>input_sequence_87396
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------------------------ATGGCGGGGGGCTCGGCGGCGACCGGCGCGGACGAGCAGGCTCTGGCGCAGGGGTC
GCGGAGGGTCGTTGACCGGGAGGCCGTCGACCGGGGCGTCGCCTACGCGCTCATGGTCGTCGCTCTCGTCGCCACGTATG
CGCTTCACTAG---------------------------------------------------------------------
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>chr6B_1_TraesCS6B01G205600
GGAGGAGTCAGTGAAAGGGGGAGAGAGGAGGAGGAGGAAAA-GGGGAAGAAGAAAAGAAAAAAAAGGTGAAAAGAGATGG
GAGGCCGACAGGTGGGTCCATCTTCCACCTCAGCATATTGTCCATGTAGGCATGCCAAATCAGCGTGACATGTGGGGCCA
ACCTGTCAGTTTTGCTGTTAGACGCGGCTTAATTTTGAATCGGCGTGATTTGTTACTCACTTGATGCAGAAGTGGTGGTT
TTTTGAAACTTTTGGAAAAGATGATAGTTTAGGAGTACCCTAGTCACAAATGTGGTGGTTTTCAGCAATTTACTCGCAAA
TCCTTCTCTAGCCCTGTTTGTTCGATTTATGAATTTCACTCAGAATCAAAGTTCTACTTAATCTGGTTGAAAACTCAAAT
GCACGTCTCGGCTATTTCCTATCGAATGAGTTTCCGCTAACTTGATCAACTCATGACCATCAAATGGACGCCCTGGTTGT
CGTCGTCGCAACAACACGGAAATTGGAAAATGAATGGTGATATAGAGGCATTGTTTGCCTCGACACGGTGCCAGCGTGAA
GACCCGGCGAAGCTGGGTTTCTCTTCGATGAAAAGCAGAGTTTGAC---------CCATG-TTGACAAAACATAGCTTGC
TTTTCCTGCGGACAAAACCTGCTACGCCAGCCATCTATATTCCGGACGCTTGACCAGGTCAGGTTATAGCTCCGCTCAAA
CAAATAGAAATGGGGTACTACCGT--------------------------------------CGGCTAGATCAAGAGCCG
GCACCGCCGAAGCGACAGGCAAAAAGGCAAGCCCCGATCAAACGAGGCGGCTACCGTCTGAAGTCTACCTGGCGTCGCCT
CGCGCACCCGGCTCCCTCTGC--------------GCGCGCGCGCACACCATGGCATCAACCCATCTCTA-GCTGCCGAA
CTTGTCGCCTAGAAGTAGAATACTGTGGCTAGTGCGACCTCTCTCCCAAAGCAAGCTCTAGGATCGGCTTTCTGTCTTCC
GGCTCGGTACATTGTTCGATCGGGATGGCGGGGGGCTCGGCGGCGACCGGCGCGGACGAGCAGGCTCTGGCGCAGGGGTC
GCGGAGGGTCGTTGACCGGGAGGCCGTCGACCGGGGCGTCGCCTACGCGCTCATGGTCGTCGCTCTCGTCGCCACGTATG
CGCTTCACTAGCCTGCTACATCGGCTCCCATACATACATACCATGGGCGGCCGGAGACGGAGAGGAAGGATTTTGTTCCG
ATCGAG----------------------------TGCGTTTCAAGTGGCCGCACTT-TATGTGTGATGTTCTTTCTTTTT
AAACTTCGACGTGTAGTGAGAGTTGAGAGAGGAGGGGAGAAAATAT-----AGATGATCATGTATATTTTATTTTATTTG
CAATAAAACCC-TGACCTTAATATCAGATGGGACCAGTGACGGAGCCAAAAA-AAATTTATCACGGG-------------
---------TGGGAAGGGACAAAACCTAGAAAAATGAGT-----------------------------ACTATTCATAAG
CAAATTAACATGAAATCCTTGTTGTTAAGGGGCCAGGCCCTGGCGA--------------------GGCCAGGGCGAAAG
CTAGACTCAAACGCCCTTAACATAAACACACACAAAATGAACTGAATATTTTAAATTGTCAGCTAAATAAAATATACTA-
TTTTTCTCTATATATTATATTTTTTACAAATATGTTCGAGAGCACAGAAGTAAAGTGTGTTAGTATTTAGTTGTTTGTTG
TGCAAAGCATTGTTGTAAAAACAAATACCTCATCAAGACTAACAAATGATTTAAATACTCATAGCCACACTCATGTTGTT
ATCATCCATGTTGATATCAACATTAGTGGCCAGGGCGCGCCTCCTATGCGTTTCTGTGCGTACCAATCTAGCTTTTGTAC
TTGTGAAAGTGCATGTTTGATTCAGAGGAGCACAGTTGTTAAAATATGAATGCTGTTCAGACGACATGCGGATAATTGGA
AGCTAAGATGAAAAAAAATAGAGGGTGTATCCATACAACCAAACAGTTAAAAAAGCAGCAGATTTGATTCATCATTATAA
ATTGGTGATCGAGATTTATCAGGATAACACGATTAATTCAGCACCTAAATACGACAATATGCTTGACCGAGATACAACGA
CAGTAAACATACATGGTGTATGTTTTCGAAATAACCGTGTCACCTCTATCATCTCTATGAGAAAACATAGTGTCGGCGT
>chr6D_1
GGAGGAGTCAGTGAGAGGGGGAGAGAGGAGGAGAAGGAAAAGGGGGAAGAAGAAAAGAAAAAAAAAGTGAAATGAGATGG
GAGGCCGACAGGTGGGTCCATCTTCCACCTCAACATATTGTATATGTAGGCATGCCAAATCAGCCTGGCATGTGGGGCCA
ACTTGTCAGTTTTGCTGTTAGATGCGGCTTAATTTTGAATCGGCGTGATTTGTTACTCACTTGATGCAAAAGTGGTGGTT
TTTTGAAACTTTTGGCAAAAGTGGTAGTTTAGGAGTACCCTAGTCATAAATGTGATGGCTTTGAGCAATTTACTCGCAAA
TCCTTCTCTAGCCCTGTTTGTTCGATTTATGAATTTCACTTAGAACCAAAGTTCTGCTTAATCTGGTTGAAAACTCAAAT
GCACGTCTCAGCTATTTCCCATCGAATGAGTTTCCGCTGACTTGATCAACTCATGTCCAGCAAATGCACGCCCTGGTTCT
CATCGCGGCAACAACATGGAAATTGAAAAATGAATGGTGGTACAGAGGCATTGTTTGCCTCGACACGGTGCCAGCGTGAA
GACCCGGCGAAGCTGGGTTTCTCTTCGATGAAAAGCAGAGTTTGAC---------CCACGATTGACAAAACATAGCTTGC
TTTTCCTGCGGAC------------GCCAGCCATATATATTTGGGACGCTTGACCAGGTCAGATTATAGCTCCGCTCAAA
GAAATAGAAATGGGGTAGGTTATTCCCTGCATCTGGGTCCAGCGAACGGCTGCCGTCCCGGCCGGCCAGATCAAGAGCCG
GCACCGGCGAAGCGACAGGCAAAAAGGCAAGCCCCGATCAAACGAGGCGGCTACCGTCTGAAGTCTACCTGGCGTCGCCT
CGCGCACCCAGCTCCCTCTGCGCGTATATATCTCTGCGCGCGCGCACACCATGGCATCAACCCATCTCTAAGCTGCCGAA
CTTGTCACCTAGAAGTAGAATACTGTCGCTAGTGCGAGCTCTCT-CCAAAGCAAGATCTAGGATCGGCTTTCTGTCGTCC
GGCTCGGTGCATTGTTCGATCGGGATGGCGGGGGGCTCGGCGGCGACCGGCGCGGACGAGAAGGCTCTGGCGCAGGGATG
GCGGAGGGTCGTGGACCGGGAGGCCGTCGACCGGGGCGTCGCCTACGCGCTCATGGTCGTCGCTCTCGTCGCCACGTATG
CGCTTCACTAGCCTGCTACATCGGCTCCCAAACATACATACCATGGGCGGCCGGAGACGGAGAGGAAGGATTTTGTTCCG
ATCGAG----------------------------TGCGTTTCAAGTGGCCGCACTTCTATGTGTGATGTTCTTTCTTTTT
AAACTTCGACGTCTAGTGAGAGTTGAGAGAGGAGGGGAGAAAATAT-----AGATGATCATGTATATTTTATTTTATTTG
CAATAAACCCCCTGACCTTAGTATCAGATGGGACCAGTGGCGGAGCCAAAAAAAAATTTATCACGGG-------------
---------TGGGAAGAGACAAAACCTAGAAAAATGAGT-----------------------------------------
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>chr6A_420
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--------------------ATCGAATGAGTTTCCGCTGACTTGATCAACTCATGACCATCAAATGGACGCTCTGGTTCT
CATCGCGGCAACAACACGGAAATTGGAAAATGATGGTGACAG-AGAGGCATTGTTTGCCTCGACACGGTGCCAGCGTGAA
GACCCAGCGAAGCTGGGTTTCTCTTCGATGAAAAGCAGAGTTTGACCCATTTGACCCACGATTGACAAAACATAGCTTGC
TTTTCCTGCGGACAAAACCTTCTACGCCAGCCATATATATTCCGGACGCTTGACCAGGTCAGGTTATAGCTCCGCTCAAA
CAATAGAAAT--GGGTAGGTTATTCCCTGCATCTGGGTCCAGCGAACGGCTGCCGTCCCGGCCGGCCAGATCAAGAGCCG
GCACCGCCGAAGCGACACGCAAAAAGGCAAGCCCCGATCAAACGAGGCGGCTATCGTCTGAAGTCTACTTGGCGTCGCCT
CGCGCACCCAGCTCCCTCTGCGCGTATATATCTCTGCGCGCGCACACACCAGGGCATCAACCCATCTCTA-GCTGCCGAA
CTTGTTACCTAG--------------------TGTGAGCTCTCT-CCCAAGCAAGCTCTAGGATCGGCTTTCTGTCGTCC
GGCTCGGTGCATTGTTCGATCGGGATGGCGGCGGGCTCGGCGGCGACCGGCGCGGACGAGAAGGCTCTGGCGCAGGGGTG
GCGGAGGGTCGTTGACCGGGAGGCCGTCGACCGGGGCGTCGCCTACGCGCTCATGGTCGTCGCTCTCGTCGCCACGTATG
CGCTTCACTAGCCTGCTACATCGGCTCCCATACATGAATACCATGGGCGGCCGGAGACGGAGAGGAAGGATTTTGTTCCG
ATCGAGTTTGGTCGCTTTCCACGGCGCGAGTCTCTGCGTTTCAAGTGGCCGCACTTCTATGTGTGATGTTCTTTCTTTTT
AAACTTCGACGTGTAGTGAGAGTTGAGAGAGGAGGGGAGAAAATGATATACAGATGATCATGTATATTTTATTTTATTTG
CAATAAAACCCCTGACCTTAGTATCAGATGGGACCAGTGGCGGGGCC-AAAAAAAATTTATCACGGGGCTGAGTGATGCT
AAAACAGATTGGGAAGAGCCAAAACCTAAAAAAATGAGTTTTTAGCTGCAAATGACCGGTAATTATGTACTATTCATAAG
TAAATTAGCATGAAATCCTTGTTGTTAAAGGGGCCGCATGGCCAAGGCCGGTCCTGAGATTTCGAGGGCCAGGGCAAAAG
CTAGACTCAAACGCCCTTAACATAAACATAAAAAAAATGAACGAAATATGTTGAATTGTCAGCTAAATAAAATACACTAT
TTTTTCTCTATACAATATATTCTTTACAAATATGTTCCAGAGCACAGAAGTAAAGTGTATTAGTATTTAGTTGT------
-GCCAAGCATTGTAGTAAAAACAAATACCTCATCAAGACTAACAAATGATTTAAATACTCATAATCATACTCATGTTGTT
ATCATCCATGTTGATGTCAACA----------------------------------------------------------
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>SNPs
--------------S------------------S-------------------------------S------S-------
--------------------------------S--------SS---------------------S--S------------
--S-------------------S---------------------------------------------S-----------
---------------S---SS--S----------------------S-------S---S---S-----------------
----------------------------------------S----S---------S------------------------
---------S---------S------------------S---------------------------------------S-
-S---SS--------------------------------S--S-------------------------------------
----------------------------------------------------------S---------------------
--------------------S-------------S---------------------------------------------
-----------------SSSSSS-------------------------------------------S-------------
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---------S----------------------------------------------------------------------
------S-------------------S----------S------S-------------------------------S---
--------S---------------------------------------------------S------------------S
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--------------------S------------------S----------------------------------------
----------------S---------------------------------------------------------------
S------S--------------------S---S-S-SSSSSSSSSS-----------------------------S----
----------------------------S-S-S---------SS-----S--S---------------------S-----
------------S-S------S---------------S--------------------S---------------SSSSSS
S--S---------S-------------------------------------------------SS--S------------
---------------S------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_145
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---------------------------------------------GTAGGCATGCCAAATCAGCG---------------
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>reverse_1962
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-----------------------------------------TCCTATGCGTTTCTGTGCGT-------------------
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