>input_sequence_87287
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-----------------------------------------------------------ATGACCCGTATAGGGATTACT
AAGGGGACTAAAGAAACAAGAACAACAACGACTAATTCATCCGCCAATATATTCCCGAAAAGTCGAAAGCTAAGTGACAA
TGGTTTTGTGAAATCTTCTAGGATGTTAATTGGTAAAAGGATTGGAGTTGGTTTAATATATTTCTCGAAATAG-------
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>chr5B_1_TraesCS5B01G052800
ATTGATATAATTGGAATTGCGGAAGCAAATACCAATTTACT--AAAAAAAGAAAAAAGTATCTAATCGAAATTAAAAGAA
-TTTTTTTTTAAGATTAAACAAAAGGGTTCGCAAATAAAAGCGCTAGTGCCACAACTAGTCCATAAATTGTTAAAGCTTC
CATAAAAGCTAGACTAAGCAATAAAGTACCTCGTATTTTACCTTCTGCTTCTGGCTGTCTCGCAATACCTTCTACAGCTT
GTCCTGCAGCAGTACCTTGACCAACTCCAGGTCCAATAGAAGCAAGCCCTACGGCCAATCCAGCAGCAATAACAGAAGCA
GCAGCAATTAGTGGATTCATGGTGAGTAGTTCCTCGTGTCAAAAAAAAGAAATGGTTAAGGATACAATCAACCAATAAAT
TCTTACTTCTAAGCTCTATTGGGGAGAAGTAAAGTAACTAAAAAGTACAAATTGAAATCAAATTGAAATGATAATGTGAA
TTGTCCGAACTACATAGAAGGGAATTCCATATCCATATATCGGATTAGATAATGAATCTAACCTAGGAATATATAATATA
ATATCC------------TATATATACATTTGTTTCTTCTATTTTGTTTGCATATTTTCTCATTTTCTATTGAATCGGAT
TCTAAAATCATTGCTTAAAGTGGAAACCCGCATAAAAGAGGACTCCACTTATAGACATTAAGGATATTATAGTATAGATC
TAGCCTGACTCCACCCTCCTTAATGCATATATACTTTGAAAATTCCATAATATAGTCTAT--TCTATTCTCTCTCCTACA
ACTCTAGGCTATATATTCATACACATTTCTAACTATTTTTTTGCAACCAAGCAGATTATCCGGAACCATGCATGAATTGA
GCTAAGCTGCAAAAAAAAAA--TACTATTTCCAAAAATAGTCAATTCAATGATGACCCTCCATGGATTCACCTATATAGG
CTGCGGCTAATGTTGCAAAAATAAGAGCTTGAATACCGCTTGTAAATAATCCAAGAAACATGACCCGTATAGGGATTACT
AAGGGGACTAAAGAAACAAGAACAACAACGACTAATTCATCCGCCAATATATTCCCGAAAAGTCGAAAGCTAAGTGACAA
TGGTTTTGTGAAATCTTCTAGGATGTTAATTGGTAAAAGGATTGGAGTTGGTTTAATATATTTCTCGAAATAGCTCAATC
CTTTTTTGCTAAGACCAGCATAAAAATATGCCGCTGACGTGAGTAAAGCTAAAGCAACAGTAGTATTTATATCATTCGTG
GGCGCTGCTAATTCCCCATGGGGTAACTCTATAATTTTCCAAGGTAAAAGAGCACCCGACCAATTCGAAACAAAAATAAA
AAGGAACATAGTTCCAATAAAGAGAACCCACGGACCATATTCTTCTCC-ATCTGAGTTTTGCTCAAGTCTCGAATAAACT
CAAGGACATATTCAAAAAAATTCTGACCGTCGGTCGGGATGGTTTGTGGATTCCGAACAGCTATGACAACTGAACCTAGC
AAGATAGTAATTACGACCCAAGAAGTGATGAGTACTTGGGCATGAATTTGGAAACCTCCTATTTGCCAATAGCACCGGAA
CGC-AGGGGAAGCCGGCGGCATGTGCCAGTGTTCAGGGCGATCGGGTGCAGTATTATAGCGGTGTCACGGGGAGGAGCGC
CCATAGTCAAGCCCCGGGGATGTAGCCATATCGGTGAACCTCGTTAACAAATCTCGGTGTCGTGATCCTGTGATTGCTTG
GTCCTTGGATGATCGACGGTATGCCTCGGATTTATTCTAACAAGTGGTATCATGAGCTAGGT----------TATTTAAA
GATTGATCTAGAGGAAGGAAGAAAGCGTCGACGGAAGTCTGCAGGAAGCAATCGTAATACGGGAT--AAGTCATCGGCGA
GTTACGATGCAAAGCAGATGTATTGGTCGAGTCGTAATCTTCATGGAAGCAATCGGAAGCGGTCTCGGCGTGATAATGTG
CAGCAGGCTGGCGGTCGTATGGCACGCGGGAACACGGCAAATCGATTCGATGCGGGCTCCTGTGGC-------CTTTGGA
TCGAGGCCGACCGGGCGGCTGTTGCATGCAAGGCGGCAGTCAGCAGATCAGATCGAATCTGACCGGAAGCGACCTGGCGG
CAGCTGGCATACCCCGCGTTTGGAGGCCCCAGCAAGGAGCTGGCGTCGTGCGGA
>chr3B_1
ATTGATATAATTGGAATTGCGGAAGCAAATACCAATTTACT--AAAAAAAGAAAAAAGTATCTAATCGAAATCGAAAGAA
-TTTTTTTTTAAGATTAAACAAAAGGGTTCGCAAATAAAAGCGCTAGTGCCACAACTAGTCCATAAATTGTTAAAGCTTC
CATAAAAGCTAGACTAAGCAATAAAGTACCTCGTATTTTACCTTCTGCTTCTGGCTGTCTCGCAATACCTTCTACAGCTT
GTCCTGCAGCAGTACCTTGACCAACTCCAGGTCCAATAGAAGAAAGCCCTACGGCCAATCCAGCAGCAATAACAGAAGCA
GCAGCAATTAGTGGATTCATGGTGAGTAGTTCCTCGTGTCAAAAAAAAGAAATGGTTAAGGATACAATCAACCAATAAAT
TCTTACTTCTAAGCTCTATTGGGGAGAAGTAAAGTAACTAAAAAGTACAAATTGAAATCAAATTGAAATGATAATGTGAA
TTGTCCGAACTACATAGAAGGGAATTCCATATCCATATATCGGATTAGATAATGAATCTAACCTAGGAATATATAATATA
ATATCC------------TATATATACATTTGTTTCTTCTATTTTGTTTGCATATTTTCTCATTTTCTATTGAATCGGAT
TCTAAAATCATTGCTTAAAGTGGAAACCCGCATAAAAGAGGACTCCACTTATAGACATTAAGGATATTATAGTATAGATC
TAGCCTGACTCCACCCTCCTTAATGCATATATACTTTGAAAATTCCATAATATAGTCTAT--TCTATTCTCTCTCCTACA
ACTCTAGGCTATATATTCATACGCATTTCTAACTATTTTTTTGCAACCAAGCAGATTATCCGGAACCATGCATGAATTGA
GCTAAGCTGCAAAAAAAAA---TACTATTTCCAAAAATAGTCAATTCAATGATGACCCTCCATGGATTCACCTATATAGG
CTGCGGCTAATGTTGCAAAAATAAGAGCTTGAATACCGCTTGTAAATAATCCAAGAAACATGACCGGTATAGGGATTACT
AAGGGGACTAAAGAAACAAGAACAACAACGACTAATTCATCCGCCAATATATTCCCGAAAAGTCGAAAGCTAAGTGATAA
TGGTTTTGTGAAATCTTCTAGGATGTTAATTGGTAAAAGGATTGGAGTTGGTTTAATATATTTCTCGAAATAGCTCAATC
CTTTTTTGCTAAGACCAGCATAAAAATATGCCGCTGACGTGAGTAAAGCTAAAGCAACAGTAGTATTTATATCATTCGTG
GGCGCTGCTAATTCCCCATGGGGTAACTCTATAAATTTCCAAGGTAAAAGAGCACCCGACCAATTCGAAACAAAAATAAA
AAGGAACATAGTTCCAATAAAGGGAACCCAGGGACCATATTCTTCTCCAATCTGAGTTTTGCTCAAGTCTCGAATAAACT
CAAGGACATATTCAAAAAAATTCTGACCGTCGGTCGGGATGGTTTGTGGATTCCGAACAGCTATGACAACTGAACCTAGC
AAGATAGTAATTACGACCCAAGAAGTGATGAGTACTTGGGCATGAATTTGGAAACCTCCTATTTGCCAATAG--------
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>chr3A_1
ATTGATATAATTGGAATTGCGGAAGCAAATACCAATTTACT--AAAAAAAGAAAAAAGTATCTAATCGAAATCGAAAGAA
-TTTTTTTTTAAGATTAAACAAAAGGGTTCGCAAATAAAAGCGCTAGTGCCACAACTAGTCCATAAATTGTTAAAGCTTC
CATAAAAGCTAGACTAAGCAATAAAGTACCTCGTATTTTACCTTCTGCTTCTGGCTGTCTCGCAATACCTTCTACAGCTT
GTCCTGCAGCAGTACCTTGACCAACTCCAGGTCCAATAGAAGCAATCCCTACGGCCAATCCAGCAGCAATAACAGAAGCA
GCAGCAATTAGTGGATTCATGGTGAGTAGTTCCTCGTGTCAAAAAAAAGAAATGGTTAAGGATACAATCAACCAATAAAT
TCTTACTTCTAAGCTCTATTGGGGAGAAGTAAAGTAACTAAAAAGTACAAATTGAAATCAAATTGAAATGATAATGTGAA
TTGTCCGAACTACATAGAAGGGAATTCCATATCCATATATCGGATTAGATAATGAATCTAACCTAGGAATATATAATATA
ATATCC------------TATATAAACATTTGTTTCTTCTATTTTGTTTGCATATTTTCTCATTTTCTATTGAATCGGAT
TCTAAAATCATTGCTTAAAGTGGAAACCCGCATAAAAGAGGACTCCACTTATAGACATTAAGGATATTATAGTATAGATC
TAGCCTGACTCCACCCTCCTTAATGCATATATACTTTGAAAATTCCATAATATAGTCTAT--TCTATTCTCTCTCCTACA
ACTCTAGGCTATATATTCATACGCATTTCTAACTATTTTTTTGCAACCAAGCAGATTATCCGGAACCATGCATGAATTGA
GCTAAGCTGCAAAAAAAAAAAATACTATTTCCAAAAATAGTCAATTCAATGATGACCCTCCATGGATTCACCTATATAGG
CTGCGGCTAATGTTGCAAAAATAAGAGCTTGAATACCGCTTGTAAATAATCCAAGAAACATGGCCGGTATAGGGATTACT
AAGGGGACTAAAGAAACAAGAACAACAACGACTAATTCATCCGCCAATATATTCCCGAAAAGTCGAAAGCTAAGTGATAA
TGGTTTTGTGAAATCTTCTAGGATGTTAATTGGTAAAAGGATTGGAGTTGGTTTAATATATTTCTCGAAATAGCTCAATC
CTTTTTTGCTAAGACCAGCATAAAAATATGCCGCTGACGTGAGTAAAGCTAAAGCAACAGTAGTATTTATATCATTCGTG
GGCGCTGCTAATTCCCCATGGGGTAACTCTATAATTTTCCAAGGTAAAAGAGCACCCGACCAATTCGAAACAAAAATAAA
AAGGAACATAGTTCCAATAAAGGGAACCCAGGGACCATATTCTTCTCCAATCTGAGTTTTGCTCAAGTCTCGAATAAACT
CAAGGACATATTCAAAAAAATTCTGACCGTCGGTCGGGATGGTTTGTGGATTCCGAACAGCTATGACAACTGAACCTAGC
AAGATAGTAATTACGACCCAAGAAGTGATGAGTACTTGGGCATGAATTTGGAAACCTCCTATTTGCCAATAG--------
--------------------------------------------------------------------------------
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------------------------------------------------------
>chr7B_1
ATTGATATAATTGGAATTGCGGAAGCAAATACCAATTTACT--AAAAAAAGAAAAAAGTATCTAATCGAAATCGAAAGAA
-TT-TTTTTTAAGATTAAACAAAAGGGTTCACAAATAAAAGCGCTAGTGCCACAACTAGTCCATAAATTGTTAAAGCTTC
CATAAAAGCTAGACTAAGCAATAAAGTACCTCGTATTTTACCTTCTGCTTCTGGCTGTCTCACAATACCTTCTACAGCTT
GTCCTGCAGCAGTACCTTGACCAACTCCAGGTCCAATAGAAGCAAGCCCTACGGCCAATCCAGCAGCAATAACAGAAGCA
GCAGCAATTAGTGGATTCATGGTGAGTAGTTCCTCGTGTCAAAAAAAAGAAATGGTTAAGGATACAATCAACCAATAAAT
TCTTACTTCTAAGCTCTATTGGGGAGAAGTAAAGTAACTAAAAAGTACAAATTGAAATCAAATTGAAATGATAATGTGAA
TTGTCCGAACTACATAGAAGGGAATTCCATATCCATATATCGGATTAGATAATGAATCTAACCTAGGAATATATATTATA
ATATCC------------TATATATACATTTGTTTCTTCTATTTTGTTTGCATATTTTCTCATTTTCTATTGAATTGGAT
TCTAAAATCATTGCTTAAAGTGGAAACCCGCATAAAAGAGGACTCCACTTATAGACATTAAGGATATTATAGTATAGATC
TAGCCTGACTCCACCCTCCTTAATGCATATATACTTTGAAAATTCCATAATATTGTCTAT--TCTATTCTCTCTCCTACA
ACTCTAGGCTATATATTCATACGCATTTCTAACTATTTTTTTGCAACCAAGCAGATTATCCGGAACCATGCATGAATTGA
GCTAAGCTGCAAAAAA-----ATACTATTTCCAAAAATAGTCAATTCAATGATGACCGTCCATGGATTCACCTATATAGG
CTGCGGCTAATGTTGCAAAAATAAGAGCTTGAATACCGCTTGTAAATAATCCAAGAAACATGACCGGTATAGGGATTACT
AAGGGGACTAAAGAAACAAGAACAACAACGACTAATTCATCCGCCAATATATTCCCGAAAAGTCGAAAGCTAAGTGACAA
TGGTTTTGTGAAATCTTCTAGGATGTTAATTGGTAAAAGGATTGGAGTTGGTTTAATATATTTCTCGAAATAGCTCAATC
CTTTTTTGCTAAGACCAGCATAAAAATATGCCGCTGACGTGAGTAAAGCTAAAGCAACAGTAGCATTTATATCATTCGTG
GGCGCTGCTAATTCCCCATGGGGTAACTCTATAATTTTCCAAGGTAAAAGAGCACCCGACCAATTCGAAACAAAAATAAA
AAGGAACATAGTTCCAATAAAGGGAACCCAGGGACCATATTCTTCTCCAATCTAAGTTTTGCTCAAGTCTCGAATAAACT
CAAGGACATATTCAAAAAAATTCTGACCGTCGGTCGGGATGGTTTGTGGATTCCGAACAGCTATGACAACTGAACCTAGC
AAGATAGTAATTACGACCCAAGAAGTGATGAGTACTTGGGCATGAATCTGGAAACCTCCTATTTGCCAATAG--------
--------------------------------------------------------------------------------
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------------------------------------------------------
>chr1B_1
ATTGATATAATTGGAATTGCGGAAGCAAATACCAATTTACT--AAAAAAAGAAAAAAGTATCTAATCGAAATCGAAAGAA
-TT-TTTTTTAAGATTAAACAAAAGGGTTCGCAAATAAAAGCGCTAGTGCCACAACTAGTCCATAAATTGTTAAAGCTTC
CATAAAAGCTAGACTAAGCAATAAAGTACCTCGTATTTTACCTTCTGCTTCTGGCTCTCTCGCAATACCTTCTACAGCTT
GTCCTGCAGCAGTACCTTGACCAACTCCAGGTCCAATAGAAGCAAGCCCTACGGCCAATCCAGCAGCAATAACAGAAGCA
TCAGCAATTAGTGGATTCATGGTGAGTAGTTCCTCGTGTCAAAAAAAAGAAATGGTTAAGGATACAATCAACCAATAAAT
TCTTACTTCTAAGCTCTATTGGGGAGAAGTAAAGTAACTAAAAAGTACAAATTGAAATCAAATTGAAATGATAATGTGAA
TTGTCTGAACTACATAGAAGGGAATTCCATATCCATATATCGGATTAGATAATGAAACTAACCTAGGAATATATAATATA
ATATCC------------TATATATACATTTGTTTCTTCTATTTTGTTTGCATATTTTCTCATTTTCTATTGAATCGGAT
TCTAAAATCATTGCTTAAAGTGGAAACCCGCATAAAAAAGGACTCCACTTATAGACATTAAGGATATTATAGTATAGATC
TAGCCTGACTCCACCCTCCTTAATGCATATATACTTTGAAAATTCCATAATATAGTCTAT--TCTATTCTCTCTCCTACA
ACTCTAGGCTATATATTCATACGCATTTCTAACTATTTTTTTGCAACCAAGCAGATTATCCGGAACCATGCATGAATTGA
GCTAAGCTGCAAAAAAAA----TACTATTTCCAAAAATAGTCAATTCAATGATGACCCTCCATGGATTCACCTATATAGG
CTGCGACTAATGTTGCAAAAATAAGAGCTTGAATACCGCTTGTAAATAATCCAAGAAACATGACCGGTATAGGGATTACT
AAGGGGACTAAAGAAACAAGAACAACAACGACTAATTCATCCGCCAATATATTCCCAAAAAGTCGAAAGCTAAGTGATAA
TGGTTTTGTGAAATCTTCTAGGATGTTAATTGGTAAAAGGATTGGAGTTGGTTTAATATATTTCTCGAAATAGCTCAATC
CTTTTTGG-TAAGACCAGCATAAAAATATGCCACTGACGTGAGTAAAGCTAAAGCAACAGTAGTATTTATATCATTCGTG
GGCGCTGCTAATTCCCCATGGGGTAACTCTATAATTTTCCAAGGTAAAAGAGCACCCGACCAATTCGAAACAAAAATAAA
AAGGAACATAGTTCCAATAAAGGGAACCCAGAGACCATATTCTTCTCCAATCTGAGTTTTGCTCAAGTCTCGAATAAACT
CAAGGACATATTCAAAAAAATTCTGACCGTCGGTCGGGATGGTTTGTGGATTCCGAACAGCTATGACAACTGAACCTAGC
AAGATAGTAATTACGACCCAAGAAGTGATGAGTACTTGGGCATGAATTTGGAAACCTCCTATTTGCCAATAG--------
--------------------------------------------------------------------------------
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------------------------------------------------------
>chr5D_1
ATTGATATAATTGGAATTGTGGAAGCAAATACCAATTTACT--AAAAAAAGAAAAAAGTATCTAATCGAAATCGAAAGAA
-TT--TTTTTAAGATTAAACAAAAGGGTTCGCAAATAAAAGCGCTAGTGCCACAACTAGTCCATAAATTGTTAAAGCTTC
CATAAAAGCTAGACTAAGCAATAAAGTACCTCGTATTTTACCTTCTGCTTCTGGCTGTCTCGCAATACCTTCTACAGCTT
GTCCTGCAGTAGTACCTTGACCAACTCCAGGTCCAATAGAAGCAAGCCCTACGGCCAATCCAGCAGCAATAACAGAAGCA
GCAGCAATTAGTGGATTCATGGTGAGTAGTTCCTCGTGTCAAAAAAAAGAAATGGTTAAGGATACAATCAACCAATAAAT
TCTTACTTCTAAGCTCTATTGGGGAGAAGTAAAGTAACTAAAAAGTACAAATTGAAATCAAATTGAAATGATAATGTGAA
TTGTCCGAACTACATAGAAGGGAATTCCATATCCATATATCGGATTAGATAATGAATCTAACCTAGGAATATATAATATA
ATATCCTAT--ATATATATATATATACATTTGTTTCTTCTATTTTGTTTGCATATTTTCTCATTTTCTATTGAATCGGAT
TCTAAAATCATTGCTTAAGGTGGAAACCTGCATAAAAGAGGACTCCACTTATAGACATTAAGGATATTATAGTATAGATC
TAGCCTGACTCCACCCTCCTTAATGCATATATACTTTGAAAATTCCATAATATAGTCTAT--TCTATTCTCTCTCCTACA
ACTCTAGGCTATATATTCATACGCATTTCTAACTATTTTTTTGCAACCAAGCAGATTATCTGGAACCATGCATGAATTGA
GCTAAGCTGCAAAAAAAT----TACTATTTCCAAAAAGAGTCAATTCAATGATGACCCTCCATGGATTCACCTATATAGG
CTGCGGCTAATGTTGCAAAAATAAGAGCTTGAATACCGCTTGTAAATAATCCAAGAAACATGACCGGTATAGGGATTACT
AAGGGGACTAAAGAAACAAGAACAACAACGACTAATTCATCCGCCAATATATTCCCGAAAAGTCAAAAGCTAAGCGATAA
TGGTTTTGTGAAATCTTCTAGGATGTTAATTGGTAAAAGGATTGGAGTTGGTTTAATATATTTCTCGAAATAGCTCAATC
CTTTTTTGCTAAGACCAGCATAAAAATATGCCACTGACGTGAGTAAAGCTAAAGCAACAGTAGTATTTATATCATTCGTG
GGCGCTGCTAATTCCCCATGGGGTAACTCTATAATTTTCCAAGGTAAAAGAGCACCCGACCAATTCGAAACAAAAATAAA
AAGGAACATAGTTCCAATAAAGGGAACCCAGGGACCATATTCTTCTCCAATCTGAGTTTTGCTCAAGTCTCGAATAAACT
CAAGGACATATTCAAAAAAATTCTGACCATCGGTCGGGATGGTTTGTGGATTCCGAACAGCTATGACAACTGAACCTAGC
AAGATAGTAATTACGACCCAAGAAGTGATGAGTACTTGGGCATGAATTTGGAAACCTCCTATTTGCCAATAG--------
--------------------------------------------------------------------------------
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------------------------------------------------------
>chr5D_1
ATTGATATAATTGGAATTGCGGAAGCAAATACCAATTTACTAAAAAAGAAAAAAAAAGTATCTAATCGAAATCGAAAGAA
--T--TTTTTAAGATTAAACAAAAGGGTTCGCAAATAAAAGCGCTAGTGCCACAACTAGTCCATAAATTGTTAAAGCTTC
CATAAAAGCTAGACTAAGAAATAAAGTACCTCGTATTTTACCTTCTGCTTCTGGCTGTCTCGCAATACCTTCTACAGCTT
GTCCTGCAGCAGTACCTTGACCAACTCCAGGTCCAATAGAAGCAAGCCCTACGGCCAATCCAGCAGCAATAACAGAAGCA
GCAGCAATTAGTGCATTCATGGTGAGTAGTTCCTCGTGTCAAAAAAAAGAAATGGTTAAGGATACAATCAACCAATAAAT
TCTTACTTCTAAGCTCTATTGGGGAGAAGTAAAGTAACTAAAAAGTACAAATTGAAATCAAATTGAAATGATAATGTGAA
TTGTCCGAACTACATACAAGGGAATTCCATATCCATATATCGGATTAGATAATGAATCTAGCCCAGGAATATATAATATA
ATATCCT----------ATATATATACATTTGTTTCTTCTATTTTGTTTGCATATTTTCTCATTTTCTATTGAATCGGAT
TCTAAAATCATTGCTTATAGTGGAAACCTGCATAAAAGAGGACTCCAATTATAGACATTAAGGATATTATAGTATAGATC
TAGCCTGACTCCACCCTCCTTAATGCATATATACTTTGAAAATTCCATAATATAGTCTAT--TCTATTCTCTCTCCTACA
ACTCTAGGCTATATATTCATACGCATTTCTAACTATTTTTTTGCAACCAAGCAGATTATCTGGAACCATGCATGTATTGA
GCTAAGCTGCAAAAAAAA----TACTATTTCCAAAAAGAGTCAATTCAATGATGACCCTCCATGGATTCACCTATATAGG
CTGCGGCTAATGTTGCAAAAATAAGAGCTTGAATACCGCTTGTAAATAATCCAAGAAACATGACCGGTATAGGGATTACT
AAGGGGACTAAAGAAACAAGAACAACAACGACTAATTCATCCGCCAATATATTCCCGAAAAGTCGAAAGCTAAGCGATAA
TGGTTTTGTGAAATCTTCTAGGATGTTAATTGGTAAAAGGATTGGAGTTGGTTTAATATATTTCTCGTAATAGCTCAATC
CTTTTTTGCTAAGACCAGCATAAAAATATGCCGCTGACGTGAGTAAAGCTAAAGCAACAGTAGTATTTATATCATTCGTG
GGCGCTGCTAATTCCCCATGGGGTAACTCTATAATTTTCCAAGGTAAAAGAGCACCCGACCAATTCAAAACAAAAATAAA
AAGGAACATAGTTCCAATAAAGGGAACCCAGGGACCATATTCTTCTCCAATCTGAGTTTTGCTCAAGTCTCGAATAAACT
CAAGGACATATTCAAAAAAATTCTGACCGTCGGTCGGGATGGTTTGTGGATTCCGAACAGCTATGACAACTGAACCTAGC
AAGATAGTAATTACGACCCAAGAAGTGATGAGTACTTGGGCATGAATTTGGAAACCTCCTATTTGCCAATAG--------
--------------------------------------------------------------------------------
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------------------------------------------------------
>chr5D_1
ATTGATATAATTGGAATTGCGGAAGCAAATACCAATTGACT--AAAAAAAGAAAAAAGTATCTAATCGAAATCGAAAGAA
-TT--TTTTTAAGATTAAACAAAAGGGTTCGCAAATAAAAGCGTTAGTGCCACAACTAGTCCATAAATTGTTAAAGCTTC
CATAAAAGCTAGACTAAGCAATAAAGTACCTCGTATTTTACCTTCTGCTT----CTGGCTCGCAATACCTTCTACAGCTT
GTCCTGCAGCAGTACCTTGACCAACTCCAGGTCCAATAGAAGCAAGCCCTACGGCCAATCCAGCAGCAATAACAGAAGCA
GCAGCAATTAGTGGATTCATGGTGAGTAGTTCCTCGTGTCAAAAAAAAGAAATGGTTAAGGATACAATCAACCAATAAAT
TCTTACTTCTAAGCTCTATTGGGGAGAATTAAAGTAACTAAAAAGTACAAATTGAAATCAAATTGAAATGATAATGTGAA
TTGTCCGAACTACATAGAAGGGAATTCCATATCCATATATCGGATTAGATAATGAATCTAACCAAGGAATATATAATATA
ATATCCTAT--A------TATATATACATTTGTTTCTTCTATTTTGTTTGCATATTTTCTCATTTTCTATTGAATCGGAT
TCTAAAATCATTGCTTAAAGTGGAAACCTGCATAAAAGAGGACTCCAATTATAGACATTAAGGATATTATAGTATAGATC
TAGCCTGACTCCACCCTCCTTATTGCATATATACTTTGAAAATTCCATAATATAGTC--TATTCTATTATCTCTCCTACA
ACTCTAGGCTATATATTCATACGCATTTCTAACTATTTTTTTGCAACCAAGCAGATTATCTGGAACCATGCATGAATTGA
GCTAAGCTGCAAAAAAAA----TACTATTTCCAAAAAGAGTCAATCCAATGATAACCCTCCATGGATTCACCTATATAGT
CTGCGGCTAATGTTGCAAAAATAAGAGCTTGAATACCGCTTGTAAATAATCCAAGAAACATGACCGGTATAGGGATTACT
AAGGGGACTAAAGAAACAAGAACAACAACGACTAATTCATCCGCCAATATATTCCCGAAAAGTCGAAAGCTAAGCGATAA
TGGTTTTGTGAAATCTTCTAGAATGTTAATTGGTAAAAGGATTGGAGTTGGGTTAATATATTTCTCGAAATAGCTCAATC
CTTTTTTGCTAAGATCAGCATAAAAATATGCCGCTGATGTGAGTAAAGCTAAAGCAACAGTAGTATTTATATCATTCGTG
GGCGCTGCTAATTCCCCATGGGGTAACTCTATAATTTTCCAAGGTAAAAGAGCACCCGACCAATTCAAAACAAAAATAAA
AAGGAACATAGTTCCAATAAAGGGAACCCAGGGACCATATTCTTCTCCAATCTGAGTTTTGCTCAAGTCTCGAATAAACT
CAAGGACATATTCAAAAAAATTCTGACCGTCGGTCGGTATGGTTTGTGGATTCCGAACAGCTATGACAACTGAATCTAGC
AAGATAGTAATTACGACCCAAGAAGTGATGAGTACTTGGGCAAGAATTTGGAAACCTCCTATTTGCCAATAG--------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------------------
>chr1D_1
ATTGATATAATTGGAATTGCGGAAGCAAATACCAATTTACT--AAAAAAAGAAAAAAGTATCTAATCGAAAG-------A
TTT--TTTTTAAGATTAAACAAAAGGGTTCGCAAATAAAAGCGCTAGTGCCACAACTAGTCCATAAATTGTTAAAGCTTC
CATAAAAGCTAGACTAAGCAATAAAGTACCTCGTATTTTACCTTCTGCTTCTGGCTGTCTCGCAATACCTTCTACAGCTT
GTCCTGCAGCAGTACCTTGACCAACTCCAGGTCCAATAGAAGCAAGCCCTACGGCCAATCCAGCAGCAATAACAGAAGCA
GCAGCAATTAGTGGATTCATGGTGAGTAGTTCCTCGTGTCAAAAAAAAGAAATGGTTAAGGATACAATCAACTAATAAAT
TCTTACTGCTAAGCTCTATTGGGGAGAAGTAAAGTAACTAAAAAGTACAAATTGAAATCAAATTGAAATGATAATGTGAA
TTGTCCGAACTACATAGAAGGGAATTCCATATCCATATATCGGATTAGATAATGAATCTAACCTAGGAATATATAATATA
ATATCCTAT--A------TA--TATACATTTGTTTCTTCTTTTTTGTTTGCATATTTTCTCATTTTCTATTGAATCGGAT
TCTAAACTCATTGCTTAAAGTGGAAACCTGCATAAAAGAGGACTCCACTTATAGACATTAAGGATATTATAGTATAGATC
TAGCCTGACTCCACCCTCCTTAATGCATATATACTTTGAAAATTCCATAATATAGTC--T--TCTATTCTCTCTCCTACA
ACTCTAGGCTATATATTCATACGCATTTCTAACTATTTTT-TGCAACCAAGCAGATTATCTGGAACCATGCATGAATTGA
GCTAAGCTGCAAAAAAAA----TACTATTTCCAAAAAGAGTCAATTCAATGATGACCCTCCATGGATTCACCTATATAGG
CTGCGGCTAATGTTGCAAAAATAAGAGCTTGAATAATGCTTGTAAATAATCCAAGAAACATGACCGGTATAGGGATTACT
AAGGGGACTAAAGAAACAAGAACAACAACGACTAATTCATCCGCCAATATATTCCTGAAAAGTCGAAAGCTAAGCGATAA
TGGTTTTGTGAAATCTTCTAGGATGTTAATTGGTAAAAGGATTGGAGTTGGTTTAATATACTTCTCGAAATAGCTCAATC
CTTTTTTGCTAAGACCAGCATAAAAATATGCCGCTGACGTGAGTAAAGCTAAAGCAACAGTAGTATTTATATCATTCGTG
GGCGCTACTAATTCCCCATGGGGTAACTCTATAATTTTCCAAGGTAAAAGAGCACCCGAGCAATTCGAAACAAAAATAAA
AAGGAACATAGTTCCAATAAAGGGAACCCAGGGACCATATTCTTCTCCAATCTGAGTTTTGCTCAAGTCTCGAATAAACT
CAAGGACATATTCAAAAAAATTCTGACCGTCGGTCGGGATGGTTTGTGGATTCCGAACAGCTATGACAACTGAACCTAGC
AAGATAGTAATTACGACCCAAGAAGTGATGAGTACTTGGGCATGAATTTGGAAACCTCCTATTTGCCAATAG--------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>chr1D_1
ATTGATATAATTAGAATTGCGGAAGCAAATACCAATTTACT--AAAAAAAGAAAAAAGTATCTAATCAAAATCAAAAGAA
TTT--TTTTTAAGATTAAACAAAAGGGTTCGCAAATAAAAGCGCTAGTGCCATAACTAGTCCATAAATTGTTAAAGCTTC
CATAAAAGCTAGACTAAGCAATAAAGTACCTCGTATTTTACCTTCTGCTTCTGGCTGTCTCGCAATACCTTCTACAGCTT
GTCCTGCAGCAGTACCTTGACCAACTCCAGGTCCAATAGAAGCAAGCCCTACGGCCAATCTAGCAGCAATAACAGAAGCA
GCAGCAATTAGTGGATTCATGGTGAGTAGTTCCTTGTGTCA-AAAAAAGAAATGGTTAAGGATACAATCAACCAATAAAT
TCTTACTTCTAAGCTCTATTGGGGAGAAGTAAAGTAACTAAAAAGTAATAATTGAAATCAAATTGAAATGATAATGTGAA
TTGTCCGAACTACATAGAAAGGAATTCCATATCCATATATCGGATTAGATAATGAATCTAACCTAGGAATATATAATATA
ATATCCTATATA------TA--TATACATTTGTTTCTTCTATTTTGTTTGCATATTTTCTCATTTTCTATTGAATCGGAT
TCTAAAATCATTGCTTAAAGTGGAAACCTGCATAAAAGAGGACTCCACTTATAGACATTAAGGATATTATAGTATAGATC
TAGCCTGACTCCACCCTCCTTAATGCATATATACTTTGAAAATTCCATAATATAGTCTAT--TCTATTCTCTCTCCTACA
ACTCTAGGCTATATATTCATACGCATTTCTAACTATTTTT-TGCAACCAAGCAGATTATCTGGAACCATGCATGAATTGA
GCTAAGCTGCAAAAAAAT----TACTATTTCCAAAAAGAGTCAATTCAATGATGACCCTCCATGGATTCACCTATATAGG
GTGTGGCTAATGTTGCAAAAATAAGAGCTTGAATACCGCTTGTAAATAATCCAAGAAACATGACCGGTATAGGGATTACT
AAGGGGACTAAAGAAACAAGAACAACAACGACTAATTCATCTGCCAATATATTCCCGAAAAGTCGAAAGCTAAGCGATAA
TGGTTTTGTGAAATCTTCTAGGATGTTAATTGGTAAAAGGATTGGAGTTGGTTTAATATATTTCTCGAAATAGCTCAATC
CTTTTTTGCTAAGACCAGCATAAAAATATGCCGCTGACATGAGTAAAGATAAAGCAGCAGTAGTATTTATATC--TCGTG
GGTGCTGCTAATTCCCCATGGGGTAACTCTATAATTTTCCAAGGTAAAAGAGCACCTGACCAATTCGAAACAAAAATAAA
AAGGAACATAGTTCCAATAAAGGGAACCCAGGGACCATATTCTTCTCCAATCTGAGTTTTGCTCAAGTCTCGAATAAACT
CAAGGACATATTCAAAAAAATTCTGACCGTCGGTCGGGATGGTTTGTGGATTCCGAACAGCTATGACAACTGAACCTAGC
AAGATAGTAATTACGACCCAAGAAGTGATGAGTACTTGGGCATGAGTTTGGAAACCTCCTATTTGCCAATAG--------
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>chr3A_1568
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-------------------------------------------------------------------AATAGCACCGGAA
CGC-GGGGGAAGCCGGCGGCATGTGCCGGCATCCAGGGCGACCGGGTGCGGTATTGTAGCGGTGTCATGGGGAGGAGCGC
ACATAATCAGGCCCCGGGGATGTAGCCATATTGGTGAACCTCGTTAACAAATCTCGGTGTCGTGCTCGTGTGATTGCTTG
GTTCTCGGATGATCGACGGTATGCCTCGGATTTATTCTAACAAGTGGTATCATGAGCTAGGT----------TATTTAAA
GATCGATCTAAAGAAAGGAAGAAAGCATCGACGGAAGTCTGCATGAAGCAATCGTAATACGGGAT--AAGTCATCGGCGA
GTTACGATGCAAAGCAGATGTATTGGTCGAGTCGTAATCTTCATGGAAGCAATGGGAAGCGGTCTCGGCGTGATAACGTG
CAGCAGGCTAGCGGCGCT-TGGCACGCGGGTACATGGCAAATCGATTCTATGCGGGCTCCTGTGGC-------CTTCGGA
TCGAGGCCGACCGGGCGGCTGTTGCGTGC-AGGCGGCAGTCAGCAGATCAGATCGAATCTGACCGGAAGCGACCCGGCGG
TAGCTGGCATACCTCGCGTTTGGAGGCCCCAGCAAGGAGCTGGCGTCGTGCGGA
>chr3A_1568
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-------------------------------------------------------------------AATAGCACAGGTG
CGCAAGGGGGAGCCGCCGGTGTGTGCCGGCGCCCGGATGACCGGTGCGCGGTATTGTGACGGCGTCATGGGAAGGAGCGC
CCATAGTCAAGCCCCGGGATA-TAGCCATATCGGTGAACCTCGTTAACAAATCTCGGTGTTGTGCTCGTGTGATTGCTTG
GTTCTCGGATGATCGACGGCATGCCTCGGACTTATTCTAACAAGTGGTATCATGAGCTAGGT----------TATTTAAA
GATTGATCTAAAGGAAGGAAGAAAGCGTCGACGGAAGTCTGCAGGAAGCAATCGTAATACGGGAT--AAGTCATCGGCGA
GTTACTATGCAAAGCAGATGTATTAGTCGAGTCGTAATCTTCATGGAAGCAATCGGAAGCGGTCTCGGCGTGATAACGTG
CAGCAGGCTGGCGGCGCT-TGGCACGCGGGTACACAGCAAATCGATTCGATGCGGGCT-------C-------CTTCGGA
TCGAGGCCGACCGGGCGGCTGTCGCGTGC-AGGCGGCAGTCAGCAGATTCCAGCGAGG----------------------
-AGCTGGCATACCCCGCGTTTGGAGGCCCCAGCGAGGAGCTGGCGTCGTGCGGA
>chr1A_1568
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-------------------------------------------------------------------AATAGCACAGGCA
CGCAAGGGGGAGCCGGCTGCGTGTGCCGGTGCCCGGATGGCCGGTGTGCGGTATTGTGACGGTGTCACGGGGAGGAGCGC
TCGTAGTCAAGCCCCGGGGATGTAGCCATATCGGTGAACCTTGTTAACAAATCTCGGTGTCGTGCTCGTGTGATTGCTTG
GTCCTCGGATGATCGACGGAGTGCCTCGGATTTATTCTAACAAATGGTATCATGAGCTAGGTTGTTCGGAGGTATTTGAT
TGTTGATCTAGAGGAGGAAGAA---CATCGACACAAATCTGTCAGAAGCGATTCTAATACGGGACGAAATTCGTCGGCGA
GTTATGATCAGAAATAGATGTG---GTCGAGTTGAAATCTTTGTGAAGTAATCAT-AAGCGGTCTCGGCGTGATAATGTG
CAGCAGGCTGGCGGCGC-ATGGCACGCGGGTACACGGCAAATCGATTCGATGCGGGCT-------CCTGTGGCCTTCGGA
TCGAGGCCGACCGGGCGGCTGTTGCGTAC-AGGCAAG----AGCAGATCAGATCGAATCTGACAGGAAGCAACTCGGCGG
CAACTGGCATACCCCGCGTGCGGAGGCCCCAAC-AGGAGCTGGCGTCGTGCGGA
>SNPs
------------------------------------------------------------------------S-------
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----------------------S---------------------------------------------------------
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-----------------------------------------------------------------S--------------
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----------------------S-------S-------------------------------------------------
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---------------------------S----S--------S-------S-----S------------------------
----------------------------------------------------------------S--S------------
-----S--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------SSS-------------S---------------------------------------------S---
-------------------------S---S--------------------------------------------S-----
------------------------------------------------------
>forward_1026
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----------------------------------------TGTAAATAATCCAAGAAACATGACCC--------------
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>reverse_2031
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------------------------------AACACGGCAAATCGATTCGA------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
