>input_sequence_87088
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---------------------------------------------------------ATGGCGAAGACGTCGTGGCCTGA
GGTGGTGGGGTGGCCGGAGCTGAACGCGGCGGACCAGATCAACATCGACCGGCCGGACGTGTCGGTGGGGTTCTACATGG
AGGGCTCCCCGCTGCCGTCCGGGTACGACCCCCGGCGCGTAGTCATCATCGTCAACGCGTCCGGCGTGGTCATCAGGACC
CCAGTCGTCGGCTAG-----------------------------------------------------------------
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>chr6B_1_TraesCS6B01G090600
TATACATATCCACATAAACTAACCGCTATGAGCACCCCTGAGAGACTGAGCTGGCACATCATTTTGAGATTGATGAACTC
GCCTCAGACATCTTCGTAGTCGACAAAAACGTCTTCTCCCACTAAATGCACATCGCCGAAAGGCCTT-AAATAAATTCAG
CAAAATGCAAGCACCAGTGTCAAGTCTAGGATTTAAAGCCTGGTGGGCTAGGAATACCATTGTCCTTC-------CCAAC
CACAGGTCGATTCGCACAGACACGAGATCGTAAGTTATAACCGTACGTACGTGGGTAACACACGGGAAAGTTGTGGTCTG
CCTGGTAATTGGTTGTAAGTTGATCAGTATTGAATTCATGCTCCAGCCAACTCATCCAAAAGTCCGAACTGATGGAGGGA
GGTGGGTAATATATTTCAACACTCCCCCTCACGTCTACGCTATTTTAGTCCTTAGACGTGGGATCGATGTAGGCCGCAGA
ATCGTTTTATTTAATACTGCGTTGGCAGGGTCTTGAACTCAAGACCTCTTGGCTCGGATACCATATTGAATTCATGCTCC
AGCCAACTCATCCAAAAGTCTGAACTGATGGAGGGAGGTGGGCAATATATTTCAACAATCAGTCACTGGCCGCATGCATA
CCAGCATATGCTGGCAGGCGATCTGTTGGTTGGTTAATTTGCGCTTGC--------AGTGACTAGGTCAAGAATTGTCAT
TTGATCAAATCAATGTATGCATGCAGCCAATCAACATCAAGACAGTGGCAAAACCGTCCTGAGCCGGCCATGCATGAGTT
CCACCAATGGAGGGGCGGTGTACGCTATGCCCACTCGTCGTCACCCTAGGTATTACCTTGATTTAATCGTATATATTC-C
CGGCAGCAAATCCTACAAATACCATCGACTCATGGAGTAAGTATACACGATACTCCTACAGCCAGCCCCCTATATCCATC
ACAAGTTCACCTGTGATTTCACTAAATTCTCGCAAGGAGCTGAGCGAGGAGGGGTTGATGGCGAAGACGTCGTGGCCTGA
GGTGGTGGGGTGGCCGGAGCTGAACGCGGCGGACCAGATCAACATCGACCGGCCGGACGTGTCGGTGGGGTTCTACATGG
AGGGCTCCCCGCTGCCGTCCGGGTACGACCCCCGGCGCGTAGTCATCATCGTCAACGCGTCCGGCGTGGTCATCAGGACC
CCAGTCGTCGGCTAGCTGCTGGCCTTCAGTCCGGCTGGGTACGTACATGCGGGGGTGTGCATGCTAACACTCCCTGCAAC
CTGAGTACACTGGAGCCTGTTGTGTTCCATATACGAACGTGCTTATGTATCCCAACTGTTAGGGGTTCTGTATGTGGCCT
GTAATCCCTTGATCATGAGGTGT-----ACAGGAATAAATTTCAAGAAAACTCCATTTTGATCTTCTTTTTTATATGAGC
AAAGC--TAAATACAAGGAGGCAGCCCTCAATGCAATAATTATTATACCATTCACATTGTTAGACTTTTTTTTAAACACA
GTACAGACGCAAACGTTCATATACACGCGCATACACTCACCCCTATGAACGCACACATGCACACCCTACCCCTATGAGCA
CCTCCGAAAGACTGAGCCGACATATCATCTTGGAATTTACGAAGTCACCATACGCACCTCGTCGTTGACGGGAATGTCTC
CTCCCACTGAATGCGCATCGCTCGAAATCCTGAAATAAATCCAGGAATAAATGCGAGCACCAGGATTTGAACCCTGGTGG
GCTGGGGATACCACAGTTTCTCTAACCATCCAACCACAGGTTGGTTCGCCACATTGTTAGACTTTTGTGATGTTAAAATT
GGATATCACCAAAGCCTTTGACACGATGGGGTGGGCCTTGTTACTCGAGATCCTCACCAAGGTGGGGTTCAGACAGAGGT
GGTTAGCTTGGCTGGCGGGGCTCCTGGCCTCGACCTCCACGAGGGGGCTTCTAACCGGTGTCCTCGGCCTCCACGAGGGT
GCTTCTAACCAGTGGCCTCGGCCTCCACGAGGGTGCCGCTAACAGGTGACCTCAGCCTCCACGAGGGTGCTTCTAACCAG
TGTCCTCGGCCTCCGCGAGGGTGCTGCTAACCGGTGTCCTCAGCCTCCACGAGGGTGCTTCTAACCGGTGTGCCTGGCAA
GTTGATTTTCAGCCGGCGGGGGCCTT---------------CCCCCTGCTTTTTGTCATTTCCATGGACGGGCTTCA
>chrUn_2
-ATACATACCCACATGCACTCAACCCTACAAGCACCTCCGAGAGACTGAGCTGGCACATCATTTTGATATTGACGATTTC
GCCTCAGACGTCTTCATAGTAAATGGGGACGTCTCCTCCCACTGAATGCACATCGCTGGAAGGCTTGAAAATAAATTTAG
GAAAATGAGAGTACCAGTGT-AAGTCTAGGACTTGAAGTCTGGTGGGCTAGGGACCCCACTGTCTTTCTAACTATCCAAC
CACATGTTGGATCGCAATGACATGTTTTGAATTTTTACCGTCT-------------------------------------
CCTGATAATTACTCGGGAGACGATCCGACACTCAGTTACAGAGTCGGTAGTAAGCTG-----------------------
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---------------------------------------------------------ATCAGTCACTGGCCGCATGCGTA
CCAGCATACGCTGGCTGGCTATCC----GTTGGTTAATTTGCGCTTCTG--------GTGACTAGGTCAAGAATTGTCAT
TTGATCAAAGCAATGTATGCATGCAGCCAATCAACATCAAGACAGTGGCAAAACCGTCCTGAGCCGGCCACGCATGAGTT
CCACCAATGGAGGGGCGGTGTACGCTATGCCCGCTCGTCGTCACCCT------TACCTTGAATTCATCGCATATATTTTC
CGGCAATAGATCCTATAAATACCATCGACTCATCGAGTAAATACACACAATATTCCTGCAGCCAGCCGCCAATATCGATC
CCAAGTTCACCAGTGATTTCACTACATTCTCGGAAGGAGCTGAGCGAGGAGGGGTTGATGGCGAAGACGTCGTGGCCTGA
GGTGGTGGGGTGGCCGGAGCTGAACGCGGCGGACCAGATCAACATCGACCGGCCGGACGTGTCGGTGGGGTTCTACATGG
AGGGCTCCCCGCTGCCGTCCGGGTACGACCCCCGGCGCGTAGTCATCATCGTCAACGCGTCCGGCGTGGTCATCAGGACC
CCCGTCGTCGGCTAGCTGCTGGCCTTCAGTCCGGCTGGGTACGCACATGCTGGGGTGTGCATGCTAACACTCCCTGCAAC
CTCAGTACAGTAGAG-CTGTTGTGTTCCATGTACGAACGTGCATATGTATCCCAACTGTTGGGGGTTCTGTATGTGGCCT
GTAATCCCTGGATCATGAGGTGCACAGCACAGGAATAAATTTCAAGGAAACTCCATTTTAATCTTCTTTTCTATATGAGC
AAATC--AAAAAACAAGGAGGCAGCCCTCAATGCAAGAATCATTATACCATTCACATTGTTAGACTTT------------
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-----------------------------------------------------------------TGTGATGTTAAAACT
GGATATCACCAAAGCCTTTGACACGGTGGGCTGGGCCTTGTTACTCGAGATCCTCACCAAGGTGGGGTTCAGACAGAGGT
GGTTAGCTTGGGTGGCGGGGCTCC--------------------------------------------------------
------------TGGCCTCGGCCTCCACGAGGGTGC--------------------------------------------
----------------------------------------------------------TTCTAACCGGTGTGCCTGGCAA
GGTGATTTTCAGCCGGCGAGATTTGCGGCAGGGGGCCCTTCCCCCCTGCTTTTTGTCATTTCCATGGACGGGC----
>chr6A_610
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---------------------------------------------------------ATCAGTCACTGGCCGCATGCATA
CCAGCATACACTGGCAGGCTATCT----GTTGGTTAATTTGCGCTTCTAGACTTCTAGTGACTAGGTCAAGAATTATCAT
TTGATCAAATCAATGTATGCATGTAGCCAATCAA-----------TGGCAAAACCGTCCTGAGCCGGCCATGCATGAGTT
CCACCAATGGAGGGGCGGTGTACGCTATGCCCGCTCGTCGTCACCCTAGGTATTACCTTGATTTGATCGTATATATTC-T
CGGCAGCAAATCCTATAAGTGCCATCGGCTGATCGAGTAAATGTACACAATATTCCTTCAGCCAGCCGCCAATATCGAGC
ACAAGTTCACCAGTGATTTCACTACATTCTCGCAAGGAGCTGAGCGAGGAGGTGTTGATGGCGAAGACATCGTGGCCTGA
GGTGGTGGGGTGGCCGGAGCTGAACGCGGCGGACCAGATCAACATCGACCGGCCGGACGTGTCGGTGGGGTTCTACATGG
AGGGCTCCCCGCTGCCGTCCGGGTACGACCCCCGGCGCGTAGTCATCATCGTCAACGCGTCCGGCGTGGTCATCAGGACC
CCCGTCGTCGGCTAGCTGCTGGCCTTCAGTCCGGCTGGGTACGTACATGCGGGGGTGTGCATACTAACACTCCCTGCAAC
CTGAGTACACTAGAG-CTGTTGTGTTCCATATACGACCGTGCATATGTATCCCAACTGTTGGGGGTTCTGTATGAGGCCT
GTAATCCCTTGATCATGAGGTGCACAT-----GAATAAATTTCAAGGAAACTCCATTTTGATCTTCTTTTTTATATGAGC
AAATCTATAAATACAAGGAGGCAGCCCTCAATGCAAGAATTATTATACCATTCACATTGTTAGACTTT------------
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-----------------------------------------------------------------TGTGATGTTAAAATT
GGATATCACCAAAGCCTTTGACACGGTGGGCTAGGCCTTGTTACTCGAGATCCTCACCAAGGTGGG-TTCACATAGAGGT
GGTTAGCTTGGGTGGCGGGGCTCC--------------------------------------------------------
------------TCGCCTCGGCCTCCACAAGGGTGC--------------------------------------------
----------------------------------------------------------TTCTAACCGTTGTCCTCGGCCT
CCATGAGGGTGGTTCTAA-----------------------------------------------------------
>SNPs
S-------S------SS---S-S-S---SS------S-S----------------------------S-----S--SS--
---------S-----S----SS-SSSSS------S--------S------------S-S-----S-S----------S--
S------SS--S--------S----------S--S---S-------------S-SS---S----S---------------
----S--S-SS-----SS----S-SSS-SSSSSS---SSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
----S-----SS-S-SS--SS----S-SSSSSS-S-S-SSSSSSS-SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------
--------S----------S----SSSS------------------SS--------------------------------
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--------------------------------S-------------------------------S---------------
---------------S-----------------S------S-------S---S----S---------S--S-----S---
-----------S------------S-------------------------------------------------------
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--S-----------------------------------------------------------------------------
-----------S---S--------------------------S-----------------S-------------------
----------------------S-----------------------S---------------------------------
---S--------------------------------S-------------------------------SSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------
-------------------------S----S-------------------------------------------------
-----------S------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSS------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------------
-S----------------S-SSSSSS-----------------------------------------------SSSS
>forward_408
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--------------------------------------------------------------------CTGATGGAGGGA
GGTGGGTA------------------------------------------------------------------------
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>reverse_1731
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--------------------------------------------------ATGCGAGCACCAGGATTTGA----------
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