>input_sequence_87438
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-----------------------------------------ATGAAATCGAAAATATTCCAAGATGGCAAATATTCGGAG
ATGACTATGAAAACACCTCTCTGGATCCCCGAATTGAAAGAGAGATTGAAAGGGATCAAGAATCCTAATTCTCGCTATTT
GGAATGGATCCAATTCTATTGA----------------------------------------------------------
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>chr4A_1_TraesCS4A01G153900
AAAGGTAGGGCATTTCCCATTGATATAGGAACTTTTGTACCAGAAACAATAGTATCTCCAATTATAGCCC-TCTAGGATG
TAAAATATATCTGTTCTCACCATCCCCATAGTGTATGGGACAAATGTATGCATTTCAATTAGGGTCGTATTCTATGGTTA
TGATTCTACCAGATATGTCTTTTTGATTCCGTCGAAAATCTATTTTACGGTATAGGCGCTTATGACCTCCGACTCTATGC
CTTGCGGTAATGATTCCTCTAGAATTACAACCTTTACCACAACGGTACCATCCATGGATCAAATTATTTCGTGGATTGGA
TTTCACTTGCCTGTCTACGGTTCCCTTGCGTGTGCTCGGGATAGGTGTTTTGTATATATGTTTCACCGTATTATTAAGTA
TTCTCTTTTAGTTTTTTTCTCTATCTAGAAGTGGAATAGAATAACCCGGTTGAAGGGTAATGATCATACGTTTGTAATGC
ATTGTATGGCCCAGAATAGGTCCTATTCTTCTACCTTTTCCAGGTAGTCGATGGCTATTCACAGCTACCACCTTAACACC
AAAGAAGAGTTCGACCCAATGCTTTATTTCTGTCTTAGTGAATCCCGATTCAACATTAAAAGTATATTGATTCTTGCCCA
ATAAACGAGGACTTTTTTCTGTAAATACTGCGTATTTGATTCCATCCATAAATCGACTTTCCCTCCTATTCTTTGAGTTC
TAGTATCGATAAGAATTCGAGTTCTTATTGTTCTTATGTTATGGTATGAATACACCATACCAATTCGTTATGTATGGATG
ATGGATGAGATTCCATGGATAGAGAGCCAGTTCCAATAGACTTATGGAATGTTCCCGTTCGTGTGCATCCAGCAGGAATT
GAACCTGCAAATTTACCAATTATGAGTTGGGCGCTTTAACCATTCAGCCATGGATGCTTAACAGGGATCATCGTACATCG
TAAGTAACCAATTTTCATATAGAAAGACATACCATAGAAAAATGAAATCGAAAATATTCCAAGATGGCAAATATTCGGAG
ATGACTATGAAAACACCTCTCTGGATCCCCGAATTGAAAGAGAGATTGAAAGGGATCAAGAATCCTAATTCTCGCTATTT
GGAATGGATCCAATTCTATTGAGTCTGACTCATAGTGATCATTTCTCTTTAGCAAAGAATGACCTTGGTTATCAAAGGAT
TGAACAACCGGGATCCATTTCCTTATGATACCTAGTTGGCATTGACAACAAGGATCTAATGAATTATGAGTTTAATAGAT
CCTCTTTAGCAGAAAGACGTATATTCCTTGCTCATTATTAGAAAATCACTTATTCCCAAACCTCGTGTGGGACTAATCGT
TTTCATTTACCTTCTCATGGAAAACCCTTTTCGTTCCGCTTAGCCCTATCGGGTA-TTTTAGTGATAGGTTTTGTAGGAA
CTGGACGATCCTATTTGGTCAAATACCTAACGAAA-ATTACGATTTTCCTTTCATTAAGGTACGAGGGCTTCTTATTCCA
CAAGAACGAAAGTACCTTTTCATTCTTTCATATGCTAGGGGTTTTTACTTGGAAAAGACAATGTTCCATACTAAAGAATT
CGGTTCCATAACCACGAGTTCCAGTGCACTAGATCTTGTAGCACTTAGCAATGGAGCCCTATCCATTAGTATTCCACATA
AGAAATCCATTCTAGAAAAAAATACAATTAGATTAGCCCTTCATAGACAAACTTGGGGTTTGCGAGCCAAGGTAAGATCA
GCTCGGGATCATGGGACCCTTTTCTATCAGATAGGAGGGGCTCTTGTACAAAATAGACTTACTAAGTAAAAACCCCATAG
AATCTATCTATATAAACATAAAGAGGCAATCGTGTCAGGAATCAAGTTTTTCTTTGGCCAAAAGGTACTTGGAACTTGGA
ACGAGCATGAAGAGATTAATGAGACTTCCGTAACACCCCAATAATCAAGGTACAGTAACCTCACCCAAATGTGCAATGTC
ATCAGGTTTTATTAAGCCAATTTGCCACTTGATGAAAATCCGAGTCAAATTCAAATTTCAAATAACAAGTCAAATTCTTA
TTTCTTCAAACTGTCAAATAAAAATGTTCAAGGATTTGCAAATATTCACCAAGTATTTAACATG
>chr5D_1
AAAGGTAGGGCATTTCCCATTGATATAGGAACTTTTGTACCAGAAACAATAGTATCTCCAATTATAGCCCCTCTGGGATG
TAAAATACATCTCTTCTCACCATCCCCATAGTGTATGAGACAAATGTATGCATTTCGATTAGGGTCGTATTCTATGGTTA
CGATTCTACCAGATATGTCTTTTTGATTCCGTCGAAAATCTATTTTACGGTATAGGCGCTTATGACCTCCCCCTCTATGC
CTTGCAGTAATGATTCCTCTGGAATTACGACCTTTACCACAACGGTGCCGTCCATGGATCAAATTATTTCGTGGATTGGA
TTTCACTTGCCTGTCTACGGTTCCCTTGCGTGTGCTCGGGATAGGTGTTTTGTATAAATGTTTTGCCGTATTATTAAGTA
TTCTCCTTTAGTTTTTTTCTCTATCTAGAAGTGGAATAGAATAACCCGGTTGAAGGGTAATGATCATACGTCTGTAATGC
ATTGTATGGCCCAGAATAGGTCCTATTCTTCTACCTTTTCCAGGTAGTCGATGGCTATTCACAGCTACCACCTTAACACC
AAAGAAGAGTTCAACCCAATGCTTTATTTCTGTCTTAGTGAATCCCGATTCGACATTAAAAGTATATTGATTCTTTCCCA
ATAAACGAAGACTTTTTTCTGTAAATACCGCGTATTTGATTCCATCCATAAATCGACTTTCCCTCCTATGCTCTGAGTTC
CAGTATCGATAAGAATTCGAGTTCTTATTGTTCTTATGTTATGGTATGAATATACCATACCAATTCGTTATGTATGGATG
ATGGATGAGATTCCATGGATAGAGAGCCAGTTCCAATAGACTTATGGAATGTTCCCGTTCGTGTGCATCCAGCAGGAATT
GAACCCGCAAATTTACCAATTATGAGTTGGGCGCTTTAACCATTCAGCCATGGATGCTTAACAGGGATCATCGTACATCG
TAAATAACCAATTTTCATATAGAAAGACATATCATAGAAAAATGAAATCGAAAATATTCCGAGATGGCAAATATTCGGAG
ATGACTATGAAAACACCTCTCTGGATCCTCGAATTGAAAGAGAGATTGAGAGGGATCAAGAATCTTAATTCTCGCTATTT
GGAATGGATCCAATTCTATTGAGTCTGACTCATAGTGATCATTTCTCTTTAGCAAAGAATGACCTTGGTTATCAAAGGAT
TGAACAACCGGGATCCATTTACTTATGATACCTAGTTGGCATTGATAACAAGGATCTAATGAATTATGAGTTTAATAGAT
CCTCTTTAGCAGAAAGACGTATATTCCTTGCTCATTATCAGACAATCACTTATTCCCAAACCTCGTGTGGGACTAATCGT
TTTCATTTACCATCTCATGGAAAACCCTTTTCGTTCCGCTTAGCCCTATCGGGTA-TTTTAGTGATAGGTTCTGTAGGAA
CTGGACGATCCTATTTGGTCAAATACCTAACGAAAAATTACGATTTTCCTTTCATTAAGGTACGAGGGCTTCTTATTCCA
CAAGAACGAAAGCACCTTTTCATTCTTTCATATGCTAGGGGTTTTTACTTGGAAAAGACAATGTTCCATACTAAAGGATT
CGGGTCCATAACCACGAGTTCCAGTGCACTAGATCTTGTAGCACTTAGCAACGAAGCCCTATCCATTAGTATTCCACATA
AGAAATCCATTCTAGAAAAAAATACAATTAGATTAGCTCTTCATAGACAAACTTGGGGTTTGCGAGCCAAGGTAAGATCG
GCTCGGGATCATGGGACCCTTTTCTATCAGATAGGAGGGGCTCTTGTACAAAATAGACTTACTAAGTAATAACCCCATAG
AATCTATCTATATAAAGATAAAGAGGCAATCGTGTCAGGAAGCGGGTTTTTCTTTGGCCAAAAGGTACTTCGAACTTGGA
ACGAGCATGAAGAGATTAACGAGACTTC----------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------
>chr5D_1
AAAGGTAGGGCATTTCCCATTGATATAGGAACTTTTGTACCAGAAACAATAGTATCTCCAATTATAGCCCCTCTAGGATG
TAAAATACATCTCTTCTCACCATCCCCATAGTGTATGAGACAAATGTATGCATTTCGATTAGGGTCGTATTCTATGGTTA
CGATTCTACCAGATATGTCTTTTTGATTCCGTCGAAAATCTATTTTACGGTATAGGCGCTTATGACCTCCCCCTCTATGC
CTTGAGGTAATGATTCCTCTGGAATTACGACCTTTACCACAACGGTGCCGTCCATGGATCAAATTATTTCGTGGATTGGA
TTTCACTTGCCTGTCTACGGTTCCCTTGCGTGTGCTCGGGATAGGTGTTTTGTATAAATGTTTCGCCGTATTATTAAGTA
TTCTCCTTTAGTTTTTTTCTCTATCTAGAAGTGGAATAGAATAACCCGGTTGAAGGGTAATGATCATACGTCTGTAATGC
ATTGTATGGTCCAGAATAGGTCCTATTCTTCTACCTTTTCCAGGTAGCCGATGGCTATTCACAGCTACCACCTTAACACC
AAAGAAGAGTTCGACCCAATGCTTTATTTCTGTCTTAGTGAATCCCGATTCGACATTAAAAGTATATTGATTCTTTCCCA
ATAAACGAAGACTTTTTTCTGTAAATACTGCGTATTTGATTCCATCCATAAATCGACTTTCCCTCCTATGCTCTGAGTTC
CAGTATCGATAAGAATTCGAGTTCTTATTGTTCTTATGTTATGGTATGAATATACCATACCAATTCGTTATGTATGGATG
ATGGATGAGATTCCATGGATAGAGAGCCAGTTCCAATAGACTTATGGAATGTTCCCGTTCGTGTGCATCCAGCAGGAATT
GAACCCGCAAATTTACCAATTATGAGTTGGGCGCTTTAACCATTCAGCCATGGATGCTTAACGGGGATCATCGTACATCG
TAAATAATCAATTTTCATATAGAAAGACATATCATAGAAAAATGAAATCGAAAATATTCCAAGATGGCAAATATTCGGAG
ATGACTATGAAAACACCTCTCTGGATCCTCGAATTGAAATAGAGATTGAGAGGGATCAAGAATCCTAATTCTCGCTATTT
GGAATGGATCCAATTCTATTGAGTCTGACTCATAGTGATCATTTCTCTTTAGCAAAGAATGACCTTGGTTATCAAAGGAT
TGAACAACCGGGATCCATTTACTTATGATACCTAGTTGGCATTGATAACAAGGGTCTAATGAATTATGAGTTTAATAGAT
CCTCTTTAGCAGAAAGACGTATATTCCTTGCTCATTATCAGACAATCACTTATTCCCAAACCTCGTGTGGGACTAATCAT
TTTCATTTACCATCTCATGGAAAACCCTTTTCGTTCCGCTTAGCCCTATCGGGTA-TTTTAGTGATAGGTTCTGTAGGAA
CTGGACGATCCTATTTGGTCAAATACCTAACGAAAAATTACGATTTTCCTTTCATTAAGGTACGAGGGCTTCTTATTCCA
CAAGAACGAAAGCACCTTTTCATTCTTTCATATACTAGGGGTTTTTACTTGGAAAAGACAATGTTCCATACTAAAGGATT
CGGGTCCATAACCACGAGTTCCAGTGCACTAGATCTTGTAGCACTTAGCAACGAAGCCCTATCCATTAGTATTCCACATA
AGAAATCCATTCTAGAAAAAAATACAATTAGATTAGCTCTTCATAGACAAACTTGGGGTTTGCGAGCCAAGGTAAGATCG
GCTCGGGATCATGGGACCCTTTTCTATCAGATAGGAGGGGCTCTTGTACAAAATAGACTTACTAAGTAATAACCCCATAG
AATCTATCTATATAAAGATAAAGAGGCAATCGTGTTAGGAAGCGGGTTTTTCTTTGGCCAAAAGGTACTTCAAACTTGGA
ACGAGCATGAAGAGATTAACGAGACTTC----------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------
>chr5D_1
AAAGGTAGGGCATTTCCCATTGATATAGGAACTTTTGTACCAGAAACAATAGTATCTCCAATTATAGCCCCTCTGGGATG
TAAAATATATCTCTTCTCACCATCCCCATAGTGTATGAGACAAATGTATGCATTTCGATTAGGGTCGTATTCTATGGTTA
CGATTCTACCAGATATGTCTTTTTGATTCCGTCAAAAATCTATTTTACGGTATAGGCGCTTATGACCTCCCCCTCTATGC
CTTGCGGTAATGATTCCTCTGGAATTACGACCTTTACCACAACGGTGCCGTCCATGGATCAAATTATTTCGTGGATTGGA
TTTCACTTGCCTGTCTACGGTTCCCTTGTGTGTGCTCGGGATAGGTGTTTTGTATAAATGTTTCGCCGTATTATTAAGTA
TTCTCCTTTAGTTTTTTTCTCTATCTAGAAGTGGAATAGAATAACCCGGTTGAAGGGTAATGATCATACGTCTGTAATGC
ATTGTATGGCCCAGAATAGGTCCTATTCTTCTACCATTTCCAGGTAGTCGATGGCTATTCACAGCTACCACCTTAACACC
AAAGAAGAGTTCGACCCAATGCTTTATTTCTGTCTTAGTGAATCCCGATTCGACATTAAAAGTATATTGATTCTATCCCA
ATAAACGAAGACTTTTTTCTGTAAATACTGCGTATTGGATTCCATCCATAAATCGACTTTCCCTCCTATGCTCTGAGTTC
CAGTATCGATAAGAATTCGAGTTCTTATTGTTCTTATGTTATGGTATGAATATACCATACCAATTCGTTATGTATGGATG
ATGGATGAGATTCCATGGATAGAGAGCCAGTTCCAATAGACTTATGGAATGTTCCCGTTCGTGTGCATCCAGCAGGAATT
GAACCCGCAAATTTACCAATTATGAGTTGAGCGCTTTAACCATTCAGCCATGGATGCTTATCAGGGATCATCGTACATCG
TAAATAACCAATTTTCATATAGAAAGACATATCATAGAAAAATGAAATCGAAAATATTCCGAGATGGCAAATATTCAGAG
ATGACTATGAAAACACCTCTCTGGATCCTCGAATTGAAAGAGAGATTGAGCGGGATCAAGAATCCTAATTCTCGCTATTT
GGAATGGATCCAATTCTATTGAGTCTGACTCATAGTGATCGTTTCTCTTTAGCAAAGAATGACCTTGGTTATCAAAGGAT
TGAACAACCGGGATCCATTTACTTATGATACCTAGTTGGCATTGATAACAAGGATCTAATGAATTATGAGTTTAATAGAT
CCTCTTTAGCAGAAAGACGTATATTCCTTGCTCATTATCAGACAATCACTTATTCCCAAACCTCATGTGGGACTAATCAT
TTTCATTTACCATCTCATGGAAAACCCTTTTTGTTCCGCTTAGCCCTATCGGGTA-TTTAAGTGATAGGTTCTGTAGGAA
CTGGACGATCCTATTTGGTCAAATACCTAACGAAAAATTACGATTTTCCTTTCATTAAGGTACGAGGGCTTCTTATTCCA
CAAGAACGAAAGCACCTTTTCATTCTTTCATATACTAGGGGTTTTTACTTGGAAAAGACAATGTTCCATACTAAAGGATT
CGGGTCCATAACCACGAGTTCCAGTGCACTAGATCTTGTAGCACTTAGCAACAAAGCCCTATCCATTAGTATTCCACATA
AGAAATCCATTCTAGAAAAAACTACAATTAGATTAGCTCTTCATAGACAAACTTGGGGTTTGCGAGCCAAGGTATGATCG
GCTCGGGATCATGGGACCCTTTTCTATCAGATAGGAGGGGCTCTTGTACAAAATAGACTTACTAAGTAATAACCCCATAG
AATCTATCTATATAAAGATAAAGAGGCAATCATGTCAGGAAGCGGGTTTTTCTTTGGCCAAAAGGTACTTCGAACTTGGA
ACGAGCATGAAGAGATTAACGAGACTTC----------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------
>chr1A_1
AAAGGTAGGGCATTTCCCATTGATATAGGAACTTTTGTACCAGAAACAATAGTATCTCCAATTATAGCCCCTCTGGGATG
TAAAATATATCTCTTCTCACCATCCCCATAGTGTATGAGACAAATGTATGCATTTCGATTAGGGTCGTATTCTATGGTTA
CGATTCTACTAGATATGTCTTTTTGATTCCGTCGAAAATCTATTTTACGGTATAGGCGCTTATGACCTCCCCCTCTATGC
CTTGCGGTAATGATTCCTCTGGAATTACGACCTTTACCACAACGGTGCCGTCCATGGATCAAATTATTTTGTGGATTGGA
TTTCACTTGCCTGTCTACGGTTCCCTTGCGTGTGCTCGGGATAGGTGTTTTGTATAAATGTTTCGCCGTATTATTAAGTA
TTCTCCTTTAGTTTTTTTCTCTATCTAGAAGTGGAATAGAATAACCCGGTTGAAGGGTAATGATCATACGTCTGTAATGC
ATTGTATGGCCCAGAATAGGTCCTATTCTTCTACCTTTTCCAGGTAGTCGATGGTTATTCACAACTACCACCTTAACACC
AAACAAGAGTTCGACCCAATGCTTTATTTCTGTCTTAGTGAATCCCGATTCGACATTAAAAGTATATTGATTCTTTCCCA
ATAAACGAAGACTTTTTTCTGTAAATACTGCGTATTTGATTCCATCCATAAATCGACTTTCCCTCCTATGCTCTGAGTTC
CAGTATCGATAAGAATTCGAGTTCTTATTGTTCTTATGTTATGGTATGAATATACCATACCAATTCGTTATGTATGGATG
ATGGATGAGATTCCATGGATAGAGAGCCAGTTCCAATAGACTTATGGAATGTTCCCGTTCGTGTGCATCCAGCAGGAATT
GAACCCGCAAATTTACCAATTATGAGTTGGGCGCTTTAACCATTCAGCCATGGATGCTTAACAGGGATCATCGTACATCG
TAAATAACCAATTTTCATATAGAAAGACATATCATAGAAAAATGAAATCGAAAATATTCCGAGATGGCAAATATTCGGAG
ATGACTATGAAAACACCTCTCTGGATCCTCGAATTGAAAGAGAGATTGAGAGGGATCAAGAATCCTAATTCTCGCTATTT
GGAATGGATCCAATTCTATTGAGTCTGACTCATAGTGATCATTTCTCTGTAGCAAAGAATGACCTTGGTTATCAAAGGAT
TGAACAACCGGGATCCATTTACTTATGATACCTAGTTGGCATTGATAACAAGGATCTAATGAATTATGAGTTTAATAGAT
CCTCTTTAGCAGAAAGACGTATATTCCTTGCTCATTATCAGACAATCACTTATTCCCAAACCTCGTGTGGGACTAATCGT
TTTCATTTACCATCTCATGGAAAACCCTTTTCGTTCCGCTTAGCCCTATCGGGTA-TTTTAGTGATAGGTTCTGTAGGAA
CTGGACGATCCTATTTGGTCAAATACCTAACGAAAAATTACGATTTTCCTTTCATTAAGGTACGAGGGCTTCTTATTCCA
CAAGAACGAAAGCACCTTTTCATTCTTTCATATACTAGGGGTTTTTCCTTGGAAAAGACAATGTTCCATACTAAAGGATT
CGGGTCCATAACCACGAGTTCCAGTGCACTAGATCTTGTAGCACTTAGCAACGAAGCCCTATCCATTAGTATTCCACATA
AGAAATCCATTCTAGAAAAAAATACAATTAGATTAGCTCTTCATAGACAAACTTGGGGTTTGCGAGCCAAGGTAAGATCG
GCTCGGGATCATGGGACCCTTTTCTATCAGATAGGAGGGGCTCTTGTACAAAATAGACTTACTAAGTAATAACCCCATAG
AATCTATCTATATAAAGATAAAGAGGCAATCGTGTCAGGAAGCGGGTTTTTCTTTGGCCAAAAGGTACTTCGAACTTGGA
ACGAGCATGAAGAGATTAACGAGACTTC----------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------
>chr3B_1
AAAGGTAGGGCATTTCCCATTGATATAGGAACTTTTGTACCAGAAACAATAGTATCTCCAATTATAGCCCCTCTGGGATG
TAAAATATATCTCTTCTCACCATCCCCATAGTGTATGAGACAAATGTATGCATTTCGATTAGGGTCGTATTCTATGGTTA
CGATTCTACCAGATATGTCTTTTTGATTCCGTCGAAAATCTATTTTACGGTATAGGCGCTTATGACCTCCCCCTCTATGC
CTTGCGGTAATGATTCCTCTGGAATTACGACCTTTACCACAACGGTGCCGTCCATGGATCAAATTATTTCGTGGATTGGA
TTTCACTTGCCTGTCTACGGTTCCCTTGCGTGTGCTCGGGATAGGTGTTTTGTATAAATCTTTCGCCGTATTATTAAGTA
TTCTCCTTTAGTTTTTTTCTCTATCTAGAAGTGGAATAGAATAACCCGGTTGAAGGGTAATGATCATACGTCTGTAATGC
ATTGTATGGCCCAGAATAGGTCCTATTCTTCTACCTTTTCCAGGTAGTCGATGGCTATTCACAGCTACCACCTTAACACC
AAAGAAGAGTTCGACCCAATGCTTTATTTCTGTCTTAGTGAATCCCGATTCGACATTAAAAGTATATTGATTCTTTCCCA
ATAAACGAAGACTTTTTTCTGTAAATACTGCGTATTTGATTCCATCCATAAATCGACTTTCCCTCCTATGCTCTGAGTTC
CAGTATCGATAAGAATTCGAGTTCTTATTGTTCTTATGTTATGGTATGAATATACCATACCAATTCGTTATGTATGGATG
ATGGATGAGATTCCATGGATAGAGAGCCAGTTCCAATAGATTTATGGAATGTTCCCGTTTGTGTGCATCCAGCAGGAATT
GAACCCGCAAATTTACCAATTATGAGTTGGGCGCTTTAACCATTCAGCCATGGATGCTTAACAGGGATCATCGTACATCG
TAAATAACCAATTTTCATATAGAAAGACATATCATAGAAAAATGAAATCGAAAATATTCCGAGATGGCAAATATTCGGAG
ATGACTATGAAAACACCTCTCTGGATCCTCGAATTGAAAGAGAGATTGAGAGGGATCAAGAATCCTAATTCTCGCTATTT
GGAATGGATCCAATTCTATTGAGTCTGACTCATAGTGATCATTTCTCTTTAGCAAAGAATGACCTTGGTTATCAAAGGAT
TGAACGACCGGGATCCATTTACTTATGATACCTAGTTGGCATTGATAACAAGGATCTAATGAATTATGAGTTTAATAGAT
CCTCTTTAGCAGAAAGACGTATATTCCTTGCTCATTATCAGACAATCACTTATTCCCAAACCTTGTGTGGGACTAATCGT
TTTCATTTACCATCTCATGGAAAACCCTTTTCGTTCCGCTTAGCCCTATCGGGTA-TTTTAGTGTTAGGTTCTGTAGGAA
CTGGACGATCCTATTTGGTCAAATACCTAACGAAAAATTGCGATTTTCCTTTCATTAAGGTACGAGGGCTTCTTATTCCA
CAAGAACGAAAGCACCTTTTCATTCTTTCATATACTAGGGGTTTTTACTTGGAAAAGACAATGTTCGATACTAAACGATT
CGGGTCCATAACCACGAGTTCCAGTGCACTAGATCTTGTAGCACTTAGCAACGAAGCCCTATCCATTAGTATTCCACATA
AGAAATCCATTCTAGAAAAAAATACAATTAGATTAGCTCTTCATAGACAAACTTGGGGTTTGCGAGCCAAGGTAAGATCG
GCTCGGGATCATGGGACCCTTTTCTATCAGATAGGAGGGGCTCTTGTACAAAATAGACTTACTAAGTAATAACCCCATAG
AATCTATCTATATAAAGATAAAGAGGCAATCGTGTCAGGAAGCGGGTTTTTCTTTGGCCAAAAGGTACTTCGAACTTGGA
ACGAGCATGAAGAGATTAACGAGAATTC----------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------
>chr3D_1
AAAGGTA--GCATTTCCCATTGATATAGGAACTTTTGTACCAGAAACAATAGTATCTCCAATTATAGCCCCTCTGGGATG
TAAAATATATCTCTTCTCACCATCCCCATAGTGTATGAGACAAATGTATGCATTTCGATTAGGGTCGTATTCTATGGTTA
CGATTCTACCAGATATGTCTTTTTGATTCCGTCGAAAATCTATTTTACGGTATAGGCGCTTATGACCTCCCCCTCTATGC
CTTGCGGTAATGATTCCTCTGGAATTACGACCTTTACCACAACGGTGCCGTCCATGGACCAAATTATTTCGTGGATTGGA
TTTCACTTGCCTGTCTACGGTTCCCTTGCGTGTGCTCGGGATAGGTGTTTTGTATAAATGTTTCGCCGTATTATTAAGTA
TTCTCCTTTAGTTTTTTTCTCTATCTAGAAGTGGAATAGAATAACCCGGTTGAAGGGTAATGATCATACGTCTGTAATGC
ATTGTATGGCCCAGAATAGGTCCTATTCTTCTACCTTTTCCAGGTAGTCGATGGCTATTCACAGCTACCACCTTAACACC
AAAGAAGAGTTTGACCCAATGCTTTATTTCTGTCTTAGTGAATCCCGATTCGACATTAAAAGTATATTGATTCTTTCCCA
ATAAACGAAGACTTTTTTCTGTAA-TACTGCGTATTTGATTCCATCCATAAATCGACTTCCCCTCCCATGCTCTGAGTTC
CAGTATCGATAAGAATTCGAGTTCTTATTGTTCTTATGTTATGGTATGAATATACCATACCAATTCGTTATGTATGGATG
ATGGATGAGATTCCATGGATAGAGAGCCAGTTCCAATAGACTTATGGAATGTTCCCGTTCGTGTGCATCCAGCAGGAATT
GAACCCGCAAATTTACCAATTATGAGTTGGGTGCTTTAACCATTCAGCCATGGATGCTTAACAGGGATCATCGTACATCG
TAAATAACCAATTTTCATATAGAAAGACATATCATAGAAAAATGAAATCGAAAATATTCCGAGATGGCAAATATTCGGAG
ATGACTATGAAAACACCTCTCTGGATCCTCGAATTGAAAGAGAGATTGAGAGGGATCAAGAATCCTAATTCTCGCTATTT
GGAATGGATCCAATTCTATTGAGTCTGAATCATAGTGATCATTTCTCTTTAGCAAAGAATGACCTTGGTTATCAAAGGAT
TGAACAACCGGGATCCATTTACTTATGATACCTAGTTGGCATTGATAACAAGGATCTAATGAATTATGAGTTTAATAGAT
CCTCTTTAGCAGAAAGACATATATTCCTTGCTCATTATCAGACAATCACTTATTCCCAAACCTCGTGTGGGACTAATCGT
TTTCATTTACCATCTCATGGAAAACCCTTTTCGTTCCGCTTAGCCCTATCGGGTA-TTTTAGTGATAGGTTCTGTAGGAA
CTGGACGATCCTATTTGGTCAAATACCTAACGAAAAATTACGATTTTCCTTTCATTAAGGTATGAGGGCTTCTTATTCCA
CAAGAACGAAAGCACCTTTTCATTCTTTCATATACTAGGGGTTTTTACTTGGAAAAGACAATGTTCCATACTAAAGGATT
CGGGTCCATAACCACGAGTCCCAGTGCACTAGATCTTGTAGCACTTAGCAACGAAGCCCTATCCATTAGTATTCCACATA
AGAAATCCATTCTAGAAAAAAATACAATTAGATTAGCTCTTCATAGACAAACTTGGGGTTTGCGAGCCAAGGTAAGATCG
GCTCGGGATCATGGGACCCTTTTCTATCAGATAGGAGGGGCTCTTGTACAAAATAGACTTACTAAGTAATAACCCCATAG
AATCTATCTATATAAAGATAAAGAGGCAATCGTGTCAGGAAGCGGGTTTTTCTTTGGCCAAAAGGTACTTCGAACTTGGA
ACGAGCATGAAGAGATTAACAAGACTTC----------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------
>chr6D_1
AAAGGTAGGGCATTTCCCATTGATATAGGAACTTTTGTACCAGAAACAATAGTATCTCCAATTATAGCCCCTTTGGGATG
TAAAATATATCTCTTCTCACCATCCCCATAGTGTATGAGACAAATGTATGCATTTTGATTAGGGTCGTATTCTATGGTTA
CGATTCTACCAGATATGTCTTTTTGATTCCGTCGAAAATCTATTTTACGGTATAGGCGCTTATGACCTCCCCCTCTATGC
CTTGCGGTAATGATTCCTCTGGAATTACGACCTTTACCACAACGGTGCCGTCCATGGATCAAATTATTTCGTGGATTGGA
TTTCACTTGCCTGTCTACGGTTCCCTTGCGTGTGCTCGGGATAGGTGTTTTGTATAAATGTTTCGCCGTATTATTAAGTA
TTCTCCTTTAGTTTTTTTCTCTATCTAGAAGTGCAATAGAATAACCCGGTTGAAGGGTAATGATCATACGTCTGTAATGC
ATTGTATGGCCCAGAATAGGTCCTATTCTTCTACCTTTTCCAGGTAGTCGATGGCTATTCAGAGCTACCACCTTAACACC
AAAGAAGAGTTCGACCCAATGCTTTATTTCTGTCTTAGTGAATCCCGATTCGACATTAAAAGTATATTGATTCTTTCCCA
ATAAACGAAGACTTTTTTCTGTAAATACTGCGTATTGGATTCCATCCATAAATCGACTTTCCCTCCTATGCTCTGAGTTC
CAGTATCAATAAGAATTCGAGTTCTTATTGTTCTTATGTTATGGTATGAATATACCATACCAATTCGTTATGTATGGATG
ATGGATGAGATTCCATGGATAGAGAGCCAGTTCCAATAGACTTATGGAATGTTCCCGTTCGTGTGCATCCAGCAGGAATT
GAACCCGCAAATTTACCAATTATGAGTTGGGCGCTTTAACCATTCAGCTATGGATGCTTAACAGGGATCATCGTACATCG
TAAATAACCAATTTTCATATAGAAAGACATATCATAGAAAAATGAAATCGAAAATATTCCGAGATGGCAAATATTCGGAG
ATGACTATGAAAACACCTCTCTGGATCCTCGAATTGAAAGAGAGATTGAGAGGGATCAAGAATCCTAATTCTCGCTATTT
GGAATGGATCCAATTCTATTGAGTTTGACTCATAGTGATCATTTCTATTTAGCAAAGAATGACCTTGGTTATCAAAGGAT
TGAACAACCGGGATCCATTTACTTATGATACCTAGTTGGCATTGATAACAAGGATCTAATGAATTATGAGTTTAATAGAT
CCTCTTTAGCAGAAAGATGTATATTCCTTGCTCATTATCAGACAATCACTTATTCCCAAACCTCATGTGGAACTAATCGT
TTTCATTTACCATCTCATGGAAAACCCTTTTCGTTCCGCTTAGCCCTATCGGGTA-TTTTAGTGATAGGTTCTGTAGGAA
CTGGACGATCCTATTTGGTCAAATACCTAACGAAAAATTACGATTTTCCTTTCATTAAGGTACGAGGGATTCTTATTCCA
CAAGAACGAAAGCACCTTTTCATTCTTTCATATACTAGGGGTTTTTACTTGGAAAAGACAATGTTCCATACTAAAGGATT
CGGGTCCATAACCACGAGTTCCAGTGCACTAGATCTTGTAGCACTTAGCAACGAAGCCCTATCCATTAGTATTCCACATA
AGAAATCCATTCTAGAAAAAAATACAATTAGATTAGCTCTTCATAGACAAACTTGGGGTTTCCGAGCCAAGGTAAGATCG
GCTCTGGATCATGGGACCCTTTTCTATCAGATAGGAGGGGCTCTTGTACAAAATAGACTTACTAAGTAATAACCCCATAG
AATCTATCTATATAAACATAAAGAGGCAATCGTGTCAGGAAGCGGGTTTTTCTTTGGCCAAAAGGTACTTCGAACTTGGA
ACGAGCATGAAGAGATTAACGAGACTTC----------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------
>chr3A_1
AAAGGTAGGGCATTTCCCATTGATATAGGAACTTTTGTACCAGAAACAATAGTATCTCCAATTATAGCCCCTCTGGGATG
TAAAATATATCTCTTCTCACCATCCCCATAGTGTATGAGACAAATGTATGCATTTCGATTAGGGTCGTATTCTATGGTTA
CGATTCTACCAGATATGTCTTTTTGATTCCGTCGAAAATCTATTTTACGGTATAGGCGCTTATGACCTCCCCCTCTATGC
CTTGCGGTAATGATTCCTCTGGAATTACGACCTTTACCACAATGGTGCCGTCCATGGATCAAATTATTTCGTGGATTGGA
TTTCACTTGCCTGTCTACGGTTCCCTTGCGTGTGCTCGGGATAGGTGTTTTGTATAAATGTTTCGCCGTATTATTAAGTA
TTCTCCTTTAGTTTTT-TCTCTATCTAGAAGTGGAATAGAATAACCCGGTTGAAGGGTAATGATCATACGTCTGTAATGC
ATTGTATGGCCCAGAATAGGTCCTATTCTTCTACCTTTTCTAGGTAGTCGATGGCTATTCACAGCTACCACCTTAACACC
AAAGAAGAGTTCGACCCAATGCTTTATTTCTGTCTTAGTGAATCCCGATTCGACATTAAAAGTATATTGATTCTTTCCCA
ATAAACGAAGACTTTTTTCTGTAAATACTGCGTATTTGATTCCATCCATAAATCGACTTTCCCTCCTATGCTCTGAGTTC
CAGTATAGATAAGAATTCGAGTTCTTATTGTTCTTATGTTATGGTATGAATATACCATACCAATTCGTTATGTATGGATG
ATGGATGAGATTCCATGGATAGAGAGCCGGTTCCAATAGACTTATGGAATGTTCCCATTCGTGTGCATCCAGCAGGAATT
GAACCCGCAAATTTACCAATTATGAGTTGGGCGTTTTAACCATTCAGCCATGGATGCTTAACAGGGATCATCGTACATCG
TAAATAACCAATTTTCATATAGAAAGACATATCATAGAAAAATGAAATCGAAAATATTCCGAGATGGCAAATATTCGGAG
ATGACTATGAAAACACCTCTCTGGATCCTTGAATTGAAAGAGAGATTGAGAGGGATCCAGAATCCTAATTCTCGCTATTT
GGAATGGATCCAATTATATTGAGTCTGACTCATAGTGATCATTTCTCTTTAGCAAAGAATGACCTTGGTTATCAAAGGAT
TGAACAACCGGGATCCATTTACTTATGATACCTAGTTGGCATTGATAACGAGGATCTAATGAATTATGAGGTTAATAGAT
CCTCTTTAGCAGAAAGACGTATATTCCTTGCTCATTATCAGACAATCACTTATTCCCAAACCTCGTGTGGGACTAATCGT
TTTCATTTACCATCTCATGGAAAACCCTTTTCGTTCCGCTTAGCCCTATCGGGTA-TTT-AGTGATAGGTTCTGTAGGAA
CTGGACGATCCTATTTGGTCAAATACCTAACGAAAAATTATGATTTTCCTTTCATTAAGGTACGAGGGCTTCTTATTCCA
CAAGAACGAAAGCACCTTTTCATTCTTTCATATACTAGGGGTTTTTACTTGGAAAAGACAATGTTCCATACTAAAGGATT
CGGGTCCATAACCACGAGTTCCAGTGCACTAGATCTTGTAGCACTTAGCAACGAAGCCCTATCCATTAGTATTCCACATA
AGAAATCCATTCTAGAAAAAAATACAATTAGATTAGATCTTCATAGACAAACTTGGGGTTTGCGAGCCAAGGTAAGATTG
GCTCGGGATCATGGGACCCTTTTCTATCAGATAGGAGGGGCTCTTGTACAAAATAGACTTACTAAGTAATAACCCCATAG
AATCTATCTATATAAAGATAAAGAGGCAATCGTGTCAGGAAGCGGGTTTTTCTTTGGCCAAAAGGTACTTCGAACTTGGA
ACGAGCATGAAGAGATTAACGAGACTTC----------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------
>chrUn_1
AAAGGTAGGGCATTTCCCATTGATATAGGAACTTTTGTACCAGAAACAATAGTATCTCCAATTATAGCCCCTCTGGGATG
TAAAATATATCTCTTCTCACCATCCCCATAGTGTATGAGACAAATGTATGCATTTCGATTAGGGTCGTATTCTATGGTTA
CGATTCTACCAGATATGTCTTTTTGATTCTGTCGAAAATCTATTTTACGGTATAGGCGCTTATGACCTCCCCCTCTATGC
CTTGCGGTAATGATTCCTCTAGAATTACGACCTTTACCACAACGGTGCCGTCCATGGATCAAATTATTTCGTGGATTGGA
TTTCACTTGCCTATCTACGGTTCCCTTGCGTGTGCTTGGGATAGGTGTTTTGTATAAATGTTTCGCCGTATTATTAAGTA
TTCTCCTTTAGTTTTT-TCTCTATCTAGAAGTGGAATAGAATAACCCGGTTGAAGGGTAATGATCATACATCTGTAATGC
ATTGTATGGCCCAGAAGAGGTCCTATTCTTCTACCTTTTCCAGGTAGTCGATGGCTATTCACAGCTACCACCTTAACACC
AAAGAAGAGTTCGACCCAATGCTTTATTTCTATCTTAGTGAATCCCGATTCGACATTAAAAGTATATTGATTCTTTCCCA
ATAAACGAAGACTTTTTTCTGTAAATACTGCATATTTGATTCCATCCATAAATCGACTTTCCCTCCTATGCTCTGAGTTC
CAGTATCGATAAGAATTTGAGTTCTTATTGTTCTTATGTTATGGTATGAATATACCATACCAATTCGTTATGTATGGACG
ATGGATGAGATTCCATGGATAGAGAGCCAGTTCCAATAGACTTATGGAATGTTCCCGTTCGTGTGCATCCAGCAGGAATT
GAACCCGCAAATTTACCAATTATGAGTTGGGCGCTTTAACCATTCAGCCATGGATGCTTAACAGGGATCATCGTACATCG
TAAATAACCAATTTTCATATAGAAAGACATATCATAGAAAAATGAAATCGAAAATATTCCGAGATGGCAAATATTCGGAG
ATGACTATGAAAACACCTCTCTGGATCCTCGAATTGAATGAGAGATTGAGAGGGATCAAGAATCCTAATTCTCGCTATTT
GGAATGGATCCAATTCTATTGAGTCTGACTCATAGTGATCATTTCTCTTTAGCAAAGAATGACCTTGGTTATCAAAGGAT
TCAACAACGGGGATCCATTTACTTATGATACCTAGTTGGCATTGATAACAAGGATCTAATGAATTATGAGTTTAATAGAT
CCTCTTTAGCAGAAAGACGTATATTCCTTGATCATTAACAGACAATAACTTATTCCCAAACCTCGTGTGGGACTAATCGT
TTTCATTTACCATCTCATGGAAAACCCTTTTCGTTCCGCTTAGCCCTATCGGGTATTTT-AGTGATAGGTTATGTAGGAA
CTGGACGATCCTATTTGGTCAAATACCTAACAAAAAATTACGATTTTCCTTTCATTAAGGTACGAGGGCTTCTTATTCCA
CAAGAACGAAAGCACCTTTTCATTCTTTCATATACTAGGGGTTTTTACTTGGAAAAGACAATGTTCCATACTAAAGGATT
CGGGTCCATAACCACGAGTTCCAGTGCACTAGATCTTGTAGCACTTAGCAACGAAGCCCTATCCATTAGTATTCCACATA
AGAAATCCATTCTAGAACAAAATACAATTAGATTAGCTCTTCATAGACAAACTTGGGGTTTGCGAGCCAAGGTAAGATCG
GCTCGGGATCATGGGACCCTTTTCTATCAGATGGGAGGGGCTCTTGTACAAAATAGACTTACTAAGTAATAACCCCATAG
AATCTATCTATATAAAGATAAAGAGGCAATCGTGTCAGGAAGCGGGTTTTTCTTTGGCCAAAAGGTACTTCGAACTTGGA
ACGAGCATGAAGAGATTAACGAGACTTC----------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------
>SNPs
--------------------------------------------------------------------------------
------------S------------------------S------------------S-----------------------
S---------------------------------------------------------------------SS--------
----------------------------S-----------------S--S------------------------------
--------------------------------------------------------S-------S---------------
-----S-----------------------------------------------------------------S--------
--------------------------------------------------------------------------------
---------------------------------------------------S-----------------------S----
--------S------------------------------------------------------------S--S-------
S---------------------------------------------------S---------------------------
--------------------------------------------------------------------------------
-----S--------------------------------------------------------------------------
---S---------------------------S------------------------------------------------
----------------------------S--------------------S------------------------------
--------------------------------------------------------------------------------
--------------------S------------------------S----------------------------------
--------------------------------------S---S-------------------------------------
-----------S-----------------------------------------------------------S--------
--------------------------------------------------------------------------------
------------S---------------------------------------------------------------S---
---S-----------------------------------------------S-S--------------------------
-------------------------------------S-----------------------------------------S
---------------------------------------------------------------------S----------
-----------------------------------------S-SS-------------------------S---------
-------------------S--------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_232
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------TAGGCGCTTATGACCTCCGA--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------
>reverse_1978
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------ACCTCACCCAAATGTGCAATG--
--------------------------------------------------------------------------------
----------------------------------------------------------------
