>input_sequence_87277
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---------------------------------------------------------------ATGACCGGTATAGGGAT
TACTAAGGGGACTAAAGAAACAAGAACAACAACGACTAATTCATCTGCCAATATATTCCCGAAAAGTCGAAAGCTAAGCG
ATAATGGTTTTGTGAAATCTTCTAGGATGTTAATTGGTAAAAGGATTGGAGTTGGTTTAATATATTTCTCGAAATAG---
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>chr1D_1_TraesCS1D01G070700
TATTGATATAATTAGAATTGCGGAAGCAAATACCAATTTACT--AAAAAAAGAAAAAAGTATCTAATCAAAATCAAAAGA
A-TT--TTTTTTAAGATTAAACAAAAGGGTTCGCAAATAAAAGCGCTAGTGCCATAACTAGTCCATAAATTGTTAAAGCT
TCCATAAAAGCTAGACTAAGCAATAAAGTACCTCGTATTTTACCTTCTGCTTCTGGCTGTCTCGCAATACCTTCTACAGC
TTGTCCTGCAGCAGTACCTTGACCAACTCCAGGTCCAATAGAAGCAAGCCCTACGGCCAATCTAGCAGCAATAACAGAAG
CAGCAGCAATTAGTGGATTCATGGTGAGTAGTTCCTTGTGTCA-AAAAAAGAAATGGTTAAGGATACAATCAACCAATAA
ATTCTTACTTCTAAGCTCTATTGGGGAGAAGTAAAGTAACTAAAAAGTAATAATTGAAATCAAATTGAAATGATAATGTG
AATTGTCCGAACTACATAGAAAGGAATTCCATATCCATATATCGGATTAGATAATGAATCTAACCTAGGAATATATAATA
TAATATCC----------TATATATATATACATTTGTTTCTTCTATTTTGTTTGCATATTTTCTCATTTTCTATTGAATC
GGATTCTAAAATCATTGCTTAAAGTGGAAACCTGCATAAAAGAGGACTCCACTTATAGACATTAAGGATATTATAGTATA
GATCTAGCCTGACTCCACCCTCCTTAATGCATATATACTTTGAAAATTCCATAATATAGTCTATTCTATTCTCTCTCCTA
CAACTCTAGGCTATATATTCATACGCATTTCTAACTATTTTT-TGCAACCAAGCAGATTATCTGGAACCATGCATGAATT
GAGCTAAGCTGCAA--AAAAAT----TACTATTTCCAAAAAGAGTCAATTCAATGATGACCCTCCATGGATTCACCTATA
TAGGGTGTGGCTAATGTTGCAAAAATAAGAGCTTGAATACCGCTTGTAAATAATCCAAGAAACATGACCGGTATAGGGAT
TACTAAGGGGACTAAAGAAACAAGAACAACAACGACTAATTCATCTGCCAATATATTCCCGAAAAGTCGAAAGCTAAGCG
ATAATGGTTTTGTGAAATCTTCTAGGATGTTAATTGGTAAAAGGATTGGAGTTGGTTTAATATATTTCTCGAAATAGCTC
AATCCTTTTTTGCTAAGACCAGCATAAAAATATGCCGCTGACATGAGTAAAGATAAAGCAGCAGTAGTATTTATATC--T
CGTGGGTGCTGCTAATTCCCCATGGGGTAACTCTATAATTTTCCAAGGTAAAAGAGCACCTGACCAATTCGAAACAAAAA
TAAAAAGGAACATAGTTCCAATAAAGGGAACCCAGGGACCATATTCTTCTCCAATCTGAGTTTTGCTCAAGTCTCGAATA
AACTCAAGGACATATTCAAAAAAATTCTGACCGTCGGTCGGGATGGTTTGTGGATTCCGAACAGCTATGACAACTGAACC
TAGCAAGATAGTAATTACGACCCAAGAAGTGATGAGTACTTGGGCATGAGTTTGGAAACCTCCTATTTGCCAATAGAAGT
GTTGGCCTACTTCTACACCCGATATATCATATAACCCCTTGAGTGTTTTAATGGAATAAGGTATAATATTCATATTGTCC
TGTGATAAAAATTGAACGTCAAAAAAGGAATTCTTTTGATTCAACCATCTCTTTCTCAACTCAGCAAATTGAAGTATTAA
TCTTATATTTAGGATACCAAGAAAGCACATCAGATCATAATATATATCAATACCCTCTAATATATATCAATATTCCCCTT
CTTTTTTCTATG---------------C------------------AAAAAAAATCTATGC----AAAAAAAGATATAGT
AAAGTAAGTGATTCCATAAATTTACGCAGTTGCCCAAGAATTCACTATATATTCTTAATCAACGATTTCTTATATAGAGA
GAACGGCCCTCACAAATTGAAAATACTAATTTGTTAATAATCAATCGAATTGAAGTCATAGTGTCATCGTTGGCTGGAAT
CGATATATTCGCGAGATCCGGGTCACAATTTGTATCGACTAAAGAAATAGTAGGAATCCCCAAAATGGCACATTCCCGAA
GAGCTATATACTCTTTTTGCTGATCATGGACGATCACAATGTCTGGCAATCTCATCATATATTTGATCCCGCCGAG
>chr1D_1
TATTGATATAATTGGAATTGCGGAAGCAAATACCAATTTACT--AAAAAAAGAAAAAAGTATCTAATCGAAAG-------
A-TT--TTTTTTAAGATTAAACAAAAGGGTTCGCAAATAAAAGCGCTAGTGCCACAACTAGTCCATAAATTGTTAAAGCT
TCCATAAAAGCTAGACTAAGCAATAAAGTACCTCGTATTTTACCTTCTGCTTCTGGCTGTCTCGCAATACCTTCTACAGC
TTGTCCTGCAGCAGTACCTTGACCAACTCCAGGTCCAATAGAAGCAAGCCCTACGGCCAATCCAGCAGCAATAACAGAAG
CAGCAGCAATTAGTGGATTCATGGTGAGTAGTTCCTCGTGTCAAAAAAAAGAAATGGTTAAGGATACAATCAACTAATAA
ATTCTTACTGCTAAGCTCTATTGGGGAGAAGTAAAGTAACTAAAAAGTACAAATTGAAATCAAATTGAAATGATAATGTG
AATTGTCCGAACTACATAGAAGGGAATTCCATATCCATATATCGGATTAGATAATGAATCTAACCTAGGAATATATAATA
TAATATCC----------T--ATATATATACATTTGTTTCTTCTTTTTTGTTTGCATATTTTCTCATTTTCTATTGAATC
GGATTCTAAACTCATTGCTTAAAGTGGAAACCTGCATAAAAGAGGACTCCACTTATAGACATTAAGGATATTATAGTATA
GATCTAGCCTGACTCCACCCTCCTTAATGCATATATACTTTGAAAATTCCATAATATAGTC--TTCTATTCTCTCTCCTA
CAACTCTAGGCTATATATTCATACGCATTTCTAACTATTTTT-TGCAACCAAGCAGATTATCTGGAACCATGCATGAATT
GAGCTAAGCTGCAA--AAAAAA----TACTATTTCCAAAAAGAGTCAATTCAATGATGACCCTCCATGGATTCACCTATA
TAGGCTGCGGCTAATGTTGCAAAAATAAGAGCTTGAATAATGCTTGTAAATAATCCAAGAAACATGACCGGTATAGGGAT
TACTAAGGGGACTAAAGAAACAAGAACAACAACGACTAATTCATCCGCCAATATATTCCTGAAAAGTCGAAAGCTAAGCG
ATAATGGTTTTGTGAAATCTTCTAGGATGTTAATTGGTAAAAGGATTGGAGTTGGTTTAATATACTTCTCGAAATAGCTC
AATCCTTTTTTGCTAAGACCAGCATAAAAATATGCCGCTGACGTGAGTAAAGCTAAAGCAACAGTAGTATTTATATCATT
CGTGGGCGCTACTAATTCCCCATGGGGTAACTCTATAATTTTCCAAGGTAAAAGAGCACCCGAGCAATTCGAAACAAAAA
TAAAAAGGAACATAGTTCCAATAAAGGGAACCCAGGGACCATATTCTTCTCCAATCTGAGTTTTGCTCAAGTCTCGAATA
AACTCAAGGACATATTCAAAAAAATTCTGACCGTCGGTCGGGATGGTTTGTGGATTCCGAACAGCTATGACAACTGAACC
TAGCAAGATAGTAATTACGACCCAAGAAGTGATGAGTACTTGGGCATGAATTTGGAAACCTCCTATTTGCCAATAGAAGT
GTTAGCCTACTTCTACACTCGATATATCGTATAACCCCTTGAGTGTTTTAATGGAACAAGGTATAATATTCATATTGTCC
TCTGATAAAAATTGAACTTCAAAAAAGGAATTCTTTTGATTCAACCATCTCTTTCTCAACTCAGCAACTTGAAGTATTAA
TCTTATATTTAGGATACCAAGAAAGCACATCAGATCATAATATATATCAATACCCTCTAATATATATCAATATTCCCCTT
CTTTTTTCTATG---------------C------------------AAAAA-------------------AAGATATAGT
AAAGTAAGTGATTCCATAAATTTACGCAGTTGCCCAAGAATTCACTATATATTCTTAATCAACGATTTCTTATATAGAAA
GAACAGCCCTCACAAATTGAAAATACTAATTTGTTAAGAATCAATCGAATTGAAGTCATAGTGTCATCGTTGGCTGGAAT
CGATATATTCGCGAGATCCGGGTCACAATTTGTATCGACTAAAGAAATAGTAGGAATCCCCAAAATGGCACATTCCCGAA
GAGCTATATACTCTTTTTGCTGATCAAGGACGATCACATTGTCTGGCAATCTCGTCATATATTTGATCCCGCCGAG
>chr3A_1
TATTGATATAATTGGAATTGCGGAAGCAAATACCAATTTACT--AAAAAAAGAAAAAAGTATCTAATCGAAATCGAAAGA
ATTT--TTTTTTAAGATTAAACAAAAGGGTTCGCAAATAAAAGCGCTAGTGCCACAACTAGTCCATAAATTGTTAAAGCT
TCCATAAAAGCTAGACTAAGCAATAAAGTACCTCGTATTTTACCTTCTGCTTCTGGCTGTCTCGCAATACCTTCTACAGC
TTGTCCTGCAGCAGTACCTTGACCAACTCCAGGTCCAATAGAAGCAATCCCTACGGCCAATCCAGCAGCAATAACAGAAG
CAGCAGCAATTAGTGGATTCATGGTGAGTAGTTCCTCGTGTCAAAAAAAAGAAATGGTTAAGGATACAATCAACCAATAA
ATTCTTACTTCTAAGCTCTATTGGGGAGAAGTAAAGTAACTAAAAAGTACAAATTGAAATCAAATTGAAATGATAATGTG
AATTGTCCGAACTACATAGAAGGGAATTCCATATCCATATATCGGATTAGATAATGAATCTAACCTAGGAATATATAATA
TAATATCC----------T--A--TATAAACATTTGTTTCTTCTATTTTGTTTGCATATTTTCTCATTTTCTATTGAATC
GGATTCTAAAATCATTGCTTAAAGTGGAAACCCGCATAAAAGAGGACTCCACTTATAGACATTAAGGATATTATAGTATA
GATCTAGCCTGACTCCACCCTCCTTAATGCATATATACTTTGAAAATTCCATAATATAGTCTATTCTATTCTCTCTCCTA
CAACTCTAGGCTATATATTCATACGCATTTCTAACTATTTTTTTGCAACCAAGCAGATTATCCGGAACCATGCATGAATT
GAGCTAAGCTGCAA--AAAAAAAAAATACTATTTCCAAAAATAGTCAATTCAATGATGACCCTCCATGGATTCACCTATA
TAGGCTGCGGCTAATGTTGCAAAAATAAGAGCTTGAATACCGCTTGTAAATAATCCAAGAAACATGGCCGGTATAGGGAT
TACTAAGGGGACTAAAGAAACAAGAACAACAACGACTAATTCATCCGCCAATATATTCCCGAAAAGTCGAAAGCTAAGTG
ATAATGGTTTTGTGAAATCTTCTAGGATGTTAATTGGTAAAAGGATTGGAGTTGGTTTAATATATTTCTCGAAATAGCTC
AATCCTTTTTTGCTAAGACCAGCATAAAAATATGCCGCTGACGTGAGTAAAGCTAAAGCAACAGTAGTATTTATATCATT
CGTGGGCGCTGCTAATTCCCCATGGGGTAACTCTATAATTTTCCAAGGTAAAAGAGCACCCGACCAATTCGAAACAAAAA
TAAAAAGGAACATAGTTCCAATAAAGGGAACCCAGGGACCATATTCTTCTCCAATCTGAGTTTTGCTCAAGTCTCGAATA
AACTCAAGGACATATTCAAAAAAATTCTGACCGTCGGTCGGGATGGTTTGTGGATTCCGAACAGCTATGACAACTGAACC
TAGCAAGATAGTAATTACGACCCAAGAAGTGATGAGTACTTGGGCATGAATTTGGAAACCTCCTATTTGCCAATAGAAGT
GTTGGCCTACTTCTACACCCGATATATCGTATAACCCCTTGAGTGTTTTAATGGAACAAGGTATAATATTCATATTGTCC
TCTGATAGAAATTGAACTTCAAAAAAGGAATTCTTTTGATTCAACCATCTCTTTCTCAACTCAGCAACTTGAAGTATTAA
TCTTATATTTAGGATACCAAGAAAGCACATCAGATCATAATATATATCAATACCCTCTAATATATATCAATATTCCCCTT
CTTTTTTCTATG---------------C------------------AAAAAAAATTCTATGCAAAAAAAAAAGATATAGT
AAAGTAAGTGATTCCATAAATTTACGCAGTTGCCCAAGAATTCACTATATATTCTTAATCAACGATTTCTTATATAGAGA
GAACGGCCCTCACAAATTGAAAATACTAATTTGTTAAGAATCAATCGAATTGAAGTCATAGTGTCATCGTTGGCTGGAAT
CGATATATTCGCGAGATCCGGGTCACAAATTGTATCGACTAAAGAAATAGTAGGAATCCCCAAAATGGCACATTCCCGAA
GAGCTATATACTCTTTTTGCTGATCAAGGACGATCACAATGTCTGGCAATCTCGTCATATATTTGATCCCGCCGAG
>chr5D_1
TATTGATATAATTGGAATTGCGGAAGCAAATACCAATTTACTAAAAAAGAAAAAAAAAGTATCTAATCGAAATCGAAAGA
A-----TTTTTTAAGATTAAACAAAAGGGTTCGCAAATAAAAGCGCTAGTGCCACAACTAGTCCATAAATTGTTAAAGCT
TCCATAAAAGCTAGACTAAGAAATAAAGTACCTCGTATTTTACCTTCTGCTTCTGGCTGTCTCGCAATACCTTCTACAGC
TTGTCCTGCAGCAGTACCTTGACCAACTCCAGGTCCAATAGAAGCAAGCCCTACGGCCAATCCAGCAGCAATAACAGAAG
CAGCAGCAATTAGTGCATTCATGGTGAGTAGTTCCTCGTGTCAAAAAAAAGAAATGGTTAAGGATACAATCAACCAATAA
ATTCTTACTTCTAAGCTCTATTGGGGAGAAGTAAAGTAACTAAAAAGTACAAATTGAAATCAAATTGAAATGATAATGTG
AATTGTCCGAACTACATACAAGGGAATTCCATATCCATATATCGGATTAGATAATGAATCTAGCCCAGGAATATATAATA
TAATATCCT--------AT--A--TATATACATTTGTTTCTTCTATTTTGTTTGCATATTTTCTCATTTTCTATTGAATC
GGATTCTAAAATCATTGCTTATAGTGGAAACCTGCATAAAAGAGGACTCCAATTATAGACATTAAGGATATTATAGTATA
GATCTAGCCTGACTCCACCCTCCTTAATGCATATATACTTTGAAAATTCCATAATATAGTCTATTCTATTCTCTCTCCTA
CAACTCTAGGCTATATATTCATACGCATTTCTAACTATTTTTTTGCAACCAAGCAGATTATCTGGAACCATGCATGTATT
GAGCTAAGCTGCAA--AAAAAA----TACTATTTCCAAAAAGAGTCAATTCAATGATGACCCTCCATGGATTCACCTATA
TAGGCTGCGGCTAATGTTGCAAAAATAAGAGCTTGAATACCGCTTGTAAATAATCCAAGAAACATGACCGGTATAGGGAT
TACTAAGGGGACTAAAGAAACAAGAACAACAACGACTAATTCATCCGCCAATATATTCCCGAAAAGTCGAAAGCTAAGCG
ATAATGGTTTTGTGAAATCTTCTAGGATGTTAATTGGTAAAAGGATTGGAGTTGGTTTAATATATTTCTCGTAATAGCTC
AATCCTTTTTTGCTAAGACCAGCATAAAAATATGCCGCTGACGTGAGTAAAGCTAAAGCAACAGTAGTATTTATATCATT
CGTGGGCGCTGCTAATTCCCCATGGGGTAACTCTATAATTTTCCAAGGTAAAAGAGCACCCGACCAATTCAAAACAAAAA
TAAAAAGGAACATAGTTCCAATAAAGGGAACCCAGGGACCATATTCTTCTCCAATCTGAGTTTTGCTCAAGTCTCGAATA
AACTCAAGGACATATTCAAAAAAATTCTGACCGTCGGTCGGGATGGTTTGTGGATTCCGAACAGCTATGACAACTGAACC
TAGCAAGATAGTAATTACGACCCAAGAAGTGATGAGTACTTGGGCATGAATTTGGAAACCTCCTATTTGCCAATAGAAGT
GTTGGCCTACTTCTACACCCGATATATCGTATAACCCCTTGAGTGTTTTAATGGAACAAGGTATAATATTCATATTGTCC
TCTGATAAAAACTGAACTTCAAAAAAGGAATTCTTTTGATTCAACCATCTCTTTCTCAACTCAGCAACTTGAAGTATTAA
TCTTATATTTAGGATACCAAGAAAGCACATCAGATCATAATATATATCAATACCCTCTAATATATATCAATATTCCCCTT
CTTTTTTCTATG---------------C------------------AAAAAAAATTCTATGCAA-AAAAAAAGATATAGT
AAAGTAAGTGATTCCATAAATTTACGCAGTTGCCCAAGAATTCACTATATATTCTTAATCAACGATTTCTTATATAGAGA
GAACGGCCCTCACAAATTGAAAATACTAATTTGTTAAGAATCAATCGAATTGAAGTCATAGTGTCATCGTTGGCTGGAAT
CGATATATTCGCGAGATCCGGGTCACAATTTGTATCGACTAAAGAAATAGTAGGAATCCCCAAAATGGCACATTCCCGAA
GAGCTATATACTCTTTTTGCTGATCAAGGACGATCACAATGTCTGGCAATCTCGTCATATATTTGATCCCGCCGA-
>chr5D_1
TATTGATATAATTGGAATTGCGGAAGCAAATACCAATTGACT--AAAAAAAGAAAAAAGTATCTAATCGAAATCGAAAGA
A--T--TTTTTTAAGATTAAACAAAAGGGTTCGCAAATAAAAGCGTTAGTGCCACAACTAGTCCATAAATTGTTAAAGCT
TCCATAAAAGCTAGACTAAGCAATAAAGTACCTCGTATTTTACCTTCTGCTT----CTGGCTCGCAATACCTTCTACAGC
TTGTCCTGCAGCAGTACCTTGACCAACTCCAGGTCCAATAGAAGCAAGCCCTACGGCCAATCCAGCAGCAATAACAGAAG
CAGCAGCAATTAGTGGATTCATGGTGAGTAGTTCCTCGTGTCAAAAAAAAGAAATGGTTAAGGATACAATCAACCAATAA
ATTCTTACTTCTAAGCTCTATTGGGGAGAATTAAAGTAACTAAAAAGTACAAATTGAAATCAAATTGAAATGATAATGTG
AATTGTCCGAACTACATAGAAGGGAATTCCATATCCATATATCGGATTAGATAATGAATCTAACCAAGGAATATATAATA
TAATATCCTATA------T--A--TATATACATTTGTTTCTTCTATTTTGTTTGCATATTTTCTCATTTTCTATTGAATC
GGATTCTAAAATCATTGCTTAAAGTGGAAACCTGCATAAAAGAGGACTCCAATTATAGACATTAAGGATATTATAGTATA
GATCTAGCCTGACTCCACCCTCCTTATTGCATATATACTTTGAAAATTCCATAATATAGTCTATTCTATTATCTCTCCTA
CAACTCTAGGCTATATATTCATACGCATTTCTAACTATTTTTTTGCAACCAAGCAGATTATCTGGAACCATGCATGAATT
GAGCTAAGCTGCAA--AAAAAA----TACTATTTCCAAAAAGAGTCAATCCAATGATAACCCTCCATGGATTCACCTATA
TAGTCTGCGGCTAATGTTGCAAAAATAAGAGCTTGAATACCGCTTGTAAATAATCCAAGAAACATGACCGGTATAGGGAT
TACTAAGGGGACTAAAGAAACAAGAACAACAACGACTAATTCATCCGCCAATATATTCCCGAAAAGTCGAAAGCTAAGCG
ATAATGGTTTTGTGAAATCTTCTAGAATGTTAATTGGTAAAAGGATTGGAGTTGGGTTAATATATTTCTCGAAATAGCTC
AATCCTTTTTTGCTAAGATCAGCATAAAAATATGCCGCTGATGTGAGTAAAGCTAAAGCAACAGTAGTATTTATATCATT
CGTGGGCGCTGCTAATTCCCCATGGGGTAACTCTATAATTTTCCAAGGTAAAAGAGCACCCGACCAATTCAAAACAAAAA
TAAAAAGGAACATAGTTCCAATAAAGGGAACCCAGGGACCATATTCTTCTCCAATCTGAGTTTTGCTCAAGTCTCGAATA
AACTCAAGGACATATTCAAAAAAATTCTGACCGTCGGTCGGTATGGTTTGTGGATTCCGAACAGCTATGACAACTGAATC
TAGCAAGATAGTAATTACGACCCAAGAAGTGATGAGTACTTGGGCAAGAATTTGGAAACCTCCTATTTGCCAATAGAAGT
GTTGGCCTACTTCTACACCCGATATATCGTATAACCCCTTGAGTGTTTTAATGGAACAAGGTATAATATTCATATTGTCC
TCTGATAAAAATTGAACTTCAAAAAAGGAATTCTTTTGATTCAACCATCTCTTTCTCAACTCAGCAACTTGAAGTATTAA
TCTTATATTTAGGATACCAAGAAAGCACATCAGATCATAATATATATCAATACCCTCTAATATATATCAATATTCCCCTT
CTTTTTTCTATG---------------CAAAAAAAATTCTATGC-AAAAA------------------AAAAGATATAGT
AAAGTAAGTGATTCCATAAATTTACGCAGTTGCCCAAGAATTCACTATATATTCTTAATCAACGATTTCTTATATAGAGA
GAACGGCCCTCACAAATTGAAAATACTAATTTGTTAAGAATCAATCGAATTGAAGTCATAGTGTCATCGTTGGCTGGAAT
CGATATATTCGCGAGATCCGGGTCACAATTTGTATCGACTAAAGAAATAGTAGGAATCCCCAAAATGGCACATTCCCGGA
GAGCTATATACTCTTTTTGCTGATCAAGGACGATCACAATGTCTGGCAATCTCGTCATATATTTGATCCCGCCGAG
>chr5D_1
TATTGATATAATTGGAATTGTGGAAGCAAATACCAATTTACT--AAAAAAAGAAAAAAGTATCTAATCGAAATCGAAAGA
A--T--TTTTTTAAGATTAAACAAAAGGGTTCGCAAATAAAAGCGCTAGTGCCACAACTAGTCCATAAATTGTTAAAGCT
TCCATAAAAGCTAGACTAAGCAATAAAGTACCTCGTATTTTACCTTCTGCTTCTGGCTGTCTCGCAATACCTTCTACAGC
TTGTCCTGCAGTAGTACCTTGACCAACTCCAGGTCCAATAGAAGCAAGCCCTACGGCCAATCCAGCAGCAATAACAGAAG
CAGCAGCAATTAGTGGATTCATGGTGAGTAGTTCCTCGTGTCAAAAAAAAGAAATGGTTAAGGATACAATCAACCAATAA
ATTCTTACTTCTAAGCTCTATTGGGGAGAAGTAAAGTAACTAAAAAGTACAAATTGAAATCAAATTGAAATGATAATGTG
AATTGTCCGAACTACATAGAAGGGAATTCCATATCCATATATCGGATTAGATAATGAATCTAACCTAGGAATATATAATA
TAATATCCTATATATATAT--A--TATATACATTTGTTTCTTCTATTTTGTTTGCATATTTTCTCATTTTCTATTGAATC
GGATTCTAAAATCATTGCTTAAGGTGGAAACCTGCATAAAAGAGGACTCCACTTATAGACATTAAGGATATTATAGTATA
GATCTAGCCTGACTCCACCCTCCTTAATGCATATATACTTTGAAAATTCCATAATATAGTCTATTCTATTCTCTCTCCTA
CAACTCTAGGCTATATATTCATACGCATTTCTAACTATTTTTTTGCAACCAAGCAGATTATCTGGAACCATGCATGAATT
GAGCTAAGCTGCAA--AAAAAT----TACTATTTCCAAAAAGAGTCAATTCAATGATGACCCTCCATGGATTCACCTATA
TAGGCTGCGGCTAATGTTGCAAAAATAAGAGCTTGAATACCGCTTGTAAATAATCCAAGAAACATGACCGGTATAGGGAT
TACTAAGGGGACTAAAGAAACAAGAACAACAACGACTAATTCATCCGCCAATATATTCCCGAAAAGTCAAAAGCTAAGCG
ATAATGGTTTTGTGAAATCTTCTAGGATGTTAATTGGTAAAAGGATTGGAGTTGGTTTAATATATTTCTCGAAATAGCTC
AATCCTTTTTTGCTAAGACCAGCATAAAAATATGCCACTGACGTGAGTAAAGCTAAAGCAACAGTAGTATTTATATCATT
CGTGGGCGCTGCTAATTCCCCATGGGGTAACTCTATAATTTTCCAAGGTAAAAGAGCACCCGACCAATTCGAAACAAAAA
TAAAAAGGAACATAGTTCCAATAAAGGGAACCCAGGGACCATATTCTTCTCCAATCTGAGTTTTGCTCAAGTCTCGAATA
AACTCAAGGACATATTCAAAAAAATTCTGACCATCGGTCGGGATGGTTTGTGGATTCCGAACAGCTATGACAACTGAACC
TAGCAAGATAGTAATTACGACCCAAGAAGTGATGAGTACTTGGGCATGAATTTGGAAACCTCCTATTTGCCAATAGAAGT
GTTGGCCTACTTCTACACCCGATATATCATATAACCCCTTGAGTGTTTTAATGGAACAAGGTATAATATTCATATTGTCC
TCTGATAAAAATTGAACTTCAAAAAAGGAATTCTTTTGATTCAACCATCTCTTTCTCAACTCAGCAACTTGAAGTATTAA
TCTTATATTTAGGATACCAAGAAAGCACATCAGATCATAATATATATCAATACCCTCTAATATATATCAATATTCCCCTT
CTTTTTTCTATG---------------C------------------AAAA------------------AAAAGATATAGT
AAAGTAAGTGATTCCATAAATTTACGCAGTTGCCCAAGAATTCACTATATATTCTTAATCAACGATTTCTTATATAGAGA
GAACGGCCCTCACAAATTGAAAATACTAATTTGTTAAGAATCAATCGAATTGAAGGCATAGTGTCATCGTTGGCTGGAAT
CGATATATTCGCGAGATCCGGGTCACAATTTGTATCGACTAAAGAAATAGCAGGAATCCCCAAAATGGCACATTCCCGAA
GAGCTATATACTCTTTTTGCTGATCAAGGACGATCACAATGTCTGGCAATCTCGTCATATATTTGATCTCGCCGAG
>chr1B_1
TATTGATATAATTGGAATTGCGGAAGCAAATACCAATTTACT--AAAAAAAGAAAAAAGTATCTAATCGAAATCGAAAGA
A--T-TTTTTTTAAGATTAAACAAAAGGGTTCGCAAATAAAAGCGCTAGTGCCACAACTAGTCCATAAATTGTTAAAGCT
TCCATAAAAGCTAGACTAAGCAATAAAGTACCTCGTATTTTACCTTCTGCTTCTGGCTCTCTCGCAATACCTTCTACAGC
TTGTCCTGCAGCAGTACCTTGACCAACTCCAGGTCCAATAGAAGCAAGCCCTACGGCCAATCCAGCAGCAATAACAGAAG
CATCAGCAATTAGTGGATTCATGGTGAGTAGTTCCTCGTGTCAAAAAAAAGAAATGGTTAAGGATACAATCAACCAATAA
ATTCTTACTTCTAAGCTCTATTGGGGAGAAGTAAAGTAACTAAAAAGTACAAATTGAAATCAAATTGAAATGATAATGTG
AATTGTCTGAACTACATAGAAGGGAATTCCATATCCATATATCGGATTAGATAATGAAACTAACCTAGGAATATATAATA
TAATATCC----------T--A--TATATACATTTGTTTCTTCTATTTTGTTTGCATATTTTCTCATTTTCTATTGAATC
GGATTCTAAAATCATTGCTTAAAGTGGAAACCCGCATAAAAAAGGACTCCACTTATAGACATTAAGGATATTATAGTATA
GATCTAGCCTGACTCCACCCTCCTTAATGCATATATACTTTGAAAATTCCATAATATAGTCTATTCTATTCTCTCTCCTA
CAACTCTAGGCTATATATTCATACGCATTTCTAACTATTTTTTTGCAACCAAGCAGATTATCCGGAACCATGCATGAATT
GAGCTAAGCTGCAA--AAAAAA----TACTATTTCCAAAAATAGTCAATTCAATGATGACCCTCCATGGATTCACCTATA
TAGGCTGCGACTAATGTTGCAAAAATAAGAGCTTGAATACCGCTTGTAAATAATCCAAGAAACATGACCGGTATAGGGAT
TACTAAGGGGACTAAAGAAACAAGAACAACAACGACTAATTCATCCGCCAATATATTCCCAAAAAGTCGAAAGCTAAGTG
ATAATGGTTTTGTGAAATCTTCTAGGATGTTAATTGGTAAAAGGATTGGAGTTGGTTTAATATATTTCTCGAAATAGCTC
AATCCTTTTTGG-TAAGACCAGCATAAAAATATGCCACTGACGTGAGTAAAGCTAAAGCAACAGTAGTATTTATATCATT
CGTGGGCGCTGCTAATTCCCCATGGGGTAACTCTATAATTTTCCAAGGTAAAAGAGCACCCGACCAATTCGAAACAAAAA
TAAAAAGGAACATAGTTCCAATAAAGGGAACCCAGAGACCATATTCTTCTCCAATCTGAGTTTTGCTCAAGTCTCGAATA
AACTCAAGGACATATTCAAAAAAATTCTGACCGTCGGTCGGGATGGTTTGTGGATTCCGAACAGCTATGACAACTGAACC
TAGCAAGATAGTAATTACGACCCAAGAAGTGATGAGTACTTGGGCATGAATTTGGAAACCTCCTATTTGCCAATAGAAGT
GTTGGCCTACTTCTACACCCGATATATCGTATAACCCCTTGAGTGTTTTAATGGAACAAGGTATAATATTCATATTGTCC
TCTGATAAAAATTGAACTTCAAAAAAGGAATTCTTTTGATTCAACCATCTCTTTCTCAACTCAGCAACTTGAAGTATTAA
TCTTATATTTAGGATACCAAGAAAGCACATCAGATCATAATATATATCAATACCCTCTAATATATATCAATATTCCCCTT
CTTTTTTCTATG---------------CAAAAAAAATTCTATGT---AAA------------------AAAAGATATAGT
AAAGTAAGTGATTCCATAAATTTACGCAATTGCCCAAGAATTCACTATATATTCTTAATCAACGAGTTCTTATATAGAGA
GAACGGCCCTCACAAATTGAAAATACTAATTTGTTAAGAATCAATCGAATTGAAGTCATAGTGTCATCGTTGGCTGGAAT
CGATATATTCGCGAGATCCGGGTCACAATTTGTATCGACTAAAGAAATAGTAGGAATCCCCAAAATGGCACATTCCCGAA
GAGCTATATACTCTTTTTGCTGATCAAGGACGATCACAATGTCTGGCAATCTCGTCATATATTTGATCCCGCCGAG
>chr3B_1
TATTGATATAATTGGAATTGCGGAAGCAAATACCAATTTACT--AAAAAAAGAAAAAAGTATCTAATCGAAATCGAAAGA
A--TTTTTTTTTAAGATTAAACAAAAGGGTTCGCAAATAAAAGCGCTAGTGCCACAACTAGTCCATAAATTGTTAAAGCT
TCCATAAAAGCTAGACTAAGCAATAAAGTACCTCGTATTTTACCTTCTGCTTCTGGCTGTCTCGCAATACCTTCTACAGC
TTGTCCTGCAGCAGTACCTTGACCAACTCCAGGTCCAATAGAAGAAAGCCCTACGGCCAATCCAGCAGCAATAACAGAAG
CAGCAGCAATTAGTGGATTCATGGTGAGTAGTTCCTCGTGTCAAAAAAAAGAAATGGTTAAGGATACAATCAACCAATAA
ATTCTTACTTCTAAGCTCTATTGGGGAGAAGTAAAGTAACTAAAAAGTACAAATTGAAATCAAATTGAAATGATAATGTG
AATTGTCCGAACTACATAGAAGGGAATTCCATATCCATATATCGGATTAGATAATGAATCTAACCTAGGAATATATAATA
TAATATCC----------T--A--TATATACATTTGTTTCTTCTATTTTGTTTGCATATTTTCTCATTTTCTATTGAATC
GGATTCTAAAATCATTGCTTAAAGTGGAAACCCGCATAAAAGAGGACTCCACTTATAGACATTAAGGATATTATAGTATA
GATCTAGCCTGACTCCACCCTCCTTAATGCATATATACTTTGAAAATTCCATAATATAGTCTATTCTATTCTCTCTCCTA
CAACTCTAGGCTATATATTCATACGCATTTCTAACTATTTTTTTGCAACCAAGCAGATTATCCGGAACCATGCATGAATT
GAGCTAAGCTGCAA--AAAAAAA---TACTATTTCCAAAAATAGTCAATTCAATGATGACCCTCCATGGATTCACCTATA
TAGGCTGCGGCTAATGTTGCAAAAATAAGAGCTTGAATACCGCTTGTAAATAATCCAAGAAACATGACCGGTATAGGGAT
TACTAAGGGGACTAAAGAAACAAGAACAACAACGACTAATTCATCCGCCAATATATTCCCGAAAAGTCGAAAGCTAAGTG
ATAATGGTTTTGTGAAATCTTCTAGGATGTTAATTGGTAAAAGGATTGGAGTTGGTTTAATATATTTCTCGAAATAGCTC
AATCCTTTTTTGCTAAGACCAGCATAAAAATATGCCGCTGACGTGAGTAAAGCTAAAGCAACAGTAGTATTTATATCATT
CGTGGGCGCTGCTAATTCCCCATGGGGTAACTCTATAAATTTCCAAGGTAAAAGAGCACCCGACCAATTCGAAACAAAAA
TAAAAAGGAACATAGTTCCAATAAAGGGAACCCAGGGACCATATTCTTCTCCAATCTGAGTTTTGCTCAAGTCTCGAATA
AACTCAAGGACATATTCAAAAAAATTCTGACCGTCGGTCGGGATGGTTTGTGGATTCCGAACAGCTATGACAACTGAACC
TAGCAAGATAGTAATTACGACCCAAGAAGTGATGAGTACTTGGGCATGAATTTGGAAACCTCCTATTTGCCAATAGAAGT
GTTGGCCTACTTCTACACCCGATATATCGTATAACCCCTTGAGTGTTTTAATGGAACAAGGTATAATATTCATATTGTCC
TCTGATAAAAACTGAACTTCAAAAAAGGAATTCTTTTGATTCAACCATCTCTTTCTCAACTCAGCAACTTGAAGTATTAA
TCTTATATTTAGGATACCAAGAAAGCACATCAGATCATAATATATATCAATACCCTCTAATATATATCAATATTCCCCTT
CTTTTTTCTATG---------------CAAAAAAAATTCTATGC-AAAAA------------------AAAAGATATAGT
AAAGTAAGTGATTCCATAAATTTACGCAGTTGCCCAAGAATTCACTATATATTCTTAATCAACGATTTCTTATATAGAGA
GAACGGCCCTCACAAATTGAAAATACTAATTTGTTAAGAATCAATCGAATTGAAGTCATAGTGTCATCGTTGGCTGGAAT
CGATATATTCGCGAGATCCGGGTCACAATTTGTATCGACTAAAGAAATAGTAGGAATCCCCAAAATGGCACATTCCCGAA
GAGCTATATACTCT--------------------------------------------------------------
>chr7B_1
TATTGATATAATTGGAATTGCGGAAGCAAATACCAATTTACT--AAAAAAAGAAAAAAGTATCTAATCGAAATCGAAAGA
A--T-TTTTTTTAAGATTAAACAAAAGGGTTCACAAATAAAAGCGCTAGTGCCACAACTAGTCCATAAATTGTTAAAGCT
TCCATAAAAGCTAGACTAAGCAATAAAGTACCTCGTATTTTACCTTCTGCTTCTGGCTGTCTCACAATACCTTCTACAGC
TTGTCCTGCAGCAGTACCTTGACCAACTCCAGGTCCAATAGAAGCAAGCCCTACGGCCAATCCAGCAGCAATAACAGAAG
CAGCAGCAATTAGTGGATTCATGGTGAGTAGTTCCTCGTGTCAAAAAAAAGAAATGGTTAAGGATACAATCAACCAATAA
ATTCTTACTTCTAAGCTCTATTGGGGAGAAGTAAAGTAACTAAAAAGTACAAATTGAAATCAAATTGAAATGATAATGTG
AATTGTCCGAACTACATAGAAGGGAATTCCATATCCATATATCGGATTAGATAATGAATCTAACCTAGGAATATATATTA
TAATATCC----------T--A--TATATACATTTGTTTCTTCTATTTTGTTTGCATATTTTCTCATTTTCTATTGAATT
GGATTCTAAAATCATTGCTTAAAGTGGAAACCCGCATAAAAGAGGACTCCACTTATAGACATTAAGGATATTATAGTATA
GATCTAGCCTGACTCCACCCTCCTTAATGCATATATACTTTGAAAATTCCATAATATTGTCTATTCTATTCTCTCTCCTA
CAACTCTAGGCTATATATTCATACGCATTTCTAACTATTTTTTTGCAACCAAGCAGATTATCCGGAACCATGCATGAATT
GAGCTAAGCTGCAA--AAAA--A---TACTATTTCCAAAAATAGTCAATTCAATGATGACCGTCCATGGATTCACCTATA
TAGGCTGCGGCTAATGTTGCAAAAATAAGAGCTTGAATACCGCTTGTAAATAATCCAAGAAACATGACCGGTATAGGGAT
TACTAAGGGGACTAAAGAAACAAGAACAACAACGACTAATTCATCCGCCAATATATTCCCGAAAAGTCGAAAGCTAAGTG
ACAATGGTTTTGTGAAATCTTCTAGGATGTTAATTGGTAAAAGGATTGGAGTTGGTTTAATATATTTCTCGAAATAGCTC
AATCCTTTTTTGCTAAGACCAGCATAAAAATATGCCGCTGACGTGAGTAAAGCTAAAGCAACAGTAGCATTTATATCATT
CGTGGGCGCTGCTAATTCCCCATGGGGTAACTCTATAATTTTCCAAGGTAAAAGAGCACCCGACCAATTCGAAACAAAAA
TAAAAAGGAACATAGTTCCAATAAAGGGAACCCAGGGACCATATTCTTCTCCAATCTAAGTTTTGCTCAAGTCTCGAATA
AACTCAAGGACATATTCAAAAAAATTCTGACCGTCGGTCGGGATGGTTTGTGGATTCCGAACAGCTATGACAACTGAACC
TAGCAAGATAGTAATTACGACCCAAGAAGTGATGAGTACTTGGGCATGAATCTGGAAACCTCCTATTTGCCAATAGAAGT
GTTGGCCTACTTCTACACCCGATATATCGTATAACCCCTTGAGTGTTTTAATGGAACAAGGTATAATATTCATATTGTCC
TCTGATAAAAATTGAACTTCAAAAAAGGAATTCTTTTGATTCAACCATCTCTTTCTCAACTCAGCAACTTGAAGTATTAA
TCTTATATTTAGGATACCAAGAAAGCACATCAGATCATAATATATATCAATACCCTCTAATATATATTAATATTCCCCTT
CTTTTTTCTATGCAAAAAAATTCTATGC------------------AAAA------------------AAAAGATATAGT
AAAGTAAGTGATTCCATAAATTTACGCAGTTGCCCAAGAATTCACTATATATTCTTAATCAACAATTTCTTATATAGAGA
GAATGGCCCTCACAAATTGAAAATACTAATTTGTTAAGAATCAATCGAATTGAAGTCATAGTGTCATCGTTGGCTGGAAT
CGATATATTCGCGA------------------------------------------------------------------
----------------------------------------------------------------------------
>chr1A_169
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------GACTAAGCAATAAAGTACCTCGTATTTTACCTTCTGCTTCTGGCTGTCTCGCAATACCTTCTACAGC
TTGTCCTGCAGTAGTACCTTGACCAACTCCAGGTCCAATAGAAGCAAGGCTTACGGCCAATCCAGCAGCAATAACAGAAG
CAGCAGCAATTAGTGGATTCATGGTGAGTAGTTCCTCGTGTCAAAAAAAAGAAATGGTTAAGGATACAATCAACCAATAA
ATTCTTACTTCTAAGCTCTATTGGGGAGAAGTAAAGTAACTAAAAAGTACAAATTGAAATCAAATTGAAATGATAATGTG
AATTGTCTGAACTACATAGAAGGGAATTCCATATCCATATATCGGATTAGATAATGAATCTAACCTAGGAATATATAATA
TAATATCC----------T--A--TATATACATTTGTTTCTTCTATTTTGTTTGCATATTTTCTCATTTTCTATTGAATC
GGATTCTAAAATCATTGCTTAAAGTGGAAACCCGCATAAAAGAGGACTCCACTTATAGACATTAAGGATATTATAGTATA
GATCTAGCCTGACTCCACCCTCCTTAATGCATATATACTTTGAAAATTCCATAATATAGTCTATTCTATTCTCTCTCCTA
CAACTCTAGGCTATATATTCATACGCATTTCTAACTATTTTTTTGCAACCAAGAAGATTATCCGGAACCATGCATGAATT
GAGCTAAGCTGCAAAAAAAA--A---TATTATTTCCAAAAATAGTCAATTCAATGATGACCCTCCATGGATTCACCTATA
TAGGCTGCGACTAATGTTGCAAAAATAAGAGCTTGAATACCACTTGTAAATAATCCAAGAAACATGACCGGTATAGGGAT
TACTAAGGGGACTAAAGAAACAAGAACAACAACGACTAATTCATCCGCCAATATATTCCCGAAAAGTCGAAAGCTAAGTG
ATAATGGTTTTGTGAAATCTTCTAGGATGTTAATTGGTAAAAGGATTGGAGTTGGTTTAATATATTTCTCGAAATAGCTG
AATCCTTTTTTGCTAAGACCAGCATAAAAATATGCCGCTGACGTGAGTAAAGCTAAAGCAACAGTAGTATTTATATCATT
CGTGGGCGCTGCTAATTCCCCATGGGGTAACTCTATAATTTTCCAAGGTAAAAGAGCACCCGACCAATTCGAAACAAAAA
TAAAAAGGAACATAGTTCCAATAAAGGGAACCCAGGGACCATATTCTTCTCCAATCTGAGTTTTGTTCAAGTCTCGAATA
AACTCAAGGACATATTCAAAAAAATTCTGACCGTCGGTCGGGATGGTTTGTGGATTCCGAACAGCTATGACAACTGAACC
TAGCAAGATAGTAATTACGACCCAAGAAGTGATGAGTACTTGGGCATGAATTTGGAAACCTCCTATTTGCCAATAGAAGT
GTTGGCCTACTTCTACACCCGATATATCGTATAACCCCTTGAGTGTTTTAATGGAACAAGGTATAATATTCATATTGTCC
TCTGATAAAAATTGAACTTCAAAAAAGGAATTCTTTTGATTCAACCATCTCTTTCTCAACTCAGCAACTTGAAGTATTAA
TCTTATATTTAGGAAACCAAGAAAGCACATCAGATCATAATATATATCAATACCCTCTAATATATATCAATATTCCCCTT
CTTTTTTCTATG---------------CAAAAAAAATTCTATGCAAAAAA------------------AAAAGATATAGT
AAAGTAAGTGATTCCATAAATTTACGCAGTTGCCCAAGAATTCACTATATATTCTTAATCAACGATTTCTTATATAGAGA
GAACGGCCCTCACAAATTGAAAATACTAATTTGTTAAGAATCAATCGAATTGAAGTCATAGTGTCATCGTTGGCTGGAAT
CGATATATTCGCGAGATCCGGGTCACAATTTGTATCGACTAAAGAAATAGTAGGAATCCCCAAAATGGCACATTCCCGAA
GAGCTATATACTCCTTTTGCTGATCAAGGACGATCACAATGTCTGGCAATCTCGTCATATATTTGATCCCGCCGAG
>SNPs
-------------S------------------------------------------------------S-----S-----
------------------------------------------------------S-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------S-----------------
------------------------------------S-------------------------------------------
-------------------------------------------------SS-----------------------------
---------------------S----------------------------------------------------------
-------------------SS-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----S--S------------------------------------------------------------------------
---------------------------------------------S----------------------------------
--------------------------------------------------------------------------------
------------------------------------------S---------S-------S-------------------
------S-----------------------------------------------------S-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------S------------------------------
--------------------------------------------------------S-----------------------
-S---------------S-------------------------------------------------S------------
--------------------------------------------------------------------------------
-------------------------------------------------------SSSSSS-------------------
--------------------------------------------------------------------------------
-------------------------------------S------------------------------------------
--------------------------------------------------------------------------------
--------------------------S--------------------------S----------------------
>forward_135
--------------------------------------------------------------------------------
--------------------------------GCAAATAAAAGCGCTAGTGCCAT-------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------------------
>reverse_2187
--------------------------------------------------------------------------------
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--------------------------TGGACGATCACAATGTCTGGC-----------------------------
