>input_sequence_87234
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---------------------------------------------------ATGCCTAATATACTTAGTTTAACTTGTAT
CTATTTTAATTCTGTTCTTTATCCTACTAG-TTTTTTCTTTGCCAAATTACCCGAAGCTTATGCTATTTTAAATCCAATC
GTGGATACTATGCCTGTTATACCTCTATTCTTTTTT-CTATTAGCCTTTGTTTGGCAAGCTGCTATAAGTTTTTGA----
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>chr4A_1_TraesCS4A01G154300
TCCGCCAAGATCCAATTTATTTAAACGCATATTAAAATTCTATCATATGGATGAAACATAGTTTGAAAAAGACGGCTAAA
CATGTTTGCTTAAAACTTATTTATTCTTAAATTTCCACCCTCAACAGATGGCTCGAGATGATCAATCTTGAAGTGAGAAA
AGAAGGATGGACTCTTCCTCAATAAATAAACTATCAACCTCCAAAAGAGTTTAATTAATTTAATTACTAGAAATTAGAAT
TCTAGTAGTAATATATTTTTCAGTACC---AAAAAAATTAACTATAATAACTAAATAAACTATTCCAATGTAAAGATTAA
AAGTTTTTGGTAGTTATAGAATTCTCGTAC---TTCAACTCGAATACCAAAAGGAAG-AAAAAA-ATGACTAAGTGATTT
TATAGTAGAGGCATATCCTGAATGTGCTTGATAGATCCCATTTTTTCATGAAAATAAAGATAGTCAATTAGACTGGACTT
AAGACTTTATTATGTTTTCTGAGAAAGAATAAGATATCATTATTCTCTTTAATAAACTTTTGTCTCGTACGGAATACTAT
ATGATTTCACCGTTTGTTTCAACAGAAACAATCTGGGACAGAAGGATTCGAACCTCCGAGTAACGGGACG-AAACCCGCT
GCCTTACCACTTGGCCACGCCCCATTTCGGGTTTTATGCGACACTAATAAACACTAGTATGTTTATTTGTTATTCGTCAA
TACCATTTCAATTACCTAAAAAAGAAGGGATATTCTCTTGCTAGTATTCTACACATGCGGATACTATAGAGTT-AAAAAA
TGCATTGATCATTACATGGAATTCTATTAAGATATTATATGAAAGTCGAATTTATTCCACTCTCATTTGAGAGTGGGAAT
ACAAGGATGTATTTTGTGTTTGGGAAAGTCCGAAGAAAAAAGATTTTGAATCTGCCTTTTCCCTCTTTCCCTT-AAAAGA
ATAACTCAAGAAAAATCCAATTATTTACTCTACAAGAATGAAATGCTTGTTATGCCTAATATACTTAGTTTAACTTGTAT
CTATTTTAATTCTGTTCTTTATCCTACTAG-TTTTTTCTTTGCCAAATTACCCGAAGCTTATGCTATTTTAAATCCAATC
GTGGATACTATGCCTGTTATACCTCTATTCTTTTTT-CTATTAGCCTTTGTTTGGCAAGCTGCTATAAGTTTTTGATGAA
ATCTTTAGTACTCTGTATGCCAAATTGAATGATGTGTTCATTCCAAAAATATTT-AAAAA-TGGGTAAAAGCCGAGAAGT
TTTATATTTTTATATTATGAACCTTTGATTCTAAAATTTAAATTCTTCTACATTGAATGGGTAGCTATAGCAATAAATTT
GGATCAACCTTTCTACTCCCCTGCACCTAGGTTGAGCAGGTACCTAAAGGTACCTACACAATACCTAACCACCTAACCCT
ATTTTTGCTATTGATCAGAGTGCTTATTATAAAAGAATTCTTGCAATTTTTTT-CAAGAATTA-TTTTTTGCATTTGTAG
GTATAAAAAA-A-CCATCCTAGTGGATCCGTGTGGTAAGGAAAAACTGGTAATCTATTCCTT--AAAAAAATCTTGGAGA
TTATGTAATGCTTACTCTCAAACCTTTTCTTTATACAGTAATGATATTCTTTGTTTCACTCTTTATCTTTGGATTTTTAT
CTAATGACCTAGGACGGAGTCCTGGACGCGAGGAGTGAAAATTC--G-TTTTTTTTCTTATTGGATTTGTTTCGTACATC
TTCAAGAGGTAAGGGCCATACGCGGCGACCGCCACCCACCACCTGGCGTAGCCCCCCATCCTAGCGAGGACGGCGGGCTG
CGCGTCTGCATCGACATTCCAGGGCTCAACAGGGCCGCATCTCATGAGCCCTTCTGGCCTTCGCGCGTTGGTTGGTGTGA
GGGTCCACCTCACAGCTATGTTCGCATGCCATTTGGCTTGCCGAATGCGGCCTCACCTGCCAGTGCCACCTGCGAAGCAT
TCTGGTGGCTTAGGAGGCCATGCATCACGCTGTCCTGGCAGAGAAGGCGATGGTCTTCAAGGAACCACCCGAGCCCCCGG
AGCCTCCTGAGGCTCAGGGTTCTAGCGGCTCGTGAGGAGCGACTCTTCGGCACGCATCATCGGCTACTCCAACACCACTC
TGGCAACGTTATCAGGTGACCCTTTTCTGTTCATTCAGTTGGGTGCG
>chr4A_1
TCCGCCAAGATCCAATTTATTTAAACCCATAGTAAAATTCTATTATATGAATGAAACATAGTTTGAAAAAGACGACTAAA
GAAGTTTGCTTAAAACTTATTTATTCTTAAATTTCCACCCTCAACGGATGGCTCGAGATGATCAATCTTGAAGTGAGAAA
AGAAGGATTGACTCTTCCTCAATAAATAAACTATCAACCTCCAAAAAAATTTAATTAAATTAATTACTAGAAATTAGAAT
TCTAGTAGTAATATATTTTTTC-AGTACCAAAAACAATTAACTATAATAACTAAATAAACTATTCCAATGAAAAGATTGA
AAGTTTTTGGTAGTTATAGAATTCTCATACTTTTTCAACTCGAATACCAAAAGGAAG-AAAAAATATGACTAAGTGATTT
TATAGTAGAGGCATATCCTGAATGTGCTTGATAGATCCCATTTTTTCATGAAAATAAAGATAGTCAATTTGACTGGACTT
AAGACTTTATTATGTTTTCTGAGAAAGAATAAGATATCATTAGTCTTTTTAATAAACTTTT-TCTCGTATGGAATACTAT
ATGATTTCACCATTTGTTTCATCAGAAACAATCTGGGATGGAAGGATTCGAACATCCGAGTAACGGGACCAAAACCCGCT
GCCTTACCACTTGGCCACGCCCCATTTTGGGTTTTATGCGACACTAATAAACACTAGTATGTTTATTTATTATTCGTCAA
TACCATTTCAATTACATAAAAAAGGAGGGATATTCTCTTGCTAGTATTCTACACATGCGGATAATATAGAGTC--AAAAA
TGCATTGATCATTACATGGAATTTTATTAAGAGATTATATAGAAGTCAAATTTATTCCACTCTCATTTGAGAGTGCGAAT
ACAACGAGGTATTTTGTGTTTGGGAAAGTACAAAGAAAAAAGATTTTGAATCTGCCTTTTCCTTCTTTCCCTT-AAAA-A
ATAACTGAAGAAAAATCCAATTATTTACTCTACAAGAATGAAATGCTTGTTATGCCTAATATACTTAGTTTAACATGTAT
CTGTTTTAATTCTGTTCTTTATCCTACTAC-TTTTTTCTTTGCCAAATTACCCGAAGCTTATGCTATTTTCAATCCAATC
GTGGATATTATGCCTGTTATACCTCTATTCTTTTTT-CTATAAGCCTTTGTTTGGCAG-----------TTTTCCATGAA
ATCTTTAGTACTCTGTATGCTAAATTGAATGATGTGTTCATTCCAAAAAAATTT--AAAAATGGGTAAAAGCTGAGAAGT
TTTATATTTTTATATTATGAACCTTTGATTCTAAAATTTAATTTTTTCTGCATTGAATGGGTAGCTACAGCAATAAATTT
GGATCGGCCTTTCTACTCCCCTGCACCTAGGTTGAGCAGGTACCTAAAGGTACCTACACAATACCTAACCACCTAACCCT
ATTTTTGCTATTGATAAGAGTGCTTATTATAAAAGAATTCTTGCAATTTTTTT-CAAGAATTA-TTTTTTGCATTTTTAG
GTATAAAAAACCAG---CCTAGTGGATCCGTGTGGTAAGGAAAAACTGGTAATCTATTCCTT---AAAAAATCTTGCAGA
TTATGTAATGCTTACTCTCAAACTTTTTGTTTATACAATAGTGATATTCTTTGTTTCACTCTTTATATTTGGATTCTTAT
CTAATGACCCAGGACGGAATCCTGGACGCGAGGAGTAAAAATTTA-G--TTTTTTTCTTATTGGATTTGTTTCGTACATT
TT------------------------------------------------------------------------------
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>chr5D_1
TCCGCCAAGATCCAATTTATTTAAACCCATATTAAAATTCTATCATATGAATGAAACATAGTTTGAAAAAGACGACTAAA
CAAGTTTGCTTAAAACTTATTTATTCTTAAATTTCCACCCTCAACGGATGGCTCGAGATGATCAATCTTGAAGTGAGAAA
AGAAGGATTGACTCTTCCTCAATAAATAAACTATCAACCTCCAAAAAAGTTTAATTAATTTAATTACTAG-AATTAGAAT
TCTAGTAGTAATATATTTTTTC-AGTACCAAAAACAATTAACTATAATAACTAAATAAACTATTCCAATGAAAAGATTGA
AAGTTTTTGGTAGTTATAGAATTCTCGTACTTCTTCAACTCGAATACCAAAAGGAAG-AAAAAATATGACTAAGTGATTT
TATAGTAGAGGCATATCGTGAATGTGCTTGATAGATCCCATTTTTTCATGAAAATAAAGATAGTCAATTTGACTGGACTT
AAGACTTTATTATGTTTTCTGAGAAAGAATAAGATATCATTATTCTCTTTAATAAACTTTTGTCTCGTACGGTATACTAT
ATGATTTCACCGTTTGTTTCATCAGAAACAATCTGGGACGGAAGGATTCGAACCTCCGAGTAACGGCACCAAAACCCGCT
GCCTTACCACTTGGCCACGCCCCATTTCGGGTTTTATGCGACACTAATAAACACTAGTATGTTGATTTGTTATTCGTCAA
TACCATTTCAATTACATAAAAAAGGAGGGATATTCTCTTGCTAGTATTCTACACATGCGGATAATATAGAATC-AAAAAA
TGCATTGATCATTACATGGAATTCTATTAAGATATTATATGAAAGTCGAATTTATTCCACTCTCATTTGAGAGTGCAAAT
ACAAGGAGGTATTTTGTGTTTGGGAAATTCCGAAGAAAAAAGATTTTGAATCTGCCTTTTCCTTCTTTCCCTTAAAAA-A
ATAACTCAAGAAAAATCCAATTATTTACTCTACAAGAATGAAATGCTTGTTATGCCTAATATACTTAGTTTAACCTGTAT
CTATTTTAATTCTGTTCTTTATCCTACTAG-TCTTTTCTTTGCCAAATTACCCGAAGCTTATGCTATTTTCAATCCAATC
GTGGATATTATGCCTGTTATACCTCTATTCTTTTTT-CTATTAGCCTTTGTTTGGCAGGCTGCTGTAAGTTTTCGATGAA
ATCTTTAGTACTCTGTATGCCAAATTGAATGATGTGTTCATTCCAAAAAAATTT--AAAAATGGGTAAAAGCCGAGAAGT
TTTATATTTTTATATTATGAACCTTCGATTCTAAAATTTAAATTCTTCTACATTGAATGGGTAGCTACAGCAATAAATTT
GGATCAGCCTTTCTACTCCCCTGCACCTAGGTTGAGCAGGTACCTAAAGGTACCTACACAATACCTAACCACCTAACCCA
ATTTTTGCTATTGATAAGAGTGCTTATTATAAAAGAATTCTTGCAATTTTTTT-CAAGAATTTTTTTTTTGCATTTTTAG
GTATAAAAAA-AACCATCCTAGTGGATCCGTGTGGTAAGGAAAAACTGGTAATCTATTCCTTAAAAAAAAATCTTGGAGA
TTATGTAATGCTTACTCTCAAACTTTTTGTTTATACAGTAGTGATATTCTTTGTTTCACTCTTTATCTTTGGATTCTTAT
CTAATGACCCAGGACGGAATCCTGGACGCGAGGAGTAAAAATTCAGG--TTTTTTTCTTATTGGACTTGTTTCGTACAT-
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>chr5D_1
TCCGCCAAGATCCAATTTATTTAAACCCATATTAAAATTCTATCATATGAATGAAACATAGTTTGAAAAAGACGACTAA-
CAAGTTTGCGTAAAACTTATTTATTCTTAAATTTCCACCCTCAACGGATGGCTCGAGATGATCAATCTTGAAGTGAGAAA
AGAAGGATTGACTCTTCCTCAATAAATAAACTATCAACCTCCAAAAAAGTTTAATTAATTTAATTACTAG-AATTAGAAT
TCTAGTAGTAATATATTTTTCAGTACAA-AAAAACAATTAACTATAATAACTAAATAAACTATTCCAATGAAAAGAGTGA
AAGTTTTTGGTAGATA-AGAATTCTCGTACTTCTTCAACTCGAATACCAAAAGGAAGAAAAAAATATGACTAAGTGATTT
TATAGTAGAGGCATATCCTGAATGTGCTTGATAGATCCCAT-TTTTCATGAAAATAAAGATAGTCAATTTGACTGGACTT
AAGACTTTATTATGTTTTCTGAGAAAGAATAAGATATCATTATTCTCTTTAATACACTTTTGTCTCGTACGGAATACTAT
ATGATTTCACCGTTTGTTTCATCAGAAACAATCTGGGACGGAAGGATTCGAACCTCCGAGTAACGGGACCAAAACCCGCT
GCCTTACCACTTGGCCACGCCCCATTTCGGGTTTTATGCGACACTAATAAACACTAGTATGTTTATTTGTTATTCGTCAA
TACCATTTCAATTACATAAAAAAGGAGGGATATTCTCTTGCTAGTATTCTACACATGCGGATAATATAGAATCAAAAAAA
TGCATTGATCATTACATGGAATTCTATTAAGATATTATATGAAAGTCGAATTTATTCCACTCTCATTTGAGAGTGCAAAT
ACAAGGAGGTATTTTGTGTTTGGGAAAGTCCGAAGAAAAAAGATTTTGAATCTGCCTTTTCCTTCTTTCCCTTAAAAA-A
ATAACTCAAGAAAAAACCAATTATTTACTCTACAAGAATGAAATGCTTGTTATGCCTAATATACTTAGTTTAACATGTAT
CTGTTTTAATTCTGTTCTTTATCCTACTAG-TTTTTTCTTTGCCAAATTACCCGAAGCTTATGCTATTTTCAATCCAATC
ATGGATATTATGCCTGTTATACCTCTATTCTTTTTT-CTATTAGCCTTTGTTTGGCAAGCTGCTGTAAGTTTTCGATGAA
ATCTTTAGTACTCTGTATGCCAAATTGAATGATGTGTTCATTCCAAAAAAATTT--AAAA-TGGGTAAAAGCCGAGAAGT
TTTATATTTTTATATTATGAACCTTTGATTCTAAAATTTAAATTCTTCTACATTGAATGGGTAGCTACAGCAATAAATTT
GGATCAGCCTTTCTACTCCCCTGCACCTAGGTTGGGCAGGTACCTAAAGGTACCTACACAATACCTAACCACCTAACCCT
ATTTTTGCTATTGATAAGAGTGCTTATTATAAAAGAATTCTTGCAATTTTTTT-CAAGAATTC-TTTTTTGCATTTTTAG
GTATAAAAAA-AACCATCCTAGTGGATCCGTGTGGTAAGGAAAAACTGGTAATCTATTCCTTAAA-AAAAATCTTGGAGA
TTATGTAATGCTTACTCTCAAACTTTTTGTTTATACAGTAGTGATATTCTTTGTTTCACTCTTTATCTTTGGATTCTTAT
CTAATGACCCAGGACGGAATCCGGGACGCGAGGAGTAAAAATTCA-GTTTTTTTTTCTTATTGGATTTGTTTCGTACAT-
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>chr5D_1
TCTGCCAAGATCCAATTTATTTAAACCCATATTAAAATTCTATCATATGAATGAAACATAGTTTGAAAAAGACGACTAAA
CAAGTTTGCTTAAAACTTATTTATTCTTAAATTTCCACCCTCAACGGATGGCTCGAGATGATCTATCTTGAAGTGAGAAG
AGAAGGATTGACTCTTCCTCAATAAATAAACTATCAACCTCCAAAAAAGTTTAATTAATTTAATTACTAG-AATTAGAAT
TCTAGTAGTAATATATATTTTCTAGTACCAAAAACAATTAACTATAATAACTAAATAAACTATTCCAATGAAAAGATTGA
AAGTTTTTGGTAGTTATAGAATTCTCGTACTTCTTCAACTCGAATACCAAAAGGAAGAAAAAAATATGACTAAGTGATTT
TATAGTAGAGGCATATCCTGAATGTGCTTGATAGATCCCATTTTTTCATGAAAATAAAGATAGTCAATTTGACTGGACTT
AAGACTTTATTATGTTTTCTGAGAAAGAATAAGATATCATTATTCTCTTTAATAAACTTTTGTGTCGTACGGCATACTAT
ATGATTTCACCGTTTGTTTCATCAGAAACAATCTGGGACGGAAGGATTCGAACCTCCGAGTAACGGGACCAAAACCCGCT
GCCTTACCACTTGGCCACGCCCCATTTCGGGTTTTATGCGACACTAATAAACACTAGTATGTTTATTTGTTATTCGTTAA
TACCATTTCAATTACAT-AAAAAGGAGGGATATTCTCTTGCTAGTATTCTACACATGCGGATAATATAGAAT-AAAAAAA
TGCATTGATCATTACATGGAATTCTATTAAGATATTATATGAAAGTCGAATTTATTCCACTCTCATTTGAGAGTGCGAAT
ACAAGGAGGTATTTTGTGTTTGGGAAAGTCCGAAGAAAAAAGATTTGGAATATGCCTTTTCCTTCTTTCCCTTAAAAA-A
ATAACTCAAGAAAAATCCAATTATTTACTCTACAAGAATGAAATGCTTGTTATGCCTAATATACTTAGTTTAACCTGTAT
CTGTTTTAATTCTGTTCTTTACCCAACTAG-TTTTTT-TTTGCCAAATTACCCGAAGCTTATGCTATTTTCAATCCAATC
ATGGATATTATGCCTGTTATACCTCTATTCTTTTTT-CTATTAGCCTTTGTTTGGCAAGCTGCTGTAAGTTTTTGATGAA
ATCTTTAGTACTCTGTATGCCAAATTGAATGATGTGTTCATTCCAAAAAATTTA--AAAA-TGGGTAAAAGCCGAGAAGT
TATATATTTTTATATTATGAACCTTCGATTCTAAAATTTAAATTCTTCTACATTGAATGGGTAGCTACAGCAATAAATTT
GGATCAGCCTTTCTACTCCCCTGCACCTAGGTTGAGCAGGTACCTAAAGGTACCTACACAATACCTAACCACCTAACCCT
ATTTTTGCTATTGATAAGAGTGCTTATTATAAAAGAATTCTTGCAATTTTTTT-CAAGAATTA-TTTTTTGCATTTTTAG
GTAT-AAAAA-AACCATCCTAGTGGATCCGTGTGGTAAGGAAAAACTGGTAATCTATTCCTTAAA-AAAAATCTTGGAGA
TTATGTAATGCTTACTCTCAAACTTTTTGTTTCTACAGTAGTGATATTCTTTGTTTCACTCTTTATCTTTGGATTCTTAT
CTAATGACCCAGGACGGAATCCTGGACGCGAGGAGTAAAAATTTA-GTTTATTTTTCTTATTCGATTTGTTTCGTACAT-
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>chr5D_1
TCCGCCAAGATCCAATTTATTTAAACCCATATTAAAATTCTATCATATGAATGAAACATAGTTTGAAAAACATGACTAAA
CAAGTTTGCTTAGAACTTATTTATTCTTAAATTTCCACCCTCAACATATGGCTCGAGATGATCAATCTTGAAGTGAGAAG
AGAAGGATTGACTCTTCCTCAATAAATAAACTATCAACCTCCAAAAAAGTTTAATTAATTTAATTACTAT-AATTAGAAT
TCTCGTAGTAATATATTTTTTG-AGTACCAAAAACAATTAACTATAATAACAAAATAAACTATTCCAATGAAAAGATTGA
AAGTTTTTGGTAGTTATAGAATTCTCATACTTCTTCAACTCGAATACCAAAAGGAAGAAAAAAATATGACTAAGTGATTT
TATAGTAGAGGCATATCCTGAATGTGCTTGATAGATCCCACTTTTTCATGAAAATAAAGACAATCAATTTGACTGGACTT
AAGACCTTATTATGTTTTCTGAGAAAGAATAAGATATCATTATTCTCTTTAATAAACTTTTGTCTTGTACGGAATACTAT
ATGATTTCACCATTTGTTTCATTAGAAACAATCTGGGACGGAAGGATTCGAACCTCCGAGTAACGGGACCAAAACCCGCT
GCCTTACCACTTGGCCACGCCCCATTTCGGGTTTTATGTGACACTAATAAACACTAGTATGTTTATTTGTTATTCGTCAA
TACCATTTCAATTACATCAAAAAGGAGGGATATTCTCTTGCTAGTATTCTACACATGCAGATAATATAGAATCAAAAAAA
TGTGTTGATCATTACATGGAATTCTATTAAGATATTATATGAAAGTCGAATTTATTCCACTCTCATTTGAGAGTGCGAAT
ACACGGAGGTATTTTGTGTTTGGGAAAGTCCGAAGAAAAAAGATTTTGAATCTGCCTTTTCCTTCTTTCCCTTAAAAA-A
ATAACTCAAGAAAAATCCAATTATTTACTCTACAAGAATGAAATGCTTGTTATGCCCAATATACTTAGTTTAACCTGTAT
CTGTTTAAATTCTGTTCTTTATCCTACTAG-TTTTTTCTTTGCCAAATTACCCGAAGCTTATGCTATTTTCAATCCAATC
GTGGATATTATGCCTGTTATACCTCTATTCTTTTTTTCTAGTAGCCTTTGTTTGGCAAACTGCTGTAAGTTTTCGATGAA
ATCTTTAGTACTCTGTATGCCAAATTGAATGATGTGTTCATTCCAAAAAAATTA-AAAAA-TGGGTAAAAGTTGAGAAGT
TTTATATTTTTATATTATGAACCTTCGATTCTAAAATTTAAATTCTTCTACATTGAATGGGTAGCTACAGGAATACATTT
GGATAAGCCTTTCTACTCCCCTGCACCTAGGTTGAGTAGGTACCTAAAGGTACCTACATAATACCTAACCACCTAACCCT
ATTTTTGCTATTGATAAGAGTGCTTATTATAAAAGAATTCTTGCAATTTTTTT-CAAGAATTC-TTTTTTGCATTTTTAG
GTAT-AAAAAAAACCATCCTAGTGGACCCGTGTGGTAAGGAAAAACTGGTAATCTATTCCTTAAA-AA-AATCTTGGAGA
TTATGTAATGCCTACTCTCAAACTTTTTGTTTATACAGTAGTGATATTCTTTGTTTCACTCTTTATCTTTGGATTCTTAT
CTAATGACCCAGGACGGAATCCTGGACGCGAAGAGTAAAAATTTA-G--TTTTTTTCTTATTGGATTTGTTTCGTACAT-
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>chr6D_1
TCCACCAAGATCCAATTTATTTAAACCCATATTAAAATTCTATCATATGAATGAAACATCGTTTGAAAAAGACGACTAAA
CAAGTTTGCTTAAAACTTATTTATTCTTAAATTTCCACCCTCAACGGATGGCTCGAGATGATCAATCTTGAAGTGAGAAA
AGAAGGATTGACTCTTCCTCAATAAATAAACTATCAACCTCCAAAAAAGTTTAATTAATTTAATTACTAG-AATTAGAAT
TCTAGTAGTAATATATTTTTTAGTACC---AAAAACAATTAA------AAGTAAATAAACTATTCCAATGAAAAGATTGA
AAGTTTTTGGTAGTTATAGAATTCTTGTACTTCTTCAACTCGAATACCAAAAGGAAGAAAAAAATATGACTAAGTGATTT
TATAGTAGAGGCATATCCTGAATGTGCTTGATAGATCCCATTTTTTCATGAAAATAAAGATAGTCAATTTGACTGGACTT
AAGACTTTATTATGTTTTCTGAGAAAGAATAAGATATCATTATTCTCTTTAATAAACTTTTGTCTCGTACGGAATACTAT
ATGATTTCACCATTTGTTTCATCAGAAACAATCTGGGACGGAAGGATTCGAACCTCCGAGTAACGGGACCAAAACCCGCT
GCCTTACCACTTGATCACGCCCCATTTCGGGTTTTATGCGACACTAATAAACACTAATATGTTTATTTGTTATTCGTCAA
TACCATTTCAATTACATAAAAAAGGAGGGATATTCTCTTGCTAGTATTCTACACATGCGGATAATATAGAATCAAAAAAA
TGCATTGATCATTACATGGAATTCTATTAAGATATTATATGAAAGTCGAATTTATTCCACTCTCATTTGAGAGTGCGAAT
ACAAGGAGGTATTTTGTGTTTGGGAAAGTCCGAAGAAAAAAGATTTTGAATCTGCCTTTTCCTTCTTTCCCTTAAAAA-A
ATAACTCAAGAAAAATCCAATTATTTACTCTACAAGAATGAAATGCTTGTTATGCCTAATATACTTAGTTTAACCTGTAT
CTGTTTTAATTCTGTTCTTTATCCTACTAGTTTTTTTCTTTGCCAAATTACCCGAAGCTTATGCTATTTTCAATCCAATC
GTGGATATTATGCATGTTATACCTCTATTCTTTTTT-CTATTAGCCTTTGTTTGGCAAGCTGCTCTAAGTTTTCGATGAA
ATCTTTAGTACTCTGTATGCCAAATTGAATGATGTGTTCATTCCAAAAAAAATT-AAAAA-TGGGTAAAAGCCGAGAAGT
TTTATATTTTTATATTATGAACCTTTGATTCTAAAATTTAAATTCTTCTACATTGAATGGGTAGCTACAGCAATAAATTT
GGATCAGCCTTTCTACTCCCCTGCACCTAGGTTGAGCAGGTACCTAAAGGTACCTACACAATACCTAACCACCTAACCCT
ATTTTTGCTATTGATAAGAGTGCTTATTATAAAAGAATTCTTGCAA-TTTTTT-CAAGAATTC-TTTTTTGCATTTTTAG
GTAT-AAAAAAAACCATCCTAGTGGATCCGTGTGGTAAGGAAAAACTGGTAATCTATTCCTTAAA-AAAAATCTTGGAGA
TTATGTAATGCTTACTCTCAAACTTTTTGTTTATACAGTAGTGATATTCTTTGTTTCACTCTTTATCTTTGGATTCTTAT
CTAATGACCCAGGACGGAATCCTGGACGCGAGGAGTAAAAATTCA-G-TTTTTTTTCTTATTGGATTTGTTTCGTACAT-
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-----------------------------------------------
>chr1D_1
TCCGCGAAGATCCAATTTATTTAAACCCATATTAAAATTCTATCATATGAATTAAACATCGTTTGAAAAAGGCGACTAAA
CAAGTTTGCTTAAAACTTATTTATTCTTAAATTTCCACCCTCAACGGATGGCTCGAGATGATCAATCTTGAAGTGAGAAA
AGAAGGATTGACTCTTCGTCAATAAATAAACTATCAACCTCCAAAAAAGTTTAATTAATTTAATTACTAG-AATTAGAAT
TCTAGTAGTAATATATTTCTTC-AGTACCAAAAAAAATTAACTATAATAACTAAATAAACTATTCCAATGAAAAGATTGA
AAGTTTTTGGTAGTTATAGAATTCTCGTACTTCTTCAACTCGAATACCAAAAGGAAGAAAAAAATATGACTAAGTGATTT
TATAGT--AGGCATATCCTGAATGTGCTTGATAGATCCCATTTTTTCATGAAAATAAAGATAGTCAATTTGACTGCACTT
AAGACTTTATTATGTTTTCTGAGAAAGAATAAGATATCATTATTCTCTTTAATAAAATTTTGTCTCGTACGGAATACTAT
ATGATTTCACCATTTGTTTCATCAGAAACAATCTGGGACGGAAGGATTCGAACCTTCGAGTAACGGGACCAAAACCTGTT
GCCTTACCACTTGGCCACACCCCATTTTGGGTTTTATGCGACACTAATAAACACTAGTATGTTTATTTGTTATTCGTCAA
TACCATTTCAATTACATAAAAAAGGAGGGATATTCTCTTGCTAGTATTCTACACATGCGGATAATATAGAATCAAAAAAA
TGCATTGATCATTACATGGAATTCTATTAAGATATTATATGAAAGTCGAATTTATTCCACTCTCATTTTAGAGTGCGAAT
ACAAGGAGGTATTTTGTGTTTGGGAAAGTCCGAAGAAAAAAGATTTTGAATCCGCCTTTTCCTTCTTTCCCTT-AAAA-A
ATAACTCAAGAAAAATCCAATTATTTACTCTACAAGAATGAAATGCTTGTTATGCCTAATATACTTAGTTTAACCTGTAT
CTGTTTTAATTCTGTTCTTTATCCTACTAGTTTTT-TCTTTGCCAAATTACCCGAAGCTTATGCTATTTTCAATCCAATC
GTGGATATTATGCCTGTTATAGCTCTATTCTTTTTT-CTATTAGCCTTTGTTTGGCAAGCTGCTGTAAGTTTTCGATGAA
ATCTTTAGTACTCTCTATGCCAAATTGAATGATGTGTTCATTCCAAAAAAAATTTAAAAA-TGGGTAAAAGCCGAGAAGT
TTTATATTTTTATATTATGAACCTTCGATTCTAAAATTTAAATTCTTCTACATTGAATGGGTAGCTACAGTAATAAATTT
GGATCAGCCTTTCTACTCCCCAGCACCTAGGTTGAGCAGGTACCTAAAGGTACCTACACAATACCTAACCACCTAACCCT
ATTTTTGCTATTGATAAGAGTGCTTATTATAAAAGAATTCTTGCAA-TTTTTTTCAAGAATTA-TTTTTTGCATTTTTAG
GTAT--AAAAAAACCATCCTAGTGGATCCGTGTGGTAAGGAAAAACTGGTAATCTATTCCTT-AA-AAAAATCTTGGAGA
TTATGTAATGCTTACTCTCAAACTTTTTGTTTATACAGTAGTGATATTCTTTGTTTCACTCTTTATCTTTGGATTCTTAT
CTAATGACCCAGGACGGAATCCTGGACGCGAGGAGTAAAAATTCA-G-ATTTTTTTCTTATTGGATTTGTTTTGTACAT-
--------------------------------------------------------------------------------
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-----------------------------------------------
>chr1D_1
TCCGCCAAGATCCAATTTATTTAAACCCATATTAAAATTCTATCATATGAATGAAACATAGTTTGAAAAAGACGACTAAA
CAAGTTTGCTTAAAACTTATTTATTCTTAAATTTCCACCCTCAACGGATGGCTCGAGATGATCAATCTTGAAGTGAGAAA
AGAAGGATTGACTCTTCCTCAATAAATAAACTATCAACCTCCAAAAAAGTTTAATTAATTTAATTACTAG-AATTAGAAT
TCTAGTAGTAATATATTTTTTC-AGTACCAAAAACAATTAAATATAATAACTAAATAAACTATTCCAATGAAAAGATTGA
AAGTTTTTGGTAGTTATAGAATTCTCGTACTTCTTCAACTCGAATACCAAAAGGAAGAAAAAAATATGACTAAGTGATTT
TATAGTAGAGGCATATCATGAATGTGCTTGATAGATCCCATTTTTTCATGAAAATAAAGATAGTCAATTTGACTGGACTT
AAGACTTTATTATGTTTTCTGAGAAAGAATAAGATATCATTATTCTCTTTAATAAACTTTTGTTTCATACGGAATACTAT
ATGATTTCACCGTTTGTTTCATCAGAAACAATCTGGGACGGAAGGATTCGAACCTCCGAGTAACGGGACCAAAACCCGCT
GCCTTACCACTTGGCCACGCCCCATTTCGGGTTTTATGCGACACTAATAAACACTAGTATGTTTATTTGTTATTCGTCAA
TACCATTTCAATTACATAAAAAAGGAGGGATATTCTCTTGCTAGTATTCTACACATGCAGATAATATAGAATCAAAAAAA
TGCATTGATCATTACATGGAATTCTATTAAGATATTATATGAAAGTCGAATTTATTCCACTCTCATTTGAGAGTGCAAAT
ACAAGGAGGTATTTTGTGTTTGGGAAAGTCCGAAGAAAAAGGATTTTGAATCTGCCTTTTCCTTCTTTCCCTTAAAAA-A
ATAACTGAAGAAAAATCCAATTATTTACTCTACAAGAATGAAATGCTTGTTATGCCTAATATACTTAGTTTAACCTGTAT
CTATTTTAATTCTGTTCTTTATCCTACTAGTTTTT-TCTTTGCCAAATTACCCGAAGCTTATGCTATTTTCAATCCAATC
GTGGATATTATGCCTGTTATACCTCTATTCTTTTTT-CTATTAGCCTTTGTTTGGCAAGCTGCTGTAAGTTTTCGATGAA
ATCTTTAGTACTCTGTATGCCAAATTGAATGATGTGTTCATTCCAAAAAATTTA--AAAA-AGGGTAAAAGCCGAGAAGT
TTTATACTTTTATATTATGAACCTTCGATTCTAAAATTTAAATTCGTCTACATTGAATGGGTAGCTACAGCAATAAATTT
GGATCAGCCTTTCTACTCCCCTGCACCTAGGTTGAGCAGGTACCTA----------CACAATACCTAACCACCTAACCCT
ATTTTTGCTATTGATAAGAGTGCTTATTATAAAATAATTCTTGCAATTTTTTT-CAAGAATTC-TTTTTTGCATTTTTAG
GTAT-AAAAA-AACCATCCTAGTGGATCCGTGTGGTAAGGAAAAACTGGTAATCTATTCCTTAAA-AAAAATCTTGGAGA
TTATGTAATGCTTACTCTCAAACTTTTTGTTTATACAGTAGTGATATTCTTTGTTTCACTCTTTATCTTTGGATTCTTAT
CTAATGACCCAGGACGGAATCCTGGACGCGAGGAGTAAAAATTTA-GTTTTTTTTTCTTATTGGATTTGTTTCGTACAT-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------
>chr1D_1
TCCGCCAAGATCCAATTTATTTAAACCCATATTAAAATTCTATCATATGAATGAAACATAGTTTGAAAAAGATAACTAAA
CAAGTTTGCTTAAAACTTAATTATTCTTAAATTTTCACACGCAACGGATGGCTTGAGATGATCAATCTTGAAGTGGGAAG
AGAAGGATTGACTCTTCCTCAATAAATAAACTATCAACCTCCACAAAAGTTTAATTAATTTAATTACTAG-AATTAGAAT
TCTAGTAGTAATATATTTTTTC-AGTACCAAAAACAGTTAACTATAATAACTAAATAAACTATTCCAATGAAAAGATTGA
AAGTTTTTGGTAGTTATAGAGTTCTCATACTTCTTCAACTCGAATACCAAAAGGAAGAAAAAA-TATGACTAAGCGATTT
TATAGTAGAGGCATATCCTGAATGTGCTTGATAGATCCCATTTTTTCATGAAAATAAATATTGTCAATTTGACTGGACTT
AAGACTTTATTATGTTTTCTTAGAAAGAATAAGATATCATTATTCTCTTTAATAAACTTTTATCTCGTACGGAATACTAT
ATGATTTCACCGTTTGTTTCATCAGAAACAATCTGGGACGGAAGGATTCGAACCTCCGAGTAACGGTACCAAAACCCGCT
GCCTTACCACTTGGCCACGCCCCATTTTGGGTTTTATGCGACACTAATAAACACCAGTATGTTTATTTGTTTTTCGTCAA
TACCATTTCAATTACATAAAAAAGGAGGGATGTTCTCTTGCTAGTATTCTACACATGCGGATAATATAGAATCAAAAAAA
TGCATTGATCATTACATGTAATTCTATTAAGATATTATATGAAAGTCGAATTTATTCCACTCTCATTTGAGAGTGCGAAT
ACAAGGAGGTGTTTTGTGTTTGGGAAAGTCCGAAGAAAAAGGATTTCGAATATGTCTTTTCCTTCTTTCCCTTAAAAA-A
ATAACTCAAGAAAAGCCCAATTATTTACTCTACAAGAATGAAATGCTTGTTATGCCTAATATACTTAGTTTAACCTGTAT
CTGTTTTAATTTTGTTCTTTATCCTACTAGTTTTT-TCTTTGCCAAATTACCCGAAGCTTATGTTATTTTCAATCCAATC
ATGGATATTATGCCTGTTGTACCTCTATTATTTTTT-CTATTAGCCTTTGTTTGGCAAGCTGTTGTAAGTTTTCGATGAA
ATCTTTAGTACTCTATATGCCAAATTGAATGATGTGTTCATTCCAAAAAAATTA--AAAA-TTTGTAAAAGCCGAGAAGT
TTTATATTTTTATATTATGAACCTTCGATTCTAAAATTTAAATTCTTCTACATTGAATGGGTAGCTAAAGCAATAAATTT
GGATCAGCCTTTCTACTCCCATGCACCTAGGTTGAGCAGGTACCTAAAGGTACCTACACAATACCTAACCACCTAACCCT
ATATTTGCTATTGATAAGAGTGCTTATTATAAATTAATTCTTGCAAAAAAAAT-CCAGAATTC-TTTTTTGCATTTTTAG
GTAT-AAA-AAAACCATCCTAGTGGATCCGTGTGGTAAGGAAAAACTGGCAATCTATTCCTT-AA-AAAAAACTTGGAGA
TTATGTAATGCTTACTCTCAAACTTTTTGTTTATACAGTAGCGATATTCTTTGTTTCACTCTTTATCTTAGGATTCTTAT
CTAATGACCCAGGATGGAATCCTGGACGCGAGGAGTAAAAATTCAA--TTTTTTTTCTTATTGGATTTGTTTCGTACAT-
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>chr2A_1
TCCGCCAAGATCCAATTTATTTAAACCCATATTAAAATTCTATCATATGAATGAAACATAGTTTGAAAAAGACGACTAAA
CAAGTTTTCTTAAAACTTATTTATTCTTAAATTTCCACCCTCAACGGATGGCTCGAGATGATCAATCTTGAAGTGAGAAA
AGAAGGATTGACTCTTCCTCAATAAATAAACTATCAACCTCCAAAAAAGTTTAATTAATTTAATTACTAG-AATTAGAAT
TCTAGTAGTAATATATTTTTTC-AGTACCAAAAACAATTAACTATAATAACTAAATAAACTATTCCAATGAAAAGATTGA
AAGTTTTTGGTAGTTATAGAATTCTCGTACTTCTTCAACTCGAATACCAAAAGGAAGAAAAAAATATGACTAAGTGATTT
TATAGAAGAGGCATATCCTGAATGTGCTTGATAGATCACATTTTTTCATGAAAATGAAGATAGTCAATTTGACTGGACTT
AAGACTTTATTATGTTTTCTGAGAAAGAATAAGATATCATTATTCTCTTTAATAAACTTTTGTCTCGTATGGAATACTAT
ATGATTTCACCGTTTGTTTCATCAGAAACAATCTGGGACGGAAGGATTCGAACCTTCGAGTAACGGGACCAAAACCCGCT
GCCTTACCACTTGGCCACGCCCCATTTCGGGTTTTATGCGACACTAATAAACACTAGTATGTTTATTTGTTATTCGTCAA
TACCATTTCAATTAAAT-AAAAAGGAGGGATATTCTCTTGCTAGTATTCTACACATGCGGATAATATAGAATCAAAAAAA
TGCATTGATCATTACATGGAATTCTATTAAGATATTATATGAAAGTCGAATTTATTCCACTCTCATTTGAGAGTGCGAAT
ACAAGGAGGTATTTTGTGTTTGGGAAAGTCTGAAGAAAAAAGATTTTGAATCTGCCTTTTCCTTCTTTCCCTTAAAAA-A
ATAACTCAAGAAAAATCCAATTATTTACTCTACAAGAATGAAATGCTTGTTATGCCTAATATACTTAGTTTAACCTGTAT
CTGTTTTAATTCTGTTCTTTATCCTACTA-TTTTT-TCTTTGCCAAATTACCCGAAGCTTATGCTATTTTCAATCCAATC
GTGGATATTATGCCTGTTATACCTCTATTCTTTTTT-CTATTAGCCTTTGTTTGGCAAGTTGCTGTAAGTTTTCAAAGAA
ATCTTTAGTACTCTATATGCCAAATTGAATGATGTGTTCATTCCAAAAAAAATT--AAAA-TGGGTAAAAGCCGAGAAGT
TTTATATTTTTATATTATGAATCTTCGATTCTAAAATTTAAATTCTTCTACATTGAATGGGTAGCTACAACAATAAATTT
GGATCAGCCTTTCTACTCCCCTGCACCTAGGTTGAGCAGGTACCTAAAGGTACCTACACAATACCTAACCACCTAACCCT
ATTTTTGCTATTGATAAGAGTGCTTATTATAAAAGAATTCTTGCAACTTTTTT-CAAGAATTC-TTTTTTGCATTTTTAG
GTAT-AAAAAAT--CATCCTAGTGGATCCGTGTGGTAAGGAAAAACTGGTAATCTATTCCTT-AA-AAAAATCTTGGAGA
TTATGTAATGCTTACTCTCAAACTTTTTGTTTATACAGTAGTGATATTCTTT----------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------
>SNPs
--------------------------S----------------------S------------------------S-----
--S-----------------------------------------------------------------------------
--------S-------------------------------------S---------------------------------
----------------------------------------------------------------------S-------S-
--------------------------------------------------------------------------------
---------------------------------------------------------------------S----------
--------------------------------------------------------------------------------
---------------------S-----------------S-----------------------------S----------
--------------------------------------------------------------------------------
---------------S--------S--------------------------------------S--------S-------
---------------------------------------------------------------------------S----
-------S------------------------------------------------------S---------------S-
--------------------------------------------------------------------------S-----
----------------------------------------------------------------------S---------
-------S--------------------------------------------------------S---------------
-------------------------------------------------S------------------------------
-------------------------------------------------------------------S------------
------S-------------------------------------------------------------------------
---------------S------------------------------------------------------------S---
--------------------------------------------------------------------------------
-----------------------S----S-----------S----------------------------------S----
---------S--------S-----------------S------------------------------------------S
--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_959
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------GCCTTTTCCCTCTTTCCCTTAAAAG-
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-----------------------------------------------
>reverse_1931
--------------------------------------------------------------------------------
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----------CACAGCTATGTTCGCATGCC--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------
