>input_sequence_87094
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----------------------------------------------------------ATGGAGTCACCGGCGAGCTCAT
GCGTGTCGTCAGATGCAGAGGTGGAGATGCCGATGGTGGTCGCTGGATGCCCCCAGTGCCTCATGTACATGATGCTCTCG
GATTCAGAAGAAGAGAAGCAACCCAAGTGCCCCAGGTGCAAGAGCCCCGTGTTGCTGCACTTCCACAAGTACTGGGACAC
GAAGAATAAGACCTAA----------------------------------------------------------------
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>chr7D_1_TraesCS7D01G324300
ACACTTTATCAAGAAGGC-CCATATTCATGATTCCATGGTCTTGCATTCGTA-TTTTTTGTCCAGCCGAGCTACTTAGTT
TA-TCACAAATCACG-ATCCATATATCTTTTCAGATTACTGAAATTCGGTAGGTCAGTTTGTTAAACTATTTNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNTAACTGCAACTGTTCT-----------------------------------------------------------
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--------------------CTCATTCAAGGATTAGGTATATACCAGTACAACTGTCTCAACCAAACAATCTTAATGTAC
CAAAGCCTTATTTTTGTTCCAACCAGGTGAACCCCTTTCCATTAATTGCTCAGTGCAAACAACCAGTATTTACAGCAGCA
AAGGAAATGGGAAAGGGAGTTGTGTATCCTCCTGGAAACTTTTTGCTAAATGTAAAAGAAGTC------CCAACTGCTAA
CTTTTCTTGAACTACTAGTGTACCATCCTTCATTTGAATGCCCACGCGTGGAAGGAGAAAGTCTTTCAATCATAATGAAA
CTTCACCTCAGCTGCAATGATTTTGACCTCCAATCTCTTGTCTGCTTAAGGAAATCTAAGGA--GTTTTTATGTTAGGAT
GCGCTCTTCCTTTCCCAAGCCATTATATAATGTTCTGGCAGTGGGAGGTGCACCACACGACCACAGTTCTCAGTTTCTCA
CACACCACAGAACAGATACAGAGGGGCTCCTCTCTTCCTCTTCCTCTAG-------CCACTTATACTGCACTCTAGCTAG
CTTGACACCACTTAGTAAGCCAAGCATGAGCCAGATAACAACGAGCGGTGAAGTGTCCATGGAGTCACCGGCGAGCTCAT
GCGTGTCGTCAGATGCAGAGGTGGAGATGCCGATGGTGGTCGCTGGATGCCCCCAGTGCCTCATGTACATGATGCTCTCG
GATTCAGAAGAAGAGAAGCAACCCAAGTGCCCCAGGTGCAAGAGCCCCGTGTTGCTGCACTTCCACAAGTACTGGGACAC
GAAGAATAAGACCTAATTGCCAAAACATCTGGCGTGTAGATAAATAATCCCTCCGTCCCAAAATAACTGTCTTAACTTTG
GTATAAAGTTGTACTAAAGTTGAGACACTTATTTTGAGACGGAGGGAGCATATGCAGTTTGGCTGTGTGGATCCGAGGAT
GCAAAGGCCG-----------------------AAAAAATCATATG-CAGTTAGCCTTTGGTGTTTGCTATCTGCAGTGT
TGCGTTGAGTAGCTCATGAAAGATTGAGGTGTGTTTCTTCTCATCTCTCATCTCTTGCTGGCCTCTCAATCACAGTGTCC
CATGAACCAGTATGATATACTCCCTCTGTCCGGAATTACTTGTCGCAGAAATGGATACAAATGGATATATCTAGAACCAA
AATACGTCTAGATACATCCATTTTTTC----GATAAGTATTTCTGGACAGAGGGAGTA-------CTAGCTAGTAACTGG
GGGAGCTGATGAACTTCTGTTGTTTACCCTAATCCCTTCCTTGTGACTCTGAGATCATGTATACTGTAATACATACCATG
CCTTCGTCTTCAGCGAGGCGTATTCCTTTTTCGCCTTTCTTGAACAAGTCAGATTTCTCTCTTGGATTATCCATACCTAG
GATTGTTCTTGTGTTATTGTATGTTAGTTTAGTTCATTTTAAGTACAGATATACATAGTCATGTAAGAGCAAACTTTCTC
-AAAAATAAAATAAAACAAGAGCAAACTCTCCTTTTTACTGAAAAAAGGTTGCCCCTGCTTTGTATTTCAAAACAACCAA
CACCGTACACATAGCATTGCTGGGGCGAGCAGCATATCAAGCCCAAAAGCAAAAGAAGAAACAAATGCCAACAACGGCAG
CTCGTCAAAGCGCGGATGACCCGCCACCGCTGCGCCCTCCGGAGACAAACCACCACAACCCGAGGCTCCGATCTGGCACG
TACCAAGCAGCACCTTCAAGAAGGGATGCGGCGCCGACGACGCTGCTGCCCAGACGAGTCCTAGGGTTTCCCCGGCACGT
GGAGGGAAGTTG
>chr7A_1
ACACTATATCAAGTAGGCACCATACTCATGATTCCAGGGTCTTACATTTGTATTTTTTTGTCCAGCCGAGCTACTTAGTT
TAATCACAAATTTGCTATCCATATATCTTTTCAGATTACTGAAATTCGGTAGGTCGGTTTGTTAAGCTATTTTTTTGGTG
TGTGTGTTTGGGGGGGAGGGGGGGGGGTGGTTGTTATATTTTCTGA----------------------------------
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-----TAACTCCAACTGTTCT-----------------------------------------------------------
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--------------------CTCATTCAAGGGTTAGGTATATGCCAGTACAACAGTCTCAACCAAACAATCTTAATGTAG
CAAACCCTTATTTTTGTTCTAACCAGGCGAACCCCTTTCCATTAATTGCTCAATGCAAATAACCAGTATTTACAGCAGTA
AAGGGAATGGGAAAGGGAGTTGTGTATCCTCCTGGAAACTTTTTGCTAAATGTAAAAGAAGCC------CCAACTGCTGA
CTTTTCTTGAACTACTAGTGTACCATCCTTCATTTGAATGCCCACGCGTGGAAGGAGAAAGTCTTTCAGTCATAAGGAAA
CTTCACCTCAGCTGCAATGATTTTGACCTCCAATCTCTTGCCTGCTTAAGGAAATATAAGCA--ATTTTTATTTTAGGAC
GTGCTCTTCCTTTCCCAAGCCATTATATAAGGTTCTGGTAGTGGGAGGTGCACTGCACGACCACAGTTCTCAGTTTCTCA
CACACCACAGAACAGCTACAGAGGGGCTCCTCTCTTCCTCTTCCTCTAG-------C-------ACTGCACTCTAGCTAG
CTTGACACCACTTAGTAAGCCAAGCATGAGCCAGATGACAACGAGCGGTGAAGTGTCCGTGGATTCGCCGGCGAGCTCAT
GCGTGTCGTCGGATGCGGAGGTGGAGATGCCGATGGTGGTCGCTGGATGCCCCCAGTGCCTCATGTACATGATGCTCTCG
GATTCAGAAGAAGAGAAGCAACCCAAGTGCCCCAGGTGCAAGAGCCCCGTGTTGCTGCACTTCCACAAGTACTGGGACAC
GAAGAACAAGACCTAATTGCCAAAACATTTGGCGTGTAGATAAATAATCCCTCCGTCCCAAAATAAGTGTCTCAACTTTA
GTATAAAGTTGTACTAAAGTTGAGACACTTATTTTTGGACGGAGGGAGTATATGCAGTTTGGCTATGTGCATCTGAGGAT
GCAAAGGCCGGAAGGTTTAACCTTCCTTTTCGAAAAAAATCATATG-CAGCTAGCCTTTGGTGTTTGCTATCTGCAGTGT
TGCGTTGAGTAGCTCATGAAAGATTGAGGGGTGTTTCTTCTCATCTCTCATCTCTCGCTGGCCTCTCAATCAGAGTGTCC
CATCAACCAGTATGATATACCCCCTCTGTCCGGAATTACTTGTCGCAGAAATGGATAAAAATGGATGTATGTAGAACCAA
AA--CGTCTAGATACATCCATTTCTCC----GACAAGTATTTCTGGACAGAGGGAGTA-------CTAGCTAGTAACTGG
GGGAGCTGATGAACTTCTGTTGTTTACCCTAATCCCTTCCTTCTGACTCTTA-ATCATGTATACGGTAATACATACCATG
CCTTCGTCTTCAGTGAGGCATATTCCTTTTTCGCTTTTCTTGAACGAGTCAGATTTCTCTCTTGGATTATCCGTGCCTAG
GATTGTTCTTGTGTTATTGAATGTT-------------------------------------------------------
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>chr7B_1
ACACTTTATCAAGTAGACACCATATTCATGATTCCAGGGTCTTGCATTTGTATTCTTTTGTCCAGCCGAGCTACTTAGTT
TA-TCACAAATTCACGAAACATATATCTTTTCAGATTACTGAAATTCGGTAGGCAGTTTGNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNCTCATTCAAGGGTTAGGTATATACCAGTACAACAGTCTCAAGCAAACAATCTTAATGTAG
CAAAGCCTTATTTTTGTTCCAACCAGGCGAACTCCTTCCCATTAATTGCTCAATGCAAATAATCAGTATTTACAGCAGCA
AAGGGAATGGGAAAGGGAGTTGTATATCCTCCTGGAAACTTTTTGCTAAATGTAAAAGAAGTCCCAAGTCCAACTGCTAA
CTTTTCTTGAACTACTAGTGTACCATCCTTCATTTGAATGCCCACGCATGGAAGGAGAAAGTCTTTCGGTCATAAAGAAA
CTTCACCTCAGCTGCAATGATTTTGACCTCCAATCTC-TGTCTGCTTAAGGAAATCTAAGGAGTATTTTTATTTTAGGAT
GTGCTCTTCCTTTCGCAAGCCATTATATAATGTTCTGGCAGTGGGAGGTGCACCGCACGACCACAGTTCTCAGTTTCTCA
CACACCACAGAACAGATACAGAGGGTCTCCTCTCTTCCTCTTCCTCTAGCCACTTAC-------ACTGCACTCTAGCTAG
CTTGACACCACTTAGTAAGCTAAGCATGAGCCAGATAATGACGAGCGGTGAAGTGTCCATGGATTCGCCGGCGAGCTCAT
GCGTGTTGTTGGATGCAGAGGTGGAGATGCCGATGGTGGTCGCTGGATGCCCCCAGTGCCTCATGTACATGATGCTCACG
GATTCAGAAGAAGAGAAGCAACCCAAGTGCCCCAGGTGCAAGAGCCCCGTGCTGCTGCACTTCCACAAGTACTGTGACAC
GAAGAACAAGACCTAATTGCCAAAACATCTGGCGTGTAGATAAATATATGCAGC--------------------------
---------------------------------------------------------TATGGCTGTGTGCATCTGCGGAT
GCAAAGGCCGGAAGGTTTAACCTTCCTTTTCGAAAAATAATTATAGACAGCTAGCCTTTGGTGTTTGCTATCTGCAGTGT
TGCGTTGAGTAGCTCATGAAAGGTTGAGGGGTGTTTCTTCTCATCTCTG-------GCTGGCCTCTCAATCAGTGTCCAC
AATCATTAACCAG----TACTCCCTCCGTCCGAAAAAGCTTGTCCCT----------CATATGGATGTATCTAGCACCAA
GTTAGTGCTACCATTTGAGAAATAAGCTTGGGACAAGTTTTTCCGGACGGAGGGAGTATGATATACTAGCTGGTAATTGG
GGGACCTGACGAATTTTTGTTGTTTACCCTACTCCCTTCCTTGTGACTCTGAGATCATGTATACGGCAATACATACCATT
T------------------------CTTTTTCGCTTTTCCTGAACGTGTCAGATTTCTCTCTTGGGTTATCCATACCTCG
GATTGTTCTTGTGTCATTGTATGTTAGTTTAGTTCATTTTAATTACAGATATACATGGTCATATAAGAGAAAACTTTCTG
AAAAAATAAAATAAAATAAGAGCAAACTCTCGTT----------------------------------------------
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>SNPs
-------------S----------------------S-----------S-------------------------------
-----------SSSS----------------------------------------S---------S--------------
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----------S---------------------------------------------------------------------
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-------------------------------S---------------------S-------------------------S
---------------------------S------------------------S------S--------------------
----S---------------------------------------------------------------------------
--------------------------------------------------------------------S------S----
----------------------------------------------------------------S-------S-------
-S----------------------------------------------------S-------------------------
---------------------------------------------------------SSSSSSS----------------
---------------------------------------------------------------S--S-------------
----------S---------------------------------------------------------------------
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------S-----------------------------------------------------------S-----S------S
-----------------------------------SS-----------S--------------------S---S------
--------------------------------------------------S-----------------------------
-----------------------------S-------------------------S----------------S-------
---S--------------------------------------------------------------S-------------
-----------------------S-S-------S----------------------------------------------
----------------------------------------------------------------S---------------
-------------S-----S--------------S----------S----------------------------------
------------------------------------------S-------------S-----S------S---------S
----------------S--------------S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSS
>forward_1101
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---------------------------------------TCTTCCTCTTCCTCTAGCCACT-------------------
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>reverse_2332
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-----------ACCTTCAAGAAGGGATGCGG-------------------------------------------------
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