTGAATCGTTTTAAGTTT
TAACCCCTGCAAATGGTGAAATGTATTTTACTCGCAGGTTAAAGCCTCCTTTGGTTCAGAGGAATTTTGCAGGAATTTCA
TAGGATATGATTTCTATGGGGAAAATTCCTTCAGAGCCCTTTGGTTTCCTATGAAGGAATTCTTCTATCCTTTACATTTC
ATAGAAAAAATAAACATTAGCCTAGACTCGATGAAAAAAAAATCCTATGATGTGAACCAAAGAACATCTTTTTTCTTTTC
GTATTCATAAGATTTGAGATGCATGTCATCTAATTTCCTATGATTTTTCTATTCCTATAATTTTTCTACCCATGAACCAA
TTGAGACCTAAAATGTAGTACTCCCTCGAATTCAACAAAGTTGTACTAAAGCTGCCAATTAATTTGGATCGGACTGTCCC
AAATTATAAGACGTTTTGGGTAGGCT----------------------------------------------ATCGAAAT
CGAGTGGATCAAGGCATTAT---CTTCTTTAGCTTTGTTCCTAGAATCAAGTCAGGCTGGGGCAAAGCCAGTTGGAAGCA
CAAAATGAGTGCTTGCCAGTCATAACCATTTTTGGATATTCAGGTTGAGTTCAATCTCGTCGATGGGTTCAATAAACGAG
CCATAGTTCGTGGGAGGAGGATATGTTATTTCTGTTGGATTTGCTATG--------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------
>chr3A_807
--------------------------------------------------------------------------------
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----------------------GGGCC----GGAGAAGAAAGAGCGTGTAG-------CACGGACGGCGGCCCCACCAAC
CAGCCGCCGC---TCCACTCCCCGTCCGTCACCGTCACCTTCCTCGAG---------AACCCCAAGCGCAAGAAGCTCTC
CTCCCCCTCACCAGGGATCCCAACAGACGGCCCGAG-CCCCCTCCAATGCTCCACAGTCCACGGACATGGCCTTCCTCAG
AACCCTAAACCCCCTCCTCCGCAGGAACCCCGCCCTCCCGAATCCGAGGCCTCTCTTCTCCCACTACACGCTCTCCGCCC
CCTTCCGCGCCGCCGCCCCTCCCGCCCCCGCCCCCT------TCGCCGCCGCGGCCGCGGCCGCGCACCCCCGCGTCCTC
GGCCGCCCCCGCAGCGGGCCGCTGCTCCCCTCCTCGTCCCCATGGGCGCTCTCGCGGTCCGCCACGCCGTTCACCACCGC
CGCCGCTTTCCGCTCGAAGCTCCACAGGGCTCGCGCCATTGCCGGCGGCGGTGCGCAGGCTCTCGCGGACGCGGTGCGGT
GGGAGCCCAAGCGGGTCTACGGAGGCGAGGCTGCGGGTCCGGGTGGAGGCGAGAAGTTTCTGAATCTGCCCAATTTGGTG
TCGATCGGGCGCATGGCGTCGGGTCCGCTCATTGGATGGTGAGTTCTT-ACCTTCAGGTGTCACTATGCTATCGGACTGG
ATGCACTGATATAACTGCTTAAGTTTGATGGTTGGACTCCGTTGATCAAAATGATACTCCTCTGGTGTTTACTTAGTACT
GCATTCAGTAGAACTGTCCTCAGTACTCACCTTGTCAATAGTTAGTTAATTTCGACTTTTCGAGGCATGCCAGTTAAATC
GAATCAGAAATGTGTGCAGGTTTTAGGCCATACATTACCATGCCCTGTTATTTTTCATAGATAGTTCTG--TGCTCGTGC
ATGAGTACCTCATG-AAAAAATTAGTCTCATGCATACTTGTTGGATTAGCAATTATTTCTGCCCAGACCAGCTATTTAAA
ATTATGTCGCTATGTGTCTGATGATGTAGGTCCGAATGTGTTAGCCTTAAAGGAATCGAATATTTGATGCTATGTATTGT
TGAGGCTTTATGCATGTCTTACAATTGATTGTATTTCAAGTTTTACATAGGCATGGCTGAGTTGCTTTTGTATGTCAAAT
CTTAAGGAACCGAGAACCCGAAATATTTACATTTCGGAACAGAAGGAGAGGCTGCCAGGCTACAAATTGAGACAGGATAT
TAAATACGATGTGTGAAATTGTTAGTTGTCACCAAGGTTGCGGAGCTTGTAGTCAAAACATGTTAACCAATCATTGAACC
TTTCTTCATGTTCTCTTTGGTCATGTAAATACATGTTTGACCAGGCAGCTTTGAACCATGTCAGACAAAAGATACTGAAA
TGTTTTGTTC-TGTGTCTATGTGACATGACATTTACATAAAGGGCTGAGTAAACCTTTTGTTTGTTCTTCACATTAGAAT
CAGATGTATTGCTTAACCAGCACTGCGTGTCAGTGTCAAATCTGAAGAAGTTGCCAGGCTGTAGGCTTATCATTCCATAC
TTCAACAGTGCACCATCCTCCTCTTAGTTTTTGTGTTGTTTTGCTTCATCACAGGAGGTCTAAAATTGGGGTTAATGTCT
AATTAGCTTTTTTGGATGTTCTAACAGTGTTTTCGAATTATTCAGTCTCTAGGTATCAGAGCATGCAATTGCTGTCAAAT
AAAGTA-------------------TATATGTTTGATTAATTTGCGGTTTTGGATATGTTGTCTTGCCACA---------
--------------------------------------------------------------------------------
-----------TAATATTTTAGACATATAGGGCCATGATTATATATATTTTTCCTATCTACGGTTCTGGTTCTGATTATC
TACATATGCTATGTAGGATGATTATGAATGAATGGTATCTTCCTGCTTTTGGCACATTAGCTTTGTCTGGTGCAAGTGAT
TGGGTAAGATTACACCCTTCTAATATTTTTACCATACTAACACCGTATGTTAAAAACCTTACTCATCATTTATT-CTCTG
ACAATAGTTGGATGGTTTTTTAGCAAGAAAGATGGGCATCAATTCTGTAATTGGTTCATATCTGGACCCATTGGCTGACA
AGGTTCAAACTTCAAATCAATATTTATAAACTTTATGTTTCTTTATATAAAATTATATGTGTGCTGTTAAGCTGACCTGC
AGTATTTGTTGTGTTGCTTAGGTGTTGATTTGCTGTGTTGCTGTAGCAATGGTTGAGAGGGAGCTCTTACATCGTGAGTA
GCTCAACACATATTCTCTTCATTTTTGTATCTTTGCTACACAGCTTCCTTGCATCCCCGTGTATAATGTCAATCCCAACC
AGAGACATTGTGTGATACTCTGAATGTCTAAAACCATTCACCAGCTTCATCTAAGTAAAAATACAGTGATGGTGATTGCT
GATAGCTCATTATATTGTCCTGCTATTCTTGCCCTTAACTGAATAATTTGACAAATCAATCACTGTTGTTGCACTTTGAT
TGCTCTGCTTGAAGCTGGCCTTGTTGGCCTGGTGGTTGCAAGAGACTTTCTCCTGGTGGGTGGGGCTTTCTACAAACGAG
CATCCAGCCTGGGATGGAAGGTACTACTTACACAAAATTAGGTATATATTT-----GAAGTGTTCAAATGAATACTCACC
CCGATTATCCTCGCGCCAGTGGAATAGTTGGTCAGACTTTTGTAATTTGGATGCAATTCAGCGTGAGAAGGTTCAACCTC
TTTTCATCAGCAAGGTATGTCACTATGTTCTCACATTATTTGATCCTGTGGAGCTTTGACACACATGACAATAATTTTTT
AATGCAGGTAAATACAGTATTTCAGTTGATGTTGGTTGCTGGCGCACTCCTTCAGCCAGAATTCGGCACAGAGGAGACTC
GGAATTATATTACATACTTGGGGTAATCTTTTTTTCAAAC----TTTTTGTCTGCCCTGGTGTTTGTAGTTTGGTGAAAT
GGTG-TTTTTTATATGAAATTATACTTATACGTTGAACCAGTCAAACCACTATTTATCTG---------TCATAACTCAG
AAGCATCTCCTATGTGAATTTGATAA--TTTCAAGAAAATAATACCGAAACAGAAGAATACTTGAACATCAATAATTGAT
GATTGTAAAAAAACATAGTTTATATAAAAC----------ATTG----------TGCTTGCAGTGTTTCTTGCTAAATAT
TTTGTTTTGTAACTGCAGTTGGCTGGTTGCTACTACTACAATGGCATCCACAGTAGGTTATGGTGTGAAATACTATCAGT
TAAGACCGAGGACATGATGACAGCTGTTGCCTGCATTTTTGTTAATTACCAGCCAGATTACGATTGGTGAATCCAGCAAT
TAGTTGTGA-AACTCAATTGTTTCCATGGACCATCCAAATTTGAAGAAATGGAAGGGTTGTGCAGTTTCTAAAAATGAAA
GCTGCAGATGTTTGCTGTATTAGGACCTCTCCCA-----AGTAGCCATTAGTCTAGTTCCTTACACATGG-GGTCACTGA
CTAGAATATAAAGCTGTAGAATTTGTTGTATTTT----------------------------------------------
--------------------------------TTG---CTTAAGAATGGTCAGCAAATTACTGGTGGGCAAACCGCATGC
CAGTGTACATATTCTTGCAGCTCTGTACTAAT-------------------------GTTGAGTACAGACTAGAGAGGTT
GGCTAGTCTTGAGACGTCAGCGGTTGAAGTCTACAAATTCTCTCATATTCCAAAGGATTTAGTTGAGTC-------GTTT
TAACCCCTGCAAACGGTGAAATGTATAAACTC--ATTTTC-----TATGTCCCTGTATTGTACTGTACTCGCCGGG----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------TCAAAATGC-------------
-----------------------------------AGTAGTGGATAGATCCGGTTGAACCAGCTGATTACTGGTCCAAAT
CGAGTGGATCAAGGCATTATTTGCTTCTTAAGCTTTGTTCCTAGAATCATGTCGGGCTGGGGCG-AGCAAGTTGGAAGC-
CAAAATGAGCGCCTGCCAGTCATAACCATTTTTCGATACTCAAGTTGAGTTCATTCTCATCGATGGGTTCAATAAACGAG
CCATAGTTCGTGGGAGGAGGATATGTTATTTCTATCGGAGTTGCTATGGGTTACTTCTTC----------CGTTTCACAA
TGTAGTGCATATGGTTTTTTAGAAAGTCAAACCACACAAACTTTGACCAAATTTTGTA----------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------
>chr3B_4202
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----------------------------------------------------------------------------CAAT
TAGTTGTGA-GACTCAATTGTTTCCATGGACCATCCAAATTTGAACAAATGGAAGGGTAGTGAAGTTTCTAATAATGAAA
GCAGCAGATGTTTGCTATATTAGGACCTCTCCCAAGTACAGTAGCCATTAGTCTAGTTCCCTTGCACTTGTAGCCACTGA
CTAGAATATAAAGCTGTAGAATTTGTTGTATTTTCG--------------------------------------------
----------------------------------G---CTTAAGATTGGTTAGGAAATTACTGGTGAGCAAGCTGCATGC
TAGTGTGCATATTTTTGCAGCTCTGTACTAATTCTAAGAGAATCAGGCCGTTTGGAGGTTGAGTAGAGACTACAGACGTC
GGCTAGTCTTGAGACGTCAACGGTTGAGGTCTACAAATTCTCGCATATTCCAAAGCATTTAGTTGAATC-------GTTT
TAACCCCTGCAAAGGGTGAATTGTATACACTC--ATATTTACTAGTATGCCCCTGCATTGTACT-----CGCGGGG----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------TTAAAATGTACCACTCTGTACC
AAAATATAAGACGTCGTATAATTTGGGACAAATAAAGTAGTGAATAGATCCAGCTGCT---GCTGATTATTGATCGACAT
CGAGTGGATCAATCCATTATTTGCTTCTTAAGCTTTGTTC-TAGAATCTAGTCGGGCTGGGGCG-AGCAAGTTGGAAGCA
CAAAATGAGCGCCTACCAGTCATAACCATTTTCCGATACTC---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------
>SNPs
---------S----------------------------S-----------------S----S--------------S---
-S--------------S-------S-------S--------S---------------S---------------------S
---------------------------------SSS----------------S--------S------------------
--------------------------------------------------------------S-----------S----S
---------------------S----------S--------------------------------------------S--
--------SS--------------S--SSS------S-S-----------------S--SS--S----S----S------
S---S-------------S------S-------------------S--S-----S-S---S-----S---S-SS---S--
--S-SS----S-------------------SS--------------------S---------------S---------S-
--------------S---S--------------S---S---------------S----S-S-------------------
----------S-----S------S----S--S------S------S------S-----S---S---S---S---S----S
---SS-S------S------SSS--S-SSSS-S---------------S---------------S---------------
--------------------------------------------------------------------------------
---------------------------------SS-S-------------S-----------------------------
--------------------------------------------------------------------------------
------------------------------------SSSSSS--------------------------------------
------S--------------------------------------S-----S----------------------------
-------------------------------------------------S----------------S-------------
-------------------------------------------------S------------------------------
--------------------------------------------------------S-----------------------
---------S----------------------------------------------------------------------
--------------------------S-----------------------------------------------------
S----------S--------------------------------------------------------SSS---------
--------------------------------------------------------------------------------
----------------------------------------------------------------S----S----------
------------S--------S----------------S---------S------S----S------------S------
------------------------------------SS------S------S------------------S---------
------------S-----------------S-------------------------------------------------
-------------------S----------S-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------S-----------------S---------------S-------------------S------S----------S
----------------------------------------S-------------------------S-------------
---------------------------------------------S-----------S-------------SSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSS-------------------------------S---------------------------------S---
--------------------------------------------------------------------------------
-------------------S---------S--------------------------------------------S-----
------------------------------------------------S-------------------------------
---------------------------------------------------------------S----------------
-----S--------------------------------------------------------------------------
---------------------------------------------------------S----------------------
-------------------------------------------------------S------------------------
--------------------------------------SS----------------------------------------
--------------------------------------------------------------------------------
------------------------S-------------------------------------------------------
-----------S--------------------------------------------------------------------
----------------------------------------------------------S---------------------
--------------------------------------------------------------------------------
-----------------------------------SSSSSSSSS------------------------------------
------------------------------------S-------------------------------------------
------------------S--SSSS-SS-----------------S----------------------------------
-------------S------------S----------------SSSSSSSSSSS---------------S----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----S----------S------------------------------------------------------S---------
-------------------------------------------------------------S---S----------S---
--------------------------------------------------------------------------------
----------------------------------SSSS------------------------------------------
-------------------------------S------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------SS-----------------------------------S----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------S----SS--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------S-----------------------------------------S-S-SSSSSSSSSSS----------
-S-----------S-----------S-------S--------------------SSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_865
--------------------------------------------------------------------------------
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---------------------------------------------AAGGAGCGTGAACCACAGAG---------------
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>reverse_2045
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--------------------------------------------TGAGAGGTTGCCAGGCTACA----------------
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>forward_1246
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----------------------------CCTCCTCGTCCCCATGGA----------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------
>reverse_2191
--------------------------------------------------------------------------------
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------------------------------GCATGTTTGACCAGGCAGC-------------------------------
--------------------------------------------------------------------------------
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>forward_1530
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---------------------------------------------------------------------TGTCGAACCGG
ATGCATTAAG----------------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_2408
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-------CTGCACCATCCTCCTGTTTG-----------------------------------------------------
--------------------------------------------------------------------------------
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>forward_2071
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-------------------------------------------------GGTTGCCAGGCTACAAATTGAA---------
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>reverse_3882
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-----------------------------------------ACTTTTTGTCTGCCCTGGTGT------------------
--------------------------------------------------------------------------------
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>forward_2645
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-----------------------------------------------------------------GCCACATACTCCCTC
CTTCC---------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_4134
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-----------------------------------------------------TTGCTTGCAGTGTTTCGTGC-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------
>forward_3545
--------------------------------------------------------------------------------
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-----AGCCTGGGATGGAAGGTACC-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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>reverse_5496
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------CCCTTCGTTTCCCTTCGTTTC----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------
