>input_sequence_87456
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------------------ATGGACAAGGTGAAGAGCCATGGCAGCAAGCAAAGGCGGT---CAGGAA---GAGGAAGGAT
CAGCAGGATGTTGAGGCAACAAAAGGCCAGGCTCTACATCATCCAGCGATGCGTCGTCATGCTCCTCTGCTACCATGACT
GA------------------------------------------------------------------------------
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----------
>chr1A_1_TraesCS1A01G371300
TTTGATAAACATATTTTATCTTTACTGACTCAATTAAGGCATTAGTGTTTGTTCTATTGCACAAAAAAGATCGCATTTTT
GCACTTCGTTCAAATAAGAGTTGTACCGGACGGAATTATCCTCTTTCTCAGTATGATCTCTGTTCCATTTTTATTATCTG
TACGGTCGGAGGCTCGGAGCATGATTCCTGGTCTCTACCTAATTGTGAATGAGAATATGCATCCTTGGGGAGTGTTCTTA
CTTCATTCAA--------GGTGTGAACTATTACAAACACATTGCCATCTCGAAGGCGTGCATTTCGTGAATCCGCATTAC
TTTTTTTTTTGAAAAGGAGGATTACCCCCGGCCACTGCATCTGAACGATGCATGCAACCATTTTATTAATTATTCACAAA
GACCTTACAAAGTAGCAAGAGTAGGTTGCAAATTTGCTCAAAATTCAAAGTAGCTGTAACACGAGCAGATTAAGCTTTGT
TTAG--AAGAACGAACAGGTTAAGTTGTAGTACATGGCTCATGGAAAAA-------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------TTATTA--------TTTGCTCTAGAAAAGATTATT
GTTCCTGAAGTTGACAGTAA------------------------------------------------------------
------------------------------------------------AATTTCCTG-ATGCTAAATGGTATAATCGGAA
AACTG---GCAGCAGCATCACATATATGT----------------------TAGTTCAGTATACAGGGGCAAATTTACTC
GCATTCGAATCAGCTGTCACCTTGAGAGAGGGTGCCTGC--GT-------AGCAGCTCCACACTTCTACAAGGGGTATAT
GCCCCCATTCCCATCTCTCTGCCCAATGCCTCGCTGTCTCTCTAATCTCTA------------------TCACCAGATTT
TTATACGCGCAAGTAGGCAAAGAGGTGAGGATCATGTGAGCGAGCCTGTCACTGTGCCATTTGGCCTTGACCCTCCTATA
TAAGCACGCCAAATGCTGCACATTTGGCCACAACCACAGCAGAGACAGATCCACCCAGC--AGTAGCAGTG---------
------------------GGAGAGCAGAGCAGGGAGCCC----TCCAG-------CT---CACCTAGTTCAGCCACCCTC
CTGCTCTGTTCAGCCAGTATGGACAAGGTGAAGAGCCATGGCAGCAAGCAAAGGCGGT---CAGGAA---GAGGAAGGAT
CAGCAGGATGTTGAGGCAACAAAAGGCCAGGCTCTACATCATCCAGCGATGCGTCGTCATGCTCCTCTGCTACCATGACT
GACCATAGTCCATAGGCGTTCGGTTCT----------------CGTTTGTAGCTAGGCTAG-------GCTTGACAGATT
CTTTGGTGTGTGTGTGTGTGTGTGTTCATAGGGTGTAAGT--------------------------TGTTCAGAAGTTTC
AGGTTGATTTTGCTGACGGTTAGTTTGGATG-TTGAAGTTTTGTGTGGTGTTATGTGGTGCTCCTAAGTCCTGCAACGGC
AAGGA-----------TGTGCGTGTATCGATG----TGTTAGGTCTTGGCATCTTTGTTGTGAATTTGCTCGATCAGAAA
AAGAAGATCTCTGAAAAAGCAAGAATAGC-----ATGAAAGTTCTCAGAACGGTTATCTCTTGGCATCCCATCATTGTAT
GATCAGTACTG-------TTAAATCATGGTTGCGAGTCTATGCCTAGTTACCACATTGCTAATGCATATATGCATCCTTT
GGAAATGTTTTTATTCGATTGGATTGGGTATGTTGTTCGACTGATTTAGCACACAAGGG--------------TATCTCA
AAGGTGTGCATTTTGGGAATTTGTGGCAATATCGAGGTGAAACTGGCAAGAGCAGTCTGCATAT--------TTGATCAA
AATTC-AAATACTTTTATACACAACCAAAAGAAAATTCAAATATGTAA-AATTATGATTTCTGAAGATACATTTCCCTGA
TGCTGACAGTTTTCTTTGAGTTCAGTATTTCTGATAGTAACCTCAACTTAGAACTTAGAACTGTAGTGCTCATGGGATTT
CCTAAAAAAGAACTCCTTGCTCATG---GGA--------CTACTGGCTTTCTAGCAATAC-----TATACAGAATCAGTT
TATCTAGCAACCTCCTTGCTCATGGTTCATTCTATATCAGCTTTTGAATTTTTAATGCCTCAAAAATG-TTTGGTAAAAC
CGAACAGCGCTGGACGACAGAAATGGGAAGCTTCAAGGAACTTGCATACATGCT----------CTGCAAATCTCTTGGT
CTTAATTTTTTCAGACGCACAGCTCACTGCGAGCAGATCTCGTCTGGTGCTACTGTGCGTTGTTATTTTCATGGCGACTA
GATTATCAGA
>chr1D_1
TTTGATAAACATATTTGATCTTTACCGACTCAATTAAGGTATTAGTGTTTGTTCTGTTACACAAAAAAGGTCGCATTTTT
GCACTTCGTTCAAATAAGAGTTGTACCGGACGGAATTATCCTCTTTCTCAGTATGATCTCTCTTCCATTTTTATGATCTG
TACCGTCGGAGGCTCGAAGCATGATTGCTGGTCTCTACCTAATTGTGAATGAGAATATGCATCCTTGGGGAGTGTTCTTA
CTTCATTCAATTATCAGTGGTGTGAACTATTACGAACACATTGCCATCTCGAAGGTGTGCATTTCGTGAATCTGTATTAC
TG------------------------------------------------------------------------------
--------------GCAAGAGTAGGTTGCAAATTTGCTCAAAATTCAAAATAGCTGTAACACGAGCAGATTAAGCTTTGT
TTAG--AAGAACGACCAGATTAAGTTGTAGTGCATGGGTCATGGAAAAATTATGAGTGAAGTGCACTGTAGGTCCTTGAA
CTATTGCAGGGGTGTCACGTATAGGTCCTCGAACTATGAAAATCGTCATCCAGGTCCTCGAAGTGCAGTAAGTGTGTCAT
TCAGGTTCAAAATCTCCCTGACCCCCTCTAACTGGCCAGCTGGCGCCGTTAACCGTGAACACCGAATAGTAAACCATGAA
CAGTAAAATAGCGTACCAGTTCGGACATCATTTTCTGTACGCGATAGACAGTGCATGATGAACGATAAAAAAACAATCTG
AAATTCTTTGGCATTGAAGATACCCTGGTGTGTGAACAGTAAAAAATGTTCATTAATTCAAAAAAATGTTCACGAATATG
GAAAAGTTATTCACGACTTTAGAAAAATGTTCACGAACAATAAATTTGAAAATATGTTCGCCAACCACAAATATTATTCG
CGGTATGGAAAAAATGTTCACGGCTTTAAAAAATGTTCACTAATCGCTAGTGAACATTTTTTAAGGTCGCGAATATCTTT
TCCAAATTCATCGTTTGCGAATATTTTTTTAAGTCACAGACATTTATTAAAGTTGCGAATATTTTTCCAAATTCATAGTT
CACGAACATATTTTTAAAGTCGCGAACATTTTATTAAAGTCACGAATATTTTTCCAAATTCATCATTCGCAAACATTTTT
TTAAAGTCGTGAATATTTTTTCCAAATTCATCGTTAGCGAACATTTTTCTAAAGTCGCGAATATTTTTTTCCAAATTCAT
CGTTCGCAAATATTTTTCTGAATTAATGAACATTTTTACTGTTCATCATGCACTGTTTATCGCTTGCAGAAATGATGTTC
GGAACTGAACGCTATTTTACTGTTCACGGTTCAATGTTCACGTTTAACGCCGCCAGCTGGCCGGTTAGAGGGGGTCAGGG
AGATTTTGGACCTGAATGACACACTTACTGCACTTCAAGATTCTGGATGACGATTTTCATAGTTCGAGAACCTACGTGAC
ACCCATAAAATAGTTTGAGGACCTACAGTGCACTTCACTGAAAAATTATTA--------TTTGCTCTAAAAAAGATTATT
ATTCATGAAGTTGGCAGTAA------------------------------------------------------------
------------------------------------------------AATTTCCTG-ATGCTAAATGGTTTAATCGGAA
AATTGGCAGCAGCAGCATCACATATATGT----------------------TAGTTCAGTATTCAGGGGCAAATTTACTC
TCATTCGAATCAGCTGTCACCTTGAGAGAGAGGGTGCCCTTGT-------AGCAGCTCCACACTTCTACAAGGGGTATAT
GCCCCCATTCCCATCTCTCTGCCCAATGTCTCGCTGTC-------TCTCTA------------------TCACCAGATTT
TTATACGTGCAAGTAGGCAAAGAGGTGAGGATCATGTGAGCGAGCCTGTCATTGTGCCATTTGGCCTTGACCCTCCTATA
TAAGCATGCCAAATGCTGCACACTTGGCCACAACCACAGCAGAGACAGATCCACCCAGC--AGTAGCAGTG---------
------------------GGAGAGCAGAGCAGGGAGCCC----TCCAG-------CT---CACCTAGCTCAGCCGCCCTC
CTGTTCTCTTCAGCCAGGATGGACAAGGTGAAGAGCCATGGCAGCAAGCAGAGGCGGT---CAGGAA---GAGGAAGGAT
CAGCAGGATGTTGAGGCAACAAAAGGCCAGGCTCTACATCATCCAGCGATGCGTCGTCATGCTCCTATGCTACCATGACT
GACCATAGTCCATAGGCGTTCGGTTCT----------------CGTTTGTGGCTAGGCTAG-------GCTTGACAGATT
CTTTGGTGTGTGTGT----------TCATAGGGTGTAAGT--------------------------TGTTCAGAAGTTTC
AGGTTGATTTTGCTGACAGTTAATTTGGATG-TTGACGTTTTGTGTGGTGTGATGTGGTGCTCCTAAGTCCTGCAACGGC
AAGGA-----------TGTGCGCGTATCGATG----TGTTAGGTCTTGGCGTCTTTGTTGTGAATTTGCTTGATCGGAAA
AAGAAGATCTCTGAAAAAGCAAGAAAGAAATAGTATGAAAGTTCTCAGAAAGGTTATCTCTTGGCATCCCATCATTGTAT
GATCAGTAC-------TGTTAAAGCATGGTTGCGAGTCTCTGCCTAGTTACCTCATTGCTAATGCATATGTGCATCCTTT
GGAAATGTTTTTATTTGATTGGATTGGGTATGTCGTTCGACTGATTTAGCACACAAGGC--------------TATCTCA
AAGGCGTGCATTTTGGGAATTTGTGGCGATATCGAGGTGAAAGTGGCAAGAGCAGTCTGC----AT----CTTTGTTCAA
AATTC-AAATAGTTTTACACACGACCAAAAGAAAATTCAAATATGTAATAATTATGATTTCTGAAGATACATTTCCCTGA
TGCTAACAGCTTTCTGTGAGTTCAGTATTTCTGATAGTAACCTCAACCTAGAACTTAGAACTTTAGTGCTCATGGGATTC
CCT-AAAAAGAACTCCTTGCTCATG---GGA--------CTACAGGCTTTCTAGCAATAC-----TATACAGAATCAGTT
TATCTAGCAAAGTCCTTGCTCATGGTTCATTCTAAATCAGCTTCTGAATTTTTAATGCCTCAAAAATG-TTTGGTAAAAC
CGAACAGCACTGGACGACAGAAATGAGAAGCTTCAAGGAACTTGCATACATGCTGCATTGTTTGCTGCAAATCTCTTGGT
CTTAATTTTTTCAGACGCACAGCTCACTGCGAGCAGATCTCGTCTGGTGCTATTATGCGTTGTTATTTTCATGGCGACTA
GATTATCAGA
>chr1A_407
--------------------------------------------------------------------------------
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--------------GCAAGAGTAGGTTGCAAATTTGCTCAAAATTCAAAATAGCTGTAACACGAGCACATTAAGCTTTTC
TTAAGAAAGAACGACCAGATCAAGCTATACATG-----------------------------------------------
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---------------------------------------AAAAGAAAAATTCTGGCCCTTTTGCTCTAAAAAAGATTATT
ATTCCTGAAGATGGCAGTAACGTTTCCACGATATTTTGGCATGAAAACTTGCAATAACCTACAAAATTTAACCATCTTTG
ATGTTGCAAAGTTTCAAATTTTTTTGAATTTGTTTTCTATTTTTTTTGAATTTACTG-TTCATAGAGGGTGCCTAGGCAC
CCGGGAGCTGTTACACCTTTCTGAAACGTATTATAACAAGTTACAAAGGAGTAGCTCAACATACAGGGGCAAATTTACTG
GCATTGGAATACGCTGTCGCCTCGAGAGAGGGTGCTGCATGTGCATGTGGAGCAGCTTCACACTTGTACAAGGGGTATAT
GCCCCCATCCCTAGCTCTCTGCCCAATGTCTCTCTCTC-------TCTCTCTCTCTCTCTCTCTCTCTCTCACCAGGTTT
CTATACGTGCAAGTAGGCAAAGACGTGAGGATCATGTGAGAGAGTCTGTCATTATGTCATTTAGCCTTGACCGTCCTATA
TAAGCACGGCAAATC---CACACTTGGCCACAACCA---------------------------CAATAGTG---------
------------------GGAGAGCAGAGCAGGGAGCCC----TCCAGGCTCCAGCT---CACCTAGCTCAGCCACCCTC
ATGCTCTGTTCAGCCAGGA---------TGGACAGCCATGGCAGCAAGCCCAAGGGGT---CAGGAAGAGGAGGAAGGAT
CAGAAGGATGCTGAGGCAACACAAGACCAGGCTCTACATCATCCAGCGATGCGTCGTCATGCTCCTCTGCTACCATGACT
GACCACAGTCCATAGGCGTTCGGTTCTTCGTTCGGT----TCTCGTTTGTACCTAGGCTAG-------ACTTGACAGATT
ATTTGGTGTTTGT-------------------GTGTGTGT--------------------------AGTTCATAAGTTAC
AGGTTGATTTTTCTGACGGTTAGTTTGGGTG-CTGAAGTTCCGCGTGGTGTAATGTGGTGCTCCTAAGGCCTGGAACGGC
AAGGATGTGCGTGTATT-----------GATG----TGTTAGGTCTTGGCATCTTTGTTGTGAGTTTGCTCGGTAAGAAA
TGAAAGATCTCGGAAAAAGAAAGAAATAAATAGTGTGAAAGTTCTCAGAAAGGTTATCTCTTGGCATCCCATT-------
----------------------------GTTGTGAGTCTCTGCCTACTTACGTAATTGCTAACGCACATATGCATCCTTT
GGG----------------TGTATTGGATCGGTTTTTTGAACGATTTTGCACACGGCGCCATCAGTCTGTACATATCTCA
AAGGTGTGCATTCTCGGATTTCTTAGCGATATCGAGGCGAAATTGGCAAGATCAGTCTGTACATAT----CTTTGTTCAA
AATTT-AAATAGTTGTACACACGACCAATAGAAAATACAAATAAGCAATAATTATGATTTCTGAAGATACATT-------
-------------------------------------------------------------------GCTCATGTGATCC
CCT--AAAAGAACTCCTTGCTCGTG---GGATGGGAGGACTAGTGGCTTTCCAACAGCAC-----TATACAGAATCAGTT
TATCTAGCACACTCCATGCTCATGGTTCATTCTGTATCAGCTTTTGAATTTTTAATGCAACAAAAATGTTTTGGTAAAAC
CGAACAACACTGGACGACAGAAATGAGAAGCTTCAAGGAACTTGCATGCATGCTGCTC---------CAAATCTCTTGGT
CTTGATTTTCTGAGACGCACAGCTCACTGCGAGCAGATCTCATCCGGAGCTATTATGGGTCGTTATTTTCACGGTGACTA
GATTATC---
>chr1B_408
--------------------------------------------------------------------------------
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---------------CAAGAGTAGGTTGTAAATTTGTTCTAAAAGATA------TGTAACACGAGCAGATTAAGCTTTGT
TTAG--ATGAACGACCAGATTTAGTTTTACATG-----------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------GAAAAAAGTATA--------TTTGCTCTAAAAGATATTATC
ATTCCTGAAGTTGGCAGTAA------------------------------------------------------------
------------------------------------------------AATTTCCACCATGCTAAATGGTTTACTCGGAG
TAT------------------ATGTATGT----------------------TAGTTCAGTATTCAGGGGCAAGTTTACTC
ACATTCGAATCAGCTGTCACCTTGAGAGAGGGTGCCTGC--GT-------AGCAGCTCCACACTTGTACAAGGGGTATAT
GCCCCCATTCCCATCTCTCTGCCCAATGTCTCGCTGTC-------TCTCTA------------------TCACCAGATTT
TTATACGTGCAAGTAGGCAAAGAGGTGAGGATCATGTGAGCGAGCCTGTCATTGTGCCATTTGGCCTTGACCCTCCTATA
TAAGCACGCCAAATGCTGCACACTTGGCCACAACCA---------------------------CAGCAGAGACAGATCCA
GCCAGCAGTAGCAGTGGAGGAGAGCAGAGCAGGGAGCCC----TCCAG-------CT---CACCTAGCTCAGCCGCCCTC
ATGTTCTGTTCAGCCAGGATGGACAAGGTGCAGAGCCATGGCAGCAAGCAGAGGTGGT---CAGGAA---GAGGAAGGAT
CAGCAGGATGTTGAGGCAACAAAAGGCCAGGCTGTACATCATCCAGCGTTGCGTCGTCATGCTCCTCTGCTACCATGACT
GACCATAGGT-------------------GTTGTGT----TCTCATTTGTAGCTAGGCTAGCTTGAGTACTTGACAGATT
CTTTGGTGTGTGTGT----------TCATAGGGTGTAAGT--------------------------AGTTCAGAAGTTTC
AGGTTAATTTTGCTGACGGTTAGTTTTGGTG-TTGAAGTTCTGCGCGGTGTAATGTGGTGCTCCTAAGTCCTGCAACGGC
AAGGA-----------TGTGCGTGTATCGATG----TGTTAGGTCTTGGCATCTTTGTTGTGAATTTGCTTGATCAGAAA
TGGAAGATCTCAGAAAAAGAAAGAAGAAAACAGTGTGAAATTTCTCAGAAAGGTTATCTCTTGGCATCCCATCATTGTAT
GATCAGTACTGTTAATTGTTAAAGCATGGTTGCGAGTCTCTGTCTAGTTACCTCATTGCTAATGCATATATGCATCCTTT
GGAAATGTTTTTATTCGATTGGATTGGGTATGTTGTTCGACTTATTTAGCACACAAGGC--------------TATCTCA
AAGGTGTGCATTTTGGGAATTTGCGGCGACGTCGAGGTGAAACCGGCAAGAGCAGTCTGC----AT----CTTTTTTCAA
TATTC-AAATAGTTTTACACACAACCAAAAGAAAGTTCAAATATGTAATAATTATGATTTCTGAAGATACATGTCGCTGA
TGCTGACAGCTTTCTCTGAATTCAGTATTTCTGACAGTAACCTCAACTTAGAACTTAGAACTGCAGTGCTCATGGGATTC
CCT---AAAGAACTCCTTGCTCATG---GGA--------CTACAGGCTTTCTAGCAATACTATACTATACAGAATCAGTT
TATCTAGCAACCTCCTTGCTCATGGTTCATTCTATATCAACTTTTGAATTTTTAATGCCTCAAAAATG-TTTGGTAAAGC
CGAACAGCACTGGACGACAGAAATGAGAAGCTTCAAGGAACTTGCATACATGATGCATTG-TTGCTGCAAATCTCTTGGT
CTTAATTTTTTCAGACGCGCAGCTCACTGCGAGCAGATCTCGTCTGGTGCTATTGTGCGTTGTTATTCTCATGGCGACTA
GATCATC---
>chr1D_624
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---------------------------------------------------TAGCTCAATATACAGGGGCAAATTTACTG
GCATTGGAATACGCTGTCGCCTCGAGAGAGGGTGCTGCATGTGCCTGTGGAGCAGCTCCACACTTGTACAAGGGGTATAT
GCCCCCATCCCCAGCTCTCTGCCCAATGTCTCTCTCTC-------TC------------------TCTCTCACCAGGTTT
CTATACGTGCAAGTAGGCAAAGACGAGAGGATCATGTGAGAGAGTCTGTCATTATGTCATTTAGCCTTGACCGTCCTATA
TAAGCACGGCAAATC---CACACTTGGCCACAACCA---------------------------CAGCAGTG---------
------------------GGAGAGCAGAGCAGGGAGCCC----TCCAG-------CT---GACCTAGCTCAGCCACCCTC
ATGCTCTGTTCAGCCAGGA---------TGGACAGCCATGGCAGCAAGCACAAGGGGT---CAGGAAGAGGAGGAAGGAT
CAGAAGGATGCTGAGGCAACACAAGACCAGGCTCTACATCATCCAGCGATGCGTCGTCATGCTCCTCTGCTATCATGACT
GACTATAGTCCATAG-TGTTCTGTTCTTCGTTCGGT----TCTCATTTGTACCTACTCTAG-------ACTTGACAGATT
ATTTGGTGTGTGTGTGTGT-------------------GT--------------------------AGTTCATAAGTTTC
AGGTTGATTTTGCTGACGGATAGTTTTGATG-TTGAAGTTCTGTGTGGTGTAATGTGGTGCTCCTAAGGCCTGGAACGAC
AAGGA-----------T-----------GATG----TGTTAGGTCTTGGCATCTTTGTTGTGAATTTGCTCGACAAGAAA
TGAAAGATCTCAGAAAAAGAAAGAAAGAAATAGTGTGAAAGTTCTCAGAAAGGTTATCTCTTGGCATCCCATT-------
----------------------------GTTTTGAGTCTCTGTCTACTTACATAATTCCTAACGCGTATATGCATCCTCT
GGGAATGTTCTTATTCAATTGGATTGGATCAGTTTTTCGAACGATTTTGCACACGGCGC--------------CATCTCA
AAGGTGTGCATTCTCGGAATTTTTAGCGATATCGAGGTGAAACTGGCAAGATCAGTCTGTATATAT----CTTCGTTCAA
AATTC-AAATAGTTATACGCACAACCAAGAGAAAATACAAATAAGCAATAATTATGGTTTCTGAAGATACATT-------
-------------------------------------------------------------------GCTCATGGGATCC
CCT--AAAAGAACTCCTTGCTCATGGGAGGA--------CTAGTGGCTTTCCAGCAG-----TACTATACAGTATCAGTT
TATCTAGCACACTCCATGCTCATGGTTCATTCTGTATCAGCTTTTGAATTTTTAATGCAACAAAAATGTTT-GGTAAAAC
CGAACAGCACTGGATGACAGAAATGAGAAGCTTCAAGGAACTTGCATGCATGCTGCTC---------CAAATCTCTTGGT
CTTGATTTTTTGAGACGCACAGCTCACTGCGAGCAGATCTCATCAGGAGCTATTATGCGTCGTTATTTTCATGGTGACTA
GATTATC---
>chr3B_903
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-------------------------------------AGCAGAGGCAGACCAATCCAGTATAGCAGCAGTG---------
------------------GAAGAGCGGAGCAGTGAGCCTTTCTTCCAG-------CTCACCACCTAGCTCAACCATCACC
TTTT--TGTTCAGCCAGGATGAACAAGGTGAAGAGCCATGGCGGCAAGCACACGGGGTCAGCAGGAG---GAGGAGGGAT
CAGCAGGATGCTGAGGCAACACAAGGCCAGGCTCTACATCATCCGGCGATGCGTCGTCATGCTCCTCTGCTACCATGACT
GACCC---TACATTGCTGTCCTGTTCTTCGTTTGATCCTCTCTCGTTTGTAGCTAGGCTAGCTAGGCTTA--GACAGATT
CTCTGTTGTGTGTATGTGT------TCATAGGGTAGTGT-----------------------------------AGGCTT
AGATAGATTTCGCTGCCGGTTAGTTAGGAATCTTGAAGTTTTGTGTGGT--GATATGGTTCTCCTAAGTCCTGCAACGGC
AAGGA-----------TGTGCATGTAGTATCTGACATGTTTGGTCTTGCCATCTTTGTTCTGAATTTGCTCCATCAGTAA
TGGAAGGTCTCAGAAAAA--------------------------------------------------------------
--------------------------------------------------------------------------------
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----------
>chr1B_948
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-------------------------------GGGAGCCC----TCCAG-------CT---CACCGAGCTCAGCCACCCTC
CTGCTCTGTTCAGCTAGGATGGACAAGGTGAACAGCCATGGGAGCAAGCACAAGGGGT---TAGAAAGAGGAGGAGGGAT
CAAAAGGACGGTGAGGCAACACAAGACCAGGCTCTACATCATCCAGCGATGCGTCGTCATGCTCCTCTGCTACCATGACT
GACC---------------TCCGTTCTTCGTTCGGT----TCTCGTTTGTAGCTAGGCTAG-------GCTTGACAGATT
CTTTGGTGTGTGTGTGTGT-------------------GTGTGTGTGTGTGTGTGTGTGTGTGTGTAGTTCATAA--TTC
AGGTTGATTTTGCTGACGGTTACTTTTGATG-TTGAAGTTCTGCATGGTGTAATGTGGTGCTCCTAAGGCCTGGAACGGC
AAGGA-----------TGTGCGTATATCAATG----TGTAAGGTCTTGGCATCTTTGTTGTGAATTTGCTCGAT----AA
TGAAAGATCTCAGAAAAAGAAAGAAAGAAATAGTGTGAAAGTTCTCAGAAAGGTTCGCGTTTCAAATAGTGTGAATTTGC
C-------------------------------------------------------------------------------
----------TTGTACAATTGGATTGGATCATTCTTTTGAACGATTTTGCACACAAGGC--------------CATCTCA
AAGGTGTGCATTCTCGGAAGTTTTAGCGATATTGAGGTGAAACTGGCAAGATCAATCTGT----ATATATCTTCGTTCAA
AATTCGAAATAGTTGTACACACAACCAATAGAAAATACGAATTAGCAATAATTATGATTTCTGAAGATACATT-------
-------------------------------------------------------------------GCTCATGGGATCC
CCT--AAAAGAACTCCTTGCTCATG---GGA--------CTACTGGCTTTCCAGCAG-----TACTATACAGAATCAGTT
TATCTAGCAAACTCCATGCTCATGGTTCATTCTATATCAGCTTTTGAATTTTTAATGCAACAAAAATGTTT-GGAAAAAC
CGAACAGCACTGGATGACAGAAATGAGAAGCTTCAAGGAACTTGCATGCATGCTGCTC---------CAAATCTCTTGGT
CTTGATTTTTTGAGACGCACAGCTCACTGCGAGCAGATCTCATCCGGAGCTATTATGCGTCGTTATTTTCATGGTGACTA
GATTATC---
>SNPs
----------------S--------S-------------S---------------S--S----------S----------
-------------------------------------------------------------S------------S-----
---S------------S---------S-----------------------------------------------------
---------------------------------S---------------------S----------------S-S-----
-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSS-----------------------------------S------------------------------
--------------S---S------------S-----S------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------S-----------
S------------S------------------------------------------------------------------
----------------------------------------------------------------------S---------
--S-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------S---------SSSSSSS-----------------------------------
-------S-------------------------------------------S----------------------------
----------------------S---------------------------------------------------------
-------------------------------------------------------------------S------------
-----------------S--------------------------------S-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------SSSSSS-------------------------------------------------------
---------------------------------------------------S----------------------------
--------------------------------------------------------------------------------
-------------------------S-SS---------------------S-----------------------------
-----------------------S---------------S------------S---------------------------
----------------------------------------------------------S---------------------
---------------------------S-----------------------------------------------S----
-----------S-----S--------------------------------------------------------------
---------S-----S---------------------------------------------------------------S
---S----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------S----------------S------------------------------------------------------
----------------------------------------------------S---------------------------
----------
>forward_1963
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-----------------------CAATGCCTCGCTGTCTCTCT-------------------------------------
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>reverse_3369
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--------GCTGGACGACAGAAATGGGA----------------------------------------------------
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----------
