>input_sequence_87517
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-----------------------------------------ATGAGGGTGGGCGCTCATGATCTGAAGCTCAAGGGGCTC
AAGAGGTCTCTCAAGGAGCACAAGGCCAGGCTCTACATCATCCGTCGATGCGTCGTGATGCTCCTAAGATGGCATGATTG
A-------------------------------------------------------------------------------
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>chr5D_1_TraesCS5D01G183600
ACATTCACAACTATGCTGACCTTGCATAACAAGTGGTGGTTGACTATGGAAGTTATTGTGATACCCCTGTACAAGTCATT
GGTGCTGACTTTCCTACCTCCTCAAATAAAATATAACCTAATGTTTGACATTGGCTTAGTTAGGTGCCCTACATGCTCTG
TTTACGTTATCCCTAAACGGCTAAACCAGACAAGCCATGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNA
TATATTACCACTCAAATGGAAGGTCAGAGAATTACAGCAGAGGTTCTGGTACAAATTCAGCTAGAAGGGAATTCTGGTAC
TTAGTTTTGTGAACCTTTTGGTGGACAGATAGGAATGGCTTGTGCCGGTGATATCTTTTAGCTGTTCAATCCTTGAATGG
AAAATTAAAATTAGGTATCTGCACTATAACATGAGATTTCTTTGGTACCCATGGTAGTGGCTCTATCTGGTATCCCATTG
GGAGCTTAGTCATCCTTATCATAAACCTCTTTTATTTATCCATCGTGCAGTGCAGATGATACCGCAATGTGATTACCCTA
TTATTTATCATCGGGTCAATCCGGCGTCAGGAAATTGAACTTAGATTACTCCAGGATCACATAAGACTTTCTTTTCTTTA
TGCAGACATGGACGCAGCGATAAGTTAGTTTATGGAAATATGTGCACAACCATGACATTGAAAGAAGCCTCATCAGCTGA
CACAGCCCACACAGAAGCCGCCTATATAAACCGTACTACTACAAACTCCAAAAACC-CAACACAGACCAGAGTTTGGGAT
TCCAAATCCAAGAGGCAACCACATTTCTAGATCATCAGAAGATGAGGGTGGGCGCTCATGATCTGAAGCTCAAGGGGCTC
AAGAGGTCTCTCAAGGAGCACAAGGCCAGGCTCTACATCATCCGTCGATGCGTCGTGATGCTCCTAAGATGGCATGATTG
ATCAAGCAATTTGGAGTGAATTTCTTCACAGTTTCTCTTACTTCTCTATCTGACTGGCCAGCCTAGTGGCTGAAATTTTG
GGTCTCTATCTCTGATGTATGTAACAGCTGTATATAACCTGTCAAAGTAGGAAGACTGGAAATGAAAGGCAACTTCTTTC
TTGATGTGGTATCTCCAGAAATAATCTGAGGCTTATACCCTTTTGTCCCTTTTCTTCGTCTAAAACATGACATGCATTTT
GATGTGTGTTCGAGAAAAAAAAAGGAAATCAAAATTTTCTTGGCGCCGGGAACA-----TAATCTAGCATATACCACAGG
TGCAGTGCAGGGAGGTGAGACCAACAGATTTGATATGGAATTTGTCATCCC-ATCATTAGTTGGTACCATTTCCAAGTCC
GAGGCTGATGGCTTTTGATGCTTGATGCTCAATGCACCGATTTCTCTGAATGTTCAC-CTCACTCTCCTCTTATCAAACC
TGCACCGAGTGTGATATCTCAGCAGTTTACAAGACAGTGGCCCGAGTTTAATTCCTACTGCAACGGACCCGGCTTATGGG
GTTTTCGACGCGACTGTGATCGGCTTGCCCTAGCAGTCTAATTAGCTTCCTACCCCAAAATTACAAAACAAGAGACGCGT
CCGAGCAACAGACACACA-TTTCTTTGCTTGAGTACTCCAATAATATCCTAACCGCAATTAGAAAAGATCTCAAAAGTTG
GTCAGTGTGTAGGCGCTTGTGGGAGGGAGCACATGGCTTTTGGCAAAGCACAAAACAGTGCCTTCCTCGTTCTTGAAATA
AAGCCTGATGGTGAAATGAGCCATAGTGAAATGCGAGCCCACTTTGTGAAAGCTGATCAGTGCTCTGACTGTTCTACAGT
TCCTTTTTGGCTCTTCTTTTGGGGATTGCACATCTTCTAGATCTTTCTTCACATGTTTGGTGCTGGTTTTGCTTTT-CTT
GATTTCTCTCAGAAACTCTTCTCCTTTTAATGATTAAGCTGATACATCAT
>chr5B_1
ACATTCACAACTGTGCTGACCTTGCATAACAAGCAGTAGTTGACTATGGAAGTTATTGTGATACCCCTGTACAAGTAATT
GGTGCTGACTTTTCTACCTCCACAAATAAAATATAACCTAATGTTTGACATTGGCTTAGTTAGGTGCCCTACATGCTCTG
TTTACGTTATCCCTAAACGGCTAAACCAGACAAGCCATGTTGTGTCAACAAAGCAAACATTGCAGATACATGCTGTGCTT
ACCATGTTGTGTTACTCAGT------------------------------------------------------------
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----TTTTGTCAACCCTTTGGTGGACATATAGGAATGGTTTGCGCCGGCGATATTTTTGAGCTGTTTAATCCTTGAATGG
AAAACTAAAATTAGGTATATGCACTATAACATGAGATTTCTTTGGTACCCATGGTAGTGGCTCTATCTGGTATCCCATTG
GGAGCTTAGTCATCCTTATCATAAACTTCTTTTATTTATCCATCATGCGGTGCAGATGATACTGCAATGCGATTACCCTA
TTATTTATCATCGGGTCAATCCGGCGTCAGGAAATTGAACTTAGATTACTCCAGGATCACATAAGACTTTCTTTTCTTTA
TGCAGACATGGACGCAGCGATAAGTTAGTTTATGGAAATATGTGCACAAGCATGGCGTTGAAAGAACCCTCATCAGCTGA
CACAGGGGCATGGCAACT-GCCTATATAAACCATACTACTACAAACTCCAAAAACCACAACACAAACCAGAGTCTGGGAT
TCCAAACCCAAGAAGCTACCACATTTCTAGATCATCAGAAGATGAGGGTGGGTGCTCATGATCTGAAGCTCAAGGGGCTC
AAGAGGTCTCTCAAGGAGCACAAGGCCAGGCTCTACATCATCCGTCGCTGCGTCGTGATGCTCCTAAGCTGGCATGACTG
ATCAAGCGATTCGGAGTGAATTTCTTCACAGCTTCTCTTACTTCTCTATCTGACTGGCCAACCTAGTGGCTGAAATTTTG
GGTCTCTATCTCTGATGTATGTAACAGCTGTATATAACCTGTCAAAGTAGGAAGACTGGAAATGAAAGGCAACTTCTTTC
TTGATGTGGTATCTCCAGAAATAATCTGAGGTTTATACCCCTTTGTCCCTTTTCTTCTTCTAAAACATGGCATGCATTTT
GATGTGTGTTCGAGAAAAAAAAAGGAAATCAAAATTTTCTTGGCGCCGGGAACA-----TAATCTAGCATATACCACAGG
TGCAGTGGAGGGAGGTGAGACCAGCAGATTTGATATGGAATTTGTCATCCC-ATCATTAGTTGGTACCATTTCCAAGTCC
GAGGCTGATGGCTTTTGATGCTTGATGCTCAATGCACCGATTTCTCTGAATGTTCAC-CTCACTCTCCTCTTATCAAACC
TGCACCGAGTGTGATATCTCAGCAGTTTACAGGACAGTGGCCCGAGTTTAATTCCTACTGCAACGGACCCGGTTTATGGG
GTTTTCGACGCGACCATGATCGGCTTGCCCTAGCAGTCTAATTAGCTCCCTACCCCAAAATTACAAAACAAGAGACGCGT
CCGAGCAGCGGACACACA-TTTCTTTGCTTGAGTACACCAATAATATCCTAACCACAATTAGAAAAGATCTCAAAAGCTG
GTCAGTGTGTAGGTGCTTGTGGGAGGGAGCACATAGCTTTTGCCAAAGCACAAAACAGTGCCTTCCTCGTTTTTGAAATA
AAGGCTGATGGTGAAATGAACCATAGTGAAATGCGAGCCCACTTTGTGAAAGCTGATCAGTGCTCTGACTGTTCTACAGT
TCCTTTTTGGCTCTTCTTTTGGGGATTACACATCTTCTAGATCTTTCTTCACATGTTTG-TGTTGGTTTTGCTTTT-CTT
GGTTTCTCTCAGAAACTCTTCGCCTTTGAATGATTAAGCTGATACATCAT
>chr5A_1
ACATTCACAACTGTGCTGACCTTGCATAACAAGTGGTAGTTGACTATAGAAGTTATTGTGATAGCCCTGTACAAGTAATT
GGTGCTGACTTTCCTACCTCCTCAAATAAAATATAACCTAATGTTTGACATTGGCTTAGTTAGGTGCCTTACATGCTCTG
TTTACGTTATCCCTAAACGGCTAAACCAGACAAGCCATGTTGTGTCAACAAAGCAAACATTGCAGATACATGCTGTGCTT
ACCATTTTGTGTTACTCA--------------------------------------------------------------
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-------TGTCAACCCTTTGGTGGACATATAGGAATGGTTTGCGCCGGCGATATTTTTGAGCTGTTTAATCCTTGAATGC
AAAACTAAAATTAGGTATCTGCACTATAACATGAGATTTCTTTGGTACCCATGGTAGTGGCTCTATCTGGTATCCCATTG
GGAGCTTAGTCATCCTTATCATAAACTTCTTTTATTTATCCATCGTGCGGTGCAGATGATACTGCAATGCGATTACCCTA
TTATTTATCATCGGGTCAATCCGGCGTCAGGAAATTGAACTTAGATTACTCCAGGATCACATAAGACTTCCTTTTCTTTA
TGCAGACATGGACGCAGCGATAAGTTAGTTTATGGAAATATGTGCACAAGCATGGCATTGAAAGAAGCCTCATCAACTGA
CACAGCCCACATAGAAGGCGCCTATATAAACTGTACTACTACAAACTCCAAAAACC-CAACACAAACCAGAGTTTGGGAT
TCCAAATCCAAGAGGCAGCCACATTTCTATATCATCAGAAGATGAGGGTAGGCGCTCATGATCTGAAGCTCAAGGGGCTC
AAGAGGTCTCTCAAGGAGCACAAGGCCAGGCTCTACATCATCCGTCGATGCGTCGTGATGCTCCTAAGCTGGCATGACTG
ATCAAGCGATTCGGAGTGAATTTCTTCACAGTTTCTCTTACTTCTCTATCTGACTGGCCAGCCTAGTGGCTGAAATTTTG
GGTCTCTATCTCTGATGTATGTAACAGCTGTATATAACCTGTCAAAGTAGGAGGACTGGAAATGAATGGCAACTTCTTTC
TTGATGTGGTATCTCCAGAAATTTTCTGAGGTTTATACCCTTTTTTCCTCTTGCTTCTTCTAAAAAATGACATGCATTTT
GATGCGTGTTTGAGAAAAGAAAAGGAAACCAAATTTTGCTTGGCATGCGGAATATCATCTACTGTAGCACTTACCACAGG
TGCAGTGCAGGGAGGTGAGACCAACAGATTTGATATGGAATTTGTCACCCCCATCATTAGTTGGTACCATTTCCAAGTCT
GAGGCTGATGGCTTTTGATGCTTGATTCTCAATGCACCGATTTCTCTGAATGCTCACACTCACTCTCCTCTTATCAAACC
TGCACCGAGTGTGATATCTCAGCAGTTTACAGGACAGTGGCCCGAGTTTAATTCCTACTGCAACGGACCCGGCTTATGGG
GTTTTCGACGCGGCCGTGATCGTCTTGCCCTAGCAGTCTAATTGGCTTCCTACCCAAAAATTACAAAACAAGAGACGCGT
CCGAGCAGCAGACGCACATTTTCTTTGCTTGAGTACTCCAATAATATCCTAAGCGCAATTAGAAAAGATCTCAAAAGTTG
GTCAGTGTGTAGGCGCTTGTGGGAGGGAGCACATGGCTTTTGGCAAAGCAGAAAACAGTGCCTTCCTCGTTTTTGAAATA
AAGCCTGATGGTGAAATGAACCATAGTGAAATGCGAGCCCACTTTGTGAAAGCTGATCAGTGCTCTGACTGTTCTACAGT
TCCTTTTTGGCTCTTCTTTTGGGGATTACACATCTTCTAGATCTTTCTTCACATGTTTG-TGTTGGTTTTGCTTTTTCTT
GGTTTCTCTCAGAAACTCTTCTCCTTTTAATGATTAAGCTGATACATC--
>SNPs
------------S------------------------S--------------------------------------S---
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----------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSS------S----S-----------S----------S---S-----S-----S---S-------S-------------
----S---------------------------------------------------------------------------
--------------------------S---------------------S-------------S------S----------
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-------------------------------------------------S----S-------------------------
-----------S-----S----------------------------------------------S---------------
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--------------------------------------------------------------------S--------S--
-------S---S--------------------------------------------------------------------
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-------------------------------S-------------------------S----------------------
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-------------------------------S------------------------------------------------
--------------S-----------------------------------------------------------------
-------S------------------------------------------------------------------------
-----------------------------------------------------------------------S--------
-------------------S------------------------------------------------------------
---------------------------S-------------------------------S--S-----------------
-S------------------------------------------------
>forward_703
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-------------------------------------------CGTGCAGTGCAGATGATACC-----------------
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>reverse_1940
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-------------------GCCATAGTGAAATGCGAGCC-----------------------------------------
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