>input_sequence_87547
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------------------------------------------------ATGGAAGCACTGGTTTATACGTTCCTTTTATT
TTCGACTTTAGGGATAAT-TTTTTTCGCTATCTTCATCCGAGAACCACCTAAGGTTCCACCAACTCCAATTAAAAGAATA
AAATAA--------------------------------------------------------------------------
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>chr7A_1_TraesCS7A01G289900
ATATGGGCAATATTGAAACTGTACTTTCTAGTAATATCGCTG-----TTGTTTTTTTGCAGCTTTCGTAGTGGCTAGAAC
TATGTGGTATGGGTCAGCAACGACCCCCGTCGAATTATTTGGGCCTACTCGTTATCAGTGGGATCAGGGATACTTCCAGC
CAGAAATATATCGAAGAGTTAGCAATGGTTTAGCCGAAAATCTTAGTCTATCAGAAGCTTGGTCTAATATTCCCGTAAAA
TTAGCCTTTTATAATTATATTGGTAATAATCGGGCAAAAGGGGGATTATTCAGGGCAGGCTCTATGGACAATAGGGATGG
AATAGCTGTTGGATGGTTAGGACATCCTGTCTTTAGAGATAAAGAAGGACGTGAGCTTTTTGTACGTCGTATGCCTACTT
TTTT-AAAAACATTTCCCATTGTTTTGGTAGATGAGGAGGGAATTGTTAGAGCAGACATTCCTTTTAGAAGAGCGGAATC
CAAATATAGTGTTGAACAAGTAGGAGTAAAGGTGGAGTTCTTTTGTGGCGAACTTAATGGAGTAAGTTATTCTGATCCTG
CTATTGTAGAAAAA-TATGCGAGGCATTCTCAATTAGTGGAAATTTTTGAATCAGACCGGGCTACATTGAAATCTCATGG
TGTTTTTCGCAGTAGTCCAAGGGGTTGGTTCACTTTTGGTCATGCTACCTTTGCTTTGCCCTTCTTTTTCGGACACAATT
GGCATGGCACTAGAACATTGTTCCGAGATGTTTTTGTTGGTATTGATCCAGATTTGGATGCTCAAGTGGAATTTGGAACA
TTCCAAAAAGTGGGAGATCCAACTACAAGGAAACAGGTAGTCTGATACACATTGTTATAGTATCTTTCACCTCTCTTTTT
TGATTTGACATGGGAAACATCTCCCATACTTTCTTTGACTCTTTTTCTTTCTTTATATGGGAAATTATCCCTAATGACAA
ATGAATAGGTGTGGAAGTTATAATTGTAAATAAACCAG-ATCGAATATATGGAAGCACTGGTTTATACGTTCCTTTTATT
TTCGACTTTAGGGATAAT-TTTTTTCGCTATCTTCATCCGAGAACCACCTAAGGTTCCACCAACTCCAATTAAAAGAATA
AAATAATTTCATTTAATTAAGAAGTCTCCCAGATAGGGGGACTTCTTACTTAAATTAGTGTCTGTGTTCTTCGAATGGAT
CTCTTAATTGTTGAGAGGGTTTCCCAAACACGGTATATAAGGCATACCCAGTAATGTTTACAAGTAAACCAGATGTGGAG
ATGGCGACTGAAGTTGATGTTTCCATTTTTATAGAATTTCAAGATTACAATGGATCTACGAAAAGATCGTGTATTTACAA
CTACAACGGAATAGTATACAAAGTCAACACCAATGATTAAATATAATTTATGGCTACACAAACCATTGAAGATAGTTCTA
AACCTAGGCCAAAACAAACTGATGCAGGTAGTTTACTGAAACCATTGAATTCAGAATATGGAAAAGTCGCCCCTGGTTGG
GG-ACTACTCCTTTTATGCGGGTCGCAATGGCTTTATTTGCTATATTCCTATCTATCATTTTAGAAATTTATAATTATTC
CATTTTACTTGACGGAATTTTAACCAATTAGGTTTCTACTAACTAAAACTCGAAAGTCAGAGTTTTTCCATCCAAAAAAG
CCTTTCTAGTTTAAGATCTACATTTCTAGATATTATGGTAGTTCGACCGCGG-AATTTTTTTGTTTCGGTATCTCTGGAA
TATGAGTGTGTGACTTGTTAGAATTGATCCTATTGATAATACATAGAAAGGGCCTGTTATCTCTATCAAGATGATTCTAA
TTCATCAGATATTATTTATTCTAGTATCTGGAGCACGAAATAGATAAAGTGGATCAAAACAAATGGAACTATGATTCATA
CTCACTATTAAGACCTTGCGACCAGACTGAAAAATTCAAGTAGTTCTTAAATAAAAATAGAAAATAAATTTTCTTCCTTC
CAATTTTGTTTGCCCAAAAGACAAC-TTTTCTCTCTCTATTTTGTCGAGTCATTACACTGATTCAATAAATGATTATCAA
GCGGTTCTTATTCGAAGAACCCTT-GCCTTTTCTTTAGCTTGAGATGAAA
>chr1D_2
-TATGGGCAATATTGAAACTGTACTTTCCAGTAGTATCGCTGCTGTT---TTTTTTTGCAGCTTTCGTAGTTGCTGGAAC
TATGTGGTATGGGTCAGCAACGACCCCAATCGAATTATTTGGGCCTACTCGTTATCAGTGGGATCAGGGATACTTTCAGC
AAGAAATATATCGAAGAGTTAGCAATGGTTTAGCCGAAAATCTTAGTTTATCAGAAGCTTGGTCTAAAATTCCCAAAAAA
TTAGCCTTTTATGATTATATTGGTAATAATCCGGCAAAAGGGGGATTATTCAGAGCAAGATCAATGGACAATGGGGATGG
AATAACTGTTGGATGGTTAGGACATCCCGTCTTTAGAGATAAAGAAGGACATGAGCTTTTTGTACGTCGTATGCCTACTT
TTTTTTGAAACATTTCCGGTTGTTTTGGTAGATGAGGAGGGAATTGTTAGAGTAGACGTTCCTTTTAGAAGAGCAGAATC
CAAATATAGTGTTGAACAAGTAGGAGTAACGGTGGAGTTCTATGGTGGCGAACTTAATGGAGTAAGTTATTCTGATCCTG
CTACTGTAAAAAAA-TATGCGAGGCGTTCTCAATTAGGGGAAATTTTTGAATTAGACCGGGCTACTTTGAAATCTGATGG
TGTTTTTCGCAGCAGTCCAAGGGGTTGGTTCACTTTTGGACATGCTACCTTTGCTTTGCTCTTCTTTTTCGGACACATTT
GGCATGGCGCTAGAACGTTGTTCCGAGATGTTTTTGCTGGTATTCATCCAGATTTGGATGCTCAAGTGGAATTTGGAACA
TTCCAAAAAGTGGGAGATCCAACTACAAGGAAACAGGCAGTCTGATACACATTGTTATAGTATCTTTCACCTCTCTTTTT
TGATTTGACATGGGAAACATCTCCCATCCTTTCTTTGACTCTTTTTCTTTCTTTATATGGGAAATTCTCCCAAATGACAA
ATGAATAGGTGTGGAAGTTATAATTGTAAATAAACCAGGATCGAATCTATGGAAGCATTGGTTTATACGTTCCTTTTAGT
TTCGACTTTAGGGATAA-TTTTTTTCGCTATCTTCTTCCGAGAACCACCTAAGGTTCCACTAACTCCAACTAAAAGAATA
AAATAATTTCATTTAAGTAAGAAGTCCCCCTATCTGGGAGACTTCTTACTTAAATTAGTCTCCGTGTTCTTCGAATGGAT
CTCTTAATTGTTGGGAGGGTTGCCCAAACGCGGTATATAAGGCATACCCAGTAAAGCTTACAAGTAAACCAGATATGGAG
ATGGCGACTAAAGTTGTTGTTTCCATTTTTATAGAATTTCAAGATTACAATGGATCTACGAAAAGATCGTGTATTTACAA
CTACAACGGAATAATATACAAAGTCAACACCAATGATTAAATAGAATTTATGGCTACACAAACCATTGAAGATAGTTCTA
AACCTAGGCCAAAACGAACTGGTGCAGGTAGTTTACTGAAACCCTTGAATTCAGAATATGGAAAAGTCGCCCCGGGTTGG
GGGACTACTCCTTTTATGGGGATCGCAATGGCTTTATTCGCTATATTCCTATCTATCATTTTAGAAATTTATAATTCTTC
CGTTTTACTGGACGGAATTTTAACCAATTAGGTTTCTACTAACTAAAACTAGGAAGTCAGAGTTTTTCCATCCAAAAAAG
CCTTTCTAGTTTAAGATCTACATTTCTAGATATTATGGTAGTTCGACTACGG-AATTTTTTTGTTTCGGTATCTCTGGAA
TATGAGTGTGTGACTTGTTAGAATTGATCCTATTGATAATACATAGAAAGGGCATGTTATCTCTATCAAGATGATTCTAA
TTCGTCAGATATTATTTATTCTAGTATCTGGAACACGAAATAGATAGAGTGGATC-AAAAAAATGGAACTATGATTCATA
CTCACTATTAAGACCTCGCAACCAGACTGAAAAATTCAAGTAGTTCTTAAATAAAAATAAAAAAGAAATTTTCTTCCTTC
CAATTTTGTTTGCCCAAAAGACAACTTTTTTTCTCTCAATTTTGTCGAGTCATTACACTGATTCAATAAATGATTATCAA
GCGGTTCTTATTCGAAGAACCCTT-GCCTTTTGTTTAGCTTGAGA-----
>chr5D_2
-TATGGGCAATATTGAAACTGTACTTTCCAGTAGTATCGCTG-----CTGTTTTTTTGCAGCTTTCGTAGTTGCTGGAAC
TATGTGGTATGGGTCAGCAACGACCCCAATCGAATTATTTGGGCCTACTCGTTATCAGTGGGATCAGGGATACTTTCAGC
AAGAAATATATCGAAGAGTTAGCAATGGTTTAGCCGAAAATCTTAGTTTATCAGAAGCTTGGTCTAAAATTCCCGAAAAA
TTAGCCTTTTATGATTATATTGGTAATAATCCGGCAAAAGGGGGATTATTCAGAGCAGGCTCAATGGACAATGGGGATGG
AATAGCTGTTGGATGGTTAGGACATCCCGTCTTTAGAGATAAATAAGGACGTGAGCTTTTTGTACGCCGTATGCCTACTT
TTTT-TGAAACATTTCCGGTTGTTTTGGTACATGAGGAGGGAATTGTTAGAGCAGACGTTCCTTTTAGAAGAGCAGAATC
CAAATATAGTGTTGAACAAGTAGGTGTAACGGTGGAGTTCTATGGTGGCGAACTTAATGGAGTAAGTTATTCTGATCCTG
CTACTAT-AAAAAA-TATGCGAGGCGTTCTCAATTAGGGGAAATTTTTGAATTAGACCGGGCTACTTTGAAATCTGATGG
TGTTTTTCGCAGCAGTCCAAGGGGTTGGTTCACTTTTGGTCATGCTACCTTTGCTTTGCTCTTCTTTTTCGGACACATTT
GGCATGGTGCTAGAACATTGTTCCGAGATGTTTTTGCTGGTATTGATCCAGATTTGGATGCTCAAGTGGAATTTGGAACA
TTCCAAAAAGTGGGAGATCCAACTACAAGGAAACAGGCAGTCTGATACACATTGTTATAGTATCTTTC-CCTCTCTTTTT
TGATTTGACATGGGAAACATCTCCCATCCTTTCTTTGACTCTTTTTCTTTCTTTATATGGGAAATTCTCCCAAATGACAA
ATGAATAGGTGTGGAAGTTATAATTGTAAATAAACCAGGATCGAATCTATGGAAGCATTGGTTTATACGTTCCTTTTAGT
TTCGACTTTAGGGATAATTTTTTTTCGCTATCTTCTTCCGAGAACCACCTAAGGTTCCACCAACTCCAACTAAAAGAATA
AAATAATTTCATTTAAGTAAGTAGTCCCCCTATCTAGGGGACTTCTTACTTAAATTAGTCTCCGTGTTCTTCGAATGGAA
CTCTTAATTGTTGAGAGGGTTGCCCAAACGCGGTATATAAGGCATACCCAGTAAAGCTTAAAAGTAAACCAGATATGGAG
ATGGCGACTAAAGTTGTTGTTTCCATTTTTTTAGAATTTCAAGATTACAATGGATCTACGAAAAGATCGTGTATTTACAA
CTACAACGGAATAGTATACAAAGTCAACACCAATGATTAAATAGAATTTATGGCTACACAAACCGTTGAAGATAGTTCTA
AACCTAGGCCAAAACGAACTGGTGCAGGTAGTTTACTGAAACCCTTGAATTCGGAATATGGGAAAGTCGCCCCGGGTTGG
GGGACTACTCCTTTTATGGGGATCGCAATGGCTTTATTCGCTATATTCCTATCTATCATTTTAGAAATTTATAATTCTTC
CGTTTTACTGGATGGAATTTTAACCAATTATGTTTCTACTAACTAAAACTAGGAAGTCAGAGTTATTCCATCCAAAAAAG
CCTTTCTAGTTTAAGATCTACATTTCTAGATATTATGGTAGTTCGACCGCAG-AATTTTTTTGTTTCGGTATCTCTGGAA
TATGATTGTGTGACTTGTTAGAATTGATCCTATTGATAATTCATAGAAAGGGCCTGTTATCTCTACCAAGATGATTCTAA
TTCGTCGGATATTATTTATTCTAGTACCTGGAACACGAAATAGATAGAGTGGATA-AAAAAAATGGAACTATGATTCATA
CTCACTATTAAGACCTCGCAACCAGACTGAAAAATTCAAGTAGTTCTTAAATAAAAATAAAAAAGAAATTTTCTTCCTTC
CAATTTTGTTTGCCCAAAAGACAACTTTTTTTCTCTCGATTTTGTCGAGTCATTACACTGATTCAACAAATGATTATCAA
GCGGTTCTTATTCGAAGAACCCTT-GCCTTTTGTTTAGCTTGAGA-----
>chr1A_2
-TATGGGCAATATTGAAACTATACTTTCCAGTAGTATCGCTGCTG------TTTTTTGCAGCTTTCGTAGTTGCTGGAAC
TATGTGGTATGGGTCAGCAATGACCCCAATCGAATTATTTGTTCCTACTCGTTATTAGTGGGATCAGGGATACTTCCAGC
AAGAA--ATATCGAAGAGTTAGCAATGGTTTAGCCGAAAATCTTAGTTTATCAGAAACTTGGTCTAAAATTCCCGAAAAA
TTAGCCTTTTATGATTATATTGGTAATAATCCGGCAAAAGGGGGATTATTCAGAGCAGGCTCAATGGACAATGGGGATGG
AATAGCTGTTGGATGGTTAGGACATCCCGTCTTTAGAGATAAAGAAGGACGTGAGCTTTTTGTACGCCGTGTGCCTACTT
TTTT-TGAAACATTTCCGGTTGTTTTGGTAGATGAGGAGGGAATTGTTAGAGCAGACATTCCTTTTAGAAGAGCAGAATC
CAAATATAGTGTTGAACAAGTAGGTGTAACCGTGGAGTTCTATGGTGGCGAACTTAATGGAGTAAGTTATTCTGATCCTG
CTACTATAAAAAAA-TATGCGAGGCATTCTCAATTAGGGGGAATTTTTGAATTAGACCGGGCTACTTTGAAATCTGATGG
TGTTTTTCGCAGCAGTCCAAGGGGTTGGTTCACTTTTGGTCATGCTACCTTTGCTTTGCTCTTCTTTTTCGGGCACATTT
GGCATGGCGCTAGAACATTGTTCCGAGATGTTTTTGCTGGTATTGATCTAGATTTGGATGCTCAAGTGGAATTTGGAACA
TTCCAAAAAGTGGGAGATCCAACAACAAGGAAACAGGCTGTCTGATACACATTGTTATAGTATCTTTCACCTCTCTTTTT
TGATTTGACATGGGAAACATCTCCCAACCTTTCTTTGACTCTTTTTCTTTCTTTATATGGGAAATTATCCCAAATGACAA
ATGAATAGGTGTGGAAGTTATAATTGTAAATAAACCAGGATCGAATCTATGGAAGCATTGGTTTATACGTTCCTTTTAGT
TTCGACTTTACGGATAATTTG--TTCGCTATCTTCTTCCGAGAACCACCTAAGGTTCCACCAACTCCAACTAAAAGAATA
AAATAATTTCACTTAAGTAAGAAGTCCCCCTATCTGGGATACTTCTTACTTAAATTAGTCTCCGTGTTCTTCGAATGGAT
CTCTTAATTGTTGAGAGGGTTGCCCAAACGCGGTATATAAGGCATACCCAGTAAAGCTTACAAGTAAACCAGATATGGAG
ATGGCGACTAAAGTTGTTGTTTCCATTTTTATAGAATTTCAAAATTACAATGGATCTACAAAAAGATC--GTATTTACGA
CTACAACGGAATAGTATACAAAGTCAACACCAATGATTAAATAGAATCTATGGCTACACAAACCGTTGAAGATATTTCTA
AACCTAGGCCAAAACGAACTAGTGCAGGTAGTTTACTGAAACCCTTGAATTCGGAATATGGGAAAGTCGCCCCGGGTTGG
GGGACTACTCGTTTTATGGGGATCACAATGGCTTTATTCGCTATATTCCTATCTATCATTTTAGAAATTTATAATTCTTC
CATTTTACTGGACGGAATTTTAACCAATTAGGTTTCTACTAACTAAAACTAGGAAGTCAGAGTTTTTCCATCCAAAAAAG
CCTTTCTAGTTTAAGATCTACATTTCTAGATATTATGGTAGTTCGACCACGG--TTTTTTTTGTTTCGGTATCTCTGGAA
TATGAGTGTATGACTTGTTAGAATTGATCCTATTGATAATACATAGAAAGGGCCTATTATCTCTATGAAGATGATTCTAA
TTTGTCAGATATTATTTATTATAGTATCTGGAACACGAAATAGATAGAGTGGAT--AAAAAAATGGAACTATGATTCATA
CTCACTGTTAAGACCTCGCAACTAGACTGAAAAATTCAAGTAGTTTTTAGATAAAAATAAAAAAGAAAATTTCTTCCTTC
CAATTTTGTTT-CCCAAAAGACAACTTTTTTTCTCTCAATTTTGTCGAGTCATTACACTGATTCAATAAATGATTATCAA
GCCGTTCTTATTCGAAGAACCCTT-GCCTTTTGTTTAGCTTGAGA-----
>chr4D_2
-TATGGGCAATATTGAAACTGTACTTTCCAGTAGTATCGCTGCTG-T---TTTTTTTGCAGCTTTCGTAGTTGCTGGAAC
TATGTGGTATGGGTCAGCAACGACTCCAATCGAATTATTTGGGCCTACTCGTTATCAGTGGGATCAGGGATACTTTCAGC
AAGAAATATATTGAAGAGTTAGCAATGGTTTAGCCGAAAATCTTAGTTTATCAGAAGCTTGGTCTAAAATTGCCGAAAAA
TTAGCCTTTTATGATTATACTGGTAATAATCCGGCAAAAGGGGGATTATTCAGAGCAGGTTCAATCGACAATGGGGATGG
AATAGCTGTTGAATGGTTAGGACATCCCGTCTTTAGAGATAAAGAAGGACGTTAGCTTTTTGTAGGCCGTATGCCTACTT
TTTT-TGAAACATTTCCGGTTGTTTTAGTAGATGAGGAGGGAATTGTTAGAGCAGACGTTCCTTTTAGAAGAGCAGAATC
CAAATATAGTGTTGAACAAGTAGGTGTAACGGTGGAGTTCTATGGTGGCGAACTTAATGGAGTAAGTTATTCTGATCCTG
CTACTGT-AAAAAAATATGTGAGGCGGTCTCAATTAGGGTAAATTTTTGAATTAGACCGTGCTGCTTTGAAATCTGTGGG
TGTTTTTAGCAGCAGTCCAAGGGGTTGGTTCACTTTTGGTCATGCTACCTTTGCTTTGCTCTTCTTATTCGGACACATTT
GGCATGGCGCTAGAACATTGTTCCGAGAAGTTTTTGCTGGTATTGATCCAGATTTGGATGCTCAAGTTGAATTTGGAACT
TTCCAAAAAGTGGGAGATCCAACTACAAGGAAACAGGCAGTCTGATACACATTGTTATAGTATCTTTCACCTCTCTTTTT
TAATTTGACATGGGAAACATCTCCCATCCTTTCTTTGACTCTTTTTCTTT-TTTATATGGGAAATTATCCCAAATGACAA
ATGAATAGGTGTGGAAGTTATAATTGTAAATAAACGAGGATCGAATCTATGGAAGCATTGGTTTATACGTTCCTTTTAGT
TTCGACTTTAGGGAT-A-TTTTTTTCGCTATCTTCTTCCGAGAACCACCTAAGGTTCCACCAACTCCAACTAAAAGAATA
AAATAATTTCATTTAAGTAAGAAGTCCCCCTATCTGGGAGACTTCTTACTTAAATTAGTCTCCGTGTTCTTCGAATGGAT
CTCTTAATTGTTGAGAGGGTTGCCCAAATGCGGTATATAAGGCATACCCAGTAAAGCTTACAAGTAAACCATATATGGAG
ATGGCGACTAAAGTTCCTGTTTCCATTTTTATAGAATTTCAAGATTACAATGGATCTACGAAAATATCGGGTATTTACAA
CTACAACGGAATAGTATACAAAGTCAACACCAATGATTAAATAGAATTTATGGCTACACAAACCGTTGAAGATAGTTCTA
AACCTAGCCCAAAACGAACTGGTGCAGGTAGTTTACTGAAACCCTTGAATTCGGAATATGGGAAAGTGGCCCTGGGTTGG
GGGACTTCTCCTTTTATGGGGATCGCAATGCCTTTATTCGCTATATTCCTATCTATCATTTTAGATATTTATAATTCTTC
CGTTTTACTGGATGGAATTTTAACCAATTAGGTTTCTACTAACTAAAACTAGGAAGTCAGAGTTTTTCCATCCAAAAAAG
CATTTCTAGTTTAAGATCTACATTTCTAGATATTATGGTAGTTCGACCGTGG-AATATTTTTGTTTCGGTATCTCTGGAA
TATGAGTGTGTGACTTGTTAGAATTGATCCTATTGATAATACATAGAAAGGGCATGTTATCACTATCAAGATGATTCTAA
TTCGTCAGATATTATTTATTCTAGTATCTGGAACACGAAATAGATAGAGTGGATC-AAAAAAATGGAACTATGATTCATA
CTCACTATTAAGACCTTGCAACCAGACTGAAAAATTCAAGTAGTTCTTCAATAAAAAT-AAAAAGAAATTTTCTTCCTTC
TAATTTTGTTTGCCCAAAAAACAACTTTTTTTCTCTCGATTTTGTCGATTCATTACACTGATTCAATAAATGATTATCAA
GCGGTTCTTATTCGAAGAACCCTT-GCCTTTTGTTTAGCTTGA-------
>chr6B_2
-TATGAGCAATATTGAAACTGTACTTTCCAGTAGTATCGCTGCTG-T--TTTTTTTTGCAGCTTTCGTAGTTGCTGGAAC
TATGTGGTATGGGTCAGCAACGACCCCAATCGAATTATTTGGGCCTACTCGTTATCAGTGGGATCAGGGATACTTTCAGC
AAGAAATATATCGAAGAGTTAGCAATGGTTTAGCCGAAAATCTTAGTTTATCAGAAGCTTGGTCTAAAATTCCCGAAAAA
TTAGCCTTTTATGATTATATTGGTAATAATCTGGCAAAAGGGGGATTATTCAGAGCAGGCTCAATGGACAATGGGGATGG
AATAGTTGTTGGATGGTTAGGACATCCCATCTTTAGAGATAAAGAAGAACGTGAGCTTTTTGTACGCCGTATGCCTACTT
TTTT-TGAAACATTTCTGGTTGTTTTGGTAGATGAGGAGGGAATTGTTAGAGCAGACGTTCCTTTTAGAAGAGCAGAATC
CAAATATAGTGTTGAACAAGTAGGCGTAACGGTGGAGTTCTATGGTGGCGAACTTAATGGAGTAAGTTATTCTGATCCTG
CTACTGT-AAAAAAATATGCGAGGCGTTCTCAATTAGGGGAAATTTTTGAATTAGACCGGGCTACTTTGAAACCTGATGG
TGTTTTTCGCAGCAGTCCAAGGGGTTGGTTCACTTTTGGTCATGCTACCTTTGCTTTGCTCTTCTTTTTCGAACACATTT
GGCATGGCGCTAGAACATTGTTCCGAGATGTTTTTGCTGGTATTGACCCAGATTTGGATGCTCAAGTGGAATTTGGAACA
TTCCAAAAAGTGGGAGATCCAACTACAAGGAAACAGGCAGCCTGATACACATTGTTATAGTATCTTTCACCTCTCTTTTT
TGATTTGACATGGGAAACATCTCCCATCCTTTCTTTGACTCTTTTTGTTTTTTTATATGGGAAATTATCCCAAATTACAA
ATGAATACGTGTGGAAGTAATAATTGTAAATAAACCAGGATCGAATCTATGGAAGCATTGGTTTATACGTCCCTTTTAGT
TTCGACTTTAGGGATAA-AATTTTTCGCTATCTTCTTCCAAGAACCACCTAAGGTTCCACCAACTCCAACTAAAAGAATA
AAATAATTTCATTTAAGTAAGAAGTCTCCCAGATAGGGGGACTTCTTACTTAAGTTAGTCTCCGTGTTCTTCGAATGGAT
CTCTTAATTGTTGAGAGGGTTGCCCAAACGCGGTATATAAGGCATACCCAGTAAAGCTTACAAGTAAACCAGATATGGAG
ATGGCGACTAAAGTTGTTGTTTCCATTTTTATAGAATTTTAAGATTACAATGGATCTACGAAAAGATTGTGTATTTACAT
CTACAACGGAATAGTATACAAAGTCAACACCAATGATTAAATAGAATTTATGGCTACACAAACCATTGAAGATAGTTCTA
AACCTAGGCCAAAACGAACCGGTGCAGGTAGTTTACTGAAACCCTTGAATTCGGAATATGGGAAAGTCGCCCCGGGTTGG
GGGACTACTCCTTTTATGGGGGTCGCAATGGCTTTATTCGCTATATTCCTATCTATCATTTTAGAAATTTATAA------
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>chr3D_2
-TATGGGCAATATTGAAAATGTACTTTCCAGTAGTATCGCTGCTG-TTTTTTTTTTTGCAGATTTCGTAGTTGCTGGAAC
TATGTGGTATGGGTCAGCAACGACCCCAATCGAATTATTTGGGCCTACTCGTTATCAGTGGGACCAGGGATACTTTCAGC
AAGAAATATATCGAAGAGTTAGCAATGGTTTAGCCGAAAATCTTAGTTTATCAGAAGCTTGGTCTAAAATTCCCGAAAAA
TTAGCCTTTTATGATTATATTGGTAATAATCCGGCAAAAGGGGGATTATTCAGAGCAGGCTCAATGGACAATGGGGATGG
AATAGCTGTTGGATGGTTAGGACATCCCGTCTTTAGAGATAAAGAAGGATGTGAGCTTTTTGTACGCCGTATGCCTACTT
TTTT-TGAAACATTTCCGGTTGTTTTGGTAGATGAGGAGGGAATTGTTAGAGCAGACATTCCTTTTAGAAGAGCAGAATC
CAAATATAGTGTTGAACAAGTAGGTGTAACGGTGGAGTTCTATGGTGGCGAACTTAATGGAGTAAGTTATTCTAATCCTG
CTACTGT-AAAAAAATATGCGAGGCGTTCTCAATTAGGGGAAATTTTTGAATTAGACCGGGCGACTTTGAAATCTGATGG
TGTTTTTCGCAGCAGTCCAAGGGGTTGGTTCACTTTTGGTCATGCTACCTTTGCTTTGCTCTTCTTTTTCAGACACATTT
GGCATGGCGCTAGAACATTGTTCCGAGATGTTTTTGCTGGTATTGATCCAGATTTGGATGCTCAAGTGGAATTTGGAACA
TTCCAAAAAGTGGGAGATCCAACTACAAGGAAACAGGCAGTCTGATACACATTGTTATAGTATCTTTCACCTCTCTTTTT
TGATTTGACATGGGAAACATCTCCCATCCTTTCTTTGACTCTTTTTCTTTCTTTATATGGGAAATTCTCCCAAATGACAA
ATGAATAGGTGTGGAAGTTATAATTGTAAATAAACCAGGATCGAATCTATGGAAGCATTGGTTTATACGTTCCTTTTAGT
TTCGACTTTAGGGATAA-TTTTTTTCGCTATCTTCTTCCGAGAACCACCTAAGGTTCCACCAACTCCAACTAAAAGAATA
AAATAATTTCATTTAAGTAAGAAGTCCCCCTATCTGGGAGACTTCTTACTTAAATTAGTCTCCGTGTTCTTCGAATGGAT
CTCTTAATTGTTGAGAGGGTTGCCCAAAC---------------------------------------------------
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>chr1D_4
---TGGGCAATATTGAAACTGTACATTCCAGTAGTATCGCTGCTG-T----TTTTTTGCAGCTTTTGTAGTTGCTGGAAC
TATGTGGTATGGGTCAGCAACAACCCCAATCGAATTATTTGGGCCTACTCGTTATCAGTGGGATCAGAGATACTTTCAGC
AAGAAATATATCGAAGAGTTTGCAATGGTTTAGCCAAAAATCTTAGTTTATCAGAAGCTTGGTCTAAAATTCCCGAAAAA
TTAGCCTTTTATGATTATATTGGTAATAATCCGGCAAAAGAGGGATTATTCAGAGCAGGCTCAATGGACAATGGGGATGG
AATAGTTGTTGGATGGTTAGGACATCCTGTCTTTAGAGATAAAGAAGGACGTGAGCTTTTTGTACGCCGTATGCCTACTT
TTTT-TGAAACATTTCCAGTTGTTTTGCTAGATGAGGAGGGAATTGTTAGAGCAGACATTCCTTTTAGAAGAGCAGAATC
CAAATATAGTGTTGAACAAGTAGGCATAATGGAGGAGTTCTATGGTGGCGAACTTAATGGAGTAAGTTATTCTGATCCTG
CTACTAT-AAAAAAAATATGTGAGCGTTCTCAATTAGGGGAAAATTTTGAATTAGACCGGGCTACTTTGAAATCTGATGG
TGTTTTTCGCAGCAGTCCAAGGGGTTGGTTTACTTTTGGTCATGCTACCTTTGCTTTGCTCTTCTTTTTCGGACACATTT
GGCATGGCGCTAGAACATTGTTCTGAGATGTTTTTGCTAGTATTGATCCAAATTTGGATGCTCGAGTGGAATTTGGAACA
TTTCAAAAAGTGGGAGATCCAACTATAAGGAAATAGGCAGTCAGATACACATTGTTATAGTATCTTTCACCTCTCTTTTT
TGATTTGACATGGGAAACATATCCCATCCTTTCTTTGACTCTTCTTATTTCTTTATATGGGAAATTATCCCAAATGACAA
ATGAATAGGTGTGGAAGTTATAATTGTAAATAAACCAGGATCAAATCTATGGAAGCATTGGTTTATACGTTCCTTTTAGT
TTCGACTTTAGGGATAG-ATTTTTTCGCTATCTTATTCCGAGAATCACCTAAGGTTCCACCAACTCCAACTAAAAGAATA
AAATAATTTCATTTAAGTAAGAAGTCTCCCAGATAGGGGGACTTCTAACTTAAATTAGTCTCTGCGTTCTTCGAATGGGT
CTCTTAATTGTTGAGAGGGTTGCCCAAACGCGGTATATAAGGCATACCCATTAAAGCTTACAAGTAAACTAGATATGGAG
ATGGCGACTAAAGTTGTTGTTTCCATTTTTATAGAATTTCAAGATTACGATGGATCTACAAAAAGATCGTGTATTTACAA
CTACAGTGGAATAGTATACAAAGTCAACACTAATGGTTAAATATAATTTAAGGCTATGCAAACCGTTGAAGATAGTTCTA
AACCTAGGCCAAAACGAAATGGTGTAGGTAGTTTACTGAAACCCTTGAATTCGGAATATGGGAAATTCGCCCCGGGTTAT
TGCGAAATTATAATTCTTCCGT----------TTTATTCGCTATATTCCTATCTATCATTTTAGAAATTTATAATTCTTC
CGTTTTATTGGACGGAATTTTAACCAATTAGG---------------------AAGTCATAGTTTTTCCATCCAAAAAAT
CCTTTCTAGTTTAAGATCTACATTTCTAGATATTATGGTAGTTCGACCGCGG-A-TTTTTTTGTTTCGGTACCTCTGGAA
TATGAGCGTGTGACTTGTTAGAATTGGTCCTATTGATAATACATAGAAAGGGCCTGTTATCTCTATCAAGATGATTCTAA
TTCATCAGATATTATTTATTCTAGTATCTGGAACACGAAATAGATAGAGCGGAT---AAAAAATGGAACTATGATTCATA
CTCACTATTAAGACCTTGCAACCCGACTGGAAAATTCAAGTAGTTCTTAAATAAATAAATA----AAAATTTCTTCCTTC
CAATTTTGTTTGCCCAAAAGAAAA--TTTTCTCTCTCGATTTGGTCGAGTCATTACACTCATTCAATAAATGATTATCAA
GCGGTTCTTATTCGAAGAACCCTTTGCCTTTTGTTTAGCTTGAGA-----
>chr5D_68
------------------------------------------------------------------------GCTGGAAC
TATGTGGTATGGGTCAGCAACGACCCCAATCGAATTATTTGGGCCTACTCGTTATCAGTGGGATCAGGGATACTTTCAGC
AAGAAATATATCGAAGAGTTATCAATGGTTTAGCCGAAAATATTAGTTTATCAGAAGCTTGGTCTAAAATTCCCGAAAAA
TTAGCCTTTTATGATTATATTGGTAATAATCCGGCAAAATGGGGATTATTCAGAGCAGGCTCAATGGACAATGGGGATGG
AATAGCTGTTGGATGGTTAGGACATCCCGTCTTTAGAGATAAAGAAGGACGTGAGCTTTTTGTACGCCGTATGCCTACTT
TTTT-TGAAACATTTCTGGTTGTTTTGGTAGATGAGGAGGGAATTGTTAGAGTAGACGTTCCTTTTAGAAGAGCAGAATC
CAAATATAGTGTTGAACAAGTAGGTGTAACGGTGGAGTTCTATGGTGGCGAACTTAATGGAGTAAGTTATTCTGAACCTG
CTACTGT-AAAAAAATATGCGAGGCGTTCTCAATTAGGGGAAATTTTTGAATTAGACCGGGCTACTTTGAAATCTGATGG
TGTTTTTTGCAGCAGTCCAAGGGGTTCGTTCACTTTTAGTCATGCTACCTTTGCTTTGGTCTTCTTTTTCGGACACATTT
GGCATGGTGCTAGAACATTGTTCCGAGATGTTTTTGCTGGTATTGATCCAGATTTGGATGCTCAAGTGGAATTTGGAACA
TTCCAAAACGTGGGAGATCCAACTACAAGGAAACAGGCAGTCTGATACACATTGTTATAGTATCTTTCACCTCTTTTTTT
TGATTTGACATGGGAAACATCTCCCATCCTTTCTTTGACTCTTTTTCTTTCTTTATATGGGAAATTATCCCAAATGACAA
ATGAATAGGTGTGGAAGTTATAATTGTAAATAAACCAGGATCGAATCTATGGAAGCATTGGTTTATACATTCCTTTTTGT
TTCGACTTTAGGGATAA-TTGTTTTCGCTATCTTCTTCCGAGAACCACCTAAGGTTCCACCAACTCCAACTAAAAGAATA
AAATAATTTCATTTAAGTAAGAAGTCCCCCTATCTGGGAGACTTCTTACTTAAATTAGTCTCCGTGTTCTTCGAATGGAT
CTCTTAATTGTTGAGAGGGTTGCCCAAACGCGGTATATAAGGCATACCCAGTAAAGCTTACAAGTAAACCAGATATGGAG
ATGGCGACTAAAGTTGGTGTTTCCATTTTTATAGAATTTCAAGATTACAATGGATCTACGAAAAGATCGTGTATTTACAA
CTACAACGGAATAGTATACAAAGTCAACACCAATGATTAAATAGAATTTATGGCTACACAAACCGTTGAAGATAGTTCTA
AACCTAGGCCAAAACGAACTGGTGCAGGTAGTTTACTGAAACCCTTGAATTCAGAATAATGGGAAGTCGCCCCGGGTTGG
GGGACTACTCCTTTTATGGGGATCGCAATGGCTTTATTCGCTATATTCCTATCTATCATTTTAGAAATTTATCATTCTTC
CGTTTTACTGGACGGAATTTTAACCAATTAGGTTTCTACTAACTAAAACTAGGAAGTCAGAGTTTTTCCATCCAAAAAAG
CCTTTCTAGTTTAAGATCTACATTTCTAGATATTATGGTAGTTCGACCGCGG-ATTTTTTTTGTTTCGGTATCTCTGGAA
TATGAGTGTGTGACTTGTTAGAATTGATCCTATTGATAATACATAGAAAGGGCCTGTTATCTCTATCAAGATGATTCTAA
TTCGTCACATATTATTTATTCTAGTATCTGGAACACGAAATAGATAGAGTGGAT--AAAAAAATGGAACTATGATTCATA
CTCACTATTAAGACCTCGCAACCAGACTGAAAAATTCAAGTAGTTCTTAAATAAAAATAAAAAATAAATTTTCTTCCTTC
CAATTTTGTTTGCCCAAAAGACAAATATTTTCTCTCGA--TTTGTCGAGTCATTACATTGATTCAATAAATGATTATCAA
GCGGTTCTTATTCGAAGAACCCTT-GCCTTTTGTTTAGCTCGAGA-----
>chr5D_195
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------ATCTTAGTTTATCAGAAGCTTGGTCTAAAATTCCCGAAAAA
TTAGCCTTTTATGATTATATTGGTAATAATCCGGCAAAAGGGGGATTATTCAGAGCAGGCTCAATGGACAATGGGGATGG
AATAGCTGTTGGATGGTTAGGAAATCCCGTCTTTAGAGATAAAGAAGGACGTGAGCTTTTTGTACGCCGTATGCCTACTT
TTTT-TGAAAAATTTCCGGTTGTTTTGGTAGATGAGGAGGGAATTGTTAGAGCAGACGTTCCTTTTAGAAGAGCAGAATC
CAAATATAGTGTTGAACAAGTAGGTGTAACGGTGGAGTTCTATGGTGGCGAACTTAATGGAGTAAGTTATTCTGATCCTG
CTACTGT-AAAAAAATATGCGAGGCGTTCTCAATTAGGGGAAATTTTTGAATTAGACCGGGCTACTTTGAAATCTGATGG
TGTTTTTCGCAGCAGTCCAAGGGGTTGGTTCACTTTTGGTCATGCTACCTTTGCTTTGCTCTTCTTTTTCGGACACATTT
GGCATGGCGCTAGAACATTGTTCCGAGATGTTTTTGCTGGTATTGATCCAGATTTGGATGCTCAAGTGGAATTTGGAACA
TTCCAAAAAGTGGGAGATCCAACTACAAGGAAACAGGCAGTCTGATACACATTGTTATAGTATCTTTCACCTCTCTTTTT
TGATTTGACATGGGAAACATCTCCCATCCTTTCTTTGACTCTTTTTCTTTCTTTATATGGGAAATTCTCCCAAATGACAA
ATGAATAGGTGTGGAAGTTATAATTGTAAATAAACCAGGATCGAATCTATGGAAGCATTGGTTTATACGTTCCTTTTAGT
TTCGACTTTAGGGATAA-TTTTTTTCTCTATCTTCTTCCGAGAACCACCTAAGGTTCCACCAACTCCAACTAAAAGAATA
AAATAATTTCATTTAAGTAAGAAGTCCCCCTATCTGGGAGACTTCTTACTTAAATTAGTCTCCGTGTTCTTCGAATGGAT
CTCTTAATTGTTGAGAGGGTTGCCCAAACGCGGTATATAAGGCATACCCAGTAAAGCTTACAAGTAAACCAGATATGGAG
ATGGCGACTAAAGTTGTTGTTTCCATTTTTATAGAATTTCAAGATTACAATGGATCTACGAAAAGATCGTGTATTTACAA
CTACAACGGAATAGTATACAGAGTCAACACCAATGATTAAATAGAATTTATGGCTACACAAACCGTTGAAGATAGTTCTA
AACCTAGGCCAAAACGAACTGGTGCAGGTAGTTTACTGAAACGCTTGAATTCGGAATATGGGAAAGTCGCCCCGGGTTGG
GGGACTACTCCTTTTATGGGGATCGCAATGGCTTTATTCGCTATATTCCTATCTATCATTTTAGAAATTTATAATTCTTC
CGTTTTACTGGACGGAATTTTAACCAATTAGGTTTCTACTAACTAAAACTAGGAAGTTAGAGTTTTTCCATCCAAAAAAG
CCTTTCTAGTTTAAGATCTACATTTCTAGATATTATGGTAGTTCGACCGCGGAA-TTTTTTTGTTTCGGTATCTCTGGAA
TATGAGTGTGTGACTTGTTAGAATTGATCCTATTGATAATACATAGAAAGGGCCTGTTATCTCTATCAAGATGATTCTAA
TTCGTCAGATATTATTTATTCTAGTATCTGGAACACGAAATAGATAGAGTGGATC-AAAAAAATGGAACTATGATTCATA
CTCACTATTAAGACCTCGCAACCAGACTGAAAAATTCAAGTAGTTCTTAAATAAAAATAAAAAAGAAATTGTCTTCCTTC
CAATTTTGTTTGCCCAAAAGACAACTTTTTTTCTCTCGATTTTGTCGAGTCATTACACTGATTCAATAAATGATTTTCAA
GCGGTTCTTATTCGAAGAACCCTT-GCCTTTTGTTTAGCTTGAGA-----
>chr3B_1007
GCAATGGC------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------TTTATACGTTCCTTTTAGT
TTCGACTTTAGGGATAA-TTTTTTTCGCTATCTTCTTCCGAGAACCACCTAAGGTTCCACCAACTCCAACTAAAAGAATA
AAATAATTTCATTTAAGTAAGAAGTCTCCCAGATAGGGGGACTTCTTACTTAAATTAGTCTCCGTGTTCTTCGAATGGAT
CTCTTAATTGTTGAGAGGGTTGCCCAAACGCGGTATATAAGGCATACCCAGTAAAGCTTACAAGTAAACCAGATATGGAG
ATGGCGACTAAAGTTGCTGTTTCCATTTTTATAGAATTTCAAGATTACAATGGATCTACGAAAAGATCGTGTATTTACAA
CTACAACGGAATAGTATACAAAGTCAACACCAATGATTAAATAGAATTTATGGCTACACAAACCGTTGAAGATAGTTCTA
AACCTAGGCCAAAACGAACTGGTGCAGGTAGTTTACTGAAACCCTTGAATTCGGAATATGGGAAAGTCGCCCCGGGTTGG
GGGACTACTCCTTTTATGGGGGTCGCAATGACTTTATTTGCTATATTCCTATCTATCATTTTAGAAATTTATAATTCTTC
CGTTTTACTGGACGGAATTTTAACCAATTAGGTTTCTACTAACTAAAACTAGGAAGTCAGAATTTTTCCATCCAAAAAAG
CCTTTCTAGTTTAAGATCTACATTTCTAGATATTATGGTAGTTCGACCGCAGAA-TTTTTTTGTTTCGGTATCTCTGGAA
TATGAGTGTGTGACTTGTTAGAATTGATCCTATTGATAATACATAGAAAGGGCCTGTTATCTCTATCAAGATGATTCTAA
TTCGCCATATATTATTTATTCTAGTATCTGGAACACGAAATAGATAGAGTGGAT--AAAAAAATGGAACTATGATTCATA
CTCACTATTAAGACCTCGCAACCAGACTGAAAAATTCAAGTAGTTCTTAAATAAAAATAAAAAAGAAATTTTCTTCCTTC
CAATTTTGTTTGCCCAAAAGACAACTTTTTTTCTCTCGATTTTGTCGAGTCATTACACTGATTCAATAAATGATTATCAA
GCGGTTCTTATTCGAAGAACCCTT-GCCTTTTGTTTAGCTTGAGA-----
>SNPs
S---------------------------S----S-------------------------------------S---S----
---------------------------SS---------------------------------------------------
S----------------------------------------------S-------------------S-------S----
------------S------------------S---------------------S--------S---------S-------
--------------------------------------------------------------------------------
-----SS----------SS-------------------------------------------------------S-----
-----------------------------S-----------S-S------------------------------------
---S----S----------------------------S--------------S------------S---------S----
------------S----------------------------------------------S-----------------S--
--------S---------------------------S-------------------------------------------
-------------------------------------S------------------------------------------
---------------------------S-------------------------------------------S--------
----------------------------------------------S----------S--------------------S-
-----------------------------------S---------------------------------S----------
----------------S------------------------------------------S--------------------
---------------------S-------S------------------------S-S-----------------S-----
---------S------S---------------------------------------------------------------
--------------------------------------------------------------------------------
---------------S-----S---------------------S-----------------------------S------
----------------------------------------------------------------------------S---
---------S----------------------------------------S-S---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------S-------------S--------S---S--------------------
-------------------S---------------------------------------S--------------------
-------------------------------------S------------------------------------------
--------------------------------S------------SSSSS
>forward_76
--------------------------------------------------------TGCAGCTTTCGTAGTGGCTA----
--------------------------------------------------------------------------------
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--------------------------------------------------
>reverse_1275
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------GTGGAG
ATGGCGACTGAAGT------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------
