>input_sequence_87463
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----------------------------------------------------------------------------ATGG
AAACAGCAACTTTGGTCGCCATCTCCATATCTTGTTTACTTGTAAGCTTTACTGGGTATGCCTTATATACCGTGTTTGGG
CAACTCTCTCAACAATTAAGAGATCCATTCGAAGAGCACGGAGACTAA--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--
>chr1B_1_TraesCS1B01G185500
CTTCCTATACATAAAATGCACATAAACTTTTGGCAAAGATACTACAAACTAAAAGATAGAAACACAGGAAGTGGTACGAA
CATCAGAAGACTCCATCTCAGACTCATCACTAGACAGATCAGCCAAATGAAGTTTCTCTGTCATAGAAGGCTGTGGTGGT
GGAGGGGGAGGAGGAGCAGGCACTTGTGATGGTAGAGGTGGAGTAGGCAATGCCGTCCGAAATGGAGCTGGAAGGTTCAT
CTTGTTCATCAAATGCAACACCTGTTACATAAATACATCAATCTAAATACATTTGCTCATG-TGAATGCACAAAATAATA
GCTTGCGAACTGTCACAGTAGTTCACGAGGTTGAAATTCTAATGGACCTGGGTGTAAAATCGGGGAACGGCAATGAGAGA
GTTGACAATATTTGTCAATATGTTTCCATCAGGTGGTGGGTATG---------CATACCTAAAAATAAATAAAGAGCACT
ATGGTTAATCACAC-TTCTCAAGTAAGATGGTGGATTAGGACTGCCAACATGGATAAAAGAAAGAGCTTCTGCAGATAAG
AATTGGTTGGCCTCGTGGGAAAACTATGAAACATCGCAGA--------------AGTATGGAGTATGGAGTCTCAGAAGT
CAGAATTGCATCTTAGTCAGGATATAGAACTTCATAATTCAGAAGTGGTTTGCTAGATTGATTTTGCTACTTCTGATTGG
ATAATATAAGCAAATTGGCCATAAACGCTTGCATTGATAACTAACAGGCCTGT--AGAAGGGTCATAAGTCCAGTAG-TG
GTAAATTGAGCTACTCACTTCTCATACATACAAGCATTTTGTTGAAACGGGGA-AAATAAGGCTACTTTTAAATTAGAGA
TAAAAACTACTACTTTTTTT----AACAAGACAATGTAC---TTATGTAATCCCTGCTGGTAATAGAATAGACCAGGATT
CCCTCAAAATAGAATAGACCAGGATTCCCTCAAAATAGAATAGACCAGGTCATCTTACCCTTGTCGAGCTATAAAAATGG
AAACAGCAACTTTGGTCGCCATCTCCATATCTTGTTTACTTGTAAGCTTTACTGGGTATGCCTTATATACCGTGTTTGGG
CAACTCTCTCAACAATTAAGAGATCCATTCGAAGAGCACGGAGACTAATACTTTAAGTTTGAAGTCTCCCCATCTGGGAG
ACTTCTTATAAA--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------ATACCCTTACTACCAGGCACTTTTATATAAGGCGCCCACACATTTCAAAA
GTAAAATTTGACCAATAGTTAGACCAATAAAATGTCAGTTATGTGACATGAAAG--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------AGATATCATATAGGAATTCAACGATATTAATTTTGTGTCACAGAACTAAAA
TATTATTGGTCTAGCTC---------------------------------------------------TTG---------
-------------GTCAAACTGAATGTATGAATGTGTGGGTGCCTTATATTTTAGAGCAGAAGAGTACTACAAATACAAA
GGTGAAGTTGCACATAGCAGCTCGCATCTTCAGTTACTAAATGGTATTTTGCAGACAAC-----AGCTTCATTTCTAATA
ACACATAACATATCAATTACCTACATGCAATGGCTTAAGTGG--------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------TCATAACTCATAAGAAAAGGAAGATGT
TGGA------------AGATAATGAATGAAACAACAACGATGGAGATAACATACTCAAGATGAGGAGGAAATGAATAGTC
CACACCAAGCCTAGAAGCGATCGGTTCGGCAGTTGATGTAGGATTCTC--TTGATTCTGGGAATTCATACTTGGCACTTG
AGGCATCCTGTGAGCTAATTCCTCCTGATGCTTCTCGTTCGCATTCTTGGCATTTGGCTTGTTTGCTCTCTCGACTATCA
GTACTTTCCCAAGGATCTTGAACCTGCCAAAACCAGCCCTTAGC--CAA-AAAA--AAAAAAACAATAACGAAGGACAGA
AATTCACAAAATTAAGATCACGAAAACAATTCATATTTCACAGGCAGTTCGAACAAAGAGAATGTACAACTAATCAAGCA
GAGTATGTACTTGAG--GGAAGGAACCTGTTCAACACAGACTGCGCCTGATTGGCCGCCATCTCGTCCCTAAAATCCACA
AATGCACAGTTCCTCAGCCTGT---------------------------------------------------AACGGTG
AAAATAGTTTCAGTAAAAAATATACCATATGTATTACCTAGGCGGGCAGACAAATCTCAGTAGACCTAAAGAACTTCTTT
TG
>chr1D_1
CTTCCTATATATAAAGCACACATAAACTTTTGGCAAAGATACTACAAACTAAAAGATAGAAACACAAGAATTGGTACGAA
CATCAGAAGACTCCATCTCAGACTCATCACTAGACAAATCAGCCAAATGAAGTTTCTCTGTCATAGAAGGCTGCGGTGGT
GGAGGGGGGGGAGGAGCAGGCACTTGTGATGGTAGAGGTGGAGTAGGCAATGCCGTCCGAAATGGAGCTGGAAGGTTCAT
CTTGTTCATCAAATGCAACACCTGTTACAGAAATACATCAATCCAAATACATTTGCTCATGCTAAATGCACAAAATAATT
CCTTGTGAACTGTAACAGTAGTCCACGAGGTTGAAATTCTAATAAACCTGAGTGTAAAATCGGGGAACGGCAATGAGAGA
GTTGACAATATTTGTCAATATGTTTCCATCTGGTGGTGGATATG---------CATACCTAAAAATAAATCAAGA-----
---GTTAATCACAT-TTCTCAAGTAAGATGGTGGATTAGGACTGCTAACATGGATAACGGAAAGAGCTTCTGCAGAAAAG
AATTGGTTGACCTCGTTGGAAAACTATGAAACATTTCAGAAGTATGGAGTATGGAGTATGGAGTATGGAGTCTTAGAAGT
CAGAATTGCATCTTGGTCAGGATATAGAACTTCAAAGTTCGGAAGTGGCA------------------------------
--------------------ATAAACGCTTGCATTGATAACTCACAGGCCATT--AGACGGGTCATAAATCCAGTAG-TG
GTAAATTGAGCTACTAACTTCTCATACAGACAAGCATTTTGTTGAAACGGGAAC-AAGAAGACAACTTTTAAATTAGAGA
TA-AAACTACTACTTTTT--TTTGAACAAGATAATGTAC---TTATGTAATCCCTGCTGGTAATAAAATAGACCAGGATT
CCCTGAAAATAGAATA-------------------------AGACCAGGTCATCTTACCCTTGTCGAGCTATACAAATGG
AAACAGCAACTTTGGTCGCCATCTCCATATCTGGTTTA------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--
>chr1A_1
CTTCCTATATATAAAGCACACATAAACTTTTGGCGAAGATACTACAAACTAAAAGATAGAAACACAAGAATTGGTACGAA
CATCAGAAGACTCCATCTCAGACTCATCACTAGACAAATCAGCCAGATGAAGTTTCTCTGCCATAGAAGGCTGCGGTGGT
GGAGGGGGAGGAGGAGCAGGCACTTGTGATGGTAGAGGTGGAGTAGGCAATCCCGTCCGAAATGGAGCTGGAAGGTTCAT
CTTGTTCATCAAATGCAACACCTGTTACAGAAATACATCAATCCAAATACATTTGCTCATGCTAAATGCACAAAATAATG
CCTTGTGAACTGTAACAGTAGTTCACGAGGTTGAAATTCTAATAAACCTGAGTGTAAAATCGGGGAACGGCAATGAGAGA
GTTGACAATATTTGTCAATATGTTTCCATCTGGTGGTGGATATG---------CATACCTAAAAATAAATAAAGA-----
---GTTAATCACAT-TTCTCAAGTAAGATGGTGGATTAGGACCGCTAACATGGATAACAGAAAGAACTTCTGCAGAAAAG
AATTGGTTGACCTCGTTGGAAAACTATGAAACATTTCAGA--------------AGTATGGAGTATGGAGTCTCAGAAGT
CAGAATTGCATCTTGGTCAGGATATAGGACTTCAAAGTTCGGAAGTGGCA------------------------------
--------------------ATAAACGCTTGCATTGATAACTCACAGGCCTTT--AGACGGGTCATAAATCCAGTAG-TG
GTAAATTGAGCTACTAACTTCTCATACAGACAAGCATTTTGTTGAAACGGGAACAAAGAAGACAACTTTTAAATTAGAGA
TA-CAACTACTACTTTTTTCTTTGAACAACACAATGTAC---TTATGTAATCCCTGCTGGTAATAGAATAGACCAGGATT
CCCTCAAAATTGAATA-------------------------AGACCAGGTCATCTTACCCTTGTCGAGCTATACAAATGG
AAACAGCAACTTTGGTCGCCATCTCCATATCTGGTTTACTTGTAAGCTTTACTGGGTATGCCTTATATATCGCGTTTGGG
CAACCCTCTCAACAATTAAGAGATCCATTCAAAGAACACGGAGACTAAT---TT--------------------------
-----TTACAAA--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------ATACCTTTAATACCAGGCATTTTTATATAAGGTGCCCACACATTCCAAAA
G--AAATTTGGCCAACAATTAGACCAATAAAATGTCGGTTATGTGACATGAAAG--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------AGATATCATTTAGGAATTCAACGATATTAATTTTGTGTCACAGAACTAAAA
TAATATCGGTCTAGCTC---------------------------------------------------TTG---------
-------------G----------------------TGGGTCCCTTGTATTTTAGAACAAAAGAGTACTACAAATACAAA
GGTGAAGTTGCAGATAGCAGCTCGCATCTTTAGTTACTTCACTTCA--------------------------TTCTAATA
ACACATAACATATCAATTACCTATATGAAATGGCTTAAGTGA--------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------TCATAACTCATAAGAAAAGGAAGATGT
TGGA------------AGATAATGAGTGAAACAACGACGATGGCGATAACATACTCAAGATGAGGAGGAAATGAATAGTC
CACACCAAGCCTAGAAGCGATCGGTTCGGCAGTTGATGTAGGATTCTC--TTGATTCTGGGAATTTGTACTTGGCACTTG
AGGCATCCCATGAGCTAATTCCTCCTGATGCTTCTCGTTCACATTCTTGGCATTTGGCTGGTTTGCTCTCTCAACTATCA
GTACTTTCCCAAGGATCCTGAACCTGCAAAAACCAGCCCTTAGC--AAA-AAAA--AA-----------TGAAGGAAAGA
AATTCACAAAATTAAGATCACAAAAAAAAGTCATATTCCGCAGCTAGTTCGAACAAAGAAAATGTACAACTAATCAAGCA
GAGCGTGTACTTGAG--GAAAGGAACCTGTTCAACACAGACTGCGCCTGATTGGCCGCCATCTCGTCCCTAAAATCCACA
AATGCACAGTTCCGCAGCCTGT---------------------------------------------------AACGGTG
AAAATAGTTTCAGTAAAAAATATACCACATGTATTACCTAGGCGAGCAGACAAATCTCAGTATACCTAAAGAACTTCTTT
TG
>chr6D_7
------ATATATAAAGTGTGCATAAACTTTTGGCAAAGATACTACAAACTGAAAGATACAAACACAAGTAGTGGCACGAA
CATCAGAAGACTCCATCTCAGACTCATCACTAGACAAATCAGCCAAGTGAAGTTTCTCTGTCATAGAAGGCTGCGGTGG-
--AGGGGGAGGAGGAAGAGGCCCTTGTGATGGTAGAGGTGGAGTAGGCAATGCCATCCGAAATGGAGCTGGAAGGTTCAT
CTTGTTCATCAAATGCAACACCTGTTACAGAAATACATCAATCT-AATACATTTGCTCATGCTGAATGCCCAAAGTAATG
CCTTGCAAATTGTATCAGTAGTTCACGAGGCTGAAATTCTAATAAACCTGATTATAAAATCGGGGAACGGCAATGAGAGA
GTTGACAATATTGTTCAATATGTTTCCGTCTGGTGGTGGATATG---------CATACCTAAAAACAAATAAAGA-----
---GCATGATCCACATTGTCAAGTAAGATGGCGGATTAGGACTGCCAGCATGAATCAGAC--------------------
--TTGGTTGGTCTCGTTGGAAAACTATGAAACATTGCAGA--------------ACTATGGAGTATGGAGTCTCAGAAGT
CAGAATTGCATCTCAGTCAGGATATAAAACTTCATAGTTTGGAAGTGGTTTGCTAGATTGATTTCCTTACTTCCAATTGG
ATAATATAAGCAAATTGGCCATAAACACTTGCACTATTAACA-----GCCTGT--ATAAAGGTCATAAATCCAGTAC-TG
GTAAATTGAGCTACTAACTTCGCATACAGACAAGCATTTTATTGAAACAGGAA-AAAGAAGGCAGCTTTTCAATTAGAGA
TA-CAA----------------------------TGTAC---TATTGTACTCCCT-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------GCTTCTTGATATAAGGTGCCCACAAATTCCAAAT
-GAAAATTTGACCAACAATTAGACCAATAAAATGTGGGTTATGTGACATGAAGG--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------AGATACCA-TTAGGAATTCAACGATATCATTTTTGTGTCACAGAACTAACA
TATTATCGGTCTAGCTCTTGGTCAAACTACCTCGTGTGGGAGCTTTCAGCACTGGGTAAACCCTTTTCTTGGTCAAACTA
----------------------AATGTTTGAATGTGTGAATGCCTTACATTTTAGAAAAGAGAAGTACTACAAAAACAAA
GGTGAAGTTGCAGATAGAAGTTCGCATCTTCAGTTACTAAATGATATTTTGCAGCCAACAATGTAGCTTCATTTCTAATA
AGACACAACATATCAGTTAGCTACATGAAATGGCTTAAGCGA--------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------TCACAAGAAAA----------------
-GGAAGATGTTTTGGAAGATAATGAGTGAAACAACGATGATGGTGATAACATACTCAAGATGAGGAGGAAATGGATAGTC
CACACCAAGCCTAGAAGCGATCGGTTCGGGAGTTGATGTGGAA--CTCTTTTGATTTTGGGAATTCATACTTGGCACTTG
AGGCATCCCGCGAGCTAATTGCTCCCGAGCCTTCTCGCTCGCATTCTTGGCATTTGGCTGGTTTGCTCTCTCGAGTATCA
GTACTTTCCCAAGGAGCCTCAACCTGCCAAAACCAGCCCTTAGC--AAG-AAAATTAA-----------CGAAGGACAGA
TATTCACAAAATTAAGATCACTGAGACAATTCATAATTAGTAGCTAATTCAGACAAAGAAAATGTACAAGCAATCAAGCA
GAGCGTATGCTTGAG--GAAATGAACCTGTTCAACTGAGACTGCGCCTGATTGGCCGCCATCTCGTCCCTAAAATCCACA
AACGCGCAGTTCCTCAACCTGTCAGTGTCATGA---------------------------------------------TG
AAAATAGTTTCAGTAAAAAATATACCATATATATTACCTAGGCGAGCAGACAAATCTCAGTATACCCAAAGAACTTCTTT
TG
>chr6B_7
------ATATATAAAGTGTGCATAAACTTTTGGCAAAGATAATACAAACTGAAAGATACAAACACAAGAAGAGGCACGAA
CATCAGAAGACTCCATCTCAGACTCATCACTAGACAAATCAGCCAAGTGAAGTTTCTCTGTCATAGAAGGCTGCAGTGGT
GGAGGGGGAGGAGGAAGAGGCCTTTGTGATGGTAGAGGTGGAGTAGGCAATGCCATCCGAAATGGAGCTGGAAGGTTCAT
CTTGTTCATCAAATGCAACACCTGTTACAGAAATACATCAATCTAAATACATTTGCTCATGCTGAATGCCCAAATTAATG
CCTTGCAAATTGTATCAGTAGTTCACGAGGCTGAAATTCTAATAAACCTGATTGTAAAATCGGGGAACAGCAATGAGGGA
GTTGACAATATTGTTCAATATGTTTCCATCTGG---------TG---------CATACCTAAAAACAAACAAAGA-----
---GCATGATCCACATTGTCAAGTAAGATGGCAGATTAGGACTGCCAGCATGAATCAGAC--------------------
--TTGGTTGATCTCGTTGGAAAACTATGAAACATTGCAGA--------------ACTATGGAGTATGGAGTCTCAGGAGT
CAGAATTGCATCTCGATCAGGATATAAAACTTCATGGTTTGGAAGTGGTTTGCTAGATTGATTGCGTCACTTCCGATTGG
ATAATATAAGCAAATTGGCCATAAACACTTGCACTGTTAACT-----GCCTGT--ATAAAGGTCATAAATCCAGTAGTTG
GTAAATTGAGCTACTAACTTCGCATACAGACAAGCATTTTATTGAAACAGGAA-AAAGAAGGCAGCTTTTCAATTAGAGA
TA-CAA----------------------------TGTACTAGTATTGTACTCCCT-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------GCTTCTTGATATAAGGCGCCCACAAATTCCAAAT
-TAAAATTTGACCAACAATTAGACCAATACAATGTGGGTTATGTGGCATGAAAG--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------AGATATTATTTAGGAATTCAACGATACCATTTTTGTGTCACAGAACTAACG
TATTATCGGTCTAGCTCCTGGTCAAACTACCTCGTGTGGGAGCTTTCAGCACTGGGTACACCCTTTTCTTGGTCAAACTA
AATGTTTGAATATG----------------------TGGATGCCTTACATTTTAGAAAAGAGAAGTATTACAAAAACAAA
GGTGAAGTTGGAGATAGAAGTTCGCATCTTCAGTTACTAAATGATATTTTGCAGCCAACAATGTAGCTTCATTTCTAATA
AGACACGACATGTCAATTAGCTACATGAAATGGCTTAAGCGA--------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------TCACAAGAAAA----------------
-GGA------------AGATAATGAGTGAAACAACGATGATGGCGATAACATACTCAAGATGAGGAGGAAATGGATAGTC
CACACCAAGCCTAGAAGCGATCGGTTCGGCAGTTGATGTAGAA--CTC--TTGATTTTGGGAATTCATACTTGGCACTTG
AGGCATCCCGTGAGCTAATTGCTCCTGATGCTTCTGGATCGCATTCTTGGCATTTGGCTGGTTTGCTCTCTCGAGTATCA
GTACTTTCCCAAGGAGCCTCAACCTGCAAAAACCAGCCCTTAGC--AAACGAAAATAA-----------TGAAGGACAGA
TACTCACAAAATTAAGATCACGGAGACAATCCATAATTAGTAGCTAGCTCGAACAAAGAAAAAGTAAAAGTAATCAAGCA
GAGCGTATGCTTGTTGAGAAATGAACCTGTTCAACTGAGACTGCGCCTGATTGGCCGCCATCTCGTCCCTAAAATCCACA
AAAGCACAGTTCCTCAACCTGTCAATGTCATGA---------------------------------------------TG
AAAATAGTTTCAGTAAAAAATATACCATAGAT-TTACCTAGGCGAGCAGACAAATCTCAGTATACCTAAAGAACTTCTTT
TG
>chr6A_21
--------------------CATAAACTTTTGGCAGAGATACTACAAACTGAAAGATACAAACACAAGAAGTGGCACGAA
CATCAGAAGACTCCATCTCAGACTCATCACTAGACAAATCAGCCAAGTGAAGTTTCTCTGTCATAGAAGGCTGCGGTGGT
GGAGGGGGAGGAGGAAGAGGCCCTTGTGATGGTAGAGGTGGAGTAGGCAATGCCATCCGAAATGGAGCTGGAAGGTTCAT
CTTGTTCATCAAATGCAACACCTGTTACAGAAATACATCAATC-AAATACATTTGCTCATGCTGAATGCCCAAAGTAATG
CCCTGCAAATTGTATCAGTAGTTCACGAGGCTGAAATTCTAATAAACCTGATTGTAAAATCGGGGAACGGCAATGAGAGA
GTTGACAATATTGTTCAATATGTTTCCATCTGG---------TGGTGGATATGCATACCTAAAAACAAATAAAGA-----
---GCATGATCCACATTGTCAAGTAAGATGGAGGATTAGGACTGCCAGCATGAATCAGAC--------------------
--TTGGTTGATCTCGTTGGAAAACTATGAAACATTGCAGA--------------ACTACGGAGTATGGAGTCTCAGAAGT
CAGAATTGCATCTCGGTCAGGATATAAAACTTCATAGTTTGGAAGTGGTTTGCTAGATTGATTTCGTTACTTCCAATTGG
ATAATATAAGCAAATTGGCCATAAACACTTGCACTGTTAACG-----GCCTGTATATAAAGGTCATAAATCCAGTAG-TG
GTAAATTGAGCTACTAACTTCTCATAGAGACAAGCATTTTATTGAAACAGGAA-AAAGAAGGCAGCTTTTCAATTAGAGA
TA-CAA----------------------------TGTAC---TATTGTACTCCCT-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------GCTTCTTGATATAAGGTGCCCACAAATTCCAAAT
-TAAAATTTGATCAACAATTAGACCAATATAA------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------AACTACCTCGTGTGGG----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------GATAATCCATAATTATTAGCTGGCTCGAACAAAGAAAATTTACAAGTAATCAAGCA
GAACGTATGCTTGAG--GAAATGAACCTGTTCAACTGAGACTGCGCCTGATTGGCCGCCATCTCGTCCCTAAAATCCACA
AACGCACAGTTCCTCAACCTGTCAATGTCATGA---------------------------------------------TG
AAAATAGTTTCAGTAAAAAA-ATACCATATGC--TACCTAGGCGAGCAGACAAATCTCAGTATACCCAAAGAACTT----
--
>chr3B_993
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------CTATAAAAATGG
AAACAGCAACTTTAGTCGCCATCTCCATATCTGGTTTACTTGTAAGCTTTACTGGGTATGCCTTATATACCGCGTTTGGG
CAACCCTCTCAACAATTAAGAGATCCATTCGAAGAACACGGAGACTAAT---TTAAGTAAGAAGTCCCCCTATCTGGGAG
ACTTCTTACTTAAATGAAATTATTTTATTCTTTTAGTTGGAGTTGGTGGAACCTTAGGTGGTTCTCGGAAGAAGATAGCG
AAAAAAATTATCCCTAAAGTCGAAACTAAAAGGAACGTATAAAGCCATTGCGACCCCCATAAAAGGAGTAGTCCCCCAAC
CCGGGGCGACTTTCCCATATTCCGAATTCAAGGGTTTCAGTAAACTACCTGCACCAGTTCGTTTTGGCCTAGGTTTAGAA
CTATCTTCAACGGTTTGTGTAGCCATAAATTCTATTTAATCATTGGTGTTGACTTTGTATACTATTCCGTTGTAGTTGTA
AATACACGATCTTTTCGTAGATCCATTGTAATCTTGAAATTCTATAAAAATGGAAACAGCAACTTTAGTCGCCATCTCCA
TATCTGGTTTACTTGTAAGCTTTACTGGGTATGCCTTATATACCGCGTTTGGGCAACCCTCTCAACAATTAAG--AGAT-
---CCATTCGAAGAACACGGAGACTAATTTAAGTAAGAAGTCCCCCTATCTGGGAGACTTCCTAGTTTTAGTTAGTAGAA
ACCTAATTGGTTAAAATTCCGTCCAGTAAAACGGAAGAATTATAAATTTCTAAAATGATAGATAGGAATATAGCGAATAA
AGCCATTGCGACCCCCATAAAAGGAGTAGTCCCCCAACCCGGGGCGACTTTCCCATATTCCGAATTCAAGGGTTTCAGTA
AACTACCTGCACCAGTTCGTTTTGGCCTAGGTTTAGAACTATCTTCAACGGTTTGTGTAGCCATAAATTCTATTTAATCA
TTGGTGTTGACTTTGTATACTATTCCGTTGTAGTTGTAAATACACGATCTTTTCGTAGATCCATTGTAATCTTGAAATTC
TATAAAAATGGAAACAGCAACTTTAGTCGCCATCGCCATATCTGGTTTACTTGTAAGCTTTACTGGGTATGCCTTATATA
CCGCGTTTGGGCAACCCTCTCAACAATTAAGAGATCCATTCGAAGAACACGGAGACTAATTTAAGTAAGAAGTCCCCCTA
TCTGGGAGACTTC-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------TTACTTAAATGAAATTATTTTATTCTTTTAGTTGGAGTTGGTGGAACCTTAGGTGGTTCTCGGA
AGAAGATAGCGAAAAAAATTATCCCTAAAGTCGAAACTAAAAGGAACGTATAAACCAATGCTTCCATAGATTCGATCCTG
GTTTATTTACAATTATAACTTCCACACCTATTCATTTGTCATTTGGGATAATTTCCCATATAAA----------------
-GAA------------AGAAAAAGAGTCAAAGAAAGGATGGGAGATGTTTCCCATGTCAAATCAAAAAAGAGAGGTG---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------A
AAGATACTATA--------------ACAATGTGTATCAGGCTGCCTGTTTCCTTGTAGTTGTAAATACACGATCTTTTCG
TAGATCCATTGTAATCTTGAAATTCTATAAAAATGGAAACAGCAACT---TTAGTCGCCATCTCCATATCTGGTTTACTT
GTAAGCTTTACTGGGTATGCCTTATATACCGCGTTTGGGCAACCCTCTCAACAATTAAGAGATCCATTCGAAGAACACGG
AGACTAATTTAAGTAAGAAGTCCCCCTATCTGGGAGACTTCTTACTTAAAT-----------------------------
--
>chr1D_1038
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------GTTTACTTGTAAGCTTTACTGGGTATGCCTTATATATCGCGTTTGGG
CAACCCTCTCAACAATTAAGAGATCCATTCAAAGAACACGGAGACTAAT---TTAAGTTAGAAGTCTCCCCACCTGGGAG
ACTTCTTACAAA--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------ATACCTTTAATACCAGGCATTTTTATATAAGGTGCCCACACATTCAAAT-
---AAATTTGACCAACAATTAGACCAATAAAATGTCGGTTATGTGACATGAAAG--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------AGATATCATTTAGGAATTCAACGATATTAATTTTGTGTCACAGAACTAAAA
TATTATCGGTCTAGCTC---------------------------------------------------TTGGTCAAACTG
AATGTTTGAATGTG----------------------TGGGTGCCTTGTATTTTAGAACAAAAGAGTACTACAAATACAAA
GGTGAAGTTGCAGATAGCAGCTCGCATCTTTAGTTACTTCGCTTCA--------------------------TTCTAATA
ACACATAACATATCAATTACCTATATGAAATGGCTTAAGTGA--------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------TCATAACTCATAAGAAAAGGAAGATGT
TGGA------------AGATAATGAGTGAAACAACGACGATGGTGATAACATACTCAAGATGAGGAGGAAATGAATAATC
CACACCAAGCCTAGAAGCGATCGGTTCGGCAGTTGATGTAGGATTCTC--TTGATTCTGGGAATTCGTACTTGGCACTTG
AGGCATCCCATGAGCTAATTCCTCTTGATGCTTCTCGTTCACATTCTTGGCATTTGGCTGGTTTGCTCTCTCAACTATCA
GTACTTTCCCAAGGATTCTGAACCTGCCAAAACCAGCCCTTAGCGGAAAAAAAAACAA-----------TGAAGGACAGA
AATTCACAAAA--------------ACAATTCATATTCCGCAGCTAGTTCGAACAAAGAAAATGTACAACTAATCAAGCA
GAGCGTGTACTTGAG--GAAAGGAACCTGTTCAACACAGACTGCGCCTGATTGGCCGCCATATCGTCCCTAAAATCCACA
AATGCACAGTTCCTCAGCCTGT---------------------------------------------------AACGGTG
AAAATAGTTTCAGTAAAAAATATACCACATGTGTTACCTAGACGAACAGACAAATCTCAGTATACCTAAAGAACTTCTTT
TG
>SNPs
---------S-----S--------------------------------------------------S-------------
------------------------------------S------------------------------------S------
--------------------------------------------------------------------------------
-----------------------------S-------------------------------------------------S
S------------S-----------------------------SS-----S-----------------------------
------------------------------S--------S-----------------------------------SSSSS
SSS------------------------------------------------------S------------------S---
----------------S-----------------S---------------------------------------------
------------------------------------S---S-----------------------S-S------S------
------------------------------------------S-------------------------S-----------
---------------S------------S----------------------S-----S-----S----------------
--S----------------S------------------------------------------------------------
----------------SSSSSSSSSSSSSSSSSSSSSSSSS---------------------------------------
--------------------------------S---------------------------------------S-------
----S------------------------------S-------------SSS-------S--------------------
--------S-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------S---S---------S------------------------S-----
---------------S-S------------------S-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------S-----------------------------------------
------S-------------------------------------------------------------------------
--------------SSSSSSSS-----S----------------------------S-----------------------
------------S------------------------------S----------S-------------------------
---------------------------S-------------S--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------S---------S-------S------------------------------------
--------------------------------------------------------------------------------
--------S--------------------------------------------------S--------------------
-----------------S----------------------------S-----------SSSSSSSSSSS-----------
---------------------------------------S---S---------------S--------------------
---SS---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------S-----------------S-----------------
--
>forward_577
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------AAG
AATTGGTTGGCCTCGTG---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--
>reverse_2978
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------TTGAACCTGCCAAAACCAGC-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--
