>input_sequence_87280
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-----------------------------------------------------ATGTCCACCTTGTTCATTTTTATGTCT
TGGG-AGATTTGGAAAGAGCGCAACACGGGGGTCTTTCACAGCACCGTTGCTACGATGATGATGGTCGTCGCGAAGATCA
AAGAGGAAGCTCATCTTTGGGCTATAGCCGGTGCCACCCACTTGAATATTGTAATACCGCGAGAGTAG------------
--------------------------------------------------------------------------------
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----------------------------------
>chr1D_1_TraesCS1D01G418300
TATGATAAGTATCACTATCGTGTCATATTCAATTGCCTAGGGACAAACGTTTCTCATTGTTCTTCAAAAAGTTTTACTTT
ATTGTTCTTTTATTAAAGCAACACCTAACTTTTATTTCACGTTCATTATTATATCTTGCAAACCTATCCCATTACACTTC
TAAACTAATTATTCTTGTTTTAGGTAAAGTGAGTGTTAGTGTACGTAGAGTTGAATAGGTGGTCGATAGAACTTGAGAGA
ATATTAATTCTACCTTTAACTCCTCGTTGGGTTCGACACTCTTATTTATATAAAAGGCTACAAGTGATCCTCTATACTTG
TGGGTTATCGGACACCACAGTTCACATTGGAGATGGGAGGAAGGCAAAGTTCTGGAAATCA-------TCCCAGGCATGT
GACCCAAAGATATTGCTCCTAGGATCTTTGACCTCTCGAAAAAGAAATATACTGGGAATCATCCAAACTGCTCTTCTCAA
CAATTATTGGGTTAGTTAGATTAATGCCCATCATGGGATCATCCTGGAGCACATACTAGAGTTCATCACACTTTGAGAGA
AGCTATCCTCTGTTACT---CTCAACAACGGTGTGCAAGATACTATCTTCTGGAAGATCACCTCTCAAGGAGAATAGTCG
GTGTCGACTACCCATATGGTGTAGTTTGCGGGACATACGAACTAGCATCATGCCTGCTGTTGTTTGAAAGGTTTGGGGCC
CCTCCGAAATGCAAGTCTTTTGCTTGGTTGATTATTATAAACATAGTATGGCCGACCGATCGATTGCCCCATCATGGCTG
ACCGAACTGCAACCTTTGCTCACTTTGTAAGAAAGTCCAGGAAACCATGGCACATCTTCTCTTCCAGTGCAGGTTCTCCT
AATGTGTTTTGGCCAAGGTTGCATCGTGGATTGGCCTACATGATGATGTGGTGAAGGGATGGT-ATTTGAGGCTTCGGTT
CGAGAATGGTGGATTAAAAATGTGATTGAGCGT--GGAAACTAGAGAAAGGCTATGTCCACCTTGTTCATTTTTATGTCT
TGGG-AGATTTGGAAAGAGCGCAACACGGGGGTCTTTCACAGCACCGTTGCTACGATGATGATGGTCGTCGCGAAGATCA
AAGAGGAAGCTCATCTTTGGGCTATAGCCGGTGCCACCCACTTGAATATTGTAATACCGCGAGAGTAGTAGTTATTTGT-
TCC-GGCGTTGTGACCATT----TAAAACCTTCTTTCTTAATCAGTGAAAATGGAAAATATTTTGCCTTGCTTAAAAAAG
GTATTGGGCCTGTTTGGTTTATGCCCCCAACTCACCCTACCAAAATATTGGTCATGCCAAATTCCTTATGTGTTGTTTGG
CTTGTCGCCAAATATTTGGCTGCCAACGAGTTCATTGTTGCTTCCTTCACAGATTCTTGCCAAATCTTTGGCCAACCCTG
GGCGTTGGAATCCCATGCCAAATAATTGGCAAGCCAATATTGGTAGGGCAGCTATAGGCAAGAACCAAACATACCCATTA
AGCCCACCAGGCCCAAGAGCTTTCTCATTGTGCGTGGAATTGATCTCATCTTTTATTCCCTCTATAGTAAAGGGAAGGAA
TTTGTAGTCTTTTTTTGCGAGGGTAAATGGAGTTTATTGCATGGGTAAAGAGTTACAGTCAAGAGGCCACAAGTCCTCGA
TACAAGGTGGAACCGAGCCTAGCCAAACAGCAGTGGCATGCTCGGTGCGGCTATACTTAGCCAATTGATCAGCAACTCTA
TTCTGAAATCTAGAAATCTTTTGAGGAAAAAACTCCCTACTACCTAACAGGCCCTTGATCTCCAAGACAATCTGTCTGTA
AGCCGAGCGAAGAAGTGCGCCATTAGTCAGACATGATAGCGCTTCCGAGGAGTCCGTTTGCACCACCACCGGTAGATGAG
AATGCTGAATTGCAATGGCCAAGCCCTGCATTATCGCATGTAGTTCTGCCTCAAGCGGGTCGTTGTAGTAGAAGATGAAA
AGATAGGCCGCCATGAGGACCTCGCCCTTCTCATTTCTGAGTACCATGCCGATAGCAGCTGAGCCGCCGTCCTTGAGGAA
CGAGCCGTCGACGGACAGCGCCAGTCTTTCCTGGCAAGGCGCCGACCAGGGGGCTTCGGGTGGCTTGTCACTTCGACAAG
GAGCAGGAACAGCCGAAAGTGGCATCTTGCCCTT
>chr1D_329
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------CGGCCACCACGGTTCACATTGGAGATGGAGGTAAGGCGAAGTTCTGGGAATCACCCTGGCTCCAAGGCATGA
GACCCAAAGATATTGCTCTTAGGATCTTTGACCTCTCAAAAAAGAAATCTTGCTCA----GTCCAAACTGCTCTCCTCAA
CAACTTTTGGGTTAATCAAATTGATACCCATCATGGGATCACCCTTGAGAACCTACATGAGTTCACCACACTTTGGGAGA
AACTATCCTCTGT---T---CTCAACAACAGTGTGCAAGATACTATCCAATGGAAGTTCACCTCTCAAGGAGAATACTCG
ACATCGACTGCCTATATGGCGCTGTTTGCGGGACACAC-GACTAGCATCATGCCTGCTGCTGTTTGGAAGGTTTGGG-CC
CCTCCGAAATGCAAGTTTTTGCTTGGGTTCATAATTCAAAACAGAGTATGGACGGCCGATCGATTGCTCCGCCGTGGCTG
GCCGAACTGCAACCTTTGCCCGCTTTGCAAGCAATTCCAGGAAATGGCGGCGCATCTTCTCTTCCAGTGTAGGTTCTCCC
AGCGTGTTTGGGTTGAGGTTGCTGCGTGGATTAGCCTACATGGTGATGTGGTGAGGAGCTGGAGAGTTGAGGCTTCAGTT
CGAGATTGGTGGATTTAAAATGTGATTGAGCGCGCGGAAACCAGAGAAAGGCGATCGCCTCCTTGTTCATGCTTATGTCT
TGGG-AGATTTGAAAAGAGCGTAACGCAAGGGTCTTTCGCAACACTCCCGCTACAACGATGATGGTCGTCGCGAAGATCA
AAGAGGCGGTCCATCTTTGGGCTATGGCAGGTGTCACCCACTTGAGTATTGTAATGCTGCGAGAGTAGT---TCTTTGT-
TCCCCGCTTTGCGGCTATTTGTCTAAAACCTTCTTCCTTAATCAATGAAAATGGCAAATCTTTTGCCTTGTTTCAAAAAA
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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----------------------------------
>chr5B_329
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------CGGCCACCACGGTTCACATTGGAGATGGAAGAAAGGTGAAGTTCTGGGAATCATCATGGCTCCAAGGCATGA
GACCCAAAGATATTGCTCCTAGGATCTTTGACCTCTCGAAAAAGAAATCTTGCTCG----GTCCAAATTGCTCTCCTCAA
CAATTTTTGGGTTAGTCAGATTGATACCCATCATGGAATCACCCTGGAGCACCTACAGGAGTTCACCACACTTTGGGAGA
AACTATCCTCTGT---TATTCTCAACAATAGTGTGCAAGATACTATCCACTGGAAGTTCACCACTCAAGGAGAATACTCG
GCGTCTACTGCCTATATGGTGTAGTTTGCGGGAAACAC-AACTAGCATCATGCTTGCTGCAGTTTGGAAGGTTTGGGGC-
-CTCCGAAGTGCAAG-TTTTTGCTTGGTTGATAATTCAAAGTAGAGTATAGACGGTCGACCGATTGCTCCGTTGTGGCTG
GCCGAACTGCAACCTTTGCTCGCTTTGCAAGCAAGTTCAGGAAACCACAACGCATATTCTCTTCCAGTGCAGGTTCTCCC
AACGTGTTTGGGTACAGGTTGCTGCGTGGATTGGCCTACATAGTGATGTGGTGAGGAGCTGGAGATTTGAGGTTTCAGTT
TGAGAATGGTGGATTAAAAATGTGATTGAGCGT--GGAAATCAGAGAAAGGCAATCGCCTCCTTGTTCATGTTAATGTCT
TGGG-AGATTTGGAAAGAGCGCAACGCAAGGGTCTTTCGCAATAACGCCGCTGCTACGATGATGGTCGTCGCGAAGATCA
AAGAGGAGGTCCATCTTTGGGCTTTGGTAGGTGCCACCCACCTGAGTATTGCAATGCCGTGAGCGTAGT---TCTTTGT-
TCCCCGCTTTTCGGCTATTTGTCTAAAATCTTCTTCCTTAATCAATGAAAATGGCAAATCTTTTGCCTAGTTTCAAAAAA
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------
>chr3B_329
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------CGGCCACCACGGTTCACAATGGAGATGGAGGTAAGGCGAAGTTCTGGGAATCACCCCGTCTCCAAGGCATGA
GACCTAAAGATATTGCTCCTAGGATCTTTGAGCTCTCAAAAAAGAAATCTTGCTCA----GTCCAAACTACTCTCCTCAA
CAATTTTTGGGTTAATCAAATTGATACCCATCATGGGATCACCCTTGAGCACCTACAGGAGTTCACCACACTTTGGGAGA
AACTATCCTATGTTACT---CTCAACAACAGTGTGCAAGATATTATCCACTGGAAGTTCACCTCTCAAGGAAAATACTCG
ACGTCGACTGCCCATCTGGCGCAGTTAGCAGGACACAT-GACTAGCATCATGCCTGCTGCTATTTGGAAGGTTTGGA-CC
CCTCCGAAATTCAAGTTTTTTGCTTGGTTGATAATTCAAAACAGAGTATGGACGGCCGATCGATTCCTCCGCTGTGGCTG
GCCGAACTGCAACCTTTGCTCGCTTTGCAAGCAAGTCCAGGACGCGGCGGCGCATCTTCTCTTCCAATGTAGGTTCTCCC
AGCGTGTTTGGGTTGAGGTTGCTGCGTGGATTGGCCTACATGGTGATGTGGTGAGGAACTGGAGAGTTGAGGCTTCAGTT
CGAGATTGGTGGATTAAAAATGTGATTGAGCGC--GGAAACCAGAGAAAGGCGATCGCCTCCTTGTTCATGCTTATGTCT
T-GG-AGATTTGGAAAGAGCGTAACACAAGGGTCTTTTGCAACCTTACCGCTACAATGATGATGGTCGTCGCGAAGATCA
AAGAGGAGGCCCATCTTTGGGCTATGGCAGGTGCCACGCACTTGAGTATTGTAATGCTGCGAGAGTAGT---TCTTTGT-
TCCCCGCTTTGCGGCTATTTGTCTAAAACCTTCTTCCTTAATCAACAAAAAGGGCAAATCTTTTGCCTTGCTTAAAAAA-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------
>chr7B_330
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------GGCCACCACGGTTCACATTGGAGATGGAGGTAAGGCGAAGTTTTGGGAATCACCCTGGCTCCAAGGCATGA
GACCCAAAGATATTGCTCCTAGGATCTTTGACCTCTCAAAAAAGAAATCTTGCTCA----ATCCAAACTGCTCTCCTCAA
CAATTTTTAGGTTAATCAAATTGATACCCATCATGGGATCACCCTTGAGCACCTACAGGAGTTCACCACACTTTGGGAGA
AACTATCCTCTGTTACT---CTAACCAACAGTGTGCAAGATACTATCCACTGGAAGTTCACCTCTCAAGGAGAATACTCG
ACGTTGACTGCCTATGTGGCGTAGTTTGCGGGACACAT-GACTAGCATCATGCATGCTGCTGTTTCGAAGTTTTGGG-CC
TCTCCGAAATGCAAGTTTTGTGGTTGGTTGATAATTCAAAACAGAGTATGGATGGCCGATTGATTGCTCCGTCGTGGCTA
GCCGAACTACAACCTTTTCCCTCTTTGCAAGCAAGTCCAGGAAACAGTGGCGCATCTTGTCTTCCAGTGTAGGTTCTCCC
AGCGTGTTTGGGTTGAGGTTGCTACGTGGATTGGCCTACATGGTGATGTGGTGTGGAGCTGGAGAGTTGAGGCTTCAGTT
CGAGACTGGTGGATTAAAAATGCGATTGAGCGC--GGAAACCAGAGAAAGGCGATCGCCTCCTTGTTCATGCTTATGTCT
T-GGGAGATTTGGAAAGAGCATAACGCAAGAGTCTTTCGCAACACTGCCGCTACAACGATGATGGTCATCGAGAAGATCA
AAGAGGATGCCCATCTTTGGGCTATGGCAGGTGCCACCCACTTGAGTATTGTAATACCGCGAGAGTAGT---TCTTTGT-
TCCCCGCTTTGCGGCTATTTTTGTCAAACCTTCTTCCTTAATCAATGAAAATGGCAAATCTTTTGCCTTGTTTCAACAAA
A-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------
>chrUn_333
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------CACCACGGTTCACATTGGAGATGGAAGAAAGGCAAAGTTCTGGGAATCATCATGGCTCCAAGGCATGA
GACCCAAAGATATTGCTCCTAGGATCTTTGACCTCTCGAGGAAGAAATCTTGCTCG----GTCCAAATTGCTCTCCTCAA
CAATTTTTGGGTTAGTCAGATTGATACCCATCACGGAATCATCCTGGAGCACCTACAGGAGTTCATCACACTTTGGGAGA
AACTATCCTCTGT---TATTCTCAACAATAGTGTGCTAGATACTATCCACTGGGAGTTCACCACTCAAGGAGAATACTCG
GCGTCTACTGCCTATATGGCGCAGTTTGCAGGACACAC-AATTAGCATCATGCCTGTTGCTGTTT-GAAGGTTTGGG-CC
CCTCCGAAGTGCAAGTTTTTTGCTTGGTTGATAATTCAAAACAGAGTATGGACGGCCGATCGATTGCTCCATCGTGGCTG
GCCAAACTGCAACCTTTGCCCGCTTTGCAAGCAAGTTCAGGAAACCGCGGCGCATATTCTCTTCCAGTGCAGGTTCTCC-
AACGTGTTTGGGTACAGGTTGCTGCGTGGATTGGCCTACATGGTGATGTGGTGAGGAGTTGGAGATTTGAGGTTTCGGTT
CGAAAATGATGGATTAAAAATGTGATTGAGCGT--GAAAACCAGAGAAAGGCAATCGCCTCCTTGTTCATGTTAATGTCT
T-GGGAGATTTAGAAAAAGCGCAACGCGAGGGTATTTCGCAACACCACTGCTACTACGATGATGGTCGTCGCAAAGATCA
AAGAGGAGGCCCATATTTGGGCTTTGGCAGGTGCCACCCATTTGAGTATTGTAATGCCGCGAGAGTACT---TCTTTGT-
CCC-TGCTTTGCGGCTACTTGTCTAAAACCTTCTTCCTTAATCAATGAAAATGGCAAATCTTTTGCCTTGTTTCAAAAAA
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------
>chr2B_333
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------CACCACGGTTCATATTGGGGATGGAGGTAAGGCGAAGTTCTAGGAATCACCCTGGCTCCAAGGCATGA
GAACCAAAGATATTGCTCCTAGGATATTTGACCTCTCAAAAAAGAAATCTTGCTCG----GTCCAAATTGCTCTCCTCAA
CAATTTTTGGGTTAGTCAAATTGATACCCATCATGGACTCACCCTGGAGCACCTACAGGAGTTCATCACACTTTGGGGGA
AACTATCCTCTATTACT---CTCAACAACAGTGTGCAAGATACTATCCACTGAAAGTTCACCTCTCAAGGAGAATCCTCG
ATGTCGACTGCCTATATGGTGTAGTTTGCGGGACACAT-AACTAGCATCATGCCTGCTGTTGTTTGGAAGGTTTGGG-CC
CCTCCGAAATGCAAGTTTTTTGCTTGGTTGATAATTCAAAACAGAGTATGGACGGCCGATCGATTGCTCCGTCGTGGTTG
GCCGAATTGCAACCTTTGCCCGCTTTGCAAGCAAGTCCAGGAAACTGCGGCGCATCTTCTCTTCTAGTGTAGGTTCTCCC
AGCGTGTTTGGGTTGAGGTTGATACGTGGATTGGCCTACATGGTGATGTGGTGAGGAGCTGGAGATTTGAGGCTTCAGTT
CAAGATTGGTGGATTAAAAATGTGATTGAGCGC--GGAAACCAGAGAAAGGCTATCACCTCCTTATTCATGCTTATGTCT
T-GGGAGATTTGGAAAGAGCGCAACGCAAGGGTCTTTCGCAACACTGCCGCTACAACGATGATGGTCGTCGCGAAGATCA
AAGAGGAGGCCCATATTTGGGCTATGGCAGGTGCCACCCACTTGAGTATTGTAATGCCGCGAGAGTAGT---TCTTTGT-
TCCCTGCTTTGTGGCTTTTTGTCTAAAACTTTCTTCCTTAATCAATGAAAATGACAAATCTTTTGCCTTGTTTCAAAAAA
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------
>chr1B_333
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------CACCATGGTTCACATTGGGGATGGAGGTAAGGCGAAGTTCTGGGAATCACCCTGGCTCCAAGGCATGA
GACCCAAAGATATTGCTCCTAGGATATTTGACCTCTCAAAAAAGAAATCTTGCTCG----GTCCAAATTGCCCTCCTCAA
CAATTTTTGGGTTAGTCAAATTGATACCCGTCATGGGATCACCCTTGAGCACCTACAGGAGTTCATCACACTTTGGGGGA
AACTATCCTCTATTACT---CTCAACAACAGTGTGCAAGATACTATCCACTGGAAGTTCACCTCTCAAGGAGAATACTCG
ACGTCGACTGCCTATATGGCGCAGTTTGCGGGACACAC-AACTAGCATCATGCCTGCTGCTGTTTGGAAGGTTTGGG-CC
CCTCCGAAATGCAAGTTTTTTGCTTGGTTGATAATTCAAAACAGAGTATGGACGGCCGATCGATTGCTCCGTCGTGGTTG
GCCGAATTGCAACCTTTGCCCGCTTTGCAAGCAAGTCCAGGAAACTGCGGCGCATCTTCTCTTCCAGTGTAGGTTCTCCC
AGTGTGTTTGGGTTGAGGTTGCTTCGTGGATTGGCCTACATGGTGATGTGGTGAGGAGCTGGAGATTTGAGGCTTGAGTT
CGAGATTGGTGGATTAAAAATGTGATCGAGCGC--GGAAACCAGAGAAAGGCTATCGCCTCCTTATTCATGCTTATGTCT
T-GGGAGATTTGGAAAGAGCGCAATGCAAGGGTCTTTCGCAACACTGCCGCTACAAGCGTGATGGTCGCCGCGAAGATCA
AAGAGGAGGCCCATCTTTGGGCTATGGCAGGTGCCACCCACTTGAGTATTGTAATGCCGCGAGAGTAGT---TCTTTGTT
CCC-CGCTTTGCGGCTATTTGTCTAAAACCTTCTTCCTTATTCAATGAAAATGGCAAATCTTTTGCCCTGTTTAAAAAA-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------
>chr7B_333
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------CACCATGGTTCACATTGGGGATGGAGGTAAGGCGAAGTTCTGGGAATCACCCTGGCTCCAAGGCATGA
GACCCAAAGATATTGCTCCTAGGATATTTGACCTCTCAAAAAATAAATCTTGCTCG----GTCCAAATTGCTCTCCTCAA
CAATTTTTGGGTTAGTCAAATTGATACCCGTCATGGGATCACCCTGGAGCACCTACAGGAGTTCATCACACTTTGGGGGA
AACTATCCTCTATTACT---CTCAACAACAGTGTGCAAGATACTACCCACTGGAAGTTCACCTCTCAAGGAGAA-ACTCG
ACGTCGACTGCCTATATGGCGCAGTTTGCGGGACACTC-AACTAGCATCATGCCTGCTGCTGTTGGGAAGGTTTGGG-CC
CCTCCGAAATGCAAGTTTTTTGCTTGGTTGATAATTCAAAACAGAGTATGGACGGCCGATCGATTGCTCCGTCGTGGTTG
GCCGAATTGCAACCTTTGCCCGCTTTGCAAGCAAGTCCAGAAAACTGCGGCGCATCTTCTCTTCCAGTGTAGGTTCTCCC
AGCGTGTTTGGGTTGAGGTTGCTTTGTGGATTGGCCTACATGGTGATGTGGCGAGGAGCTGGAGATTTGAGGCTTCAGTT
CGAGATTGGTGGATTAAAAATGTGATCGAGCGC--GGAAACCAGAGAAAGGCTATCGCCTCCTTATTCATGCTTATGTCT
T-GGGAGATTTGAAAAGAGCGCAATGCAAGGGTCTTTCGCAACACTGCCGCTACAAGCGTGATGGTCGTCGCGAAGATCA
AAGAGGAGGCCCATCTTTGGGCTATGGCAGGTGCCACCCACTTGAGTATTGTAATGCCGCGAGAGTAGT---TCTTTGTT
CCC-CGCTTTGCGGCTATTTGTCTAAAACCTTCTTCCTTAATCAATGAAAATGGCAAATCTTTTGCCTTGTTTCAAAAAA
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------
>chr4D_400
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------AAGATATTGCTCCTAGGATCTTTGACCTCTCAAAGAAGAAATCTTGCTCG----GTCCAAATTACTCTCCTCAA
CAATTTTTGGGTTAGTCAAATTGATACCCATCATGGGATCACCCTGGAGCACCTACAGGAGTTCATCAGACTTTGGGGAA
AACTATCCTCTATTACT---CTCAACAACAGTGTGCAAGATACTATCCACTGGAAGTTCACCTCTCAAGGAGAATACTCG
ACGTCGACTGCCTATATGGCGCAGTTTGCGGGACACAC-AACTAGCATCATGCCTGCTGCTGTTTGGAAGGTTTGGG-CC
CCTCCGAAATGCAAGTTTTTTGCTTGGTTGATAATTCAAAACAGAGTATGGACGGCCGATCGATTGCTCCGTCGTGGTTG
GCCGAACTGCAACCTTTGCCCGCTTTGCAAGCAAGTCCAGGAAACTGCGGCACATCTTCTCTTCCAGTGTAGGTTCTCCC
AGCGTGTTTGGGTTGAGGTTGCTACGTGGATTGGCCTAAATGGTGATGTGGTGAGGAGCTGGAGATTTGAGGCTTCAGTT
CGAGATTGGTGGATTAAAAATGTGATTGAGCGC--GGAAACCAGAGAAAGGCTATCGCCTCCTTATTCATGCTTATGTCT
T-GGGAGATTTGGAAAGAGCGCAACGCAAGGGTCTTTCGCAACACTGCCGCTACAATGATGATGGTCGTCGCGAAGATCA
AAGAGGAGGCCCATCTTTGGGCTATGGCAGGTGCCACCCACTTGAGTATTGTAATGCCGCGAGAGTAGT---TCTTTGTT
CCC-CGCTTTGCGGCTATTTGTCTAAAACCTTCTTCCTTAATCAATGAAAATGGCAAATCTTTTGCCTTGTTTCAAAAAA
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------
>chr7B_1586
AGTTT---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------TTTTTGCGGGGGTAAAGGGAGTTTATTGCATGGATAAAGAGTTACAGTCAAGAGGCCACAAGTCCTCGA
TACAAGGTGGCACCAAGCCTAGCCAAACAGCAGTGGCACACTCGGTGCGGCTATACTTAGCCAATTGATCAGCAACTCTA
TTCTGAAATATAGTAAACTTTTGAGGAAAAAACTCCCTACTACCTAAAAGGTCCTTGATCTCCAAAACAATCTATCCATA
TGCCGAGCGAAGAAGTGCGCCATTAGTCAGACATGATAGCGCCTCCGAGGAGTCTGTTTGCACCACCACCGGGAGATGGG
AATGCTGAATTGCAAGGGCCAAGCCCTGTATTATCACATGTAGTTCTGCCTCAAGCGGGTCGTTGCAATAGAAGATGAAA
CGATAGGCCGCCATGAGAACCTCTCCCTTCTCATTTCTAAGTACCATACCGATAGCAGCTGAGCCGTCGTCCTTGAGGAA
CGAGCCGTCGACGGATAGTGCCAGTCTTCCCTGGCACGGAGCCGGCCAGGAGGCTTCGGGTGGCTTGTCACCACGGCAAG
GGACATGAACAGCTGAAAGAGGCATCTTGCCCTT
>chr1B_1588
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------TCTTTTTTTG-CGGAGTAAAGGGAGTTTATTGAATGG-TATAGAGTTACAGTCAAGAGGCCACAAGCCCTCGA
TACAAGGTGGAAACGAGTCTAGCCAAACAGCAGTGGCACGCTTAGTGCGGCTATACTTAGCCAATTGATTAGCAACTCTA
TTCTGAAATCTAGTGATCTTTTGAGGAAAAAACTCCCTACTACCTAAAAGGTCCTTGATCTCCAAGACAATCTGTCCATA
TGCCGAGCGAAGAAGTGCACCATTAGTCAAGCATGATAACGCTTCCGAGGAGTCCGTTTGCACCACCACCGGGAGATGAG
AATGTTGAATCGCAAGGGCTAAGCCCTGCATTATCACATGTAGTTTTGCCTCAAGTTGATCGTTGCAGTAGAAGATGAAA
CGATATGCTGCCATAAGCACCTCTCCCTTACCGTTTCTAAGCACCATGCCAATAGCTGCTGAGCCGTCGTCCTGAAGGAA
CGAGCCGTCGACGGACAGCGCCAGTCTACCGTGGCACGACACCGGCCCGGGGGCTTCAAGTGGCTTGTCACTGCGGCAAT
GGACAAGGACAGCTGACAATGGCATCTTGCCCTT
>chr5A_1589
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------CTTTTTTTGCGAGGGCAAAGGGAGTTTATTGCATGGGTAAAGAGTTACAGTCAAGAGGCCACAGGTCCTCGC
TACAAGGTGGAATCGAGCCTAGTCAAACAGCAGTGGCACGCTCGGTGCGGCTATACTTAGCCAATTGATCGGCAACTCTA
TTCTGAAATCTAGAAATCTTTTGAGGAAAAAACCCCCTACTACCTAACAAGTCCTTGATCTCCAAGGCAATCTGTCCGTA
GGCCGAGCGAAGAAGTGCGCCATGGGTCAGACATGATAGCGCTTCCGAGGAGTCCGTTTGCACCACCACCGGGAGATGAG
AATGCTGAATTGCAAGGGCCAAACCCTGCATTATCGCATGTAGTTCAGCCTCAAGCGGGTCGTTGCAATAGAAGATGAAA
CAATAGGCCGCCATGAGGACTTCTCCCTTCTCATTTCTGAGTACCATGCCGATTGCAGCTGAGCCGTCGTCCTTGAGGAA
CGAGCCGTCGACGGACAGCGCCAGTCTTCCCTGGCACGGCGCTGGCCAGGGGGCTTCGGGTGGCTTGTCAGTCCGACAAG
GAACAGGAACAACCGAAAGTGGCATCTTGCCCTT
>chr5B_1589
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------CTTTTTTTGCGAGGGTAAAGGGAGTTTATTGCATGGGTGAAGAGTTACAGTCAACAGGCC--AAGTCCTCGA
TACATGCTGGAACCGAGCCTAGCCAAACAACAGTGGCATGCTCGGTGCGGCTATACTTAGTCAAATGATCAGCAACTCTA
TTCTAAAACCTAGAAATCTGTTGAGGAAAAAACTCCCTACTACCTAACAGGTCCTTGATCTCCAAGACAATCTGTCCGTA
AGCATAGCGAAGAAGTGCACCGTCGGTCAGACATGATAGCGCTTCCGAGGAGTCCGTTTGCACCACCACCGGGAGGTTAG
AATGCTGAATTGCAAGGGCCAAGCCCTGCATTATCCCATGCAGTTCAGCCTCAAGCGGGTCATTGCAATAGAAGATAAAA
CGATAGGCCGCCATGAGGATCTCTCCCTTCTCATTTCTGAGAACCATGCCAATAGCAGCTGAGCCGTCCTCCTTGAGGAA
CGAGCCATCGACGGACAGCGCTAGTCGTCTCTGGCACAGCGCCGGCCAGGGGGCTTCGGGTGGCTTGTCGTTACGACAAG
GAACAGGAGCAGCCGACAGTGGCATCTTGCCCTT
>chr6B_1590
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------TTTTTTTGCGAGGGTAAAGGGAGTTTATTGCATGGGTAAAGAGTTACAGTCAAGAGGCCACAAGTTCTCGA
TACAGGGTGGAACCGAGCCTAGCCAAACAGCAGTGGCACGCTCGGTGCGGCTATACTTAGCCAAATGATCAACAACTCTA
TTTTGAAATCTAGAAATCTTTTGAGGAAAAAACTCCCTACTACCTAACAGGTCCTTGATCTTCAAGACAATCTGTCCGTA
AGCCGAGCGAAGAAGTGCGCCATTGGTCAGACATGATAGCGCTTCCGAGGAGTCCGTTTGCACCACCACCGGGAGATGAG
AATGCTGAATTGCAAGGGCCAAGCCCTGCATTATCGCATGTAGTTCTGCCTCAAGCGGGTCATTGCAATAGAAGATAAAA
CGATAGGCCGCCATGAGGACCTCTCCCTTCTCGTTTCTGAGTACCATGCCAATAGCAGCTGAGCCGTCGTCCTTGAGGAA
CGAGCCATCGACGGACAACGCAAGTCGTCCTTGGCACGGCGCCAGCCAGGGGGCTTCGGGTGGCTTGTCACTATGACAAG
GAACAGGAACAGCCGAAAGAGGCATCTTGCCCTT
>chr7D_1590
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------TTTTTTTGCGAGGGTAAAGGGAGTTTATTGCATGGGTAAAGAGTTACAGTCAAGAGGCCACAAGTCCTCGA
TACAAGGTGGAACCGAGCCTAGCCAAACTGCAGTGGCACGCTCGGTTCGACTATACTTAGCCAATTGAT-GGCAACTCTA
TTCTGAAATCTAGAAATCTTTTGAGGAAAAAACTCCCTGCTACCTAACAGGTCCTTGATCTCCAAGACAATCTGTCCGTA
AGCCGAGCGAAGAAGTGCGTCATTGGTCAAACATGATAGCGCTTCAGAGGAGTCCGTTTGCACCACCACCGGGAGATGAG
AATGCTGAATTGCAAGGGTCAAGCCCTGCATTATCGCATGTAGTTCTGCCTCAAGCGGGTCGTTGCAATAGAAGATGAAA
CGATAGGCCGCCATAAGGACCTCTCCCTTCTCATTTCTGAGTACCATGCCGATAGCAGCTGAGCCGTCGTCCTTGAGGAA
CGAGCCGTCGACGGACGGCGCCAGTCTTCCCTGGCCCGGCGCCGGCCAGGGGGCTTCGGGTGGCTTGTCGCTCCGACAGG
GACTAGGAAGAGCCGAAAGTGGCATCTTGTCCTT
>chr7B_1590
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------TTTTTTTGCGAGGGTAAAGGGAGTTTATTGCATGGGTAAAGAGTTACAGTTAAGAGGCCACAAGTCCTAGA
TACAGGGTGGAACCGAGCCTAGCCAAACAGCAGTGGCACGTTCGGTGCGGCTATACTTAGCAAAATGATCAGCAACTCTA
TTCTGAAATCGAGAAATCTTTTGAGGAAAAAACTCCCTACTACCTAACAGGTCCTTGATCTCCAAGACAATCTGTCCGTA
AGCCGAGCGAAGAAGTGCGCCATTGGTCAGACATGATAGCGCTCCCGAGGAGTCCGTTTGCACCACCACCGGGAGATGAG
AGTGCTGAATTGCAAGGGCCAAGCCCTGCATTATCGCATGTAGTTCTGCCTCAAGCGGGTCGTTGCAATAGAAGATAAAT
CGATAGGCCGCCATGAGGACCTCTCCCTTCTCGTTTCTGAGTACCATGCCAATAGCAGCTGAGTCGTCGTCCTTGAGGAA
CGAGCCGTCGACGGACAACGCCAGTCGTCCTTGGCACGGCGTCGGCCAGGGGGCTTCGGGTGGCTTGTCACTATGACAAG
GAACAGGAACAGCCGAAAGAGGCATCTTGCCCTT
>chr4A_1591
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----------TTTTTTG-GAGGGTAAAGGGAGTTTATTTCATGGGTAAAGAGTTACAGTCAAGAGGCCACAAGTCCTCGA
TACATGGTAGAACCGAGCCTAGCCAAACAGCAGTGCCACGCTCGGTGCGGCTATACTTAGCCAAATGATCAGCAACTCTA
TTCTGAAATCTAGAAATCTTTTGAGGAAAAACCTCCCTACTACCTAACAGGTCCTTGATCTCCAAGACAATCTGTCTGTA
AGCAGAGTGAAGAAGTGCACCATC-GTCAGACATGATAGCGCTTCCGAGGAGTCCGTTTGCACCACCACCGGGAGATTAG
AATGCTGAATTGCAAGGGCCAAGCCCTGCATTATCGCATATAGTTCTGCCTCAAGCGGGTCGTTGCAATAGAAGATAAAA
CGATAGGCCGCCATGAGGATCTCTCCCTTCTCGTTTCTGTGTACCATGCCAATAGCAGCTGAGCCGTCATCCTTGCGGTA
CGAGCCGTCAACGGACAGCGCCAGTCGTCCTTGGCACGGCGCCGGCCACGGGGCTTTGGGTGACTTGTCGTTACAACAAG
GAACAGGAACAGCCGAAAGTGACATCTTGCCC--
>chr7B_1609
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----------------------------GGAGTTTATTGCATGGATAAAGAGGTACAGTCAAGAGGCCACAAGTCCTCGA
TACAAGGTGGCACCAAGCCTAGCCAAACAGCAGTGGCACACTCGGTGCGGCTATACTTAGCCAATTGATCAGCAACTCTA
TTCTGAAATATAGTAAACTTTTGAGGAAAAAACTCCCTACTACCTAAAAGGTCCTTCATCTCCAAAACAATCTATCCATA
TGCCGAGCGAAGAAGTGCGCCATTAGTCAGACATGATAGCGCCTCCGAGGAGTCTGTTTGCACCACCACCGGGAGATGGG
AATGCTGAATTGCAAGGGCCAAGCCCTGTATTATCACATGTAGTTCTGCCTCAAGCGGGTCGTTGCAATAGAAGATGAAA
CGATAGGCCGCCATGAGAACCTCTCCCTTCTCATTTCTAAGTACCATACCGATAGCAGCTGAGCCGTCGTCCTTGAGGAA
CGAGCCGTCGACGGATAGCGCCAGTCTTCCCTGGCACGGAGCCGGCCAGGAGGCTTCGGGTGGCTTGTCACCACGGCAAG
GGACATGAACAGCTGAAAGAGGCATCTTGCCCTT
>SNPs
SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSS---S------S-----------------S--S---------------S---------------S-------S
------------------------------------------------S-SSSSS-SSSS--------------S-----
-----S----------S-----S--S--------------------------S---SS-----------------S----
-S---------------------------S-----------------SS-------S-------------------S---
---------S-------------------------S--S---------------------------S-------------
----------------S---------------S---SS-----S-------S--S------------S-----S------
S--------------------S-----S---S-----------------------------------------------S
---------S--SSS-------S-------------------S-----------S-S-S---S-----------------
-----------------------------------------S-------------SS--S----------S---------
----------------------------S---------S--S-----S------S-------------------------
-------S--S--------------S--S----------------S-----------------------SSS-S------
----S--S-----S-S-------------------S--------S---------S----S-------------------S
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSS--------------------S----------------------------------------------------
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---------------------------------------------------S----------------------------
------------------------------------------------------------------------S-------
---------------S-------------------------------------------------S--------------
S----------------------S------------------------------------------S-------------
----------------------------S-------S-------S---------------------------S-------
--S-------------------------------
>forward_277
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-----------------AACTCCTCGTTGGGTTCGAC-------------------------------------------
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>reverse_1528
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-------CAGGCCCAAGAGCTTTCTCA-----------------------------------------------------
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