>input_sequence_87482
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-------------------------------------------ATGTACCCTATCGCCTGGGCAGTGGTTGAGAAAGAGA
CCAATGAGTCTTGGGATTGGTTTTGCTCTTTGCTTTTCAAAGATGTTGATGTGTATGATGGTAATGGTTGGGTCATTATA
TCAGACCAATAA--------------------------------------------------------------------
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>chr5B_1_TraesCS5B01G292700
TTTGACTCTGGATCAGATGAAGAAGACAGTGATTACTTCCCTAATGAGGAGGATGCATCTAAAGTAGATGAAGAATCAGA
ACAGATAAAGAAGACGTATGTAGAGTACAAGAAAAAAA-TTAGAAAAGGGGAGATACATATTCTAGATCATCTATTTTTT
GAGCAGCCTAGAGTAGGATCATCAAAGACAGTGAAAGAAGATAGTTCAGAGAAAGATGACAACGACACTGACTATGATGA
GTCTTCTCAGTTTGATGATTCTTATGATGAAGAAGGTGAAACCAGGGAAGACACTAGGCGCTTCAAAAGATTTAGAGAAA
GTGAAGAAACCCCA-AATTTGTTTTAGGGATGAAGTTTGGTTCAAGGCAAGAGTTTAGGGATGCAGTTATAAGGTATGGC
ATTAAGCAGAAAAAACTCATAAGA-TTCGGAAGAATGATAATAATAGGTGTAGGGCCACTTGTGATTGGCAAACATGCAA
TTGGTACTGCCTTGCTAGTCTGACAAGTAAGTCAAACATCTAGCAGATAACAAGTTTCAATGATGCCCACTATTGTCCAC
CTAGGAAAGACAACAAGCTGGTAACACCAACAAAGATTGCAGCCAAATATGAAAAAGTCATCAGTTCTAATCCAATGTGG
CAGATTGCACATCTGAGAAAACACATCCAAGAACATATGTGTGTGAATGTCAGTACATCCCAGGTTAAGAGAGAAAAGAG
AATGGTTATCAAGAAAATATATGATGCCATTAAAGAGCAATATACCAGGATTTTTGACTACCAGCTGGAGTTACTAAGGA
GCAATCCTAGAAGTACTGTAGTGGTCAAGTTAGATCCAAAAAGTAGCATTCCAACCTTTCAAAGGATTTACATATGTTTG
ACTTCTCTGAAAGAGGGTTTCAATACTGGATGTAGAAAAGTAATTGGACTGGATGGGTGTTTCTTCAAAGGTGCAACTAA
TGGAGAGCTACTATGTGCATTGGAAAGATATGCCAATAGCCAGATGTACCCTATCGCCTGGGCAGTGGTTGAGAAAGAGA
CCAATGAGTCTTGGGATTGGTTTTGCTCTTTGCTTTTCAAAGATGTTGATGTGTATGATGGTAATGGTTGGGTCATTATA
TCAGACCAATAAAGAGGGCATCATCAATGTTGTCCAGAATTGGGCTCCCCTTGCTGAACATAGGAATTGTGCAAGACATG
TTTATGCTGACTGGAGGAAAGAGTACATAATTAAAGATTGGAAGAAACTGTTCTGGAATTGTGCAAAGGCTCCATATGTG
AGTTTGTTCAACTATGCAAGGGCAAAGCTTGCAAGAGAAACTGCTGAAGGTGCAAGGGCAATAACAAGGCTAGATCCCAA
GCATTGCTCTAGAGCATGGTTCAGGTTAGGATCTAACTGTGACTCTGTCGACAATAACATCTGTGGAAGTTTCAACAGAT
GGATAATAGATGCTAGATTCTTGCCGATCATCTCAATGCTAGACGCTATCAGACAAAAAGTGATGGTTAGAATCCAGGAA
ATGATTACAAAATGCCTTAAATGGACAGGAGATATAGTTTTCCCTAAAATCAACAAAAAA-CCAAACAAATGCATTGAAT
ATTCTACCCAATGCGAACCTATATGCAATGGTCAAGATATATTTGAAGTTACACAGAACAAAAATCACAGGTTTACAGTG
GATTTGAATAGACTGAATTGCACTTG-GGGTACTGGCAGCTAGCTGGATTACCTGGTGTACATGCCATTTCAGCAATCC-
--CAAAATCAAGTGATTTGTCTCGTTACATAGCTAGTTGCTTCTATGTGGCTGCTTTCAAGACAACATATGCCTACTGCC
TGCAACCTGTGGATGGAATGGCTAGCTGGCCCATATCTCCAAGGCCAAGACCTGTAGCTCCAGGATATGTGAAATTGCCT
GGTAGGCCTAAGACTCAGAGGAACAAAGAGAAGGGTGAGAAGAAAGTTTCCAAAACAAAGGTACCAAAGACATGCACAGT
AATAAGATGTTCGAAGTGCAAA-GGACGGGCCATAATAAAATAACTTGTCATATAAAAGAAAGCAGCCAACCAGCTCAAA
CTATGATGTAGGTTAGTGAAAATTCTCTTCAGTTTATTTATCTGTATAGATTTTTCTT
>chr1A_1
TTTGACTCTGGTTCAGACGAAGAAGATAGTGATTACTGTCCTGATGAGGAAGATGCATCTGAAGAAGATGAAGAAGCAGA
ACAGATAAAGAAGACGTACGCAGAGTACAAGAAAAAAAATCAGAAAAGGGGAGATACAGATTCTAGATCATCTATTTTTT
GAGCAACCTAGAGTAGGATCATCAAAGACAGTGGAAGATGACAATTCAGAGAAAGATGACAATGACACTGACTATGATGA
CTCTTCTCAGTTTGATGATTCTTATGATGAAGAAGGTGAAACCAGGGAAGAC---AGACGCTTCAAAAGATTCAAAGAAA
GTGAAGAAACCCCACAATTTGTTTTAGGGATGAAGTTTGGTTCAAGGGAAGAGTTTAGGCGTGCAGTTATAAGTTATGGC
ATTAAGCAGAAAAAACTCATAAGATTTAGGAAGAATGATAATAATAGGTGTAGGGCCACTTGTGATTGGCAAACATGCAA
ATGGTATTGCCTTGCTAGTCTGACAAGTAAGTCAAACAGCTGGCAGATAACAAGTTTCAACGATGCACACTGCTGTCCAC
CTAGGAAAGACAACAAGTTGGTAACTTCAACAAGGATTGCAGCCAAATATGAGAAGGTCATCAGTTCTAACCCAGTGTGG
CAGATTGCACATCTGAGAAAACACATCCAGGAAGATATGTGTGTGAATGTCAGTACATCCCAGGTTAAGAGAGCAAAGAG
AATGGTTATCAAGAAAATATATGATGCCATTAAAGAGCAATATACCAGGATTTTTGACTACCAGCTGGAGTTACTAAGTA
GCAATCCTAGAAGTACTGTAGTGGTCAAGTTAGATCCAAAAAGTAGCATTCCAACCTTTCAAAGGATTTACATCTGTTTG
TCTGCTCTGAAGGAGGGTTTCAAGGCTGGATGCAGAAAAGTAATTGGACTAGATGGGTGTTTCTTCAAAGGTGCAACTAA
TGGAGAGCTATTATGTGCATTGGGAAGAGATGCCAATAGCCAGATGTACCCCATCGCCTGGGCGGTGGTTGAGAAAGAGA
CCAATGAGTCTTGGGATTGGTTTTGCTCTTTGCTTTTCAAAGATGTTGATGTGTATGATGGTAATGGTTGGGTCATTATA
TCAGACCAAC-AAAAGAGCATCATCAACGCTGTCTAGAATTGGGCTCCCCTTGCTGAACATAGGAATTGTGCAAGACATG
TTTATGCTAACTGGAGGAAAGAGTATAGAATTAAAGATTGGCAGAAACTATTCTGGAATTGTGCAAAGGCTCCATGTGTG
AGTTTGTTTAACTATGCAAGGGCAAAGCTTGCAAGAGAAACTGTTGAAGGTGCAAGGGCAATAACAAGGCTAGATCCCAA
GCATTGGTCTAGAGCATGGTTCAGGTTAGGATCTAACTGTGACTCTGTCGACAATAACATCTGTGAAAGTTTCAACAAAT
GGATAATAGATGCTAGATTCTTGCCGATCATCTCAATGCTAGAGGCTATCAGACAAAAGGTGATGGTTAGAATCCAGGAA
ATGATTGCAAAATGCCTTAAATGGACAGGAGATATAGTTTGCCCTACAATCAACAAAAAA-CTAAACAAATACATTGAAT
ATTCTGCCCAATGTGAACTTGTATGCAATGGTCAAGATATATTTGAAGTTACACAGAACAAAAATCACAGGTTTACTGTG
GATTTGAATAGACTGAATTGCACATGTGGGTACTGGCAGCTTGCTGGGTTACCTTGTGTACATGCCATTTCAGCAATCCA
CACAAAAACAAGTGATTTGTCTCCTTACATAGCTAGTTGCTTCTATGTGGCTGCTTTCAAGAAAACATATGCCTACTGCC
TGCAACCTGTCGATGGAATGGCTAGCTGGCCCATATCTCCAAGGCCAAGACCTGTAGCTCCAGGATATGTGAAAATGCCT
GGTAGGCCTAAGACTCAGAGGAACAAAGAGAAGGGTGAGAAGAAAGTTTCCAAAACAAAGTTACCAAAGACAGGCACGGT
GATCAGATGTTCGAAGTGCAAAGGGACGGGGCACAATAAAACAACTTGTCATATAAAAGAAAGCAGCCAACCAGCTCAAA
CTGTGAGGCTGGTTAGTAAAAAATCTCTTCACTTTATATGTATGTACTTATTTTTCTT
>chr7B_1
TTTGACTCTGGTTCAGACGAAGAAGATAGTGATTACTGTCCTGATGAGGAAGATGCATCTGAAGAAGATGAAGAAGCAGA
ACAGATAAAGAAGACGTACGCAGAGTACAAGAAAAAAAATCAGAAAAGGGGAGATACAGATTCTAGATCATCTATTTTTT
GAGCAACCTAGAGTAGGATCATCAAAGACAGTGGAAGATGACAATTCAGAGAAAGATGACAATGACACTGACTATGATGA
CTCTTCTCAGTTTGATGATTCTTATGATGAAGAAGGTGAAACCAGGGAAGAC---AGACGCTTCAAAAGATTCAGAGAAA
GTGAAGAAACCCCACAATTTGTTTTAGGGATGAAGTTTGGTTCAAGGGAAGAGTTTAGGCGTGCAGTTATAAGTTATGGC
ATTAAGCAGAAAAAACTCATAAGATTTAGGAAGAATGATAATAATAGGTGTAGGGCCACTTGTGATTGGCAAACATGCAA
ATGGTATTGCCTTGCTAGTCTGACAAGTAAGTCAAACAGCTGGCAGATAACAAGTTTCAACGATGCACACTGTTGTCCAC
CTAGGAAAGACAACAAGTTGGTAAATTCAACAAGGATTGCAGCCAAATATGAGAAGGTCATCAGTTCTAACCCAATGTGG
CAGATTGCACATCTGAGAAAACACATCCAGGAAGATATGTGTGTGAATGTCAGTACATCCCAGGTTAAGAGAGCAAAGAG
AATGGTTATCAAGAAAATATATGATGCCATTAAAGAGCAATATACCAGGATTTTTGACTACCAGCTGGAGTTACTAAGGA
GCAATCCTGGAAGTACTGTAGTGGTCAAGTTAGATCCAAAAAGTAGCATTCCAACCTTTGAAAGGATTTACATCTGTTTG
TCTGCTCTGAAGGAGGGTTTCAAGGCTGGATGTAGAAAAGTAATTGGACTAGATGGGTGTTTCTTCAAAGGTGCAACTAA
TGGAGAGCTATTATGTGCATTGGGAAGAGATGCCAATAGCCAGATGTACCCCATCGCCTGGGCGGTGGTTGAGAAAGAGA
CCAATGAGTCTTGGGATTGGTTTTGCTCTTTGCTTTTCAAAGATGTTGATGTGTATGATGGTAATGGTTGGGTCATTATA
TCAGACCAAC-AAAAGGGCATCATCAACGCTGTCCAGAATTGGGCTCCCCTTGCTGAACATAGGAATTGTGCAAGACATG
TTTATGCTAACTGGAGGAAAGAGTATAGAATTAAAGATTGGCAGAAACTATTCTGGAATTGTGCAAAGGCTCCATGTGTG
AGTTTGTTCAACTACGCAAGGGCAAAGCTTGCAAGAGAAACTGTTGAAGGTGCAAGGGCAATAACAAGGCTAGATCCCAA
GCATTGATCTAGAGCATGGTTCAGGTTAGGATCTAACTGTGACTCTGTCGACAATAACATCTGTGAAAGTTTCAACAAAT
GGATAATAGATGCTAGATTCTTGCCGATCATCTCAATGCTAGAGGCTATCAGACAAAAGGTGATGGTTAGAATCCAGGAA
ATGATTGCAAAATGCCTTAAATGGACATGAGATATAGTTTGCCCTACAATCAACAAAAAAACTGAACAAATACATAGAAT
ATTCTGCCCAATGTGAACCTTTATGCAATGGTCAAGATATATTTGAAGTTACACAGAACAAAAATCACAGGTTTACTGTG
GATTTGAATAGACTGAATTGCACATGTGGGTACTGGCAGCTTGCTGGGTTACCTTGTGTACATGCCATTTCAGCAATCCA
CACAAAAACAAGTGATTTGTCTCCTTACATAGCTAGTTGCTTCTATGTGGCTGCTTTCAAGAAAATATATGCCTACTGCC
TGCAACCTGTCGATGGAATGGCTAGCTGGCCCATATCTCACAGGCCAAGACCTGTAGCTCCAGGATATGTGAAAATGCCT
GGTAGGCCTAAGACTCAGAGGAACAAAGAGAAGGGTGAGAAGAAAGTTTCTAAAACAAAGTTACCAAAGACAGGCACGGT
GATCAGATGTTCGAAGTGCAAAGGGACGGGGCATAATAAAACAACTTGTCATATAAAAGAAAGCAGCCAACCAGCTCAAA
CTGTGAGGCAGGTTAGTAAAAAATCTCTTCACTTTATATGTATGTACTTATTTTTCTT
>chrUn_1
TTTGACTCTGGTTCAGACGAAGAAGACAGTGATTACTGTCCTGATGAGGAAGATGCATCTGAAGAAGATGAAGAAGCAGA
ACAGATAAAGAAGATGTACGCAGAGTACAAGAAAAAAA-TCAGAAAAGGGGAGATACAGATTCTAGATCATCTATTTTTT
GAGCAACCTAGAGTAGGATCATCAAAGACAGTGGAAGATGACAATTCAGAGAAAGATGACAATGACACTGACTATGATGA
CTCTTCTCAGTTTGATGATTCTTATGATGAAGAAGGTGAAACCAGGGAAGAC---ATACGCTTCAAAAGATTCAGAGAAA
GTGAAGAAACCCCACAATTTGTTTTAGGGATGAAGTTTGGTTCAAGGGAAGAGTTTAGGCGTGCAGTTATAAGTTATGGC
ATTAAGCAGAAAAAACTCATAAGATTTAGGAAGGATGATAATAATAGGTGTAGGGCCACTTGTGCTTAGCAAACATGCAA
ATGGTATTGCCTTGCTAGTCTGACAAGTAAGTCAAACAGCTGGCAGATAACAAGTTTCAACGATGCACACTGCTGTCCAC
CTAGGAAAGACAACAAGTTGGTAACTTCAACAAGGATTGCAGCCAAATATGAGAAGGTCATCAGTTCTAACCCAATGTGG
CAGATTGCACATCTGAGAAAACACATCCAGGAAGATATGTGTGTGAATGTCAGTACATCCCAGGTTAAGAGAGCAAAGAG
AATAGTTATCAAGAAAATATATGATGCCACTAAAGAGCAATATACCAGGATTTTTGACTACCAGCTGGAGTTACTAAGGA
GCAATCCTGGAAGTACTGTAGTGGTCAAGTTAGATCCAAAAAGTAGCATTCCAACCTTTCAAAGGATTTACATCTGTTTG
TCTGCTCTGAAGGAGGGTTTCAAGGCTGGATGCAGAAAAGTAATTGGACTAGATGGGTGTTTCTTCAAAGGTGCAACTAA
TGGAGAGCTATTATGTGCATTGGGAAGAGATGCCAATAGCCAGATGTACCCCATCGCCTGGGCGGTGGTTGAGAAAGAGA
CCAATGAGTCTTGGGATTGGTTTTGCTCTTTGCTTTTCAAAGATGTTGATGTGTATGATGGTAATGGTTGGGTCATTATA
TCAGACCAAC-AAAAGGGCATCATCAACGCTGTCCAGAATTGGGCTCCCCTTGCTGAACATAGGAATTGTGCAAGACATG
TTTATGCTAACTGGAGGAAAGAGTATAGAATTAAAGATTGGCAGAAACTATTCTGAAATTGTGCAAAGGCTCCATGTGTG
AGTTTGTTCAACTATGCAAGGGCAAAGCTTGCAAGAGAAACTGTTGAAGGTGCAAGGGCAATAACAAGGCTAGATCCCAA
GCATTGGTCTAGATCATGGTTCAGGTTAGGATCTAACCGTGACTCTGTCGACAATAACATCTGTGAAAGTTTCAACAAAT
GGATAATAGATGCTAGATTATTGCCGATCATCTCAATGCTAGAGGCTATCAGACAAAAGGTGATGGTTAGAATCCAGGAA
ATGATTGCAAAATGCCTTAAATGGACAGGAGATA----------------------------------------------
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>SNPs
-----------S-----S-------------------SS---S-------S---------S---S----------S----
------------------S-S-------------------S-----------------S---------------------
-----S---------------------------S----S--S-S------------------S-----------------
S---------------------------------------------------SSS--S--------------S-------
-----------------------------------------------S-----------SS------------S------
---------------------------S----------------------------------------------------
S-----S-------------------------------S--S------------------S-----S----S--------
-----------------S-------SS------S------------------S--S--------------S---------
-----------------------------S---S---------------------------------------S------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------S------
S--S-------S-----------SS-------------------------S-----------------------------
----------S------------S----S----------------------S-----------S----------------
--------------------------------------------------------------------------------
---------SS--S-------------S-S--------------------------------------------------
--------S----------------S-S-------------S-------S-------------------------S----
-------------------------------------------S------------------------------------
------S----------------------------------------------------------S-----------S--
-------------------------------------------S--------------S---------------------
------S---------------------------------S-----S---------------S--------S--------
-----S-------S------S-------------------------------------------------------S---
-----------------------S-----------------S-----S------S-------------------------
-------S---------------S--------------------------------------S-----------------
----------S---------------------------------------------------------------S-----
------------------------------------------------------------S-----------S----S--
S--S--------------------------S----------S--------------------------------------
--S---S-S--------S----S--------S-----S-S-S----SSS---------
>forward_368
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--------------------------GGGATGAAGTTTGGTTCAAGGC--------------------------------
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>reverse_1851
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----------GGATGGAATGGCTAGCTGGC--------------------------------------------------
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