>input_sequence_87103
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------ATGGTATTGAGTGTTCCAATATCAAACTTCACATTC
ATTGCACCTAATTTCTGGAACATGGCGATCGCTTCGTCTGCACAATTATTTCTACAAAGGCCTTTAAGTATTATATTGTA
TACGGGAATGTCCACTGTCGTTTCACTTTCGATCATCTCATGGAACATTTTCCTTGCAACGACAGTTCTTGCAGCATGA-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
>chr1B_1_TraesCS1B01G074800
AGGTAGTTCTTTTTATACATCTGTGTGTATCTGAAGTGGAGAGGTATAAAGCAAGGTGAACCAACGCGAGGCTGACGGCA
GCTCTCCTCCCAAACATAACATCAGCAACCTCAATCATCGATGCTTCCAGGACCCATTTGCCCGAAATACAAAACAGATT
GCACAAACGAAAAGTAAATCCACCCTTTGCATACATATCAGATCTGGGAATGAAGGAAAGTGGCAGTTTTGGAGAGATTA
CATATTCTTAGGTGGCTGCTAGAAAAGATTGTATTGGTACTCGTTGTGCTTACATTCCACAATCACCATTAGAAGCTATT
ACCCCCAAAACTGCAACCATTTGTGTTAGACTACTGGGTCTACCTTTCCTCACCCATCGAAGATTAAATACT-CATAGAC
ATTTCACAATCTTGTGATCTTGGCAAACCGCAAAATGTACTCAATGAAACACGAGGTG-TCTACTTTTTACAAGCAGGCA
CTTTGGAAATCTTATACTGGCAGGAAGG--TTGTGACAAGCAAATAGTTCGACTCTACTGAGATAGCCTCATATGCAATG
CCTCAGCTAGTCAACCAAATCCATAAAAAAACTGATACTTTGCAGGAAGCAATTTAATATTCTCCTGATATTTCCCACTC
CTCGAAAAGAGAGACAACATCAGCGACGTAGTTGAAGCTTCAAGTAAGATGTTCTTCTCATCAACCTTGGACAAATAATA
TCCAGCCTTGGCGGTCTCACCTTTTTCCAACAACATTCTGATGATATTTTCTCAAAAAAACAACATTCTGATGATATAGT
TTATAAGACGAGAGCTGGGAGCTATACCACTCTTGTCCATTGATGAAAAAAATATGCTTAGCATCTTCCACTGATCCTTC
CTTCAGATAATTTATTATCATTATGCTGTAAGTAGAAGCATTAGGCACCAACCTGCTGGCTGATATTGCAGCAAACAAAT
CCTTAGCTTCTTCTTTTCTTCCAACCTTGTACAATGAATTAATCATGGTATTGAGTGTTCCAATATCAAACTTCACATTC
ATTGCACCTAATTTCTGGAACATGGCGATCGCTTCGTCTGCACAATTATTTCTACAAAGGCCTTTAAGTATTATATTGTA
TACGGGAATGTCCACTGTCGTTTCACTTTCGATCATCTCATGGAACATTTTCCTTGCAACGACAGTTCTTGCAGCATGAA
ACAACCCATCTAGTATGATGCCATATGTAACAGTGTCAGGTTTTATTCTCTTATGTGGCATTTCCCTGAACAGAGTCAAA
CCATCATCGATCCTTCCATTTCTACAATAGCCATTAACAAGCGTGTTGTATGTAACAATATCAGGCTCAGCACCAACTGA
TTTCATGGCATCAAGTACTCCAAATGCTTTATCCA-CTCGCCAACTAAGCAATATCCATCAATCAGTGAATTAAATGTAA
TGATATTAGGCCTCTCATCTATGGCAGTAACCAAGTCAAAGACATCTTGTGCATCCATAACTCCTCCTTCTTTGCATAGA
GTGTTTATTATTGAATTGAAGAAC-ACAATGTCAGGACGAGGAATACCTTTGTTCATCATTTCAGAAACCAGCCCCTTAG
CTTTAACCAAATCACCATGCATACAAAAACCATGAATTAGGGAGTGATAAACAGTTGTGTCCGGCTGAAAACCCATATCA
GTCATCTCATTGAACTTGTCCATAGCATTGGCCAGCCTACGCAATCTGCAAAATGCGGCTATTACAGTGGAATAGGTGAC
TACATCGGGACCCACTCGTTGGCTTTGGGCTGATCATCCTGCAGATGAATTAGTGCAACTTACGA-CTCATATACTTCAT
CAGTGAAGAATATGATATCAAGTTCATCAGATGAATTTCATCAATCAGTAAAACAGATATTTCAGTATGAGGACATGTGA
AATGAAAGTTCATTTCATCATGATTCGCATGCGTCCTTTCAGGCAATTTTTGTCAGGCCTCCAGCAAATTCTTCAGACAT
TTAAGGCACGTCTGGAGACCTGACCCTGCATAAGAGATTAGCTCCTTTTCTTCACCACCCACATCCAAAGGGGTGGCAAA
GAGTTCATCACTCTGCGAGCACCATATGAGAAAGGTGGCATTGAGGCCAATCCATTTTGTTTCACATAAGAGGGGTTAGG
GTAAGCATATGAATAAGCAGAGAAATTCTTCGAGGACTTATA
>chr1B_1
AGGTAGTTCTTTTTATACATCTGTGTGTATCTGAAGTGGAGAGGTGTAAAGCAAGGTGAACCAACGCGAGGCTGACGGCA
GCTCTCCTCCCAAACATAACATCAGCAACCTCAATCATCGATGCTTCCAGGACCCATTTGCCCGAAATACAAAACAGATT
GCACAAACGAAAAGTAAATCCACCCTTTGCATACATATCAGATCTGGGAATGAAGGAAAGTGGCAGTTTTGGAGAGATTA
CATATTCTTAGGTGGCTGCTAGAAAAGATTGTATTGGTACTCGTTGTGCTTACATTCCACAATCACCATTAGAAGCTATT
ACCCCCAAAACTGCAACCATTTGTGTTAGACTACTGGGTCTACCTTTCCTCACCCATCGAAGATTAAATACT-CATAGAC
ATTTCACAATCTTGTGATCTTGGCAAACCGCAAAATGTACTCAATGAAATACGAGGTG-TCTACTTTTTACAAGCAGGCA
CTTTGGAAATCTTATACTGGCAGGAAGG--TTGTGACAAGCAAATAGTTCGACTCTACTGAGATAGCCTCATATGCAATG
CCTCAGCTAGTCAACCAAATCCATAAAAAAACTGATACTTTGCAGGAAGCAATTTAATATTCTCTTGATATTTCCCGCTC
CTCGAAAAGAGAGACAACATCAGCGACGTAGTTGAAGCTTCAAGTAAGATGTTCTTCTCATCAACCTTGGACAAATAATA
TCCAGCCTTGGCGGTCTCACCTTTTTCCAACAACATTCTGATGATATTTTCTCAAAAAAACAACATTCTGATGATATAGT
TTATAAGACGAGAGCTGGGAGCTATACCACTCTTGTCCATTGATGAAAAAAATATGCTTAGCATCTTCCACTGATCCTTC
CTTCAGATAATTTATTATCATTATGCTGTAAGTAGAAGCATTAGGCACCAACCTGCTGGCTGATATTGCAGCAAACAAAT
CCTTAGCTTCTTCTTTTCTTCCAACCTTGTACAATGAATTAATCATGGTATTGAGTGTTCCAATATCAAACTTCACATTC
ATTGCACCTAATTTCTGGAACATGGCGATCGCTTCGTCTGCACAATTATTTCTACAAAGGCCTTTAAGTATTATATTGTA
TACGGGAATGTCCACTGTCGTTTCACTTTCGATCATCTCATGGAACATTTTCCTTGCAACGACAGTTCTTGCAGCATGAA
ACAACCCATCTAGTATGATGCCATATGTAACAGTGTCAGGTTTTATTCTCTTATGTGGCATTTCCCTGAACAGAGTCAAA
CCATCATCGATCCTTCCATTTCTACAATAGCCATTAACAAGCGTGTTGTATGTAACAATATCAGGCTCAGCACCAACTGA
TTTCATGGCATCAAGTACTCCAAATGCTTTATCCATCTCGCCAACTAAGCAATATCCATCAATCAGTGAATTAAATGTAA
TGATATTAGGCCTCTCATCTATGGCAGTAACCAAGTCAAAGACATCTTGTGCATCCATAACTCCTCCTTCTTTGCATAGA
GTGTTTATTATTGAATTGAAGAAC-GCAATGTCAGGACGAGGAATACCTTTGTTCATCATTTCAGAAACCAGCCCCTTAG
CTTTAACCAAATCACCATGCATACAAAAACCCTGAATTAGGGAGTGATAAACAGTTGTGTCCGGCTGAAAACCCATATCA
GTCATCTCATTGAACTTGTCCATAGCATTGGCCAGCCTACGCAATCTGCAAAATGCGGCTATTACAGTGGAATAGGTGAC
TACATCGGGACCCACTCGTTGGCTTTGGGCTGATCATTCTGCAGATGAATTAGTGCAACTTACGATCTCATATACTTCAT
CAGTGAAGAATATGATATCAAGTTCATCAGATGAATTTCATCAATCAGTAAAACAGATATTTCAGTATGAGGACATGTGA
AATGAAAGTTCATTTCATCATGATTCGCCTGCGTCCTTTCAGGCAATTTTTGTCAGGCCTCCAGCAAATTC-TCAGACAT
TTAAGGCACGTCTGGAGACCTTACCCTGCATAAGAGATTAGTTCCTTTTCTTCACCACCCACATCTGAAGGGGTGGCAAA
GAGTTCATCACTCTGCGAGCATCATATGAGAAAGGTGGCATTGAGGCCAATCCATTTTGTTTCACATAAGAGGGGTTAGG
GAAAGCATATGAATAAGCAGAGAAATTCTTCGAGGACTTATA
>chr1B_1
AGGTAGTTCTTTTTATACATCTGTGTGTATCTGAAGTGGAGAGGTGTAAAGCAAGGTGAACCAACGCGAGGCTGACGGCA
GCTCTCCTCCCAAACATAACATCAGCAACCTCAATCATCGATGCTTCCAGGACCCATTTGCCCGAAATACAAAACAGATT
GCACAAACGAAAAGTAAATCCACCCTTTGCATACATATCAGATCTGGGAATGAAGGAAAGTGGCAGTTTTGGAGAGATTA
CATATTCTTAGGTGGCTGCTAGAAAAGATTGTATTGGTACTCGTTGTGCTTACATTCCACAATCACCATTAGAAGCTATT
ACCCCCAAAACTGCAACCATTTGTGTTAGACTACTGGGTCTACCTTTCCTCACCCATTGAAGATTAAATACT-CATAGAC
ATTTCACAATCTTGTGATCTTGGCAAACCGCAAAATGTACTCAATGAAATACGAGGTG-TCTACTTTTTACAAGCAGGCA
CTTTGGAAATCTTATACTGGCAGGAAGG--TTGTGACAAGCAAATAGTTCGACTCTACTGAGATAGCCTCATATGCAATG
CCTCAGCTAGTCAACCAAATCCATAAAAAAACTGATACTTTGCAGGAAGCAATTTAATATTCTCTTGATATTTCCTGCTC
CTCGAAAAGAGAGACAACATCAGCGACGTAGTTGAAGCTTCAAGTAAGATGTTCTTCTCATCAACCTTGGACAAATAATA
TCCAGCCTTGGCGGTCTCACCTTTTTCCAACAACATTCTGATGATATTTTCTCAAAAAAACAACATTCTGATGATATAGT
TTATAAGACGAGAGCTGGGAGCTATACCACTCTTGTCCATTGATGAAAAAAATATGCTTAGCATCTTCCACTGATCCTTC
CTTCAGATAATTTATTATCATTATGCTGTAAGTAGAAGCATTAGGCACCAACCTGCTGGCTGATATTGCAGCAAACAAAT
CCTTAGCTTCTTCTTTTCTTCCAACCTTGTACAATGAATTAATCATGGTATTGAGTGTTCCAATATCAAACTTCACATTC
ATTGCACCTAATTTCTGGAACATGGCGATCGCTTCGTCTGCACAATTATTTCTACAAAGGCCTTTAAGTATTATATTGTA
TACGGGAATGTCCACTGTCGTTTCACTTTCGATCATCTCATGGAACATTTTCCTTGCAACGACAGTTCTTGCAGCATGAA
ACAACCCATCTAGTATGATGCCATATGTAACAGTGTCAGGTTTTATTCTCTTATGTGGCATTTCCCTGAACAGAGTCAAA
CCATCATCGATCCTTCCATTTCTACAATAGCCATTAACAAGCGTGTTGTATGTAACAATATCAGGCTCAGCACCAACTGA
TTTCATGGCATCAAGTACTCCAAATGCTTTATCCATCTCGCCAACTAAGCAATATCCATCAATCAGTGAATTAAATGTAA
TGATATTAGGCCTCTCATCTATGGCAGTAACCAAGTCAAAGACATCTTGTGCATCCATAACTCCTCCTTCTTTGCATAGA
GTGTTTATTATTGAATTGAAGAAC-GCAATGTCAGGACGAGGAATACCTTTGTTCATCATTTCAGAAACCAGCCCCTTAG
CTTTAACCAAATCACCATGCATACAAAAACCCTGAATTAGGGAGTGATAAACAGTTGTGTCCGGCTGAAAACCCATATCA
GTCATCTCATTGAACTTGTCCATAGCATTGGCCAGCCTACGCAATCTGCAAAATGCGGCTATTACAGTGGAATAGGTGAC
TACATCGGGACTCACTC---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
>chr1A_210
ATA-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------AAGGAAAATGACTGTTTTAGAGAGATTG
CAAAATCTCAGGAAGCTACTACAAAAGATTGCATTAGTATTCATTGTGGTTACCTTCCCTAATCGCAATCAGAAGCCATT
AGCCCCAAAATTGCAACCATTCAT----GACTACTTGGTCTAACTTTCCTCACCCATCAAAGATCAAAAGTTCCATAGTC
ATTTCAAATTCTTGTGGTTTTGACACACCGCAGAATGAACTCAATGAAATAGTGACAGATCTACTTTCTGCAAGCAGGCA
ATCTGGATATCTTTTACTGGCAGGAGGGCCTTGTGGAAAGCAAAAGGTTCAACAATGCTGAGTTAGCCACATAGACAATG
CATCAACTAATCAACCAAATCCAATGAAAAATTGATACTTTGCAGGAAGCAATTCAATGTTTTCCCGATATTTCCCTTCC
CTTGAAAAGAGAGACAACAACAAAGAAGTAGTTGAAGCTTCAAGTGAGATGATCTTCCCATCAACTTTAGATAAATAATT
CCCAGCCCTGGCAATCTCACCTTTTTCCAACA------------------------------ACATTCTGATGATACAAT
TTATAAGACGAGAGCTGGGAGCACAACCACTCTTCTCCATTGATGAAAACA-TATTGTCAACTTCTTCCACTGATCCTTC
TTTTAGAATATTTTCTATCATTATGCCGTAAGTAGAAGCATTAGGCACCAACCCACTGGCTGATATTGCAGCAAACAAAT
CATTAGCTTCTTCTCTTCTCCGAACCTTGAACATTGCATTAATCATGGTATTGAGTGTTATAATATCGAACTTGACATTC
ATTGCTCCTAATTTCTGAAATAGTGTGATTGCTTCGTCTGCACAATTATTTCTACAAAGACCTCCAAGTATTATATTGTA
TATGGAAATGCTCACTGGTATACCCCCTTCGATCATCTCATCGAACATTTTCCTTGCAGCAACAGTTCTCCCAGCACGGA
ACAACCCATGCAGTATGATGCCATATGTAACAGTGTTAGGTTTAATTCTCTTGCGCGGCATTTCTCTGAATAGAATCAAA
GCATCATCGATCCTTCCATTTCTACAATAGCCATCAAGAAGTGAACTATACGTAACAACATTAGGCTCAATGCCAGCTGA
TACCATGGCATCAAGCACTCCAAATGCTTTATCCATCTGGCCAATTAAGCCATATCCATCAATCAGTGAGTTAAATGTAA
TGACGTCAGGTCTCTCATCTATGCTTATAACCAATTCAAAGATATCTTGTGCATCCATAACTCTTCCTTCTTTGCATAGA
CTGTTTATTATTGAACTGAAGAAC-GCAATGTCAGGACGAGGAATACCTTTGTTCATCATTTCAGACACCAACTCCTTAG
CTTTAACCAAATCACCAAGCATACAAAAACCCTGAATTAGGGAGTGATAAACAACTGTGTTCGGCTGAACACCCATATCA
GTCATCTCATTGAACCTGTCCATAGCATCGGCCAGCCTACCCAATCTGCAAAGTGCGGCTATTACAGTGTAATAGGTGAA
TACATCGGGACTCACTC---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
>chr1D_210
ATA-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------AAGGAAAATGACTGTTTTAGAGAGATTG
CAAAATCTCAGGTAGCTGCTACAAAAGATTGCATTAGTATTCATTGTGGTTACCTTCCCTAATCGCAATCAGAAGCCATT
AGCCCCAAAATTGCAACCATTCAT----GACTACTTGGTCTAACTTTCCTCACCCATCAAAGATCAAAAGTTCCATAGTC
ATTTCAAATTCTTGTGGTTTTGACACACCGCAGAATGAACTCAATGAAATAGTGACAGATCTACTTTCTGCAAGCAGGCA
ATTTGGATATCTTTTACTGGCAGGAGGGCCTTGTGGAAAGCAAAAGGTTCAACAATGCTGAGTTAGCCGCATAGACAATG
CATCAACTAATCAACCAAATCCATTGAAAAATTGATACTTTGCAGGAAGCAATTCAATGTTTTCCCGATATTTCCCTTCC
CTTGAAAAGAGAGACAACAACAAAGAAGTAGTTGAAGCTTCAAGTGAGATGATCTTCCCATCAACTTTAGATAAATAATT
CCCGGCCCTGGCAATCTCACCTTTTTCCAACA------------------------------ACATTCTGATGATATAAT
TTATAAGACGAGAGCTGGGAGCACAATCACTCTTCTCCATTGATGAAAACA-TATTGTCAACTTCTTCCACTGATCCTTC
TTTTAGAATATTTTCTATCATTATGCCGTAAGTAGAAGCATTAGGCACCAACCCACTGGCTGATATTGCAGCAAACAAAT
CGTTAGCTTCTTCTCTTCTCCGAACCTTGAACATTGCATTAATCATGGTATTGAGTGTTATAATATAGAACTTGACATTC
ATTGCTCCTAATTTCTGGAATAGTGTGATTGCTTCGTCTGCACAATTATTTCTATAAAGACCTCCAAGTATTATATTGTA
TATGGAAATGCTCACTGGTATACCCCCTTCGATCATCTCATCGAACATTTTCCTTGCAGCAACAGTTCTCCCAGCACGGA
ACAACCCATCCAGTATGATGCCATATGTAACAGTGTTAGGTTTAATTCTCTTGCGCGGCATTTCTCTGAATAGAATCAAA
GCATCATCGATCCTTCCATTTCTACAATAGCCATCAAGAAGTGAACTATACGTAACAACATTAGGCTCAATGCCAGCTGA
TACCATGGCATCAAGCACTCCAAATGCTTTATCCATCTGGCCAATTAAGCCATATCCATCAATCAGTGAGTTAAATGTAA
TGACGTCAGGTCTCTCATCTATGCTTATAACCAATTCAAAGATATCTTGTGCATCCATAACTCTTCCTTCTTTGCATAGA
CTGTTTATTATTGAACTGAAGAAT-GCAATGTCAGGACGAGGAATACCTTTGTTCATCATTTCAGACACCAACTCCTTAG
CTTTAACCAAATCACCAAGCATACAAAAACCCTGAATTAGGGAGTGATAAACAACTGTGTTCGGCTGAACACCCATATCA
GTCATCTCATTGAACCTGTCCATAGCATCGGCCAGCCTACCCAATCTGCAAAGTGCGGCTATTACAGTGTAATAGGTGAA
TACATCGGGACTCACTC---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
>chr1A_333
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------GCAACCATTTGTGTTAGACTACTTGGTCTACCTTTCCTCACCCATCGAAGATTAAATACT-CATAGAT
ATTTCACAATCTTGTGATCTTGACACCCCACAAAATGTACTCAATGAAATACGAGGTG-TCTACTTTTTACAAGCAGGCA
CTTTGGATATCTTATACTGGCAGGAAGGCCTTATGACAAGAAAATAGTTCGACTGTACTGAGATAGC-------------
---CAGCTAGTCAACCAAATCCATAAAAAAACTGATACTTTGCAGGAAGCAATTTGATATTCTCCTGATATTTCCCGTTT
CTTGAAAAGAGAGACAACATCAGCGACGTAGTTGAAGCTTCAAGTAAGATGTTCTTCCCATCAACCTTGGACAAATAATC
TCCAGCCTTGGCGATCTCACCTTTTTCCAAATAT------------------------------ATTCTGATGATATAAT
TTATAAGACGAGAACTGGGAGCTATGCCACTCTTCTCCATTGATGAAAAAA-TATTGTTAGCATCTTCCACTGATCCTTC
CTTCAGATAATTTATTATCATTATGCTGTAAGTGGAAGCATTAGGCACCAACCCGCTGGCTGATATTGCAGCAAACAAAT
CCTTAGCTTCTTCTTTTTTTCCAACCTTGTACAATGCATTAATCATGGTATTGAGTGTGACAATATCAAACTTCACATTC
ATTGCACCTAATTTCTGGAACATGGCTATCGCTTCGTGTGCACAGTTATTTCTAGAAAGGCCTTTAAGTGTTATATTGTA
TATGGGAATGCCCACTGTTGTTCCACTTTCGATCATCTCATGGAACATTTTCCTTGCAACGACAATTCTCCCGGCATGAA
ACAACCCATCTAGTATGATGCAATATGCAACAGTGTCAGGTTTTATTCCCTTACATGGCATTTCCCTGAACAAAGCCAAG
TCATCGTCAATCCTTCCATTTCTACAATAGCCATTAACAAGTGTATTGTATGTAACAATATCAGGCTCAGCACCAACTGA
TTTCATGGCATCAAGTACTCTGAATACTTTATCCATCTCGCCAACTAAGCAATATCCGTCAATTAGTGAATTAAATGTAA
TGACATTAGGCCTCTCATCTATGGCAACAAGCAAGTCAAAGATATTTTGTGCATCCATAACCCTTCCTTCTTTGCATAGA
CTATTTATTATTGAAGTGAAGAAC-GCAATGTCAGGACGAGGAATACCTTTGTTCATCATTTCAGAAACCAGCTCCTTAG
CTTTAACCGCATCACCATTTATACAACAAACCTGAATTAGGGACCGCTAAACAGGTCTGTTTGGCTGTACTCCAATGGCA
ATCATCTCATCGAATTTGTCAATAGCATCGGCCAGTCTACTCGTTCGAAAAAGTGAGACTATTACAGTTGTATAGGTGAA
TACATCCGGACTCACTCCTTG-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
>chr1B_426
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------ACCGCAGAATGAACTAAATGAAATAGTGACGGATCTACTTTCTGCAAGCAGGCA
ACTTGGATATCTTATACTGGCAGGAGGGCCTTGTGTAAAGCAAAAGGTTCAACAATGCTGAGTTAGCCGCATAGACAATG
CATCAACTAGTCAACCAAATCCATTGAAAAATTGATACTTTGCAGGAAGCAATTCAATGTTTTCCCGATATTTCCCTTCC
CTTGAAAAGAGAGACAACAGCAAAGAAGTAGTTGAAGCTTCAAGTGAGATGATCTTCCCATCAACTTTAGATAAATAATT
CCCGGCCCTGGCAATCTCACCTTTTTCCAACA------------------------------ACATTCTGATGATATAAT
TTATAAGACGAGAGCTGGGAGCACAACCACTCTTCTCCATTGATGAAAACA-TATTGTCAACTTCTTCCACTGATCCTTC
CTTTAGAATATTTTTTATCACTATGCCGTAAGTAGAAGCATTAGGCACCAACCCACTGGCTGATACTGCAGCAAACAAAT
CGTTAGCTTCTTCTCTTCTCCGAACCTTGAACATTGCATTAATCATGGTATTGAGTGTTATAATATCGAACTTGACATTC
ATTGCTCCTAATTTCTGGAATAGTGCGATCGCTTCGTCTGCACAATTATTTTTACAAAGACCACCAAGTATTATATTGTA
TATGGAAATGCTCACTGGTATACCCCTTTCGGTCATCTCATGGAACATTTCCCTTGCAGCAACAGTTCTCCCAGCACGGA
ACAACCCATCCAGCATGATGCCATATGTAACAGTGTTAGGTTTAATTCTCTTGCGCGGCATTTCTCTGAATAGAATCAAA
GCATCATTGATCCTTCCATTTCTACAATAGCCATCAAGAATTGAACTATATGTAACAACATTAGGCTCAATGCCAGCTGA
CACCATGGCATCAAGCACTCCGAGTGCTTCACCCATCTGGCCGACTAAGCCATATCCGTCAATCAGTGAACTGAATGTAA
TGACATTAGGCCTCTCGCCCATGCCTATAACCAAGTCAAAGATACCTTGTGCATTCATAACCCTTCCTTCTTTGCATAAA
GAGTTTATTACTGAATTGAAGAAC-GCAATGTCAGGACGAGGAATACCTTTGTTCATCATTTCAGACACAAATTCCTTAA
CTTTAACCAAATCACCATGCATACAAAAACCCTGAATTAGGGAGTGATAAACAGTTGTGTCCGGCTGAACACCCATATCA
GTCATCTCATTGAACTTGTCCATAGCATTGGCCAGCCTACGCAATCTGCAAAATGCGGCTATTACAGTGGAATAGGTGAC
TACATTGGGACTCACTC---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
>chr1D_510
TG------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------AAAGCAAAAAGTTCAACTTTGCTGAGTTAGCAGCATATGCAATG
CGTCAACTAGTCAACCAAATCCATCGAAAAATTGATAGTTTGCAGGAAGCAATTCAATGCTTTCCCGATATTTCCCTTTC
CTTGAAAAGAGAGACAGCAACAAAGAAGTAGTTGAAGCTTCAAGTGAGATGACCTTCCCATCAACTTTAGATAAATAATT
TCCGGCCTTGGCAATCTCACCTTTTTCCAACA------------------------------ACATTCTGATGATAATAT
TTATAAGACAGGAGTTGGGAATTATACCACTCTTCTCCATTGATGAAAACA-TACTGTCAACTTCTTCCACTGATCCTTC
TTTTAGAATATTTTTTATCATTATGCCGTAAGTAGAAGCATTAGGCACCAACCCACTGGCTGATATTGCAGCAAACAAAT
CGTTAGCTTCTTCTCTTCTCCGAACCTTGAACATTGCATTAATCATGGCATTGAGTGTTATAATGTTGAACTTTACATTC
ATTGCTCCTAATTTCTGGAACAGTGCGATCGCTTCATCTGCACAATTATTTCTACAAAGACCTCCAAGTATTATATTGCA
TATGGAAATGCTCACTGTTATACCCCTTTCGATCATCTCATGGAACATTTTCCTTGCATCAACAGTTCTTCCAGCACGAA
ACAACCCATCCAGTATGATGCCATATGTAACAGTGTTAGGTTTAATTCTCTTACGCGGCATTTCTCTAAATAGAATCAAA
GCATCATTGATCCTTCCATTTCTACAATAGCCATCAAGAAGTGAACTATACGTAACAACATCAGGCTCAATGCCAGCTGA
TACCATGGCATCAAGCACTCCGAGTGCTTTACCCATCTGGCCGACTAAGCCATATCCGTCAATCAGTGAACTGAATGTAA
TGACATCAGGTCTCCCATCTATGCTTATAACCATTTCAAAGATATCTTGTGCATCCATAACCCTTCCTTCTTTGCATAGA
GTGTTTATTATTGAACTGAAGAAC-GCAATGTCAGGACGAGGAATACCTTTGTTCGTCATTTCAGAAACCAGCCCCTTAG
CTTTAACCAAATCACCATGCATACAAAAGCCCTGAATTAAGGAGTGATAAACAGTTGTGTCCGGCTGAACACCCATATCA
GTCATCTCATTGAACTTGTCCATAGCATCGGCCAGCCTACGCAATCTGCAAAATGCGGCTATTACAGTGGAATAGGTGAC
TACATCAGGACTCACTC---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
>chr1B_777
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------CAAAATTCTGATAATACTAT
TTATAAGACGAGAGCAGGGAGCTATACCATTCCTGTCCATTGCTGAGAACA-TATTGTTAGCATCTTCCACTGCTCCATC
TTTTAGAATATTTATTATCATTACTCCATAAGTCGAAGCATTAGGAACCAACCCACTCGCTGATATAGCAGCAAACAAAT
CTTTAGCTTCCTCTTTTCTTTTAACCTTGTACATTGCATTGATCATGGTATTGATTATTGAAATATTGAACTTCACATTC
ATTGCAACTAATTTCTGGTACAGGTCGATCGCTTCTTCTGCACAATTGTTTCTAGAAAGACCTGCAAGTATAATATTGTA
TGTGGAAATGCTCACTGTTATTCCGCTTTCGATCATATCATGGAACATTTTCCTTGCAGCAACAGTTCTCCCAGCACGAA
ACAACCCATCCAGTATGATCCCATATGTGGCACTGTCAGGTTTTATTCTCTTACGTGGCATTTGTCTGAACAGAGTCAAA
CCATCATCGATCCTTCCATTTCTAGAATAGCCATTAACAAGTGTATTATATGTAACAACATTAGGCTCAATGCCAGCTGA
CAACATGGCATCAAGTACTCCAAATGCTTTATCCATCTTGCCGACTAAGCAATGTCCGTCAATCAGTGAGTTAAATGTAA
TGACATCAGGCTTCCCATCTATGATTATAACCAATTCAAAGATATCTTGTGCATCCATAATCCTTCCTTCTTTGCACAAA
TAGTTTATAACTGAATTGAAGAAC-ACAATGTTGGGACGAGGAATACCTTTGCTTATCATGTCAGAAACTAACTCCTTGG
CTTTACCCAAATCACCATGCATACAAAAACCCTGAATTAGGGAGTGATAAACAGCTGTGTTCGGCTGTACACCCATATCA
GTCATCTCATTGAACCTGTCCATAGCATCGGCCAGCCTACCCAATCTGCAAAGTGCGGCTATTACAGTGGCATAGGTGAC
TACATTGGGACTCACTC---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
>chr1D_777
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------CAAAATTCTGATAATACTAT
TTATAAGACGAGAGCAGGGAGCTATACCATTCCTGTCCATTGCTGAGAACA-TATTGTTAGCATCTTCCACTGCTCCATC
TTTTAGAATATTTATTATCATTACTCCATAAGTCGAAGCATTAGGAACCAACCCACTCGCTGATATAGCAGCAAACAAAT
CTTTAGCTTCCTCTTTTCTTTTAACCTTGTACATTGCATTGATCATGGTATTGATTATTGAAATATTGAACTTCACATTC
ATTGCAACTAATTTCTGGTACAAGTCGATCGCTTCTTCTGCACAATTGTTTCTAGAAAGACCTGCAAGTATAATATTGTA
TGTGGAAATGCTCACTGTTATTCCGCTTTCGATCATCTCATGGAACATTTTCCTTGCAGCAACAGTTCTCCCAGCACGAA
ACAACCCATCCAGTATGATGCCATATGTAGCACTGTCAGGTTTTATTCTCTTACGTGGCATTTGCCTGAACAGAGTCAAA
CCATCATCGATCCTTCCATTTCTAGAATAGCCATTAACAAGTGTATTATATGTAACAACATTAGGCTCAATGCCAGCTGA
CACCATGGCATCAAGTACTCCAAATGCTTTATCCATCTTGCCGACTAAGCAATATCCGTCAATCAGTGAGTTAAATGTAA
TGACATCAGGCTTCCCATCTATGCTTATAACCAATTCAAAGATATCTTGTGCATCCATAACCCGTCCTTCTTTGCACAAA
TAGTTTATAACTGAATTGAAGAAAAACAATGTTGGGACGAGGAATACCTTTGCTTATCATGTCAGAAACTAACTCCTTGG
CTTTAACCAAATCTACATGCATACAAAACCCCTGAATTAGGGAGTGATAAACAGTTGTGCCCGGCTGAACACCCATATCA
ATCATCTCATTGAACTTGTCCATAGCATCGGCCAGCCTACCCAATCTGCAAAGTGCGGCTATTACAGTGGAATAGGTGAC
TACATTGGGACTCACTC---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
>SNPs
---------------------------------------------S----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------S------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------S---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------S------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------S------------------------------------------
--------------------------------------------------------------------------------
----------------------------S------------------------------------------S--------
---------------------S-------------------S-----------------------SS-------------
---------------------S----------------------------------------------------------
-S----------------------------------------
>forward_46
----------------------GTGTGTATCTGAAGTGGAGAGGTA----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
>reverse_2042
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------CTCCTTTTCTTCACCACCCAC------------------
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