>input_sequence_87487
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------------------------------------------------------ATGTCGCCGGTGATCAGCGAGATCCT
ACTCTCCGGGTTTATGATCAACTCCACACTCCGGCGCCGAACCCACCTCGTCCAGTCCTTCTCCGTCGTCTTCCTCTACT
GGTTCTATGTCTTCTCATAA------------------------------------------------------------
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>chr6A_1_TraesCS6A01G096400
ATATTCCTACAAATTTTCCAGGTTCCCACGAATCAAAA-GAGGTCCTATAGTCCGTAAAAAAAGGATGACGAGGCTCGTG
AGATTTGGAG---CCGCCACCTGGTCCGTTGCTAGACTAGCA-CCGCCCGTGATTCAAATCGTAGCCCGCCGCCGGCAAG
ACCCGCGTGCCAGTCATCTTGAATACTA---CCAT---CTACATTCTGCGCTTGCAATTGATGCCGCGAAAGACGTGCGT
CTTGGAGCCCAGACAGAGGCGGCGGATCAATGGCGGGCGGCCGCAGTAGACTCAGATTCTCTCCGCTTTCAAACCACCGC
GCGCCGGGCCAGGGTAGCATAA-----TTTTCACTTTTCACCGCCGGCCGGCTTTCGGCGCATCTTC-------CCGTGG
CAGAGAGA----GGCGCCGGCGC----CGGTAAGTTCGAGAG---GTTTCGACACGGAGGCCTCCTCTCTAGACGCGTCC
GCCAGTCAGCACACGGGGCCTACCGCCTACC--AGCTACAGCAGTGGCGCCGAGCCAAGTGAAGTGAACGCACCTG----
-------GGC----GGCATGGGCGC----GTGAGGCCAAGTGAGGTCAGCGTGATTTCCAGCTGAGCTGATTCAGCCTCG
GATCCACTCCGACCGGCCGCACGTGCGACCGCGCTCCCCGCGCTCGT---------------TCAGCCATTCCTGCATGC
CCGCTCTGCTGTGCTGCCCATC----------------GATCG-----------GATTCCCATTCCCACCCTCCCCCCAG
CGGAATCACATTCCCGTTCGTCCACACCCGAGCCACCGGCCGGCTCTATAAATCCCTCCCCGCTCCCTGCCCCAACACCC
CCCTCCTCCTCCTCC--CACTCTTCTTCCTCCTCCTCCACTCCAG--CTCCCCTGCACCGCAGCGAGAGAGA--------
CAGAGTCAGTCTAGAGAGGGAAGAGAAGCAGG------------------------------------------------
--G-----------AGAGGTCGGTG----TCATCCATTGCCGCCTAGCTTGGTTGGTTGCTTCTCTTCCTTCCCGGAGGC
AACCCAAGAAAGCGGAGCGCACATGCTTCCCCGGGTCCGCCTCAGAGTCCCCCGATGTCGCCGGTGATCAGCGAGATCCT
ACTCTCCGGGTTTATGATCAACTCCACACTCCGGCGCCGAACCCACCTCGTCCAGTCCTTCTCCGTCGTCTTCCTCTACT
GGTTCTATGTCTTCTCATAAACTACTCGCCCCCATA---GCCCTCCCCCTCCTCTCCCTCCTCCTCCT------TTAGCC
CTCCTGCTCATCCCTTCAAGCTCCCCTCGTCCCACACACTCGCTTACTCTCTCG---TCGTCGTCGTCGCCTCTCTAGAG
TCTAGAGTCAGTCCGTAGCTGGTAATCAAGTCGATCTTTGGTTCTTGCAACAACAACAAAGGAAAGCAGGGAG----TGC
CTGCCTGCTTGCTTGGCGGCG-----ATGGCGTCCTCC------AGCGGGAGCGGGAGCACGGGCTCGCTGTCGACGGCG
---GCGGCCATGGCGATGGCGGCCGCGTCGGGCACGGAGGAGGAGATGCGGGCGCTCATGGAGCAGCGCCGGGCCAAGCG
GATGCTCTCCAACCGGGAGTCGGCGCGCCGCTCGCGGATGCGCAAGCAGCGCCACCTCGACGACCTCGCCGCGCAGGCGG
CGCACCTGCGCCGCGAGAACGCGCACGTCGCCGCCGCGCTCGGCCTCACCGCGCGGGGCCTCCAGGCCGTCGACGCCGAG
AACGCCGTCCTCCGCACCCAGGCCGCCGAGCTCGCCGCGCGCCTCCACTCGCTCAACGACATCATCGCCTGCATGAGCGC
CAGCAACAACACCGCCGCCGCCGTCGCGCTCACCGTCGCCGCAGCAGCCACCGCCACCACCACCGACCCATTCCTCGGCG
GCTTCGACGGCGCGTCGCTCGACGACTACCTCTTCAGATCCTCCCCCGAGATGTTCATGTTCCCAGCCCTGCAAAGCTAG
CACCCACGCCACGGCCGTGGCAGCAGCACAAGAGCGA--GCGCAGCAAAAGAGATCATCT---TTTTTACCTGATGCTTC
TGGTGTTTCAGGTTAATTAAC----TACTACAAACTC-GGAGAGCAGTGGAGTTTTTACCGCACCCAACTAAGCTAGCTG
CTGGGGTTAATTAGTTTATAATTATCATGTGTAATCTGAACTGGTGTGTGTACCAAGTGATGATGGTTCTTAAGCTTAGC
ATGCATGCATCACCATCGAT
>chr6B_2
TATTCCTGC--AATTTTCCAGATTCCCACGAATCAAAG-GAGGCCCTAGGACGG---AAAAAGGGACGACGAGGCTCGTG
AAATTTGGAAT---------------CGTTGCTAGACTACCGCCCGCCCGTGATTCAAATCGTAGCCC---ACCGGCAAG
ACCCGCGTGCCAGTCACCTTGAATACTA---CCATCTACTACATTCTGCGCTTGCAATTGATGCTGCGAAAGACGTGCGC
CTTGGAGCCCAGACAGAGGCGGCGGATCAATGGCGGCCGGCCGCAGTAGAGGCAGATTCTCTCCGCTTTTGAACCACCGC
GCGCCGGGCCGGGGTAGCATGCATGATTTTTCACTTTTCACCGCGCGCCGGCTTTCGGCGCATCTTCCCGTGGGCCGTGG
CAGAGAGAGAGAGACGCCGGCGCGGGCCGGCTGGCAAGTTGGAGAGTCTGGACACGACGGCCTC--CTCTAGACGCCTCC
ACCAGTCACCACACGGGGCCTACCGCCTACC--AGCTACAGCAGTGGCGCCGGGCCAAGTGAAGTGAACGCGCCTGCACC
TGCGTAGTACGGCGGGCATGGGCGCGCGAGTGAGGCCAAGTGAGGTCAGCGTGATTTCCAGCCGAGCTGCCTCAGCCTCG
GATCCACTCCGACCGCCCGCACGTGCGACCGCCCCGCCC-------------------------------TCATTCCTGC
CCGCTCTGCGCCGCTGCTCTGCTGCACCGCTGCCGCTGCAATCGATCGGGGGTCGATTCCCATTCCCACCCTCCCCCCAG
CGGAATCGCATTCCCGTTCGTCCTCCCCCGAGCCACCGGCCGGCTCTATAAATCCCTCCCCGCTCCCTGCCCCAACACCC
CCCTCCTCCTCCTCC--CTCTCTTCTTCCTCCTG-----------CCCTCCTCTGCACCGCAGCGAGAGAGAGAGACAGA
CAGAGTCCGTCTAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCGAGGAAGGGAAGCAGGCAGTGAG
CTG-----------AGAGGTCGGCCGTCCACCCGTCCATTTCCCGGCCGGTGGAGCTCC---CTCTT-CTTCCCGGAGGC
AACCCAAGAAAGCGGAGCGCACATGCTTCCCCGGGTCCGCCTCAGAGTCCCCCGATGTCGCCGGTGATCAGCGAGATCCT
CCTCTCGGGGTTTATGATCAACTCCACACTCCGGCGCCGAACCCACCTCGTCCAGTCCTTCTCCGTCGTCTTCCTCTACT
GGTTCTATGTCTTCTCATAAACTACTCGCCCCCGCCGTCGCCCTCCCCCTCCTCTCCCTCCTCCTCCTCCTCCTTTAGCC
CTCCTGCTCATCCCTTCAAGCTCCCCTCGTCCCACACACTCGCTTACTCTCTCTCTCTCGTCGTCGTCGCAGTCTC----
TCTAGAGTCAGTCCGTAGCTGGTTACGATCC--ATCTTTGGTTCTTGCAACAACAACAAAGGAAAGCAGAGAGTGCTTGT
CTGCTCGCTTGCTTGGTGGTG-----ATGGCGTCCTCC------AGCGGGAGCGGGAGCACGGGCTCGCTGTCGACGGCG
GGGGCGGCCATGGCGATGGCGGCCGCGTCGGGCACGGAGGAGGAGATGCGGGCGCTCATGGAGCAGCGCCGGGCCAAGCG
GATGCTCTCCAACCGGGAGTCGGCGCGCCGCTCGCGGATGCGCAAGCAGCGCCACCTCGACGACCTCGCCGCGCAGGCGG
CGCACCTCCGCCGCGAGAACGCGCACGTCGCCGCCGCGCTCGGGCTCACCGCGCGGGGCCTCCAGGCCGTCGACGCCGAG
AACGCCGTCCTCCGCACCCAGGCCGCCGAGCTCGCCGCGCGCCTCCACTCGCTCAACGACATCATCGCCTGCATGAGCGC
CAACAACAACACCGCCGCCGCCGTCACGCTCACCGTCGCCGCAGCCGCCACCGCCACCACCGCCGACCCGCTCCTCGGCG
GCTTCGACGGCGCGTCATTCGAGGACTTCCTCTTCAGATCCTCCCCCGAGATGTTCATGTTCCCAGCCCTGCAAAGCTAG
CACCCACGCCACGGCCATGGCAGCAGCACAAGCACGAGCGCGCAACAAAAGAGATGATCCATCTTTTTTCCTGATGCTTC
TGGTGTTTCAGGTTAATTACTACAGTACAAAAAACTG-GGAGAGCCGTGGAGTTTTTACCGCACCTAACTAAGCTAGCTG
CTGGGGTTAATTAGTTTATAATTATCATGTGTAATCTGAACTGGTGTGTGTACCAAGTGATGATGGTTCTTAAGCTTAGC
ATGCATGCATCACCATC---
>chr6D_4
--TTCCTAC--AATTTTCCAGATTCCCACGAATCAAAATGAGGTCCTAGGACGG---AAAAAAGGACGACGAGCCTCGTG
AAATTTGGAAGGCCCGCCCCCTGGCCCGTTGCTAGACTAGCA-CCGCCCGTGATTCAAATCGTAGCCC---GCCGGCAAG
ACCCGCGCACCAGTCATCTTGAATACTAGTACCAT---CTACATTCTGCGCTTGCAATTGATGCTGCGAAAGACGTGCGC
CTCGGAGCCCAGACAGAGGCGGCGGATCAATGGCGGGCGGCCGCAGTAGAGCCAGATTCTCTCCGCTTTTGAACTACCGC
CGGGCCGGCT-GGGTAGCATGA-----TTTTCACTTTTCACCGCCCGCCTGCTTTCGGCGCATCTTC-------TCGTGG
CAGAGAGGCGCCGGCGCCGGCGCGGGCCGGTAAGTTCGAGAG---GTTTCGCCACGGAGGCCTCCTCTCTAGACGCATCC
GCCGGTCACCCCACGGGGCCTACCGGCTACCCGAGCTACAGCAGTGGCGCCGAGCCAAGTGAAGTGAACGCGCCTGCACA
TACGTACGGC----GGCATGGGCGC----GTGAGGCCAAGTGAGGTCAGCGTGATTTCCAGCTGAGCTGCTTCAGCCTCG
GATCCACTCCGACCGCCCGCACGTGCGACCGCCCTGCCCGCCTGCGCTCCCCGCGCTCTCACTCAGCCATTCCTGCATGC
CCGCTCTGCTGTGCT------CTGCACCGCTGCACTCAGATCG-----------GATTCCCATTCCCACCCTCCACCCA-
CGGAATTGCATTCCCGTTCGTCCTCCCCTGAGCCACCGGCCGGCTCTATAAATCCCTCCCCGCTCCCTGCCCCAACACCC
CCCTCCTCCTCCTCCTCCACTCTTCTTCCTCCTCCTCCACTCCATCCCTCCCCTGCACCGCAGCGAG-------------
CAGAGTCCGTCTAGAGAGAGAGAGAGAGAGAGAGAA------------------AGTGAGGAGGAGAAGCAAGCAGTACG
AGAGCTAGGAAGAAAGAGGTCGGTCTCACTCATCCATTGCCGCCTAGCTTGGTTGGTTGCTTCTCTT-CCCCCCGGAGGC
AACCCAAGAAAGCGGAGCGCACATGCTTCCCCGGGTCCGCCTCAGAGTCCCCCGATGTCGCCGGTGATCAGCGAGATCCT
ACTCTCCGGGTTTATGATCAACTCCACACTCCGGCGCCGAACCCACCTCGTCCAGTCCTTCTCCGTCGTCTTCCTCTACT
GGTTCTATGTCTTCTCATAAATTACTCGCCCCCGCCGCCGCCCTCCCCCTCCTCTCCCTCCT---CCTCCTCCTTTAGCC
CCCCTGCTCATCCCTTCAAGCTCCCCTCGTCCCACACACTCGCTTACTCTCTCG---TCGTCGTCGTCGTCGCCTC----
TCTAGAGTCAGTCCGTAGCTGGTAATCAAGTCGATCTTTGGTTCTTGCAACAACAACAAAGGAAAGCAGAGAG----TGC
TTGCCTGCTCGCTTGGTGGTGAGGTGATGGCGTCCTCCAGCGGGAGCGGGAGCGGGAGCACGGGCTCGCTGTCGACGGCG
G---CGGCCATGGCGATGGCGGCCGCGTCGGGCACGGAGGAGGAGATGCGGGCGCTCATGGAGCAGCGCCGGGCCAAGCG
GATGCTCTCCAACCGGGAGTCGGCGCGCCGCTCGCGGATGCGCAAGCAGCGCCACCTCGACGACCTCGCCGCGCAGGCGG
CGCACCTGCGCCGCGAGAACGCGCACGTCGCCGCCGCGCTCGGGCTCACCGCGCGGGGCCTCCAGGCCGTCGACGCCGAG
AACGCCGTCCTCCGCACCCAGGCCGCCGAGCTCGCCGCGCGCCTCCACTCGCTCAACGACATCATCGCCTGCATGAGCGC
CAGCAACAACACCGCCGCCGCCGTCGCGCTCACCGTCGCCGCAGCAGCCACCGCCACCACCGCCGACCCGCTC------G
GCTTCGACGGCGCGTCATTCGAGGACTTCCTCTTCAGATCCTCCCCCGAGATGTTCATGTTCCCAGCCCTGCAAAGCTAG
CACCCACGCCACGGCCATGGCAGCAGCACAAGAGCGA--GCGCAACAAAAGAGATCATCCATCTTTTTTCCTGATGCTTC
TGGTGTTTCAGGTTAATTACTAG--TACTACAAAAACTGGAGAGCCGTGGAGTTTTTACCGCACCTAACTAAGCTAGCTG
CTGGGGTTAATTAGTTTATAATTATCATGTGTAATCTGAACTGGTGTGTTTACCAAGTGATGATGGTTCTTAAGCTTA--
--GCATGCATCACCATCAT-
>SNPs
SSS-S-SSSSS----------S--------------------------SSSSSSSSS---------S-------------
-S-------S--------S-----S-------------------------------------------SSS---------
----------------------------------------------------------------S--------------S
--------------------------------------------------SS-----------------SS---------
----------S---------S------------------------S----------------------------------
----------------------------------------------------------------------------S---
--------S--------------------------------------------------------------S--------
---------------------------------------------------------------------S----------
---------------S----------------S--S-----SSS--S---------------------------------
-----------------S-SS-----------------------------------------------------------
-------S---------------S-S------------------------------------------------------
--------------------------------------------S-----------------------------------
-------S----------S--SSSSS--SSS-------------------------------------------------
------------------------S------------------------------------------S------------
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---------------------------------SSS--------------------------------------------
-----------------------------------------------------------------------S-SSSSSSS
---------------------------------------------------------------------S----------
----------------S--S------------------------------------------------------------
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-------------------------------------------S------------------------------------
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-------------------------------------------------------------S-------SS---------
----------------SS----S----S----------------------------------------------------
----------------S---------------------------S--------------S--------S-----------
-------------------SS------------------------S-------------------S--------------
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-----------------SSS
>forward_925
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-------------------------TTCCTCCTCCTCCACTCCAG-----------------------------------
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>reverse_2028
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---------------------------ACCTCTTCAGATCCTCCCCC---------------------------------
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