>input_sequence_87509
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-------------------------------------------------------------ATGACCATAGATCGAACCT
ATCCTATTTTTACAGTGCGATGGCTGGCTATTCACGGACTAGCTGTACCTACAGTC-TTTTTCTTGGGATCAATATCAAC
AATGCAGTTCATCCAACGATAA----------------------------------------------------------
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------------
>chr1D_1_TraesCS1D01G170500
TTTGACCACAGTTTGACCACAGTTTGACCAGATTTGACCGAAATTCAAAATAACTGAAATAATTATTTAGTAACACTAAT
ATTCTAGAATAATTAGTTTGACCATTGTTTGACCACAGTTTGAAATTTTTCGATTTTTTCCACTCTAGATCTTAAAAGCC
CCGTAACTTTTTTTCTGTTAGGTTTTTGAGGATTTTGAAAATGTTTAACGGGGTCCCCCTGCTCCATGCGGATCGGTGTG
CCACAAGAAAGTTAGACCTAATCCAACAAATAATACAAATATGAATTACCAATTATGAATGGATATATTTCACATATACT
TGTCCTTGTATTATGTCAATATGAGAATATCCTTCCTAAATTATTTATCCAAACCTATTGATCATTAACTTAGATTTTTC
CCAAGATTTTGGCTGCTATTCCGAATTACTCTATTATTCTGAAGCCAATGAAAAGTAAGTAGAACCTACAAAAAAGGGGT
TTTCTATTGATGCCTTGAATAACATATAGTTTACCTATTGACAA-------AATA--------ATAA-----TTATTATT
TTTCGGAACCAGGCAAAACCAGATTTTTGTGCCATAGGAAGGATAGCTATACTAATTCGCTATACTCAAAATACACCTTT
GGTACAAAATTGACAATCTCACAAGGATGAAATATCAGTAATTTTCTATTTACTGGTCGATCCCATCTTTTACGGAATCA
ATTCCTTTTTTGAATGTACAAAATTTTTGGGAGTTCAGCATGTCTGGAAGCACGGGAGAACGTTCTTTTG-TGATAGTAT
TACCAATATTCGATACCGGGTTATTCATAGCATTACTATACATTCCATATTCATTGCGGGTTGGTTATTTGTCAGTACGG
GTTTAGCTTATGACGTGTTTGCATGTCCTAGGCCAAACGAGTATTTCACGGAAAGCCGACAAGGAATTCTGTTAATAACC
GACCGTTTTGATTCTTTAGAACAACTCGATGAATTTAGTAGATCCTTTTAGGAGGCCCTCAATGACCATAGATCGAACCT
ATCCTATTTTTACAGTGCGATGGCTGGCTATTCACGGACTAGCTGTACCTACAGTC-TTTTTCTTGGGATCAATATCAAC
AATGCAGTTCATCCAACGATAAACCAAATTCCAACTATAGAACTATGACACAATCAAACCCGAATG-AACAAAATGTTGA
ATTGAATCATACCAGTCTATACTGGGGTTTATTACTCATTTTTGTACTTGCTGCTTAATTTTCCAATTACTTCTTCAATT
GAGAGAAAGAAAGAGACTAATAAGAATTCTCTTATCTCATTTGGAAGGATACCATCCTTATAACTACCCATGACTATTTT
CGTCTCTTGCATGACCAATTGATAGAATGTGGAGGAAAGTAGGGGAAATGGCCGATACTACTGGAAGAATTTCTCTTTGG
CTGATAGGTACTATAGATGGTATTGCTGTGATTGGTTTAGTAGGTGTTTTCTTTTATGGTTCATATTCTGGATTGGGTTC
ATCCCTATAGTAATCGGAGGGACTAGATTGTAAACATGAAAAAGCAGGAGCTTAGCGGGTCCTTACCCCCCTTTATTTGA
TTAGAGCGGAAAGGACCCGCGGAATTTTTACTCTTATAACGCGAATTGAATCTATTCGATTCACTCTTATGAAGCAACAA
GAAAAAGAGATCACTCGAGGATCTAATATCTTATTCCACGAAGGAAGTATCCTGAAAATCCTTGATTTAGTTTCGAGTAA
TAAACTAATAAAACCTTAATCAAAACTATTCAACTAGCC------TAAAAG----------AAAA-CCTTCAATGGAAGA
GTTTAC--TTTTTTTTTGCAAAATTTCTGTAAATTTGAAGTTGAACTTAATTAATCAAGCCAAGCAATT-----TGCTCA
CAATCACAAGAAATTTGTCCCCCGCCATATTTTC-TCCCCTCTGTTTGTCCACTACCTCGACTAAACCTAAGCAAAAGAA
AAAGAGGTCCAAGAGACAGACCCGAATAAAGAAGAAATAGTAA----TCTTTGATGAATTAGGAAGAAAAAGGATTCTTA
TTTTGATACAAGAAGAATCGGCACAAGAAAAAGCCTTTTTCTTGTGCAGAATAGACGATTAAGAAGACCCGCAATCCCTC
CGAAAAGGAAGA
>chr1D_1
TTTGACCATAGTTTGACCACAGTTTGACCAGATTTAACCAAAATTCAAAATAACTGAAATAATTATTTAGTAACACTAAT
ATTCTAGAATAATTAGTTTGACCATTGTTTGACCACAGTTTGAAATTTTTCGATTTTTTGCACTCTAGATCTTAAAAGCC
CCGTAACTTTTTTTCTGTTAGGTTTTTGAGGATTTTGAAAATGTTTAACGGGGTCCCCCTGCTCCATGCGGATCGGTGTG
CCACAAGAAAGTTAGACCTAATCCAACAAACAATACAAATATGAATTACCAATTATGAATGGATATATGTCACATATACT
TGTCCTTGTATTATGTCAATATGAGAATATCCTTCCTAAATTATTTATCCAAACCTATTGATCATTAACTTAGATTTT-C
CCAAGATTTTGGCTGCTATTCCGAATTACTCTATTATTCTGAAGCCAATGAAAAGTAAGTAGAACCTACAAAAAAGGGGT
TTTCTATTGATGCCTTGAATAACATATAGTTTACCTATTGACAA-------AATA--------ATAA-----TAATTATG
TTTCGGAACCAGGCAAAACCAGATTTTTGTGCCATAGGAAGGATAGCTATACTAATTCGCTATACTCAAAATACACCTTT
GGTACAAAATTGACAATCTCACAAGGATGAAATATCAGTAATTTTCTATTTACTGGTCGATCCCATCTTTTACGGAATCA
ATTCCTTTTTTGAATGTACAAAAATTTTGCGAGTTCAGCATGTCTGGAAGCACGGGAGAACGTTCTTTTG-TGATAGTAT
TACCAATAGTCGATACCGGGTTATTCATAGCATTACTATACATTCCATATTCATTGCGGGTTGGTTATTTGTCAGTACGG
GTTTAGCTTATGACGTGTTTGCATGTCCTAGGCCAAACGAGTATTTCACGGAAAGCCGACAAGGAATTCTGTTAATAACT
GACTGTTTTGATTCTTTAGAACAACTCGATGAATTTAGTAGATCCTTTTAGGAGGCCCTCAATGACCATAGATCGAACCT
ATCCTATTTTTACAGTGCGATGGCTGGCTATTCACGGACTAGCTGTACCTACAGTC-TTTTTCTTGGGATCAATATCAAC
AATGCAGTTCATCCAACGATAAACCAAATTCCAACTATAGAACTATGACACAATCAAACCCGAATG-AACAAAATGTTGA
ATTGAATCATACCAGTCTATACTGGG-TTTATTACTCATTTTTGTACTTGCTGCTTAATTTTCCAATTACTTCTTCAATT
GAGAGAAAGAAAGAGACTAATAAGAATTCTCTTATCTCATTTGGAAGGTTACCATCCTTATAACTACTCATGACTGTTTT
TGTCTCTTGCATGACCAATTGATAGAATGTGGAGGAAAGTAGTGGAAATGGCCGATACTACTGGAAAAATTTCTCTTTGG
CTGATAGGTACTATAGCTGGTATTGCTGTGATTGGTTTAGTAGGTGTTTTCTTTTATGGTTCATATTCTGGATTGGGTTC
ATCTCTATAGTAATCGGAGGGACTAGATTGTAAACATGAAAAAGCAGGAGCTTAGGGGGTCCTTACCCCCCTTTATTTGA
TTAGAGCGGAAAGGACCCGCGGAATTTTTACTCTTATAACGCGAATTGAATCTATTCGATTCACTCTTATGAAGCAACAA
GAAAAAGAGATCACTCGAGGATCTAATATCTTATTCCACGAAGGAAGTATCCTGAAAATCCTTGATTTAGTTTCGAGTAA
TAAACTAATAAAACCTTAATCAAAACTATTCAACTAGCCTAAAAG-----------A------AAACCTTCAATGGAAGA
GTTTAC-TTTTTTTTTTGCAAAATTTCTGTAAATTTGAAGTTGAACTTAATTAAACAAGCCAAGCAATT-----TGCTCA
CAATCACAAGAAATTTGTCCCCCGCCATATTTTC-TCCCCTCTGTTTGTCCACTACCTCGACTAAACCTAAGCAAAACAA
AAAGAGGTCCAAGAGACAGACCCGAATAAAGAAGAAATAGTAA----TCTTTGATGAATTAGGAAGAAAAAGGATTCTTA
TTTTGATACAAGAAGAATCCGCACAAGAAAAAGCCTTTTTCTTGTGCAGAATAGACGATTAAGAAGACCCGCAATCCCTC
CGAAAAGGAAGA
>chr1D_215
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------CCCCCTGCTCCATGCGGATCTGTGTG
CCACAAGAAAGTTAGACCTAATCCAACAAACAATTCAAATATGAATTACCAATTATGAAAGGATATATTTCACATATACT
TGTCCTTGTACTATGTCAATATGAGAATATCCTTCCTAAATTATTTATCCAAACCTATTGATCATTAACTTAGAT-TTTC
CCAAGATTTTGGCTGCTATTCCGAATTACTCTATTATTCTGAAGCCAATGAAAAGTAAGTAGAACCTACAAAAAAGGGGT
TTTCTATTGATGCCTTGAATAACATATAGTTTACCTATTGACAA-------AATA--------ATAA-----TAATTATG
TTTCGGAACCAGGCAAAACCAGATTTTTGTCCCATAGGAAGGATAGCTATACTAATTCGCTATACTCAAAATACACCTTT
GGTCCAAAATTGACAATCTCAAAAGGATGAAATATAAGTAATTTTCTATTTACTGGTCGATCCCATCTTTTACGGAATCA
ATTCCTTTTTTGAATGTACAAAATTTTTGGGAGTTCAGCATGTCTGGAAGCACGGGAGAACGTTCTTTTG-TGATAGTAT
TACCAATATTCCATACTGGGTTATTCATAGCATTACTATACATTCCCTATTCATTGCGGGTTGGTTATTTGTCAGTACGG
GTTTAGCTTATGACATGTTTGCAAGTCCTAGGCCAAACGAGTATTTCACGGAAAGCCGACAAGGAATTCAGTTAATAACC
GACCGTTTTGATTCTTTAGAACAACTCGATGAATTTACTAGATCCTTTTAGGAGGCCCTCAATGACCATAGATCGAACCT
GTCCTGTTTTTACAGTGCGATGGCTGGCTATTCGCGGACTAGCTGTACCTATAGTC-TTTTTCTTGGGATCAATATCAAC
AATGTAGTTCATCCAACGATAAACCAAATTCCAACTATAGAACTATGACACAATCAAACCCGAATG-AACAAAATGCTGA
ATTGAATCGTACCAGTCTATACTGGG-TTTATTACTCATTTTTGTACTTGCTGCTTAATTTTCCAATTACTTCTTCAATT
GAGAGAAAGAAAGAGACTAATAAGAATTCTCGTATCTAAATTGGAAGGATACCATCCTTATAACTACCCATGACTGTTTT
TGTCTCTTGCATGACCAATTGATAGAATGTGGAGGAAAGTAGGGGAAATGGCCGATACTACTGGAAGAATTTCTCTTTGG
CTGATAGGTACTAATGCTGGTATTGCTGTGATTGGTTTAGTAGGTGTTTTCTTTTATGGTTCATATTCTGGATTGGGTTC
ATCTCTATAGTAATCGGAGGGACTAGATTGTGAACATGAAAAAGCAGGAGCTTAGCGGGTCCTTACCCCCCTTTATCTGA
TTAGAGCGGAGAGGACCCGCGGAATTTTTACTCTTATAACGCGAATTGAATCTATTCGATTCACTCTTCTGAAGCAACAA
GAAAAAGAGATCACTCGAGGATCTAATATCTCATTGCACGAAGGAAGTATCCTAAAAATCCTTGATTTAGTTTCGAGTAA
TAAACTAATAAAACCTTAATCAAAACTATCCAACTAGCCTAAAAG-----------A------AAACCTTCAATGTAACA
GTTTACTTTTTTTTTTTGCAAAATTTCTGTAAATTTGAAGTTGAACTTAATTAAACAAGCCAAGCAATT-----TGCTCA
CAATCACAAGAAATTTGTCCCCCGCCATATTTTCTCCCCCTCTGTTTGTCCACTACCTCGACTAAACCTAAGCAAAAGAA
AAAGAGGTCCAAGAGACAGACCCGAATAAAGAAGAAATAGTAA----TCTTTGACGAATTAGGAAGGAAAAGGATTCTTA
TTTTGATACAAGAAGAATCAGCACAAGAAAAAGCCTTTTTCTTGTGCCGAATAGACGATTAAGAAGACCCGCAATCCCTC
CGAAAAGGAAGA
>chr2D_244
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---CAAGAAAGTTAGACCTAATCCAACAAACAATACAAGGATGAATTACGAATTATGAAAGGATAGATTTCACATATACT
TGTCCTTGTATTGTGTCAGTATGAGAATATCCTTCCTAAATTATTTATCCAAACCTATTGATCATTAACTTAGAT-TTTC
CCAAGATTTTGGCTGCTATTCCGAATTACTCTATTATTCCGAAGCCAATGAAAAGTAAGTAGAACCTACAAAAATGGGGT
TTTCTATTGATGCCTTGAATAACATATAGCTTACCTATAGACAA----------------------AAAAAGTAATTATG
TTTCGGAACCAGGCAAAACCAGATTGCTGTGCCATAGGAAGGATAGCTATACTAATTCGGTATACTCAAAATACACCTTT
GGTACAAAATTGACAATCTCACAAGGATGAAATATCAGTAATTTTCTATTTACTGGTCGATCCCATCTTTTACGGAATCA
ATTCCTTTTTTGAATGTACAAAAATTTTGGGAGTTCAGCATGTCTGGAAGCACGGGAGAACGTTCTTTTGCTGATATTAT
TACCAGTATTCGATACTGGGTTATTCATAGCATTACTATACCTTCCCTATTCATTGCGGGTTGGTTATTTGTCAGTACGG
GTTTAGCTTATGACGTGTTTGGAAGTCCTAGGCCAAACGAGTATTTCACGGAAAGCCGACAAGGAATTCCGTTAATAACC
GACCGTTTTGATTCTTTAGAACAACTCGACGAATTTAGTAGATCCTTTTAGGAGGCCCTCAATGACCATAGATCGAACCT
ATCCTATTTTTACAGTGCGATGGCTGGCTATTCACGGACTAGCTGTACCTACTGTT-TTTTTCTTGGGATCAATATCAGC
AATGCAGTTCATCCAACGATAAACCAAATTCCAACTATAGAACTATGACACAATCAAACCCGAATG-AACAAAATGTTGA
ATTGAATCGTACCAGTCTATACTGGGGTTTATTACTCATTTTTGTACTTGCTGTTTTATTTTCCAATTACTTCTTCAATT
GAGAGAAAGAAAGAGACTAATAAGAATTCTCTTATCCCATTTGGAAGGATACCATCCTTATAACTACCCATGACTGTTTT
TGTCTCTAGCATGACCAATTGATAAAATGTGGAGGAAAGTAGGGGAAATGGCCGATACTACTGGAAGAATTCCTCTTTGG
CTGATAGGTACTGTAGCTGGTATTGCTGTGATTGGTTTAGTAGGTGTTTTCTTTTATGGTTCATATTCTGGATTGGGTTC
ATCTCTATAGTAATCGGAGGGACCAGATTGTAAACATGAAAAAGTAGGAGCTTAGCGGGTCCTTACCCCCCTTTATCTGA
TTAGAGCGGAAAGGACCCGCGGAATTTTTACTCTTATAACGCGAATTGAATCTATTCGATTCACTCTTATGAAGCAACAA
GAAAAAGAGATCACTCGAGGATCCAATATCTTATTCCACGAAGGAAGTATCCTGAAAATCCTTGATTTAGTTTCGAGTAA
TAAACTAATAAAACCTTAATCAAAACTATTCAACTAGCC------TAAAAATAAAAA------AAACCTTCAATGGAAGA
GTTTAC-TTTTTTTTTTGCAAAATTTCTGTAAATTTGAAGTTGAACTTAATTAAACAAGCCAAGCAATT-----TGCTCA
CAATCACAAGAAATTTTTCCCCCGCCATATTTTCTTCCCCTCTGTTTGTCCACTACCTCGGCTAAACCTAAGCAAAAGAA
AAAGAGGTCCAAGAGACAGACCCGAATAAAGAAGAAATAGTAA----TCTTTGACGAATTAGGAAGAAAAAGGATTCTTA
TTTTGATACAAGAAGAATCGGCACAAGAAAAAGCCTTTTTCTTGTGCCGAATAGACGATTAAGAAGACCTGCAATCCCTC
CGAAAAGGAAGA
>chr6D_244
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---CAAGAAAGTTAGACCTAATCCAACAAACAATACAAGGATGAATTACGAATTATGAAAGGATAGATTTCACATATACT
TGTCCTTGTATTGTGTCAGTATGAGAATATCCTTCCTAAATTATTTATCCAAACCTATTGATCATTAACTTAGAT-TTTC
CCAAGATTTTGGCTGCTATTCCGAATTACTCTATTATTCCGAAGCCAATGAAAAGTAAGTAGAACCTACAAAAATGGGGT
TTTCTATTGATGCCTTGAATAACATATAGCTTACCTATAGACAA--------------AAAAAATAAAAAAGTAATTATG
TTTCGGAACCAGGCAAAACCAGATTGCTGTGCCATAGGAAGGATAGCTATACTAATTCGGTATACTCAAAATACACCTTT
GGTACAAAATTGACAATCTCACAAGGATGAAATATCAGTAATTTTCTATTTACTGGTCGATCCCATCTTTTACGGAATCA
ATTCCTTTTTTGAATGTACAAAAATTTTGGGAGTTCAGCATGTCTGGAAGCACGGGAGAACGTTCTTTTGCTGATATTAT
TACCAGTATTCGATACTGGGTTATTCATAGCATTACTATACCTTCCCTATTCATTGCGGGTTGGTTATTTGTCAGTACGG
GTTTAGCTTATGACGTGTTTGGAAGTCCTAGGCCAAACGAGTATTTCACGGAAGGCCGACAAGGAATTCCGTTAATAACC
GACCGTTCTGATTCTTTAGAACAACTCGATGAATTTAGTAGATCCTTTTAGGAGGCCCTCAATGACCATAGATCGAACCT
ATCCTATTTTTACAGTGCGATGGCTGGCTATTCACGGACTAGCTGTACCTACTGTT-TTTTTCTTGGGATCAATATCAGC
AATGCAGTTCATCCAACGATAAAACAAATTCCAACTATAGAACTATGACACAATCAAACCCGAATG-AACAAAATGTTGA
ATTGAATCATACCAGTATATACTGGGGTTTATTACTCATTTTTGTACTTGTTGTTTTATTTTCCAATTACTTCTTCAATT
GAGAGAAAGAAAGAGACTAATAAGAATTCTCTTATCCCATTTGGAAGGATACCATCCTTATAACTACCCATGACTGTTTT
TGTCTCTAGCATGACCAATTGATAAAATGTGGAGGAAAGTAGGGGAAATGGCCGATACTACTGGAAGAATTCCTCTTTGG
CTGATAGGTACTGTAGCTGGTATTGCTGTGATTGGTTTAGTAGGTGTTTTCTTTTATGGTTCATATTCTGGATTGGGTTC
ATCTCTATAGTAATCGGAGGGACCAGATTGTAAACATGAAAAAGTAAGAGCTTAGCGGGTCCTTACCCCCCTTTATCTGA
TTAGAGCGGAAAGGACCCGCGGAATTTTTACTCTTATAACGCGAATTGAATCTATTCGATTCACTCTTATGAAGCAACAA
GAAAAAGAGATCACTCGAGGATCCAATATCTTATTCCACGAAGGAAGTATCCTGAAAATCCTTGATTTAGTTTCGAGTAA
TAAACTAATAAAACCTTAATCAAAACTATTCAATTAGCCTAAAAATA------AAAA------AAACCTTCAATGGAAGA
GTTTAC-TTTTTTTTTTGCAAAATTTCTGTAAATTTGAAGTTGAACTTAATTAAACAAGCCAAGCAATT-----TGCTCA
CAATCACAAGAAATTTTTCCCCCGCCATATTTTCTTCCCCTCTGTTTGTCCACTACCTCGGCTAAACCTAAGCAAAAGAA
AAAGAGGTCCAAGAGACAGACCCGAATAAAGAAGAAATAGTAA----T----GACGAATTAGGAAGAAAAAGGATTCTTA
TTTTGATACAAGAAGAATCGGCACAAGAAAAAGGCTTTTTCTTGTGCCGAATAGACGATTAAGAAGACCTGCAATCCCTC
CGAAAAGGAAGA
>chr3D_244
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---CAAGAAAGTTAGACCTAATCCAACAAACAATACATAGATGAATTACGAA-TATGAAAGGATAGATTTCACATATACT
TGTCCTTGTATTGTGTCAGTATGAGAATATCCTTCCTAAATTATTTATCCAAACCTATTGATCATTAACATAGAT-TTTC
CCAAGATTTTGGCTGCTATTCCGAATTACTCTATTATTCCGAAGCCAATGAAAAGTAAGTAGAACCTACAAAAATGGGGT
TTTCTATTGATGCCTTGAACAACATATAGCTTACCTATAGACAA-------AAAA--------ATAAAAAAGTAATTCTG
TTTCGGAACCAGGCAAAACCAGATTGATGTGCCATAGGAAGGATAGCTATACTAATTCGGTATACTCAAAATACACCTTT
GGTACAAAATTGACAATCTCACAAGGATGAAATATCAGTAATTTTCTATTTACTGGTCGATCCCATCTTTTACAGAATCA
ATTCCTTTTTTGAATGTACAAAATTTTTGGGAGTTCAGCATGTCTGGAAGCACGGGAGAATGTTCTTTTGCTGATATTAT
TGCCAGTATTCGATACTGGGTTATTCATAGCATTACTATACCTTCCCTATTCATTGCGGGTTGGTTATTTGTCAGTACGG
GTTTAGCTTATGACGTGTTTGGAAGTCCTAGGCCAAACGAGTATTTCACGGAAAGCCGACAAGGAATTCCGTTAATAACC
GACCGTTTTGATTCTTTAGAACAACTCGATGAATTTAGTAGATCCTTTTAGGAGGCCCTCAATGACCATAGATCGAACCT
ATCCTATTTTTACAGTGCGATGGCTGGCTATTCACGGACTAGCTGTACCTACTGTT-TTTTTCTTGGGATAAATATCAGC
AATGCAGTTCATCCAACGATAAAACAAATTCCAACTATAGAACTATGACACAATCAAACCCGAATG-AACAAAATGTTGA
ATTGAATCGTACCAGTCTATACTGGGGTTTATTACTCATTTTTGTACTTGCTGTTTTATTTTCCAATTACTTCTTCAATT
GAGAGAAAGAAAGAGACTAATAAGAATTCTCTTATCCCATTTGGAAGGATACCATCCTTATAACTACCCATGACTGTTTT
TGTCTCTAGCATGACCAATTGATAAAATGTGGAGGAAAGTAGGGGAAATGGCCGATACTACTGGAAGAATTCCTCTTTGG
CTGATAGGTACTGTAGCTAGTACTGCTGTGATTGGTTTAGTAGGTGTTTTCTTTTATGGTTCATATTCTGGATTGGGTTC
ATCTCTATAGTAATCGGAGGGACCAGATTGTAAACATGAAAAAGTAGGAGCTTAGCGGGTCCTTACCCCCCTTTATCTGA
TTAGAGCGGAAAGGACCCGTGGAATTTTTACTCTTATAACGCGAATTGAATCTATTCGATTCACTCTTATGAAGCAACAA
GAAAAAGAGATCACTCGAGGATCCAATATCTTATTCCACGAAGGAAGTATCCTGAAAATCCTTGACTTAGTTTCGAGTAA
TAAACTAATAAAACCTTAATCAAAACTATTCAACTAGCC------TAAAAAT-AAAA------AAACCTTCAATGGAAGA
GTTTAC-TTTTTTTT--GCAAAATTTCTGTAAATTTGAAGTTGAACTTAATTAAACAAGCCAAGCAATT-----TGCTCA
CAATCACAAGAAATTTTTCCCCCGCCATATTTTCTTCCCCTCTGTTTGTCCACTACCTCGGCTAAACCTAAGCAAAATAA
AGAGAGGTCCAAGAGACAGACCCGAATAAAGAAGAAATAGTAATCTTT----GACGAATTAGGAATAAAAAGGATTCTTA
TTTTGATACAAGAAGAATCGACACAAGAAAAAGGCTTTTTCTTGTGCCGAATAGACGATTAAGAAGACCTGCAATCCCTC
CGAAAAGGAA--
>chr3B_244
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---CAAGAAAGTTAGGCCTAATCCAACAAACAATACAAGGATTAATTACGAATTATGAAAGGATAGATTTCACATATACT
TGTCCTTGTATTGTGTCAGTATGAGAATATCCTTCCTAAATTATTTATCCAAACCTATTGATCATTAACTTAGAT-TTTC
CCAAGATTTTGGCTGCTATTCCGAATTACTCTATTATTCCGAAGCCAATGAAAGGTAAGTAGAACCTACAAAAATGGGGT
TTTCTATTGATGCCTTGAATAACATATAGCTTACCTATAGACAA-------AAAATAAAAAAAATAAAAAAGTAATTATG
TTTCGGAACCAGGCAAAACCAGATTGTTGTGCCACAGGAAGGATAGCTATACTAATTCGGTATACTCAAAATACACCTTT
GGTAGAAAATTGACAATCTCATAAGGATGAAATATCAGTAATTTTCTATTTACTGGTCGATCCCATCTTTTACGGAATCA
ATTCCTTTTTTGAATGTACAAAAATTTTGGGAGTTCAGCATGTCTGGAAGCATGGGAGAATGTTCTTTTGCTGATATTAT
TACCAGTATTCGATACTGGGTTATTCATAGCATTACTATACCTTCCCTATTCATTGCGGGTTGGTTATTTGTCAGTACGG
GTTTAGCTTATGACGTGTTTGGAAGTCCTAGGCCAAACGAGTATTTCACGGAAAGCCGACAAGGAATTCCGTTAATAACC
GACCGTTTTGATTCTTTAGAACAACTCGATGAATTTAGTAGATCCTTTTAGGAGGCCCTCAATGACCATAGATCGAACCT
ATCCTATTTTCACAGTGCGATGGCTGGCTATTCACGGACTAGCTGTACCTACTGTT-TTTTTCTTGGGATCAATATCAGC
AATGCGGTTCATCCAACGATAAACCAAATTCCAACTATAGAACTATGACACAATCAAACCCGAATGAAACAAAATGTTGA
ATTGAATCGTACCAGTCTATACTGGGGTTTATTACTCATTTTTGTACTTGCTGTTTTATTTTCCAATTACTTCTTCAATT
GAGAGAAAGAAAGAGACTAATAAGAATTCTCTTATCCCATTTGGAAGGATACCGTCCTTATAACTACTCATGAATGTTTT
TGTCTCTAGCATGACCAATTGATAAAATGTGGAGGAAAGTAGGGGAAATGGCCGATACTACTGGAAGAATTCCTCTTTGG
CTGATAGGTACTGTAGCCGGTATTGCTGTGATTGGTTTAGTAGGTGTTTTCTTTTATGGTTCATATTCTGGATTGGGTTC
ATCTCGATAGTAATCGGAGGGACCAGATTGTAAACATGAAAAAGTAGGAGCTTAGCGGGTCCTTACCCCCCTTTATCTGA
TTAGAGCGGAAAGGACCCGCGGAATTTTTACTCTTATAACGCGAATTGATTCTATTCGATTCACTCTTATGAAGCAACAA
GAAAAAGAGATCACTCGAGGATCCAATATCTTATTCCACGAAGGAAGTATCCTGAAAATCCTTGATTTAGTTTCGAGTAA
TAAACTAATAAAACCTTAATCAAAACTATTCAACTAGCC------TA------AAAA------AAACCTTCAATGGAAGA
GTTTAC-TTTTTTTTT-GCAAAATTTCTGTAAATTTGAAGTTAAACTTAATTAAACAAGCCAAGCAATTCTATTTGTTCA
CAATCACAAGAAATTTGTCCCCCGCCATATTTTCTTCCCCTCTGTTTTTCCACTACCTCGGCTAAACCTAAGCAAAAGAA
AAAGAGGTCCAAGAGACAGACCCGAATAAAGAAGAAATAGTAATCTTT----GACGAATTAGGAAGAAAAAGGATTCTTA
TTTTGATACAAGAAGAATCGGCACAAGAAAAAGCCTTTTTCTTGTGCCGAATAGACGATTAAGAAGACCTGCAATCCCTC
CAAAAAGGAAGA
>chr2A_244
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---CAAGAAAGTTAGACCTAATCCAACAAACAATACAAGGATGAATTACGAATTATGAAAGGATAGATTTCACATATACT
TGTCCTTGTATTGTGTCAGTATGAGAATATCCTTCCTAAATTATTTATCCAAACCTATTGATCATTAACTTAGAT-TTTC
CCAAGATTTTGGCTGCTATTCCGAATTACTCTATTATGCTGAAGCTACTGAAAAGTAAGTAGAACCTACAAAAATGGGGT
TTTCTATTGATGCCTTGAATAACATATAGCTTACCTATAGACAA-------AA-------------AAAAAGTAATTATG
TTTCGGAACCAGGCAAAACCAGATTGCTGTGCCATAGGAAGGATAGCTATACTAATTCGGTATACTCAAAATACGCCTTT
GGTACAAAATTGACAATCTCACAAGGATGAAATATCAGTAATTTTCTATTTACTGGTCGATCCCGTCTTTTACGGAATCA
ATTCCTTTATTGAATGTACAAAAATTTTGGGAGTTCAGCATGTCTGGAAGCACGGGAGAACGTTCTTTTGCTGATATTAT
TACCAGTATTCGATACTGGGTTATTCATAGCATTACTATACCTTCCCTATTCATTGCGGTTTG-TTATTTTTCAGTACAT
GTTTAGCTTATGACGTGTTTGGAAGTCCTAGGCCAAACGAGTATTTCACGGAAAGCCGACAAGGAATTCCATTAATAACC
GACCGTTTTGATTCTTTAGAACAACTCGATGAATTTAGTAGATCCTTTTAGGAGGCCCTCAATGACCATAGATCGAACCT
ATCCTATTTTTACAGTGCGATGGCTGGCTATTCACGGACTAGCTGTACCTACTGTT-TTTTTCTTGGGATCAATATTAGC
AATGCAGTTCATCCAACGATAAAACAAATTGCAACTATAGAACTATGACACAATCAAACCCGAATGAA-CAAAATGTTGA
ATTGAATCATACCAGTCTATAATGGGGTTTATTACTCATTTT-GTACTTACTGTTTTATTTTCCAATTACTTCTTTAATT
GAGAGAAAGAAAGAGACTAATAAGAATTCTCTTATCCCATTTGGAAGGATACCATCCTTATAACTACCCATGACTGTTTT
TGTCTCTAGCATGACCAATTGATAAAATATGGAGGAAAGTAGGGGAAATGGCCGATACTACTAGAAGAATTCCTCTTTGG
CTGATAGGTACTGTAGCCGGTATTGCTGTGATTGGTTTAGTAGGTGTTTTCTCTTATGGTTCATGTTCTGGATTGGGTTC
ATCTCTATAGTAATCGGAGGGACCAGATTGTAAACATGAAAAAGTAGGAGCTTAGCGGGTCCTTACCCCCCTTTATCTGA
TTAGAGCGGAAAGGACCCGCGGAATTTTTACTCTTATAATGCGAATTGAATCTATTCGATTCACTCTTATGAAGCAACAA
GAAAAAGAGATCACTCGAGGATCCAATATCTTATTCCACGAAGGAAGTATCCTGAAAATCCTTGATTTAGTTTCGAGTAA
TAAACTAATAAAATCTTAATCAAAACTATTCAACTAGCC------TA------AAAATAAAAAAA-CCTTCAATGGAAGA
GTATAC--TTTTTTTT-GCTAAATTTCTGTAAATTTGAAGTTGAACTTAATTAAACAAGCCATGCAATT-----TGCTCA
CAATCACAAGAAATTTTTCCCCCGCCATATTTTCTTCCCCTCTATTTGTCCACTACCTCGGCTAAACCTAAGCAAAATAA
AAAGAGGTCCAAGAGACAGACCCGAATAAAGAAGAAATAGTAATCTTT----GACGAATTAGGAAGAAAAAGGATTCTTA
TTTTGATACAAGAAGAATCGGCACAAGAAAAAGGCTTTTTCTTGTGCCGAATAGACGATTAAGAAGACCTGCAATCCCTC
CGAAAAAGAAGA
>chr5A_244
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---CAAGAAAGTTAGACCTAATCCAACAAACAATACAAGGATGAATTACGAATTATGAAAGGATAGATTTCACATATACT
TGTCCTTGTATTGTGTCAGTATGAGAATATCCTTCCTAAATTATTTATCCAAACCTATTGATCATTAACTTAGAT-TTTC
CCAAGATTTTGGCTGCTATTCCGAATTACTCTATTATTCCAAAGCCAATGAAAAGTAAGTAGAACATACAAAAATGGGGT
TTTCTATTGATGCCTTGAGTAACATATAGCTTACTTATAGACAA-------AA-------------AA-AAGTAATTATG
TTTCGGAACCAGGCAAAACCAGATTGCTGTGCCATAGGAAGGATAGCTATACTAATTCGGTATACTCAAAATACACCTTT
GGTACAAAATTGACAATCTCACAAGGATGAAATATCAGTAATTTTCTATTTACTGGTTGATCCCATCTTTTACGGAATCA
ATTCCTTTTTTGAATGTACAAAAATTTTGGGAGTTCAGCATGTCTGGAAGATCGGGAGAACGTTCTTTTGCTGATATTAT
CACCA------------GGGTTATTCATAGCATTACTATACCTTCCCTATTCATTGCGGGTTGGTTATTTGTCAGTACGG
GTTTAGCTTATGACGTGTTTGGAAGTCCTAGGCCAAACGAGTATTTCACGGAAAGCCGACAAGGAATTCCATTAATAACC
GACCATTTTGATTCTTTAGAACAACTCAATGAATTTAGTAGATCCTTTTAGGAGGCCCTCAATGACCATAGATCGAACCT
ATCCTATTTTTATAGTGCGATGGCTGGCTATTCACGGACTAGCTGTACCTACTGTT-TT-TTCTTGGGATCAATATCAGC
AATGCAGTTCATCCAACGATAAAACAAATTCCAACTATAGAACTATGACTCAATCAAACCTGAATG-AACAAAATGTTGA
ATTGAATCGTACCAGTCTATACTGGGGTTTATTACTCATTTTTGTACTTGTTGTTTTATTTTCCAATTACTTCTTCAATT
GAGAGAAAGAAAGAGACTAATAAGAATTCTCTTATCCCATTTGGAAGGATACCATCCTTATAACTACCCATGACTGTTTT
TGTCTCTAGCATGACCAATTGATAAAATGTGGAGGAAAGTAGGGGAAATGGCCGATACTTTTGGAAGAATTCCTCTTTGG
CTGGTAGGTACTGTAGCTGGTATTGCTGTGATTGGTTTAGTAGGTGTATTCTTTTATGGTTCATATTCTCGATTGGGTTC
ATCTCTATAGTAATCGGAGGGACCAGATTGTAAACATGAAAAAGTAGGAGCTTAGCGGGTCCATACCCCCCTTTATCTGA
TTAGAGCGGAAAGGACCCGTGGAATTTTTACTCTTATAACACGAATTGAATCTATTCGATTCACTCATATGAAGCAACAA
GAAAAAGAGATCACTCGAGGATCCAATATCTTATTCCACGAAGGAAGTATCCTGAAAATCCTTGATTTAGTTTCGAGTAA
TAAACTAATAAAACCTTAATCAAAACTATTCAACTAGCC------TA------AAAATAAAAAAAACCTTCAATGGAAGA
GTTTAC-TTTTTTTTT-GCAAAATTTTAGTAAATTTGAAGTTGAACTTAATTAAACAAGCCAAGCAATT-----TGCTCA
CAATCACAAGAAATTTTTCCCCCGCCATATTTTCTTCCCCTCTGTTTGTCCACTACCTCGGCTAAACCTAAGCAAAAGAA
AAAGAGGTCCAAGAGATAGACCCGAATAAAGAAGAAATAGTAATCTTT----GACGAATTAGGAAGAAAAAGGATTCTTA
TTTTGATACAAGAAGAATCGGCACAAGAAAAAGGCTTTTTCTTGTGCCGAATAGACGATTAAGAAGACCTGCAATCCCTC
CAAAAAAGAAGA
>chr1A_244
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---CAAGAAAGTTAGACCTAATCCAACAAACAATACAAGGATGAATTACGAATTATGAAAGGATAGATTTCACATATACT
TGTCCTTGTATTGTGTCAGTATGAGAATATCCTTCCTAAATTATTTATCCAAACCTATTGATCATTAACTTAGAT-TTTC
CCTAGATTTTGGCTGCTATTCCGAATTACTCTATTATTCCGAAACCAATGAAAAGTAAGTAGAACCTACAAAAATGGGGT
TTTCTATTGATGCCTTGAATAACATATAGCTTACCTATAGACAA-------AA-------------AA-AAGTAATTATG
TTTCGGAACCAGGCAAAACCAGATTGTTGTGCCATAGGAAGGATAGCTATACTAATTCGGTATACTCAAAATACACCTTT
GGTACAAAATTGACAATCTCACAAGGATGAAATATCAGTAATTTTCTATTTACTGGTCGATCCCATCTTTTACGGAATCA
ATTCCTTTTTTGAATGTACAAAAATTTTGGGAGTTCAGCATGTCTGGAAGCACGGGAGAACGTTCTTTTGCTGATATTAT
TACCAGTATCCGATACTGGGTTATTCATAGCATTACTATACCTTCCCTATTCATTGCGGGTTGGTTATTTGTCAGTACGG
GTTTAGCTTATGACGTGTTTGGAAGTCCTAGGCCAAACGAGTATTTCACGGAAAGCCGACAAGGAATTCCGTTAATAACT
GACCGTTTTGATTCTTTAGAACAACTCGATGAATTTAGTAGATCTTTTTAGGAGGCCCTCAATGACCATAGATCGAACCT
ATCCTATTTTTACAGTGCGATGGCTGGCTATTCACGGACTAGCTGTACCTACTGTT-TTTTTCTTGGGATCAATATCAGC
AATGCAGTTCATCCAACGATAAAACAAATTCCAACTATAGAACTATGACACAATCAAACCCGAATG-AACAAAATGTTGA
ATTGAATCGTACCAGTCTATACTGGGGTTTATTACTCATTTTTGTACTTGTTGTTTTATTTTCCAATTACTTCTTCAATT
GAGAGAAAGAAAGAGACTAACAAGAATTCTCTTATCCCATTTGGAAGGATACCATCCTTATAACTACCCATGACTGTTTT
TGTCTCTAGCATGACCAATTGATAAAATGTGGAGGAAAGTAGG-GAAATGGCCGATACTACTGGAAGAATTCCTCTTTGG
CTGATAGGTACTGTAGCTGGTATTGCTGTGATTGGTTTAGTAGGTGTTTTCTTTTATGGTTCATATTCTGGATTGGGTTC
ATCTGTATAGTAATCGGAGGGACCAGATTGTAAACATGAAAAAGTAGGAGCTTAGCGGGTCCTTACCCCCCTTTATCTAA
TTAGAGCGGAAAGGACCCGCGGAATTTTTACTCTTATAACGCGAATTGAATCTATTCGATTCACTCTTATGAAGCAACAA
GAAAAAGAGATCACTCGAGGATCCAATATCTTATTCCACGAAGGAAGTATCCTGAAAATCCTTGATTTAGTTTCGAGTAA
TAAACTAATAAAACCTTAATCAAA-CTATTCAACTAGCC------TA------AAAATAAAA-AAACCTTCAATGGAAGA
GTTTAC-TTTTTTTTT-GCAAAATTTCTGTAAATTTGAAGTTGAACTTAATTAAACAAGCCAAGCAATT-----TGCTCA
CAATCACAA-----------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------
>chr1D_246
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-----AGAAAGTTAGACCTAATCCAACAAACAATACAAGGATGAATTACGAATTATGAAAGGATAGATTTCACATATACT
TGTCCTTGTATTGTGTCAGTATGAGAATATCCTTCCTAAATTATTTATCCAAACCTATTGATCATTAACTTAGAT-TTTC
CCAAGATTTTGGCTGCTATTCCGAATTACTCTATTATTCCGAAGCCAATGAAAAGTAAGTAGAACCTACAAAAATGGGGT
TTTCTATTGATGCCTTGAATAACATATAGCTTACCTATAGACAAAAAAAATAA-------------AA-AAGTAATTATG
TTTCGGAACCAGGCAAAACCAGATTGCTGTGCCATAGGAAGGATAGCTATACTAATTCGGTATACTCAAAATACACCTTT
GGTACAAAATTGACAATCTCACAAGGATGAAATATCAGTAATTTTCTATTTACTGGTCGATCCCATCTTTTACGGAATCA
ATTCCTTTTTTGAATGTACAAAATTTTTGGGAGTTCAGCATGTCTGGAAGCACGGGAGAACATTCTTTTGCTGATATTAT
TTCCAGTATTCGATACTGGGTTATTCATAGCATTACTATACCTTCCCTATTCATTGCGGGTTGGTTATTTGTCAGTACGG
GTTTAGCTTATGACGTGTTTGGAAGTCCTAGGCCAAACGAGTATATCACGGAAAGTCGACAAGGAATTCCGTTAATAACC
GACCGTTTTGATTCTTTAGAACAACTCGATGAATTTAGTAGATCCTTTTAGGAGGCCCTCAATGACCATAGATCGAACCT
ATCCTATTTTTACAGTGCGATGGCTGGCTATTCACGGACTAGCTGTACCTACTGTTGTT-TTCTTGGGATCAATATCAGC
AATGCAGTTCATCCAACGATAAAACAAATTCCAACTATAGAACTATGACACAATCAAACCCGAATG-AACAAAATGTTGA
ATTGAATCGTACCAGTCTATACTGGGGTTTATTACTCATTTTTGTACTTGCTGTTTTATTTTCCAATTACTTCTTCAATT
GAGAGAAAGAAAGAGACTAATAAGAATTCTCTTATCCCATTTGGAAGGATACCATCCTTATAACTACCCATGACTGTTTT
TGTCTCTAGCATGACCAATTGATAAAATGTGGAGGAAAGTAGGGGAAATGGCCGATACTACTGGAAGAATTCCTCTTTGG
CTGATAGGTACTGTAGCTGGTATTGCTGTGATTGGTTTAGTAGGTGTTTTCTTTTATGGTTCATATTCTGGATTGGGTTC
ATCTCTATAGTAATCGTAGGGACCAGATTGTAAACATGAAAAAGTAGGAGCTTAGCGGGTCCTTACCCCCCTTTATCTGA
TTAGAGCGGAAAGGACCCGCGGAATTTTTACTCTTATAACGCGAATTGAATCTATTCGATTCACTCTTATGAAGCAACAA
GAAAAAGAGATCACTCGAGGATCCAATATCTTATTCCACGAAGGAAGTATCCTGAAAATCCTTGATTTAGTTTCGAGTAA
TAAACTAATAAAACCTTAATTAAAACTATTCAACTAGCC------TA------AAAATAAAA-AAACCTTCAATGGAAGA
GTTTAC-TTTTTTTTT-GCAAAATTTCTGTAAATTTGAAGTTGAACTTAATTAAACAAGCCAAGCAATT-----TGCTCA
CAATCACAAGAAAATTTTCCCCCACCATATTTTCTTCCCCTCTGTTTGTCCACTACCCCGGCTAAACCTAAGCAAAAGAA
AAAGAGGTCCATGAGACAGACCCGAATAAAGAAGAAATAGTAATCTTT----GATGAATTACGAAGAAAAAGGGTTCTTA
TTTTGATACAAGAAGAATCGGCACAAGAAAAAGGCTTTTTCTTGTGCCGAATAGACGATTAAGAAGACCTGCAATCCCTC
CGAAAAGGAAGA
>SNPs
--------S--------------------------S---S----------------------------------------
-----------------------------------------------------------S--------------------
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------------------------------S-------------------------------------------------
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-------------------------------------------------------------------------S-----S
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---------------------------------------------------------------------------S----
S-------------------------------------------------------------------------------
----------------S---------------------------------------------------------------
---S----------------------------------------------------------------------------
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--------------------------------------------------S-----------------------------
------------------------------------------------------S-------------------------
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------------
>forward_40
------------------ACAGTTTGACCAGATTTGACCG----------------------------------------
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>reverse_1361
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CGTCTCTTGCATGACCAATTGA----------------------------------------------------------
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