>input_sequence_87515
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---------------------------------------------ATGAGGGTAGGCGCTCATGATCTGAAGCTCAAGGG
GCTCAAGAGGTCTCTCAAGGAGCACAAGGCCAGGCTCTACATCATCCGTCGATGCGTCGTGATGCTCCTAAGCTGGCATG
ACTGA---------------------------------------------------------------------------
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>chr5A_1_TraesCS5A01G179100
GACAACTTTATTGCAGATTTCGTATGAACAAGACTACTGCCATTGCTCCCCTAGATTGTGTTTAAGATTCTTTGGATCCA
AACA------TTTCTAAAAAGGGAAAGGAAAACACTGATCGATTTGCAGCAGCCAACATGTAACTGACGGGCAGGTTCGG
TGTACATAACGGGATG---------GAGCTTACTTGCATCTGTTTGTCTGCTAAGCTTGCGTTTTGGGAGCAGGGTTTCA
GTTGACATTCACAACTGTGCTGACCTTGCATAACAAGTGGTAGTTGACTATAGAAGTTATTGTGATAGCCCTGTACAAGT
AATTGGTGCTGACTTTCCTACCTCCTCAAATAAAATATAACCTAATGTTTGACATTGGCTTAGTTAGGTGCCTTACATGC
TCTGTTTACGTTATCCCTAAACGGCTAAACCAGACAAGCCATGTTGTGTCAACAAAGCAAACATTGCAGATACATGCTGT
GCTTACCATTTTGTGTTACTCA----------------------------------------------------------
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-----------TGTCAACCCTTTGGTGGACATATAGGAATGGTTTGCGCCGGCGATATTTTTGAGCTGTTTAATCCTTGA
ATGCAAAACTAAAATTAGGTATCTGCACTATAACATGAGATTTCTTTGGTACCCATGGTAGTGGCTCTATCTGGTATCCC
ATTGGGAGCTTAGTCATCCTTATCATAAACTTCTTTTATTTATCCATCGTGCGGTGCAGATGATACTGCAATGCGATTAC
CCTATTATTTATCATCGGGTCAATCCGGCGTCAGGAAATTGAACTTAGATTACTCCAGGATCACATAAGACTTCCTTTTC
TTTATGCAGACATGGACGCAGCGATAAGTTAGTTTATGGAAATATGTGCACAAGCATGGCATTGAAAGAAGCCTCATCAA
CTGACACAGCCCACATAGAAGGCGCCTATATAAACTGTACTACTACAAACTCCAAAAACC-CAACACAAACCAGAGTTTG
GGATTCCAAATCCAAGAGGCAGCCACATTTCTATATCATCAGAAGATGAGGGTAGGCGCTCATGATCTGAAGCTCAAGGG
GCTCAAGAGGTCTCTCAAGGAGCACAAGGCCAGGCTCTACATCATCCGTCGATGCGTCGTGATGCTCCTAAGCTGGCATG
ACTGATCAAGCGATTCGGAGTGAATTTCTTCACAGTTTCTCTTACTTCTCTATCTGACTGGCCAGCCTAGTGGCTGAAAT
TTTGGGTCTCTATCTCTGATGTATGTAACAGCTGTATATAACCTGTCAAAGTAGGAGGACTGGAAATGAATGGCAACTTC
TTTCTTGATGTGGTATCTCCAGAAATTTTCTGAGGTTTATACCCTTTTTTCCTCTTGCTTCTTCTAAAAAATGACATGCA
TTTTGATGCGTGTTTGAGAAAAGAAAAGGAAACCAAATTTTGCTTGGCATGCGGAATATCATCTACTGTAGCACTTACCA
CAGGTGCAGTGCAGGGAGGTGAGACCAACAGATTTGATATGGAATTTGTCACCCCCATCATTAGTTGGTACCATTTCCAA
GTCTGAGGCTGATGGCTTTTGATGCTTGATTCTCAATGCACCGATTTCTCTGAATGCTCACACTCACTCTCCTCTTATCA
AACCTGCACCGAGTGTGATATCTCAGCAGTTTACAGGACAGTGGCCCGAGTTTAATTCCTACTGCAACGGACCCGGCTTA
TGGGGTTTTCGACGCGGCCGTGATCGTCTTGCCCTAGCAGTCTAATTGGCTTCCTACCCAAAAATTACAAAACAAGAGAC
GCGTCCGAGCAGCAGACGCACATTTTCTTTGCTTGAGTACTCCAATAATATCCTAAGCGCAATTAGAAAAGATCTCAAAA
GTTGGTCAGTGTGTAGGCGCTTGTGGGAGGGAGCACATGGCTTTTGGCAAAGCAGAAAACAGTGCCTTCCTCGTTTTTGA
AATAAAGCCTGATGGTGAAATGAACCATAGTGAAATGCGAGCCCACTTTGTGAAAGCTGATCAGTGCTCTGACTGTTCTA
CAGTTCCTTTTTGGCTCTTCTTTTGGGGATTACACATCTTCTAGATCTTTCTTCACATGTTTG-TGTTGGTTTTGCTTTT
TCTTGGTTTCTCTCAGAAACTCTTCTCCTTTTAATGATTAAGCTGA
>chr5B_1
GACAACTTTATTGCAGATTTCGTATGAACAAGACTACTGCCATTGCTCCCCTAGATTGTGTTTAAGATTCTTTGGATCCA
AACATTTCCCTTTCTAAAAAGGGAAAGGAAAACACTGATCGATTAGCAGCAGCCAACATGTAACTGATGGGCAGGTTCGA
TGTACATAACCGGAGG---------GAGCTTACTTGCATCTGTTTGTCTGCTAAGCTTGCGTTCTGGGAGCAGGGTTTCA
GTTGACATTCACAACTGTGCTGACCTTGCATAACAAGCAGTAGTTGACTATGGAAGTTATTGTGATACCCCTGTACAAGT
AATTGGTGCTGACTTTTCTACCTCCACAAATAAAATATAACCTAATGTTTGACATTGGCTTAGTTAGGTGCCCTACATGC
TCTGTTTACGTTATCCCTAAACGGCTAAACCAGACAAGCCATGTTGTGTCAACAAAGCAAACATTGCAGATACATGCTGT
GCTTACCATGTTGTGTTACTCAGT--------------------------------------------------------
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--------TTTTGTCAACCCTTTGGTGGACATATAGGAATGGTTTGCGCCGGCGATATTTTTGAGCTGTTTAATCCTTGA
ATGGAAAACTAAAATTAGGTATATGCACTATAACATGAGATTTCTTTGGTACCCATGGTAGTGGCTCTATCTGGTATCCC
ATTGGGAGCTTAGTCATCCTTATCATAAACTTCTTTTATTTATCCATCATGCGGTGCAGATGATACTGCAATGCGATTAC
CCTATTATTTATCATCGGGTCAATCCGGCGTCAGGAAATTGAACTTAGATTACTCCAGGATCACATAAGACTTTCTTTTC
TTTATGCAGACATGGACGCAGCGATAAGTTAGTTTATGGAAATATGTGCACAAGCATGGCGTTGAAAGAACCCTCATCAG
CTGACACAGGGGCATGGCAACT-GCCTATATAAACCATACTACTACAAACTCCAAAAACCACAACACAAACCAGAGTCTG
GGATTCCAAACCCAAGAAGCTACCACATTTCTAGATCATCAGAAGATGAGGGTGGGTGCTCATGATCTGAAGCTCAAGGG
GCTCAAGAGGTCTCTCAAGGAGCACAAGGCCAGGCTCTACATCATCCGTCGCTGCGTCGTGATGCTCCTAAGCTGGCATG
ACTGATCAAGCGATTCGGAGTGAATTTCTTCACAGCTTCTCTTACTTCTCTATCTGACTGGCCAACCTAGTGGCTGAAAT
TTTGGGTCTCTATCTCTGATGTATGTAACAGCTGTATATAACCTGTCAAAGTAGGAAGACTGGAAATGAAAGGCAACTTC
TTTCTTGATGTGGTATCTCCAGAAATAATCTGAGGTTTATACCCCTTTGTCCCTTTTCTTCTTCTAAAACATGGCATGCA
TTTTGATGTGTGTTCGAGAAAAAAAAAGGAAATCAAAATTTTCTTGGCGCCGGGAACA-----TAATCTAGCATATACCA
CAGGTGCAGTGGAGGGAGGTGAGACCAGCAGATTTGATATGGAATTTGTCATCCC-ATCATTAGTTGGTACCATTTCCAA
GTCCGAGGCTGATGGCTTTTGATGCTTGATGCTCAATGCACCGATTTCTCTGAATGTTCAC-CTCACTCTCCTCTTATCA
AACCTGCACCGAGTGTGATATCTCAGCAGTTTACAGGACAGTGGCCCGAGTTTAATTCCTACTGCAACGGACCCGGTTTA
TGGGGTTTTCGACGCGACCATGATCGGCTTGCCCTAGCAGTCTAATTAGCTCCCTACCCCAAAATTACAAAACAAGAGAC
GCGTCCGAGCAGCGGACACACA-TTTCTTTGCTTGAGTACACCAATAATATCCTAACCACAATTAGAAAAGATCTCAAAA
GCTGGTCAGTGTGTAGGTGCTTGTGGGAGGGAGCACATAGCTTTTGCCAAAGCACAAAACAGTGCCTTCCTCGTTTTTGA
AATAAAGGCTGATGGTGAAATGAACCATAGTGAAATGCGAGCCCACTTTGTGAAAGCTGATCAGTGCTCTGACTGTTCTA
CAGTTCCTTTTTGGCTCTTCTTTTGGGGATTACACATCTTCTAGATCTTTCTTCACATGTTTG-TGTTGGTTTTGCTTTT
-CTTGGTTTCTCTCAGAAACTCTTCGCCTTTGAATGATTAAGCTGA
>chr5D_1
GACAACTTTATTGCAGATTTCGTACGAACAAGACTACTGCCATTGCTCCCCTAGATTGTGTTTAAGATTCTTTGGATCCA
AACG------TTTCTAAAAAGGGAAAGGAAAACACTGATCGATTAGCAGCAGCCAACATGTAACTGACGGGCAGGTTCGA
TGTACATAACCGGAGGGTTTATTTAGAGCTTACTTGCATCTGTTTGTCTGCTAAGCTTGCGTTTTGGGAGCAGGGTTTCA
GTTGACATTCACAACTATGCTGACCTTGCATAACAAGTGGTGGTTGACTATGGAAGTTATTGTGATACCCCTGTACAAGT
CATTGGTGCTGACTTTCCTACCTCCTCAAATAAAATATAACCTAATGTTTGACATTGGCTTAGTTAGGTGCCCTACATGC
TCTGTTTACGTTATCCCTAAACGGCTAAACCAGACAAGCCATGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNATATATTACCACTCAAATGGAAGGTCAGAGAATTACAGCAGAGGTTCTGGTACAAATTCAGCTAGAAGGGAATTCTG
GTACTTAGTTTTGTGAACCTTTTGGTGGACAGATAGGAATGGCTTGTGCCGGTGATATCTTTTAGCTGTTCAATCCTTGA
ATGGAAAATTAAAATTAGGTATCTGCACTATAACATGAGATTTCTTTGGTACCCATGGTAGTGGCTCTATCTGGTATCCC
ATTGGGAGCTTAGTCATCCTTATCATAAACCTCTTTTATTTATCCATCGTGCAGTGCAGATGATACCGCAATGTGATTAC
CCTATTATTTATCATCGGGTCAATCCGGCGTCAGGAAATTGAACTTAGATTACTCCAGGATCACATAAGACTTTCTTTTC
TTTATGCAGACATGGACGCAGCGATAAGTTAGTTTATGGAAATATGTGCACAACCATGACATTGAAAGAAGCCTCATCAG
CTGACACAGCCCACACAGAAGCCGCCTATATAAACCGTACTACTACAAACTCCAAAAACC-CAACACAGACCAGAGTTTG
GGATTCCAAATCCAAGAGGCAACCACATTTCTAGATCATCAGAAGATGAGGGTGGGCGCTCATGATCTGAAGCTCAAGGG
GCTCAAGAGGTCTCTCAAGGAGCACAAGGCCAGGCTCTACATCATCCGTCGATGCGTCGTGATGCTCCTAAGATGGCATG
ATTGATCAAGCAATTTGGAGTGAATTTCTTCACAGTTTCTCTTACTTCTCTATCTGACTGGCCAGCCTAGTGGCTGAAAT
TTTGGGTCTCTATCTCTGATGTATGTAACAGCTGTATATAACCTGTCAAAGTAGGAAGACTGGAAATGAAAGGCAACTTC
TTTCTTGATGTGGTATCTCCAGAAATAATCTGAGGCTTATACCCTTTTGTCCCTTTTCTTCGTCTAAAACATGACATGCA
TTTTGATGTGTGTTCGAGAAAAAAAAAGGAAATCAAAATTTTCTTGGCGCCGGGAACA-----TAATCTAGCATATACCA
CAGGTGCAGTGCAGGGAGGTGAGACCAACAGATTTGATATGGAATTTGTCATCCC-ATCATTAGTTGGTACCATTTCCAA
GTCCGAGGCTGATGGCTTTTGATGCTTGATGCTCAATGCACCGATTTCTCTGAATGTTCAC-CTCACTCTCCTCTTATCA
AACCTGCACCGAGTGTGATATCTCAGCAGTTTACAAGACAGTGGCCCGAGTTTAATTCCTACTGCAACGGACCCGGCTTA
TGGGGTTTTCGACGCGACTGTGATCGGCTTGCCCTAGCAGTCTAATTAGCTTCCTACCCCAAAATTACAAAACAAGAGAC
GCGTCCGAGCAACAGACACACA-TTTCTTTGCTTGAGTACTCCAATAATATCCTAACCGCAATTAGAAAAGATCTCAAAA
GTTGGTCAGTGTGTAGGCGCTTGTGGGAGGGAGCACATGGCTTTTGGCAAAGCACAAAACAGTGCCTTCCTCGTTCTTGA
AATAAAGCCTGATGGTGAAATGAGCCATAGTGAAATGCGAGCCCACTTTGTGAAAGCTGATCAGTGCTCTGACTGTTCTA
CAGTTCCTTTTTGGCTCTTCTTTTGGGGATTGCACATCTTCTAGATCTTTCTTCACATGTTTGGTGCTGGTTTTGCTTTT
-CTTGATTTCTCTCAGAAACTCTTCTCCTTTTAATGATTAAGCTGA
>SNPs
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--------------------------------------------S----------------------------------S
----------S---S-----------------------------------------------------------------
---------------------------------------------------S---------------S------------
------------------------------------------------------------------------S-------
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---------S----------------------------------------------------------------------
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---S----------------------------------------------------------------------------
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-------------------------------------------------------------------------S------
-------------------------------------------------------------------------------S
---------------S-----S-------------S--------------------------------------------
---------------------S-----------S-------------------S--------------------------
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--------------------------------------------------------S-------------S---------
--------------------------SS--------------------S---SS--S------------S----------
--------S-----S-------S---------S----S---S------SSSS----S-SSSSS--S-S-----SS-----
---------------------------------------------------S---S------------------------
---S--------------------------S-------------------------S----S------------------
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----------------S---------S--------------------S-----------S--------------------
-----------------S----S---------------------------------S-----------------------
------------------------------------------------------S-------------------------
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S---------------------------------------------
>forward_1136
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----------------------------------------------------------------------------TCAA
CTGACACAGCCCACAT----------------------------------------------------------------
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>reverse_2135
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------------------------------------------------------GAAAACAGTGCCTTCCTCGT------
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