>input_sequence_87127
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-------------------------ATGTACTTGTCAAGGTATAGTTTGAGAAGCTTGGACCTCTCTTCTTCCCCAGGCA
GGGGGAATTCGAGAACCTCATCGATACGGTCAGCAACAGCGGAGTCAAGGTCACCAGGCCTGTTGGTTGCTAGTGCAAGC
ACAATGTCCTTGGACTGGTCACCTGTCCGGAAAAGGAGAGCATTCAAAGCACTCCTTTGA--------------------
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>chr6B_1_TraesCS6B01G294400
ATTGGGTTGCCTGGATTCATTTTGAGCAGCACTGCTGCTATTAGTAATTTAC----------------------------
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---------------TAATTTAGTTCTCCGTTGTTTGGACATTAATTTTT-----GAAGAATATGCTTTGCGGAACACAG
AAACCTTCTATAAA---CGCTGCATACAATACGA--TGTTACTAAAATGCCCTATGATGTTTAAAGGAGGGGAGA-----
--ATCGGCTGTGTGCATCGCCAT-GATGCAAAAGCCAGGATCTTCCCCTTCACGAAAAAAAAAAGAGAAAAAAAGATTTT
GCTGATACAAATATGCCCCTACGTTTAATTTCGTAAGGGGCGGCTCTAAATATTGGTCGAGTTTCTCGACAGGTACAAAG
AGCCCAATCAAAGTTACAGCGACTGTCGATGACTATATTATTAGT-AAATCAAATCATACCACCAAAGGCTAGTATATGC
GGACAAATAGAACAGAAAAATGCCGAGCTTGTTGAAGTGAAGTGCATCATGTTCACGTTGTTGATACTCCCTCCATTCGG
AATTAGTTGTCGCAGAAATGAATGTATCTAGATGTATTTTAGTTCTAAATACATCCATTTCTGAGACAAGTAATTCAGAA
CGGAGGGAGTACATGTAAGCCTCCAAAATTCCGCCCGGGTGTCAGGATATAGCAAAGCAAAAAGAATCAGCGAAGACGAG
GCAGGTGAATCACCGG--CCCCCGTCCAGGCACTCTCTCCCGAACTGAACA-TTGTAGCAATCTACTCCTAGGCATGACC
AGCTATCTTTCGCCTCTGCTGGTGCTCGGCGACCTTGTAATCTACAACCTCGCGGAACAGGCCCGGGGTCAGCTCGCACT
CCGTGCTCCCGTACACAGCGGCCTGCACGCTCGCCATCAGCTTCGCTATCTCTCTTCCGGAGAAGCCGTCGGTCTTGGCG
GCAGCCTCCTGGATTAACTCGTCGGTGACCCCCTTCACCGCTATCTGCTGAGGCTGGCGGCGGAAGAAGCTGAACAAGCC
CTTTCGCTTTTCGCCAGCCTTCACTATGTACTTGTCAAGGTATAGTTTGAGAAGCTTGGACCTCTCTTCTTCCCCAGGCA
GGGGGAATTCGAGAACCTCATCGATACGGTCAGCAACAGCGGAGTCAAGGTCACCAGGCCTGTTGGTTGCTAGTGCAAGC
ACAATGTCCTTGGACTGGTCACCTGTCCGGAAAAGGAGAGCATTCAAAGCACTCCTTTGAGCTTCGCTCATGTATGTCTT
GTTCCGTCTGCAGAATTAAAGAAATGTCAAACACTGCA--GTTGGGTAAAGGCAAAATATATTACCAACAAGAAGTACAG
GACTTGAGAGCAGCAATATCTCAGTGGTATCGGACATAGGAAGAAGCAACATGACAATTATAGAGCATAGAAATAGCC-A
CCACATTGCTACCCCTTCTACTGCTGATGTTTAGCAATTACACGACAATTTCAAATACTTTTTGAAATATCAAATGCTGC
AAAATCACATGATATCACAGAATCTAGTTAACAAACAGTAGTCTGAAGATTTGACTATCACTTACTCGCACAGGAAAGCG
TCAGCTTCGTCAATGAAGAGGAGTAAACCTCTATTAGATTTCTTTGCCCAGTCAAATAACTGATGAATCTTGGTGACTGC
TTGCGATCCTAATGGTGCAACATCTCCACCAGTCATCAGTGCATAATCTAGTCCCTGTAAGTGGTTATAATGTTAGTGAA
CTAATGGTTATAATATTTCAAATTATTGCATTAGTGCTCACAGGGAATTGGCTTGTGTAACTTACAGATTCGCGAGCTAG
TTCTCTTGCTGCCATTGTTTTCCCTGTGCCAGGAGGCCCATAGAAAAGCATATTCCTAAAGGGGGCTTGGTGAAGCTTCG
TGTTTGCGGTGGCATTAGCTAGTTGGTTCACTCTCTTCTGAAGAGATGGATTTAGAATAACATCACCAAAACCTTTCCCA
TCCTTCCCCAGATTGCTCCCATTTTTCAGTTTGCTAGTCACAGCACTCATAGCACGTGAAGGGACACCAGACCAAGGATA
CTTCCCTCGTGATGACTCTCTGATCAGTGATGGCTGACCCAGAATACGGTCAACATAACCCCAGACTACTCTTGCACCTT
CCCTGGAGGCAAATGCGTTAATTGTATAAGAGCATCACATGCACAAATGAAAAATGCAAGTATAACTACAAAATGTCATT
TGTGTTGTTGGGGCTAAAGAAAG
>chr6A_1
ATTGGGTTGGTTGGATTCATTTTGAGCAGCACTGCTGCTATGATCCTTCCTTATAATTTACTACTGCCTCTGTAAATTAA
TATAAGAGCGTTTAGATCACTATTATATTATACT----------------------------------------------
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-------------AGTTTACAGAGGGAGTAATCTAA--------------------------------------------
---------------------------------------------------TATATGAGCATTTAGATCACTATTATATT
AGTTCACAGAGGGAGTATTTTAGTTCTC----------------------------------------------------
-----------------CGCTGCATAAAATACGATGTGTTACTAAAATGCCTTATGATGTTTAAGGAGGGGAGATGGTGC
GGGTCGGCTGTGTGCATCGCCAT-GATGCAAAAGCCGGGATCTT-CCCTTCACAAAAGAAAAAGGAGGAAAAAAGATTTT
GCTGATACAAATATGCCCCTATGTTTAATTTCGTAAGGGGCGGCTCTAAATATTGGTCGAGTTTCTCGACAGGTGCAAAG
AGCCCAATCAAAGTTACAGCGACTGTCGATGACTATATTATTAGTAAAATCAAATCATGCCACCAAAGGCTAGTGTATGC
GGACAAATAGAACAGAAAAATGCCGAGCTTGTTGAAGTGAAGTGCATCATGTTCACGTTGTAGATAC-------------
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------------ATGTAAGCCTCCAAAATTCCGCCCAGGTGTCAGCATATAGCAAAGCAAAAAGAATCAGCGAAGACGAG
GCAGGTGAATCACCGG-CCCCCCGTCCAGGCACTCTCTCCCGAACTGAACATTTGTAGCAATCTACTCCTAGGCATGACC
AGCTATCTTTCTCCTCTGCTGGTGCTCGGCGACCTTGTAATCTACAACCTCGCGGAACAGGCCCGGGGTCAGCTCGCACT
CCGTGCTCCCGTACACAGCGGCCTGCACGCTCGCCATCAGCTTCGCAATCTCTCTTCCAGAGAAGCCGTCGGTCTTGGCG
GCAGCCTCCCGGATCAACTCGTCGGTGATCCCCTTCACCGCTATCTTCTGAGGCTGGCGGCGGAAGAAGCTGAACAAGCC
CTTTCGCTTTTCGCCAGCCTTCACTATGTACTTGTCAAGGTATAGCTTGACAAGCTTGGACCTCTCTTCTTCCCCAGGCA
GGGGGAATTCAAGAACCTCATCGATACGGTCAGCAACAGCGGAGTCAAGGTCACCAGGCCGGTTGGTTGCTAGTGCAAGC
ACAATGTCCTTGGACTGGTCACCTGTCCGGAAAAGGAGAGCATTCAGAGCACTCCTTTGAGCTTCGCTCATGTATGTCTT
GTTCCGTCTGCAGAATTAAAGAAATGTCAAATGCTGCA--GTTGGGTGAAGGCAAAACATATTACCAACAAGAAGTACAG
GACTTGAGAGCAGCTATATCTCAGTGGTATCGGACATAGGAAGAAGCGACATGACAATTATAGAGGATAGAAATAGCC-A
CAACATTGCTACCCCTTCTACTGCTGATGTTTAGCAATTACACGACAATTTCAAATACTTTCTGAAATATCAAATGCTGC
AAAATCACATGATATCATGGAATCTAGTTAACAAACAGTAGTCTGAAGATTTGACTATCACTTACTCGCACAGGAAAGCG
TCAGCTTCATCAATGAAGAGGAGTAAACCTCTATTAGATTTCTTTGCCCAGTCAAATAACTGATGAATCTTGGTGACTGC
TTGCGATCCTAATGGTGCAACATCTCCACCAGTCATCAGTGCATAATCTAGTCCCTGTAAATGGTTATAATGTTAGTGAA
CTTAT------AATATTTCAAATTATTGCATTAGTGCTCACAGGGAATTGGCTTGTGTAACTTACAGATTCGCGAGCAAG
TTCTCTTGCTGCCATTGTTTTCCCTGTGCCAGGAGGCCCATAGAAAAGCATGTTCCTAAAGGGGGCTTGGTGAAGCTTCG
TGTTTGCGGTGGCATTAGCTAGTTGGTTCACTCTCTTCTGAAGAGATGGATTCAGAATGACATCACCAAAACCTTTCCCA
TCCTTCCCCAGATTGCTCCCATTTTTCAGTTTGCTAGTCACAGTACTCATAGCACGTGAAGGGACACCTGACCAAGGATA
CTTCCCTCGTGATGACTCTCTGATCAGTGATGGCTGACCCAGAATACGGTCAACATAACCCCAGACTACTCTTGCACCTT
CCCTGGAGGCAAATGCGTTAATTGTATAAGAGCATCACATGCACAAATGAAAAATATAAATATAACTACAAAATGTAATT
TGTGTTGTTGGGGCTAAAGAAAG
>chr6D_1
ATTGGGTTGGTTGGATTCATTTTGAGCAGCACTGCTGCTATGATCCTTCCTTATAGTTTACTACTCCCTCTGTA------
---------GTTTAGGTCACTATTATATTATACTCCCTTCGTTCCTAAATATAAGTCTTTTTAGAGATTCCACAATAGAT
TACATACGAAGCAAAATGAGTGAATCTACACTTTAAAATATGTCTATAGTTTATAGTGCAATCTCTAAAAGGACTTATAT
TTAGAAGCAAAATGAGTGAATCTACACTTTAAAATATGTCTATAGTTTATAGTGCAATCTCTAAAAGGACTTATATTTAG
GAACAGAGGGAGTAGTTTACATAGGGAGTAATCTAATACTTCCTCCGTCCTAAAATAAGTGACTCGAGTTTGTATTAACT
TTGTACTAAAGTTAGTACAAAGTTGAGTCACTTATTTTGAGATGGAGGAAGTATATGAGCATTTAGATCACCATTATATT
AGTTTACAGAGGGAGTAATTTAGTTCTCTGAGTATCATTTCTTATACCCAACCAAGAAGAATATGCTTTGCGTAACACAG
AAATCTTCTACTAAACCCGCTGCATAAAATACGATGTGTTAATAAAATGTCTAATGATGTTTAAAAGAGGGAGATGTTGC
CGATCGGCTGTGTGCATCGGCATAGATGCAAAAGCCGGGATCTTTCCCTTCACAAAAGAAAAAGGAGAAAAAATGATTTT
GCTGATACAAACATGCCCCTATGTTTAATTTCGCAAGGGGAGGCTCTAAATATTGGTCGAGTTTCTCGACAGGTGCAAAG
AGCCCAATCAAAGTTACAGCGACTGCCGATGACTATATTATTAGT-AAATCAAATCATGCCACCAAAGGCT-GTATATGC
GAACAAATAGAACAGAAAA-TGCCGAGCTTGTTGAAGTGAAGTGCATCATGTTCACGTTGTTGATAC-------------
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------------ATGTAAGCCTCCAAAATTCCGCCCAGGTGTCAGGATATAGCAAAGCAAAAAGAATCAGCGAAGACGAG
GCAGGTGAATCACCGGCCCCCCCGTCCAGGCACTCTCTCCCGAACTGAACATT-GTAGCAATCTACTCCTAGGCATGACC
AGCTATCTTTCTCCTCTGCTGGTGCTCGGCGACCTTATAATCTACAACCTCGCGGAACAGGCCCGGGGTCAGCTCGCACT
CCGTGCTCCCGTACACGGCGGCCTGCACGCTCGCCATCAGCTTCGCGATCTCTCTTCCGGAGAAGCCGTCGGTCTTGGCG
GCAGCCTCCCGGATCAACTCGTCGGTGATGCCCTTCACCGCTATCTTCTGAGGCTGGCGGCGGAAGAAGCTGAACAAGCC
CTTTCGCTTTTCGCCAGCCTTCACTATGTACTTGTCAAGGTATAGCTTGACAAGCTTGGACCTCTCTTCCTCCCCAGGCA
GAGGGAATTCGAGAACCTCATCGATACGGTCAGCAACAGCGGAGTCAAGGTCACCAGGCCTGTTGGTTGCTAGTGCAAGC
ACAATGTCCTTGGACTGGTCACCTGTCCGGAAAAGGAGAGCATTCAGAGCACTCCTTTGAGCTTCGCTCATGTATGTCTT
GTTCCGTCTGCAGAATTAAAGAAATGTCAAATGCTGCACAGTTGAGTAAAGGCAAAACATATTACCAACAAGAAGTACAG
GACTTGAGAGCAGCTATATCTCAGTGGTATCGGACATAGGAAGAAGCGACATGACAATTATAGAGGATAGAAATAGCCCA
CCACATTGCTACCCCTTCTACTGCTGATGTTTAGCAATTACACGACAATTTCAAATACTTTATGAAATATCAAATGCTGC
AAAATCACATGATATCATGGAATCTAGTTAACAAACAGTAGTCTGAAGATTTGACTATCACTTACTCGCACAGGAAAGCG
TCAGCTTCATCAATGAAGAGGAGTAAACCTCTATTAGATTTCTTTGCCCAGTCAAATAACTGATGAATCTTGGTTACTGC
TTGCGATCCTAATGGTGCAACATCTCCACCAGTCATCAGTGCATAATCTAGTCCCTGTAAATGGTTATAATGTTAGTGAA
CTAAT------AATATTTCAAATTATTGCATTAGTGCTCACAGGGAATTGGCTTGTGTAACTTACAGATTCGCGAGCAAG
TTCTCTTGCTGCCATTGTTTTCCCAGTGCCAGGAGGCCCATAGAAAAGCATGTTCCTAAAGGGGGCTTGGTGAAGCTTCG
TGTTTGCGGTGGCATTAGCTAGTTGGTTCACTCTCTTCTGAAGAGATGGATTTAGAATAACATCACCAAAACCTTTCCCA
TCCTTCCCCAGATTGCTCCCATTTTTCAGTTTGCTAGTCACAGTACTCATAGCACGTGAAGGGACACCGGACCAAGGATA
CTTCCCTCGCGATGACTCTCTGATCAGTGATGGCTGACCCAGAATACGGTCAACATAACCCCAGACTACTCTTGCACCTT
CCCTGGAGGCAAATGCGTTAATTGTATAAGAACATCACATGCACAAATGAAAAATATAAATATAACTACAAAATGTAATT
TGTGTTGTTGGGGCTAAAGAAAG
>SNPs
---------SS------------------------------S-SSSS-SSSS----------------------------
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----------------------------S-SSSS-SSSSSS---SSSSSS----------------------S-------
---S------SS--------------S------------------------S-------------------SSSS-----
------------------------------------S-------S--------S---S-----S----------------
---------------------S----------------------------------------------------S-----
----------------------------------------------------------S---------------------
-------------------------------------------------------------------SSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSS------------------------S-------------------------------------------
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-----------S--------------------------------------------------------------------
----------------------------------------------S---------------------------------
---------S----S-------------S-----------------S---------------------------------
---------------------------------------------S----S-----------------------------
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----------------------------------------------S---------------------------------
-------------------------------SS------------------------S----------------------
--------------S--------------------------------S-----------------S--------------
-------------------------------------------------------------S------------------
-----------------SS-------------------------------------------------------------
--------S-----------------------------------------------------------------------
------------------------------------------------------------S-------------------
-----SSSSSS------------------------------------------------------------------S--
---------------------------------------------------S----------------------------
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-------------------------------------------S------------------------S-----------
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-------------------------------------------------------SS--S----------------S---
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>forward_694
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----------------------------------CCAGGATCTTCCCCTTCACG--------------------------
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>reverse_1713
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--------------------------------ACTGCAGTTGGGTAAAGGCA----------------------------
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