>input_sequence_87131
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------ATGGCGAGCGGGCGAGGCAGCACACGCGGGGTAGGGGA
AGAAAATGGCAGGACCCGATGGCGAGCTCCTGGTGGTGCTCGCCGGAGCAGTGGTGGCGAGGAGGAGGACCTCGGGTGGC
TAAAGGCGCCAGCGAGCGCGGGGCGATGTAGGGAGCAAAAACAGCTCCAGGAGCTTGACGGGGCGACGGAGCCGTAG---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
>chr7A_1_TraesCS7A01G258000
GCAAGTTCTTTGCCATTTTTATCAAAATGTTAGTATAATATGATTTTTGGCATTTGTCACCATGGCGGAAGGAAAAGGGG
GCCACAATGGCGAAACGGAAATGGTGCCACGGCGAAAAAAATGGAAATGGCGCTACGGC-AACATTCCGGTCCCGATAAC
TCAATTGAGATACCGATGCAAAAGCGAAGGGTGCGGATGTGTGGAACACGCAAGAGATGGTGGTGTGATCCCAATTACCG
GGTTCCCACATGTCGATGGCTCGAAAAACAAGGAACGTGCACGAAACAAACGGTCATGGAGCAAACACGGGGTTCATCTC
ATACATCACACAACATTCGTCCACGACGGTCATCTCGGGGTTATACCTTCCAAGGGTGCGTTCGGGACGGTTCGGGTTCA
ATGGGACGTAGTCATTCTCGCGACGGTAGTGGAAGTAGTGGTACATGATGACGGTAGAGGTACTTGAGGAATCCGAGTTC
TTTGGGATAATTGGGTACTCGTTCATGTTGTAGTCGTACATGGTTCGTAGACGTCTAGTGCGCCCATGGAGGTACTTGGC
GCATCGTTATGAAGGTTGTACACCGATCCAGAAGGGGAACTTGGCACCCAGGGGCTTCGCTGGTTATCCCTGTACTTGGC
ATTCGGTGTGGTACTTGTCATTGGTAGTCGAACTTGGCGATCCGGAGATGGTACATGGCGAATCCAAGTAGTTGTACATG
GGTCAACAGTAGTGGAACTTGAGGTGGTCTTGGCATCGGACTTGCGGCGTTGGACAGAAACATGGTGAGGTTCAGCTGCT
ACCC-ACGCCCATGATGAAAACGAGGCTCGGGCAGGAAGTCGAAGCAGCAAGCAGGGGCGCGGCGGCTGTGGTGGTGGCT
TGCAAGTGGCAACCATCGGTGCTGGTGGAGGCAGGCAGGGCGTCTCGAGGTGAGAGGAGTATATGGCGGCCAGACTACAG
CAGCGGCTGCTGCAGGAGGCTAGGAGCTCCGCGACCGCGGCCATGGCGAGCGGGCGAGGCAGCACACGCGGGGTAGGGGA
AGAAAATGGCAGGACCCGATGGCGAGCTCCTGGTGGTGCTCGCCGGAGCAGTGGTGGCGAGGAGGAGGACCTCGGGTGGC
TAAAGGCGCCAGCGAGCGCGGGGCGATGTAGGGAGCAAAAACAGCTCCAGGAGCTTGACGGGGCGACGGAGCCGTAGGTG
AGGTCCGGGATGCGGCCGACAGGCGATGCAAGTTTCGGTGTAGCGCCATGGCTGAGGCCGGGCTGAGGTCTGGTGGTGCG
GCGCGAGGAAGGAGAGGGAGGCGAGTGAGAGGAGGGGGATTGATGGGGAGACGGGTGTGGCAGTGTTGCACGGATGGAGA
GGGTGATATCGAGAGA-GAGGTGGATCGGGTTCCTGGCGGCTAGGGTTAGAGAGGTCGGCTGGGCCTTGGGCCGCAGCTA
CAGGAGGCCCAAGTGGCCGGCTAGGCTAGTTGGGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTATTTCCTTT
-------AAGAGAAAAGAATTAGAGAGAAGAAAAGA----AAGGGAGGGTTAGTGAA-AGGATTTGTGCAAG-GGGGCT-
-----------ATTTTCCCGAACTCATAAAAATACGAGGAATTTAAATAAAAT-GGCAAGAGGA-TTTTTTTAGAG-AAA
A-TAAATTTGCACAGGTTGAATTTAATTCAACATGTTTAAATTTTGAAGCCCATTCGAATGGACTCTAAATGGTCTGCGA
TTTGAGGAAATGATCTCACACAATTGATGTGATTTATGGGCGGATTTGGAACATTTATGGAGAAAGTAAAATTGCTACTC
AATTTGCAATTTAACTTAAAA-G-GTCGAAAA-TGAAGGATAGGA------------------AGTTTAGTCGGATAAAA
GAAGAGTTGAAGAGTAGTGCAAT--TGTGTTATGGGTGATTCCGAGTTAATAGAATAGTT-ATT-ATATCTCCCTAATAA
TAGTAGGAGACTTTTAA--TATGTTTTAAAGAGAAA-TCACCATGTGAATTCCCT-CGATTTAAATGGATCAAAGATCCA
TGCAATTTATTTAGTTGAGTTTT----AAAAAGGGGT----------T-GCATGATGACATGATGCAATGCACA-TGATG
CAAAAATGAATGCAACAAACCA--AA--CAAA-TCACACGACAAAACT-C--G--TAATAGATGGAAGGCATCTGGAGCG
CCGGTCTTGGGGTGTCACAACTCTCCTCCACTTACAAGAGAT
>chr7A_99
--------------------------------------------------------------------------------
------------------AAATGGTGCCACGGCGATCACAATGGAAATTGTGCTATGGCAAACATTCCGGTCCCTGTAAC
TCGATTGAGATACCGATGCAAAAGAGAAGTGTGCGGATGTGTGGAACACGTAAGAGATGGTGGGGTGATCACAGTTACCG
GGTTCCCACGTGTCGATGGCTCAGAAAACGAGGAACGTGCACGAAACAAACTGCACGGT-GCAAACACGGAGTCCATCTC
ATACATCACACAACATTCGTCCACGACGATTATCTCAGGGTTATACCTTCCAAGGGTGCATTCGGGACGGTTCGGGTTCG
ATGGGACGCAGTCATTCTCACAACGATAGTGAAAGTAGTGGTACACGACGACGGTAG---TACTTGACGAATCCAAGTTC
TTCGGGGTAATTGG------------GTTGTAGTCGTATATGGTTCGTAGACGTC-AGTGCGCCCATGGAGGTACTTGGC
GCATCATTATGAAGGTTGTACACCGATCCAGAAGGGGAACTTGGCACCCAGGGGCTTCGGGGGTTATCCCTGTACTTGGC
ATTCAGTGTGGTACTTGTCATCGCTAGTCGAACTTGGTGATCCGAAGACGGTACTTGGTGAATCCAAGTAGTCATACACG
GGTCAACGGTAGTGGAACTTGAGGTGGTCTTGGCGTCAGACTTGTGGCGTTGTATAGAAACATGGCGAGGTTCAGCTGCT
ACCCCACGTCCATGACGAAAACGAGGCTCGGGCAGGAAGTCAAAGCAGCAAGCAGGGGCGCGGCGGCTGTGATGGTGGCT
TGCAAGCGGCGGCCATGGGTGCTGGTGGAGGCCGGCAGGGCGTCTCGACGTGAGAGAAGCTGATGGCGGCCGGACTACAG
CAGCGGCTGCTGCAGTAGGCTAGGAGCTCCGCGACCGCGGCCATGGCGAGCGGGCGAGGCGGCACGCGCGGGGTAGGGGA
AGAAAAGGGCAGGACCGGACGGCGAGGTCTTGGTGGTGCTCGCCGGAGTAATGGTGGTGAGGAGGAGGGCCTCGGGTGGC
TGAAGGCACCAGCGAGCGCTGGGCTATGCAGGGAGCAACAGCAGCTCCAGGAGCTTGACAGGGCGACGGAGCCGTAGGTG
AGGTCCGGGATGCGGCCGACGGGCGAGACAAGTTTCGGCGGAGCGCCATAGCTGAGGCCGGGCGGAGGTCTGGTGGTGCG
GCGCGAGGAAGGAGAGGGAGGCGAGCGAGAAGAAGGGGATCGATGGCGAGATGGGTGTGGCAGCGCTGCACGGAGGGAGA
GGGTGACATCGAGAGA-G-GGGGGATCGGGCTCTTGGCGGCTAGGGTTAGAGGGGTCGGCTGGGCCTTGGGCCGCAGCTA
CAGGAGGCCCAAGTGGCCGGCTGGGCTGGTTGGG--------------------CTCTCTCTCTC---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
>chr4A_1290
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------GAGAGGGAGACGAGCGAGAGGAATGGGATTGATAGAGA--CGGGTGTGGCGGCGCTGCGCGGAGGGATA
GGGTGAGATCGAGATAGG-GGGGGATCGGGCTCCTGGCGGCTAGGATTAGAGGGGTCGGCTGGGCCTTGGGCCGCAGCTA
CAGGAGGCCCAAGTGGCCGCCTTGGCTGGTTGGG--------------------CTCTCTCTCTCTCTCTTATTTCCTTT
-------AAGAGAAAAGAATTAGAGAGAAGAAAAGA----AAGGGAGGGTTACGGAA-ATTATTTGTGCAAG-GGGGTT-
-----------ATTTTCCCGATCTCATAAAAATATGAGCAATTTAAATAAAAT-GGCAACAGGA-TTTT--TAGAG-AAA
A-TAAATTTGCACACGTTGTATTTAATTCAACATGTTTGAATTTTGAAGCCCATTCGAATGGACTCTAAATGGGCTGAGA
TTTGTGGAAATGACCCCACACATTAGATGTGATTTATGGGCGGATTTGGAACATCTATGGAGACAGTAAAATTGCAACTC
AATTTGCAATTTAACTTAAAA-G-GCCGAAAA-GGAAGGATAAGGCCGAAAAGGAAGGATAGGAGTTGAGTCGGATAAAA
GAAGAGTTGAAGAGTAGTGCAAT--TGTGTTATGGGTGATTCCACGTTAATGGAATATTC-ATT-ATAGCTCCCTAATAT
ATT---GGGAG---G-A--TATGTTATAAAGAGAA--TCAACATGTGAATTCCGT-CGGTTTAAATGAATCGAAGATCCA
TATGATTTATTAAGATGAGTTGG----AAAAAAATGAC-----ATGCTGGCATGATGACATGATGCGATGCAAG-AGATG
ACATGATGAAATGCAACAACAA--CA--AAAA-TAAAACACACGACGGCAAAG--AAGAACATGGAAGGCTTCTGGAGCG
TCGGTCTCGGGGCGTCACAACTCTCCTCCACTTACAAGAGAT
>chr4A_1446
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------CCAGGAGGCCTGCT-GGCTGTTGGGCTCCTTTATCTCTCTCTTACTCTCTTCTCT----TCTTATTTTCTTT
-------AGCAGAAAACAATTAAGGAGAAGAAAAGGAAAGAGGGAG---GTTAAGGAAAGAATTTGAGTACGCGGATAAA
T----------TTC---CCGGACTCGCAAAAATACGAGGAATTTGACAAAAAT-GGCCTGAGGA-TTTTT--AGAG-GAA
GTAAAATCCACACGCGTTGGATTTAACTCGGCAAGTTTAAATTTCGAAACCCAGTCAAATGAACTCCAAATGGGTTGAAA
TTATAGGAGGTGACCCTACACAATAGATGTGATTTATGGGCAGATTTGGGACATTAATGGAGAAAGTAAAATTGCAACCC
AATTTGCAATTTAACTTAAAA-T-GTCGAAAA-GGAAGGATAGGA------------------GGTTGAGTCGGGTAAGG
GAAGAGTTGAAGAGTAGTGCAAT--TGTGTTATGGGTGATTCCAAGTTAATGAAATATTTTATA-ATATCTCCATAATAA
TATTGGAAGGA---T-A--TATGTTATAAAGAGAAC-TCACCATGTGAATTCCCT-CGATTTAAATGGATCAAAGATCCA
TGCCATTTATTTAGTTGAGTT-------AAAAAATGAC-----ATGAT-GCATGATGACATGATGCAATGCACA-CGATG
CAATGATGCATGCAACAAGCAA--AAAACAAA-ACACACAACGAATCT-C--G--G-AAACCTGGAAGGCATCTGAAGCT
CCGGTCTTGGGGCGTCACA-----------------------
>chr6A_1460
A-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------GGCTGCTGGGCTCTCCA--CTCCCTCTCTCA-TCTCTTATTCTCTCTTTTCCCATAT
TAAAACAAAACAGAAAGAAAGAAAGAAAAGAAAGAG-GAGGTAGGG---GG------TGGAATCTGGGCATGGGGATAAT
T----------TTC---ACGGACTTGTAAAAATGTGAGGAATTTAAACAAAAT-GGAAAGAGGA-GTTTT--GGAG-AAA
A-TAGATTCGCACATGTTGAATTTAATTTAACATGTTTGAATTTCAAAACCCATTCGAATGGACTCTAAATGGGCTGAGA
TATGAGGAGATGATCCCGCACATTAGATGTGATTTATGAGCAGATTTGGAACATTTATGGAGAAAGTAAAATTGCAGCTC
AATTTGCAATTTAACTTAAAAAG-GTCG-AAAAGGAAGTATATGA------------------AGTTGAGTCGGATAAAA
GAAGAGTTGAAGAGTAGTGCAAT--TGTGTTATGGGTGATTCCAAGTTAATGAAATATTT-ATA-ATAGTTCCCTAATAA
TAGTAGGAGACTTTC-A--TATGTTATAAAGAGAATTTCACCATGTGAACTCCCT-CGATTTAAATGGATCAGAAATCCA
TGCAATTTATTTAAGTGAGTTTT----AGTTAGCTTTAAGAAAAAGATGTCATGATGACATGATGCCATGCAAAAATATG
CAATGATGAATGCAACAAGCAA--AA--CAAAATCACATGACGAACAA-C--GAAAAAAACATGGAAGGCTTCTGGAGCG
TCGGTCTCGGGGCGTCACAACACTCCACCACT-ACAAGAG--
>chr3A_1486
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------CTCCTT-TCTCTCTCTCTCTCTTATTTACTAT
-------AAACAGAAAATAACAAAGAAGAAAAAGAG-AAGAAAGGAAAAGTTAGGGATAGAACTTGGACACGCGGACAA-
-----------TTTTTTTCGGACCCACAAAAATACGAGGAATTTGACAAAAAATGGCCTCATGATTTTTT--AGAG-GAA
GTAATATCCACACGCGTTGGATTTAACTCGGCAAGTTCGAATTTCGAAACCCATTCAAATGAACTCCAAATGGGTTGAAA
TTATAGGAGGTGACCCTACACAATATATGTGATTTATGGGCAGATTTGGGACATTAACGGAGGAACTAAAATTGCAACCC
AATTTGCAATTTGACTTAAAA-G-GTCG-AAA-GGAAGGATAGGA------------------GGTTGAGTCGGGTAAGG
GAAGAGTTGAAGAGTGGTGCAAT--TGGGTTATGGGTGATTCCAAGTTAATGGAATATTTTATA-ATATCTCCATAATAA
TATTGGGAGGA---T-A--TATGTTATAAAGAGAAC-TCACCATGTGAATTCCCT-CGATTTAAATGGATCAAAGATCCA
TGCCATTTATTTAGTTGAGTT------AAAAAAATGAC-----ATGATGGCATGATGGCATGATGCAATGCACA-CGATG
CAATGATGAATGCAAAGAACCA--AA--CAAA-TCACACGACGAAACC-C--G--AAAACCCTGGAAGGCATCTGAAGCT
CCGGTCTTGGGGTGTCACAAC---------------------
>chr6A_1488
CTCTC---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------TCTTCCTCACTCTT--TTTCCTT
-------TAACAGAAAATCATAGAGAGAAGAAAAAG-AAGAGGGGG---GTTAGGGAAAGAATTTGCGCACGAGGGTAA-
-----------TTT---CTGAACTCACAAAAATGTGAGGAATTTAAATAAAAT-GACAAGAGGA-TTTTT--GGAGAAAA
A-TAGATTTGCACATGTTGAATTTAATTCAACATGTTTGAATTTTGAAACCCATTCGAATGGACTCTAAATGGGTTGAGA
TTTGAGGAGATGATCCCACACATTAGATGCGATTCATGAGCATATTTGGAACATTTATGGAGAAAGTAAAATTGCAGCTC
AATTTGCAATTTAACTTAAAAAG-GTCG-AAAAGGAAGTATATGA------------------AGTTGAGTCGGATAAAA
TAAGAGTTGAAGAGTAGTGCAATTCT--GTTATGGGTGATTCCAAGTTAATGGAATATTT-ATA-ATAGCTCCCTAATAA
TAGTAGGAGACATTT-A--TATGTTATAAAGAGAATTTCACCATGTGAACTCCCT-CTATTTAAATGGATCAAAGATCCA
TGCCATTTGTTTGAGT---TTTTTTTTAATAAAATGGC-----AAGATGGCATGATGACATGATGCAATGCACA-TCATG
CAAAAATGAATGCAAGAAGCAA--AA--CAAA-TCACACAACGAACAA-C--G--AAAAACATGGAAGACTTCTAGAGCT
CCGGTCTTGGGGCATCACA-----------------------
>chr2A_1488
CTCCTT--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------TCTCTCTCTCTCTTATTTTCTAT
-------AAACAGAAAATAACAAAGAAGAAAAAGAG-AAGAAAGGAAAAGTTAGGGATAGAACTTGGACACGCGGACAA-
-----------TTTTT--CGGACCCACAAAAATACGAGGAATTTGACAAAAAT-GGCCTCATGA-TTTTT--AGAG-GAA
GTAAAATCCACACACGTTGGATTTAACTCGGCAAGTTCGAATTTCGAAACCCATTCAAATGAACTCCAAATGGGTTGAAA
TTATAGGAGGTGACCCTACACAATATATGTGATTTATGGGAAGATTTGGGACATTAATGGAGGAAGTAAAGTTGCAACCC
AATTTGCAATTTAACTTAAAA-G-GTCG-AAAAGGAAGGATAGGA------------------GGTTGAGTCGGGTAAGG
GAAGAGTTGAAGAGTAGTGCAAT--TGGGTTATGGGTGATTCTAAGTTAATGGAATATTTTATA-ATATCTCCATAATAA
TATTGGGAGGA---T-A--TATGTTATTAAGAGAAC-TCACCATGTGAATTCCCT-CGATTTAAATGGATCAAAGATCCA
TGCCATTTATTTAGTTGAGTT-------AAAAAATGAC-----ATGATGGCATGATGACATGATGCAATGCACA-CGATG
CAATGATGAATGCAAAGAACCA--AA--CAAA-TCACACGACAAAACC-C--G--AAAACCCTGGAAGGCATCTGAAGCT
CCGGTCTTGGGGCGTCA-------------------------
>chr7A_1491
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------TCTCTCTCCCTCTCTCTTATTTTCTAT
-------AAACAGAAAATAACAAAGAAGAAAAAGAG-AAGAAGGGAGGTGTTGGGGA-AGAAGTTGGACACG-GAGATA-
-----------ATTTTCCCGGACTCATAAAAATATGAGGAATTTAAATAAAAT-GGGAAGAGGA-TTTTT--AGAG-AAA
A-TAAATTCGCACATGTTGAATTTAATTCAACATGTTTTAATTTTGAAGCCCATTCGAATGGACTCAAAATGGTCTGAGA
TTTGTGGAGATGATCCCACACATTAGATGTGATTTATGGGCAGATTTGGAACATTTATGGAGAAAATAAAATTGCAACTC
AATTTGCAATTTAACTTAAAA-G-GTCG-AAAAGGAAGGATATGA------------------AGTTGAGTCGGATAAAA
GAAGAGTTGAAGAGTAGTGCAAT--T--GTGATGGGTGATTCCAAGTTAATGGAATATTC-ATT-ATAGCTCCCTAA-AT
ATT---GAGAG---T-A--TATGTTCTAAAGAGAAA-TCACCATGTGAATTCCCT-TGATTTAAATGGACCGAAGGTCCA
TCCAATTTATTTAGTTGAGTTTT----ACAAAA-----------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
>chr2A_1526
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------AGAACTGAAAGAAAAAG-GAAAGAGGG---GTTAGGAATGGGGATTTGGCAAG-GGTCTA-
-----------TTTTTCATGGACTCACAAAAATGTGAGGAATTTAAATAAAAT-GGCCAGAGGA-TTTTT--GGAG-AAA
AATATATTCGCACATGTTGAATTTAATCCAACATGTTTGAATTTCGAAACCCATTCGAAAGGACTCTAAATGGGCTGAGA
TCTGAGGAGATGATCCCACACATTAGATGTGATTTATGAGCAGATTTAGAACATTTATGGAAAAAGTAAAATTGAAACTC
AATTTGCAATTTAACTTAAAA-G-GTCG-AAAAGGAAGGATAGGA------------------AGTTGAGTCGGATAAAA
GAAGAGTTGAAGTGTAGTGCAATTGT--GTTATGGGTGATTCCAAGTTAATGGAATATTTTATA-ATAGCTCCCTAATAA
TAGTAGGAGAC---TTGGGTATGTTTTAAAGAGAATTTCACCATGTGAATTCCCG-CGATTTAAATGGATCGAAGATCCA
TACGGTTTATTTAGTTGAGTTTTTTTTAAAA---GGT----------T-GCAAGATGACATGATACAATGCAAA-TGATG
CCATGATGCAATGCAACAAACAA--------A-TAAAACAAACGGGGACAAAG--AAAAACATGGAAGGCGTCTGGAGCG
CCGGTCTTGGGGCGTCACAACTCTCCTCCACTTACAAGAGAT
>chr4A_1536
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------AGAAAAAG-GAAAGAGGG---GGG-----------TTGCGAATG-GGGATTT
GGCAAGGGTCTATTTTCACGGCCTTGCAAAAATGTGAGGAATTTAAATAAAAT-GG-AAGAGGA-GTTTT--GGAG-AAA
AAAAGATTCGCACATGTTGAATTTAATTCAACATGTTTGAATTTTGAAACCCATTCGAACGAACTCTAAATGAGCTGAGA
TTTGAGGAGATGATCCCACACATTAGATGTGATTTATGAGCAGATTTGGAACATTAATGAAGAAAGTAAAATTTCAACTC
AATTTGCAATTTAACTTAAAAAAAGTCG-AAAAGGAAGTATATGA------------------AGTTGAGACGGATAAAA
GAAGAGTTGAAGAGTGGTGCAATTGT--GTTATGGGTGATTCCAAGTTAATGGAATATTT-ATA-ATAGCTCCCTAATAA
TATTGGGAGGA---T-A--TATGTCATAAAGAGAAAATCACCATGTGCATTTCCCTTGATTTAAATGGATCGAAGATCCA
TGCAATTTATTTAGTTGAGTTTT----AAAAAGGGG-----------T-GCATGATGACATGATGCAATGCAAA-TGATG
CCATGATGAAATGCAGCAAGCAAGAA--CAAA-TCACACCACAAAATCTC--G--GAAACCAAGGAAGGCATCAGAAGCT
CCGATCTTGGGGCGTTACAACACTCCACCACT-ACAAGAG--
>chr6D_1563
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------A-AGAATTTGAGCATG-GGGATT-
-----------ATTTTGCCGGACCCACAAAAATACGAGGAATTTGACAAAAAT-GGCCTGAGGA-TTTTC--AGGG-GAA
GTAAAATCCGCACATGTTGAATTTAGCCCGACATGTTTGAATTTCGAAACCCATTCAAATGATCTCCAAATGTGTTGGAA
TTAAAGGAGCTGACCCTACACACCAGATGTGATTTATGGGCAGACTTGGAACATTTACGAAGAAAGTAAAATTGCAACTC
AATTTGCAATTTAACTTAAAA-G-GTCG-AAAAGGAAGGATAGGA------------------AGTTGAGTTGGATAAAA
GAAGAGTTGAAGAACAATGCAAATGT--GTTATGGGTGATTCCAAGTTAATGGAATATTT-ATATATAGCTCCCTAATAA
TAGTAGGAGAC---TTTCGTATGTTTTAAAGAGAATTTCACCATGTGAATTCCCC-CGATTTAAATGGATCAAAGATCCA
TACGGTTTATTTGGTTGAGTTTT----AAAAC-GGGT----------T-GCATGATGACATGATGCAATGCGAA-TGGTG
ACATGATGAATGCGAC-AAGCA--AA--CAAA-TCACACGACGAAATT-C--G--GAATCCGTGGAAGGCATTTGGAGCG
CCGGTCTTGGGGCGTCACA-----------------------
>SNPs
SSSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSS-----------------SS-S---------S-S----S------------------SS----
--S---------------------S----S--------------------S------------S------S--S------
---------S------------SS-----S---------------------S-SSSS-SS----------S--S------
----------------------------S-S-----S----------------------S-------------------S
--------S----------S-S---S-----S-------------S--S--------SSS-------S------S-----
--S---S-------SSSSSSSSSSSS------------S----------------S------------------------
-----S-----------------------------------------------------SS-------------------
----S----------------S-S-------------S------S---S-----S---S-------------SS----S-
-------S--------------------------S--S------S-------S-S----------S--------------
--------S------S-------------------------S-----------------------------S--------
------S---SS----S---------------S---------------S-------S--SSS---------S--------
---------------S--------------------------------------------S----S--------------
------S---------S--S------S--S------------------S-S------S----------S-----------
-S-----S-----------S----S---S---------S-S------------------S--------------------
--------------------S-----SS----------S-S--------S-------------S----------------
-------------------------S-------S------------S----------------S-S--------S-----
------S-----------S--S--------S---------------------S---------------------------
----------------------S----S------SS----S---------------------------------------
-----------------------------------------------------S-----------------------S--
----------------------------------------------------------------------S---------
--------------S--------------------------------------------------------------S--
---------------S--------S--------------------------------------------------S----
---------------------------------S---------------------------------S------------
-------------------------------------------S-------S-----S----------------------
---------------S----------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------S----S-------------------
------------------------------------------
>forward_250
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------CCAATTACCG
GGTTCCCACA----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
>reverse_1463
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------AGGCTAGTTGGGCTCTCTCT--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
