>input_sequence_87059
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-------------------ATGATCATCGGGGCGAAGGAGGAGCGGGTGGTGGGCACGGGCAAGGCTCCCGGCGTTTGCC
CGTCTTGCGGCGGCCCCGTGGTGGCCACCGACGTGGAGAGCGAGCGGCGCATCCTGTGCCTCCCGCTGTGCCTCAAGAGC
AAGCGCAAGTACTCCTGCACCAGGTGCTTCCGCCGCCTCGTCACCGTCTACACCT------AG-----------------
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>chr2B_1_TraesCS2B01G453600
GAAGAGTCAGCCAGTCGATTCTTTTTAGCAAAAATCAAAATGGTCAATGTAAATATGTATCTCGCAAAGAAGAAAAATAT
AGATAACATATAATAAT----TTTGAACTATGTAAATTTGGCACGTGCACATTTTTCATTTTCTAGTATTGTTTGTAGGC
AACATATACAGATGACTTGCTAGGGCATGGCATATCGAGACAGGCAGGAGAACAAC---TATATCCAAACTAAGATGTCC
CCAACCGTAGGTCTTATCGCGTTCATTGTCTAGCCCAAAAGACCAAAAACTTTATTTTATCATG----------------
-GATGCGTATGAAAGCAAGATGGGAACACGCATGCATAAACTTTAATGTTTATTAGTCAACAAATAAACACATATAGTAA
TGTACTGTACCAAGCTGTTTGTGTAGTACTAGTATGAT------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------TTTTTAAAG-ATGTAATGTCCACTAGCGCCGCTAAAAGAAAAA
AAAAAGG--------------AAAGCCCTGCTACTGTAGCGTGTACTCCTCCACTGGG----------------------
------------------------------GAGACGCACATGGATCGGGCTTGCATGCTCCCTTCCCATGCTCCCACCTG
TGCTCTTACTTTATCCTACGGCTGTCTTTTTTTTCTA----TTTCTAATCTAATCATCTCACCCCTAATTTTAAGGAGGT
GGGACCGAACTTTATTTTCTTCCAATCAAATCAAGCCACGTACGCGGGAGTACGGATGAACACATGCAGGGGGAGCAGGC
AAGTCTCGTCCCACGCACATGGGCCTCCCGTGGGTCGTATATCCATCGAGA--------CGTACGCGAGTCGGTAAAAGC
AAAACCCAAACGGGTCGC--------------------------------------------------------------
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-------------------TGCCGCGCGCGGTCCTGC----------CCCCTGCTTCCC---------------------
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-----------------------------------------------GCCTGGGCCCTCGTCCCCTCCGCTATAT-----
------AT--------GCCTTCCCCGTCACC-------------------------------------------------
-----------------GGCCACA-AAAATCCCCAGACTTTTCGAAAGC-----CAAGA---TCCCACCTCCCTCCAAT-
---CTCTA--TCTTCTTGCTCTCG----------CGCGGCCGAGGGTATCGTCCATC--------GATGGCAGCAATGGA
CGTGGGCGGAGCGGTGAAGATGATCATCGGGGCGAAGGAGGAGCGGGTGGTGGGCACGGGCAAGGCTCCCGGCGTTTGCC
CGTCTTGCGGCGGCCCCGTGGTGGCCACCGACGTGGAGAGCGAGCGGCGCATCCTGTGCCTCCCGCTGTGCCTCAAGAGC
AAGCGCAAGTACTCCTGCACCAGGTGCTTCCGCCGCCTCGTCACCGTCTACACCT------AGCCGA-ATCCAA------
----------GCCTCTACTCCT------ACCG--------ATCCATCCAACCATCGATCAACTAGCGTGCGGCGTCGAAC
AATCC-----------C-CGAGTTCTTTGG--------------------------------------------------
-----------------------------------------TTCTT---AGTTGGCCGTGGTTACGGTCCTAAAGTAGCT
TGCTAGCTAGCCTGGCTAATGTAATTCATTCATCTAAT-----------------------------------TTCCAG-
--------TAGCCATACCTAGCTAATCTGGTGGGCGT---------GAAGGGCTGCAAAACTGGCACTCTGCTGTT----
--TCTTGCAGCAACCTCTCTGTCAATGGTGGCGGGGCACCTCCGCGTTAATGCGCA-----GGCCAGTA-------A-TG
GAAATTTGGAACGCGCCAGCTCCTCCTTCTTGATTAAG--TTTTTTGAGTAACCCTTCTTGATTAAGTTTTTTGAGTAAT
CCTTCTTAATTAAGT--TTTTTGAGATAATCCTTCTTCATTAAGTAAGATGGTGTAATTGATTAATGCACGGCTGGGACA
GAACATCATGGTGATCGA----TAAAATGCAGTTCCAGCCCACTCCCCAGTGACTAGCGTACCCGTCTGTCACT------
-AAAAAAGTACATTGACTCGTCTCGATCAATCTC-----GCTGTTCAACCTGAGCTGTTTTCTTTCCTTTTTTTGCGAAG
GTTACAGTAATCTGTACT---GATAAGCACTTAAGCAGTA------TAGCAGCCACAGAATCTCCGTCGCTGCATGTACT
ACAGTGGTAGCTGCCACAGATCGATGGTGAC-------------------GGCTGCCACC--------------------
-----------------GCAGAAGCAGCCGGCCGGCGCGCGGCCCGTCCGTCCGTTGGTTAACTGTTCCTTTCGCGGGCA
AT--------ACGTCGTACGAGTAAAATCCCCGCGATTCGAACTGCACGGCTGCACACTA--------GCCGGCCGTCCA
ATCTGAACGCGCAAACGAGCCAGACCCT---GTTCAGTATTCACTTTTTAACCGAAGTCTGTCATGACAGTTCATTAGTA
CTCCCTCCGTTTCAAAATAAATGACTCAACTTTTTACTAAAAAAAAAAGATTGTTATACTAAGATGTGTTCAGGGTTAAC
TGTAGGATTATACTCC
>chr2B_1
GAAGAGTTAGCCGATCGATTCTTTTTAGCAAAAATCAAAATGGTCAATGTAAACATGTATCTCGCAAAGAAGAAAAACAT
AGATAACATGACATAAT----TTTGAACTATGTAAATTTGGCACGTGCACATTTTCCATTTTCAAGTATTGTTTCTAGGC
AACATATACAAATGACTTGCTAGGGAATGGCATATCGAGACAGGCAGGAGAACAAC---TATATCCAAACTAAGATGTCT
TCAACCGTAGGCCTTATCGCGTTCATCGTCTAGCCCAAAAGACCAAAAACTTCATCTTATCATGGATGCGTACGAAAGCA
AGATGGGCACACG-----------------CATGCATAAACTTTAATGTTTAGTAGACAACAAATAAACACATATAGTAA
TGTACTGTACCAAACGGTTTGTGTAGTACTCCCTCCGTTCCTAAATATTTGTCTTTCTAGAGATTTCAACAAGTGACTAC
ATACGAAGCAAAATGAGTGAATCTACACTTTAAAATATGTCTACATGCATCCGTATGTTGTGTTCATTTGAAATGCCTGG
AAAGACAAATATTCGAGAACGGAGGGAGTAGTGTGGATTTTTAAAGAATGTAATGTACACTAGCGCCGCTAAATGAAAAA
TAATAGTAATAAGCAAAGAGCAAAGCCCTGCTACTGTAGCGTGTACTCCTCCACTGGG----------------------
------------------------------GAGC----------------------------------------------
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-------------CGCACATGGGCCTACCGTGGGTCGCATATCCATCTAGAGTTCTAGACGTACGCGAGCCGGTAAAAGC
AAAACCCAAACGGGTCGC--------------------------------------------------------------
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-------------------TGCCGCGCGCG----------A-TCCTGCCCCTTCTTCCC---------------------
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-----------------------------------------------GCCTGCGCCCTCGTCCCCTCCGC----------
---------------------------CACC-------------------------------------------------
-----------------GGCCACA-AAAATCCCCAGACTTTTCAAAAGC-----CAAGATCGTCCCACCTCCCTCCAAT-
---CCCCA--TCTCCTTCCTCTGG----------CGCGACCGAGGGTATCGTCCATC--------GATGGCAGCAATGGG
CGTGGGCGGAGCGGTGAAGATGATCATCGGGGCGAAGGAGGAGCGGGTGGTGGCCACGGGCAAGGCGCCCGGCGCGTGCC
CGTCCTGCGGCGGCCCCGTGGTGGCCACCGACGTGGAGAGCGAGCGGCGCATCCTCTGCCTCCCGCTGTGCCTCAAGAGC
AAGCGCAAGTACTCCTGCACCCGGTGCTTCCGCCGCCTCGTCACCGTCTACAGCT------AGTCGCTCCTCAA------
----------GCCTATCCTCCT------GCCG--------ATCCATCCATCCATCGATCAACTAGCGTGCGGAGTTC---
-------------------------TTTGGTTCTTACTCCCTCCGTTCCAAAATAGATGACCCAACTTTGTACTAAAGTT
AGTACAAAGTTGAGTCATCTATTTTGGAACGGAGGGAGTACTTCTT---AGTTGGCCGTGGTTACGGCCCTAGAGTAGCT
T----GCTAGCCTGGCTAATGTAATGTAATGGTGATTCTGAGTTAATTCTTCT---------------------------
-------------ATATCTAGCTTATTTGGTGGGCGTGCATCACGTGAAGGGCTGCAAAACTGGCACTCTGCTGTG----
--TCTTGCAGCAACCTCCCTGTCAATGGTGGCGGGGCACCTCCGCGTTAATGCGCA-----GCCGCGCAGGCCAGTAATG
GAAATCTGGAACGCGCCAGCTCCTCCTTCCTGATTAAG--TTTTTT--------------------------TGAGTAAT
CCTTCTTGATTAAGT--TTTTTGAGATAATCCTTCTAGATCACGTAAGATGGTGTAT----TTAACGCACAGCTGGGACC
GACCATCATGGTGAGCGA----TAAAATGCAGTCCAGGCCCACTGCCCAGTGACTAGCGTACCCGTCTGTTCCT---AAA
AAAAAAAGTACATTGACTCGTCCCGATCGATCCCGCAAGGCTGTCCAACCTGAGCT-TTTTCTTTCCTTTTTTTGCGAAG
GTTACAGTAACCTGTACT---GA--------TAAGCAGTA------TAGCAGCCACAGAATCTCCGTCGCTGCATGTACT
AGAGTGGTAGCTGCCACAAATCGATGGTGACGCACACAG------GCTTTGGCTGCCACT--------------------
-----------------GCAGAAGCAGCCGGCCGGCGCGCGGCCCGTCCGTCCGTTGGTTAATTGTTCCTTTCGCGGGCA
ATCACGTAC---GTCGTACGAGTAAAATCCCCGCGATTC-----------------------------------------
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----------------
>chr2A_1
GAAGAGTCAGCCGGTTGATTCTTTTTGGCAAAAATCAAAATGGTCAATGTAAATATGTATCTCGCAAAGAAGAAAAACAC
AGATAACATGTACTCCAAAAATTTGAACTATATAAATCTGGCACGTGCACATTTTCCATTTTC-----TTGTTTGTTGGC
AACATATACAAATGACTTGCTGGGGCATGGTGTATAGAGACAGGCGAGAGAACAACGCTTATATCTAAACTAAGGTGTCT
TCAACCATAGGCCTTATTGTGTTTATCGTCTAGCCCAAAAGACCCAAAACTTTATCTTATCATG----------------
-GATGGGCACATG-----------------GATGCATAAACTTTAATGTTTATTAGTCAACAAATAAACACATATACACT
AGTAATGTACCAAACCGTTTGTGTAGTAGTACCATGAT------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------TTTTTGAAGGATTA----TACACTAGCGCCGCTAAAGAGGAAA
ATCAA--------------------------------AGCGTGTACTCATCCACTAAGGATTTTTTTTGGATTTTTTTTG
AGGGATTGGATTTTTTGGATGAGGACTGAAGAGT----------------------------------------------
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-------------CGCACATGGGCCTCCCGTGGGTCGTATGTCCA--------------CGTAGGCGAGCCGGTAAAAGT
AAAATCCAAACGGATCGC--------------------------------------------------------------
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-------------------TGCCGCGCGCGCAGGCGCAACGGTCCTGCCACTGCTTGCC---------------------
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-----------------------------------------------GCCTGCGCCCTCGTCCCGTCCGCTATAT-----
------ATACGGGCCTGCCATCCCCGTCACC-------------------------------------------------
-----------------GGCCACA-ACAATCCCCAGACTTTTCAAATCCAAACCA--------CCAACTC----------
--CCCCCTCTTCTTCCTCCTCTCG----------TGCGATCGAGGGGATCGTCGATC--------GATGGCGACAATGGG
TGTGGGCGGAGCGGTGAAGATGATCGTCGGGGCGAAGGTGGAGCGGGTGGTGGGCACGGGCAAGGCGCCCGGCGCTTGCC
CGTCCTGCGGCGGTCCCGTGGTGGCGACGGACGTGGAGAGCGAGCGGCGCATCCTGTGCCTCCCGCTGTGCCTCAAGAAC
AAGCGCAAGTACTCCTGCACCAGGTGCTTCCGCCGCCTCGTCACCGTCTACAGCT------AGCCGA-ATCCAA------
----------GCCTATACTCCT------ACCG--------GTCCATCCATCCATCGATCAACTAGCGTGCGGAGGCGAAC
AATCC-----------C-CGAGTTCTTTGG--------------------------------------------------
-----------------------------------------TTCTTGTT----------------GGCCCTAGAGTAGCT
T----GCTAGCCTGGCTAATGTAATTCATTCATCTAAT-----------------------------------TTCCAGA
CTTTCCAGTAGCCATATCTAGCTAATCTGGTG---------------AGGCGCTGCAAAACTGGCACTCTGCTGTG----
--TCTTGCAGCAACCTCTCTGTCAATGGTGGCGGGGCACCTCCGCGTTAATGCGCA-----GGCCAGTA-------A-TG
GAAAATTTCAAACGC-----------------------------------------------------------------
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>chr6A_512
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-----------------------------------------GGATCCGGCTTGCCTGCTCCCTCCCCATGCTCCCATCCG
TGCTCCCACTTCATCCTACGGTTGTCTTTTTTCCTCTTTTCTTTCTAATCTAATCATCTCCCCCCTGATTTTAAGGGGGT
GGGGCCGGACCTTATTTTCTTCCAATCAAATCAAGCCACGTACGCGGGAGCACGGATGGGCACACGCCGGGGGAGCAGGC
AAGTCTCGTCCGGGGATTTGTACTGT------------------------------------------------------
---ACCCAAACGGGGGTTTTCTGTCAAGATGACGGCTGAATATACCGTATGATCAGCGAGCCCTTCCCATTATATCTATG
TTACTTGCTTTTGCTTTTCTCTATATTGGTTCAGGACATATATATGAAATTTCCCCCTCCGTTATAACCTTCTATGTAAC
CATACAAAGTATGGAGAAGAGAAAATTATGCAGTGAAGGAGTGCATGACCAACTGACAAACTGTTCCTGGATCAAATCAG
TTACTCCATAATAGATTATGATGTTGAGTTCACGGAAAGATACCATGTGAAACAATTTTCTCTAACAAGAACTTCTGGCA
ATATATCAAAATATGTTTTGTCCATCATTTTGTAGTTCTATTGGATATGTGTCCATCCTTTTCGAATTTATGTTCTTATT
CCATCCTACATGGCCTAGCTTTAATTATACCAAAAGTTTGGGTAATTCTGATTATTGGAAACCAGAAAGAGGAGTCGCAT
TGTTCCTTGTACATGATAGATCTACATGTCTTAGCTTAATAAAGAAGAGTTGCATTGTTCCTTGTACATGATCGATCTAC
ATGTCCTAGCTTGATTAAAAAAGAGTCGCATTATTCCTGGTACAAAAAATGATGCTAGTCATTTTGTGGCAAATTTTGGA
AGATCACAATGCCGAACTATTCTGTGCGCGCAGATGCAAGAAATTCAGGAAGTTGGGCAAAGTAGGGTTGTTGGAGGCTA
TCACTATTGCGCATCGCTGTCCAGGCCAAAATCTTGTCAGACTATGCGTGGACATCAGCAACCTTGAAGCATGCTACCTT
CTTGGAAATTGTAAGAATAATTAGCACAATTATTAATCATGTTCCCTTTCTTTCCTTTGTGCTTAGCGAATGTGACTGAT
TGATCTTTCTATTGTTTTTGGTGTGTCAATAGATCCGGTTGTATTTCCTAGGAGCCGGGAGGCTGGAGCAACGCCGGTGA
CAACCGCGACGGTGGGTGAGACCGCTAGGAGTCAATCCACTCCCTGGGCGTCGTTCAATTCATCGGCATTGGTGCCACCA
AGGACGATCACAACAAATGATATTTTTCCTTTGTTTTTTTTTCTGGTGGTAGTGGATTGTTTGCTCCTTGATGCGTGGAT
TTTCAAGTGTAGGCTGTTGATGAGGAAACAAAGTTGGTGGAAATATCAACGTTGGACAAAATAATAGAAACATTAAGCGC
AGAATGTGCTGTACCTGAATTAGTTGCCTGGAAACATAGGGAATGTGCTAAATTACTGAAGGGCGAGAGCCATAGGAAAA
GGGATCGGGTGAAGAAAGAACATGAGAGATGGGTGTCTGGCTCCTGAGATCGATTGACTATCATCAAACTATTACTAACA
TGATGTAATCAATCCAACCGTTTGTATTCTTAAAAAAGAGACCATTTGTCTCTTTTTTAATATATTTTTTGAATTGTCTG
GATTGCTTACCACATGTTTCACATGGTAACCATTAGTCTCAAGTTAAAGCCGACGGACTGAATATTCAGTGGGACTTGGC
ACAATACCAAAGAATCACAAAAATCTTTCCATTCGATGATATTGAAAAGGCGTAGGTACTGTCTGGCTAGAGGCGTCTCC
CCTAGCCAAGCAACATGTTTTACATTATATGGACCGAGTTGAAGTAATACATGAGATTTGCCAAAAAGAGTGAACTAATA
CACGAGACAAACAGAAGATGAGAAGAATTAACCTACTAGCAAAACAACACACCTACCTGCTAATCAACAGGAAACACACA
GTTGCATCACCAAACCATGCCTAGCTACCTGACTGACAGCCAGGTAAGCTAACAATGTACATATACTCCCTCCGTCCGGA
AATACTTGTCATTGAAATGGATGTATCTATATGTATTTTAGTTCTAGATACATCCATTTTGATGACAAGTATTTCCGAAC
GGAGGGAGTACATCACACAGACAAACACAACATGTCCATCAGTACCAAACGTCGTGCAGCTCGATCGACCGATCTCAATC
AATCCTTGATGCCGGAGGAGGAGAAGCAGCCGCAGAGGGAGGTCCCACATGCTCTTCTTCACCCCGTTGTGGTCAGCCAT
CCTTCTTCTTCAGCCCGTTGTGGTCAGCAAACGAAAAAAGCAAATACAACATGTTATATATTTTTTCAAATAGAGAGATA
ACCTTAAATTATTGTGACAGTTAGATGATCCAAACATGAATTAAGGTAATAAAAATAAAGAGGCTCAATATGCCAGCCAC
ACAAAGGACAACAGACAAGACACAAGGAATATGGAGCCAACAGACAAGACACAAGAAATGTATCACATATCTTATTAGTA
GGTAGCCACCCATACCGGTTCAATGAATCCCAACTCCCAAGTGACCATCTCCCACAGGTTGCACTAATAAACCACATAAG
TTGAACCCTTTTTCTGGAAAATAAAGGACCACATATCATTGCGAAAATAAGTTGCAATTTTTTTAAAACTTTCTAACTGT
TAAACACACAATTATTGCGATAAATCAGTATAGTTCATAGTAGAACGAGATCTTTTACTGTACCCCGAAATGAATATGCA
CCATTTGTTTTCCTTAATCCAACGGTTTGCGCGATGTGGTACTCCAGCATCAGTCCCACGGAGTACTAACCCGGAAACAG
GTGGAGTACCTCCGTTTGAGGGGCAAAAGGGTAATCCCCGTGAGTATATCAGTATTTTCTTATTCTTTTTTTCTCCTGGC
TGGAAACAAAAGACCTAACCTAAACACATTGCCCTAACCCATTCATAGCCTTCCCGCTCGTCCCCTACTC----------
---------------------------CTCCATCTCCACTCGTCATCGGTGCGGCGTGCGCCACGCCTCCTCCTCCGGCG
GCAGCGTCTCTGGCAGCGGCCACG-ACAACCATAGTTGGCGAGG-----------------------CAC----------
--ATGCCTCTTCCTCTACATCCGG----------TGCCGCCCCCCCCCCTTGACTACATGGCTAAAGGCATGGCGCGGAT
CGGCGCCCAGG----------------------------GCAGCCGGCGTTGGCGAGGCGCACTACTCCTGGCTCGTGCC
CTACCCCTCCATCTCCG---------------------------------------------------------------
-----------CTCGTCGAGCAGCTGCTGGCTCCCGGGCGTGTCCCGCATGCGGGTAGTAGAGCCGG-CCTAAGAGGGAA
TTTGGGATCCGGCTTGCCTGCT------CCCT--------CCCCATGCTCCCATCCGTGCTCCCACTTCATCCTACG---
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-----------------------------------------------------GTTGTCTTTTTTCCTCTTTTCTTTCTA
ATCTAATCATCTCCCCCCTGATTTTAAGGGGGTGGGGCCGGACCTTATTTTCTTCCAATCAAAT----------------
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----CAAGCCACGTACGCGGGA----------------------------------------------------------
--------------------------------------------GCACGGATGGGCACAC--------GCCGGGGGAGCA
GGCAAGTCTCGTCC------------------------------------------------------------------
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>chr2D_711
CTCCTCC-------------------------------------------------------------------------
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---------------------------------C----------------------------------------------
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-------------CGCACATGGGCCTCCCGTGGGTCGTATATCCATCGAGA--------CGTAAGCCAGTCGGTGAAAGT
AAAACCCAAACG--------------------------------------------------------------------
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--------------------------CGCGCAGGTCGTATA-TCCTGCCCCTGCTTCCC---------------------
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-----------------------------------------------GCCTGTGCCCTCGCCCCCTCCGCTATATATGGG
GCTGCCAT--------GCCA-TCCCGGTACC-------------------------------------------------
-----------------GGCCACA-AAAATCCCCAGACTTTTGAAGGCCAAACCA--------CCAACTC----------
--CCCCCTTTTCTTCCTCCTCTCG----------TGCGACCGAGGGGATCGTCGATCG----ATCGATGGCGACAATGGG
CGTGGGCGGAGCGGTGAAGATGATCATCGGGGCGAAGGAGGAGCGGGTGGTGGGCACGGGCAAGGCGCCCGGCGCGTGCC
CGTCCTGCGGCGGCCCGGTGGTGGCGACCGACGTGGAGAGCGAGCGGCGCATCCTCTGCCTCCCGCTGTGCCTCAAGAGC
AAGCGCAAGTACTCCTGCACCAGGTGCTTCCGCCGACTCGTCACCGTCTACGGCT------AGAAGA-ATCCAA------
----------GCCTCCGCT----------CCT--------ATCAATCGATCCATCCATCAACTAGCGTGCGCAGTAGAAC
AATCC-----------C-CGAGTTCTTTGG--------------------------------------------------
-----------------------------------------TTCTTGTTAGTTGGCCGTGGTTACGGTCCTAGAGTAGCT
T----GCTAGCCTGGCTAATGTAATTCATTCGTCTAAT-----------------------------------TTCCAG-
--------TAGCCATATCTAGCTAATCTGGTGGGCGTGCATCATGTGAAGGGCTGCAAAACTCC----------------
-------CAGCAACCTCTCTGTCAATGATGGCGGGGCACCTCCGCGTTAATGCGCA-----GGCCAGTA-------AATG
GAAATCTTGAACGCGCCAGCTCCTCCTTCCTGATTAAG--TTTTTT--------------------------TGAGTAAT
CCTTCTTGATTAAGTATTTTTTGAGATAATCCTTCTAGATTAAGTAAGATGGTGTAATTAATTAACGCACGGCTGGGACC
GACCATCATGGCGATCGAGTGATAAAATGCAGTCCCGGCCCACTGCCCAGTGACTAGCGTACCCATCTGTTTCTCA-AAA
AAAAAGAGTACATTGACTCGTCTCGATCGATCCCGCAAGGCTGTTCAACCTGAGCTGTTTTCTTTCCTTTTCTGGCGAAG
GTTACAGTAACCTGTACT---GA--------TAAGCAGTA------TAGCAGCCACAGAATCTCCGTCGCTGCGTGTACT
ACAGCGGTAGCTGCCACAAATCGATGGTGACGCCCACAG------GTTTTGGCCGGCACT--------------------
-----------------GCAGAAGCAGCCGGCCGGCGCGCGGCCCGTCCGTCCGTTGGTTAACTGTTCCTTTCGCGGGCA
ATCACGTACTACGTGGTACGAGTAAAATCCCCGCGATTCGATCTGCACGGTTGCACACTAGCCGGCCGGCCGGCCGTCCA
ATCTGAACGCGCAAGCGATCCAGACCCTTCTGTTCAGTGTTCACTTTGTAACCGGAGTCTGTCATGACAATTCAT-----
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>chr2A_720
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-------------CGCACATGGGCCTCCCGTGGGTCGTATATCCATCGAGA--------CGTAGGTGA------------
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--------------------GCCGCGCGCGCAGGCGCAGCGGTCCTGCCCCTGCTTCCC---------------------
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-----------------------------------------------GCCTGCGCCCTCGCCCCCTCCGCTATAT-----
------AT--------GCCT-CCCCCGCACC-------------------------------------------------
-----------------GGCCACA-AAATCCCCCAGGCTTTTCAAACCCAAACCA--------CCAACTC----------
--CCCCCTCTTCTTCCTCCTCTCG----------TTTCGTTTCTTGCGGC------CG----A----GGACAGCAATGGG
CATGGGCGGAGCGGTGAAGATGATCGTCGGAGCGAAGGAGGAGCGGGTGCTGGGCACGTCCAAGGCGCCCGGCGCTTGCC
CGTCCTGCGGCGGCCCCGTGGTGGCCACCGACGTGGAGAGCGAGCGGCGCATCCTCTGTCTCCCGCTGTGCGTCAAGAAC
AAGCGCAAGTACTCCTGCACCAGGTGCTTCCGCCGCCTCGTCACCGTCTACAGCT------AGCTCAACCTCAA------
----------GCCTCTGCT----------CCT--------GCCGATCCATCCATCGATCCACTAGCGTGCGGAGTTGAAC
AAT-C-----------C-CGAGTTCTTTGG--------------------------------------------------
-----------------------------------------TTCTTGTT----------------GGCCCTAGAGTAGCT
T----GCTAGCCTGGCTAATGTAATTCATTCATCTAAT-----------------------------------TTCCAG-
--------TGGCCATATCTAGCTAATCTGGTG---------------AAGCGCTGCAAAACTGGCACTCTGCTGTG----
--TCTTGCAGCAACCTCTCTGTCAATGGTGGCGGGGT-------------------------------------------
--------------------TCCTCCTTCTTGATTAAG--TTTTTT--------------------------TGAGTAAT
CCTTCTTGATTAAGTTTTTTTTGAGATATTCCTTCTTGGTTAAGTAGATAGTG-----TAATTAACGCACGGCTGGGACC
GACCATCATGGTGTGCGA----TAAAATGCAGTCCGGGCCCACT-CCCAGTGACTAGCGTTTCTCAAAAG--------AA
AAAAGAAGTACATTGACTCGCCTCGATCGATCCCGCAAGGCTGTTCAACCTGAGTTGTTTTCTTTCCTTTTTT-GCGAAG
GTTACAGTAACCTGTACTACTGA--------TAAACAGTATAGCAGTAGCAGCTACAGAATCTCCGTCGCTGCGTGTACT
ACAGCGGTAGCTGCCACAGATCGATGGTGCCGCCCACAGCCACAGGTTTTGGCTGGCATGCCACCAGCTCATGCAATGCT
CCCACAAGCCACGGCAAGCAGAAGCAGCCGGCCGGCGCGCGGCCCGTCTA----TTGGTTACCTGTTCCTTTCGCGGGCA
ATCACGTAC---GTGCCGCCTTGGT-----------------------------ACACTAGCCAGACGGCCGGCCGTCCA
ATCTGAACGCGCAAACGAGCCAGACCCT----------------------------------------------------
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----------------
>chr2D_721
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--------------GCACATGGGCCTCCCGTGGGTCGTATATCCATCGAGA--------CGTACGCGAGCCCGTAAAAGT
AAAACGCAAACGGGTAGC--------------------------------------------------------------
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-------------------TGCCGCGCGCGCAGGCGCAGCGGTCCTACCCCTGCCTCCC---------------------
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-----------------------------------------------GCCTGCGCCCTCGTCCCCTCCGCTATAT-----
------AT--------GCCTTCCCCGGCACC-------------------------------------------------
-----------------GGCCACA-AAAATCCCCAGACTTTTCAAAGCCAAACCA--------CCAACTC----------
--ACCCCTCTTCTTCCTCCTCTCG----------TGCGACCGAGGGGATCGTCGATCG----A----TGGCAACAATGGG
CGTGGGCGGAGCGGTGAAGATGATCGTCGGAGCGAAGGAGGAGCGGGTGGTGGCCACGGGCAAGGCGCCCGGCGCGTGCC
CGTCCTGCGGCAGCCCCGTGGTGGCGACCGACGTGGAGAGCGAGCGGCGCATCCTCTGCCTCCCGCTGTGCCTCAAGAAC
AAGCGCAAGTACTCCTGCACCAGGTGCTTCCGCCGCCTCGTCACCGCCTACAGCT------AGCCGA-TTCCAA------
----------GCGTCTACT----------CCT--------ACCCATCAATCCATCGATCAACTAGCGTGCGGAGTCGAAC
AAT-C-----------CCCGAGTTATTTGGTTC-----------------------------------------------
--------------------------------------------TT---TGTTGGCCGTGGTTACGGTCCTAGAGTAGCT
T----GCTAGCCTGGCTAATGTAATTCATTGATCTAAT-----------------------------------TTCCAG-
--------TAGCCATATCTAGCTAATCTGGTGGGCGTGCATCACGTCGATCGCTGCAAAACTGGCACTCTGCTGTG----
--TCTTGCAGCAACCTCCCTGTCAATGGTGGCGGGGCACCTCCGCGTTAATGCGCA-----GGCCAGTA-------A-TG
GAAATTTCGTACGCGCCAGCTCCTCCTTCTTGATTAAG--TTTTTT--------------------------TGAGTAAT
CCTTCTTGATTAAGTA-----------------------------AGATGGTG-----T-ATTAACGCACGGCTGGGACC
GACCATCATGGTGAGCGA----TAAAATGCAGTCCCGGCCCACTGCCCAGTGACTAGCGTACCCCTCTGG-TCTCAGAAA
AAAGAGAGTACATTGACTCGTCTCGATCGATCCCACAAGGCTGTCCAACCTGCGCTATTTTCTTTCCTTTTTT-GCGAAG
GTTACAGTAGCCTGTACT---GA--------TAAACAGCA------TAGCAGCCACAGAATCTCCGTCGCTGCATGTATT
-----------------------------------ACAG------GTTTTGGCTGCCACT--------------------
-----------------GCAGAAGCTGCCGGCCGGCGCGCGGCCCGTCCGTCCGTTGGTTAACTGTCCCTTTCGCGGGCA
ATCACGTAC---GTCGTACGAGTAAAATCCCCGCGATTCGATCTGCACGGCTGCACACTA--------ACCGGC------
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>chr2D_828
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------------------------------------------------CCTGCGCCCTCGTCCCCTCCGCTATAT-----
------AT--------GCCATCCCCGGCACC-------------------------------------------------
-----------------GGCCACTCAAAATCCCCAGACTTTCCAAGCCCAAAATCAAAA---TCCCACCTCTCTCCGAT-
---CCCCCCTTCTTCCTCCTCTCGTTTCGTTTCTTGCGGCCGAGGGGATCGTCGATCGATCCA----TGGCAACAATGGG
CGTGGGCGGAGCGGTGAAGATGATCATCGGGGCGAAGGAGGAGCGGGTGGTGGCCACGGGCAAGGCGCCCGGCGCTTGCC
CGTCCTGCGGCGGCCCCGTGGTGGCGACCGACGTGGAGAGCGAGCGGCGCATCCTCTGCCTCCCGCTGTGCCTCAAGAGC
AAGCGCAAGTACTACTGCACCAGGTGCTTCCGCCGCCTCGTCACCGTCTACAGCT------AGTAGCTCATCAA------
----------GCCTCTCCT----------CATGCCGATCCATCCATCCATCCATCGATCAACTAGCGTGCGGAGTTC---
-------------------------TTTGGTTC-----------------------------------------------
--------------------------------------------TT---AGTTGGCCGTGGTTACGGCCCTAGAGTAGCT
T----GCTAGCCTGGCTAATGTAATGTAATGGTGATTCTGAGTTAATTCTTCT---------------------------
-------------ATATCTAGCTTATTTGGTGGGCGTGCATCCCGTGAAGGGCTGCAAAACTGGCACTCTGCTGTG----
--TCTTGCAGCAACCTC-----------TGGCGGTGCACCTCCGCGTTAATGCGCA-----GGCCAGTA-------A-TG
GAAACCTGGAACGCGCCAGCTCCTCCTTCCTGATTAAGTTTTTTTT--------------------------TGAGTAAT
CCTTCTTGATTAAGTTTTTTT-GAGATATTCCTTCTTGGTTAAGTAGATGGTG-----TAATTAACGCACGGCTGGGACC
GACCATCATGGTGAGTGA----TAAAATGCAGTCCGGGCCCACTGCCCAGAGACTAGCGTACCCGTCTGTTTCTCAAAAA
AAATAGAGTACATTGACTCGTCCCGATCGATCCCCCAAGG-------ACCTGCGCTGTTTTCTTTCCTTTTTT-GCGAAG
GTTACAGTAGCCTGTACT---GA--------TAAACAGCA------TAGCAGCCATAGAATCTCCGTCGCTGCATGTACT
ACAGTGGCAGCTGCCACAGATCGATGGTGACGCCCACAG------GTTTTGGTTGCCACT--------------------
-----------------GCAGAAGCAGCCGGCCGGCGCGCGGCCCGTCCGTCCGTTCGTTAACTGTTCCTTTCGCGGGCA
ATCACGTAC-------------TAAAATCCCCGCGATTCGATATGCACGGCTGCACACTA--------GCCGGCCGTCCA
ATCGGAACGCGCAAACGAGCCAGACCCT----------------------------------------------------
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>chr2B_855
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------AT--------GCCA-TCCCGGCACC-------------------------------------------------
-----------------GGCCACTCAAAATCCCCAGACTTTCCAAAGCCAAAATC--------CCAACCTCCGTCCTCCG
ATCCCCCTCTTCTTCCTCCT-TCT----------CGCGGCCGAGGGGGTCGTCCATC--------GATGGCGACAATGGG
GGCGGGCGAAGCAGTGAAGATGATCTGCGGGACGAAGGTGGAGCGGGTGGTGGGCACGGGCAAGGCGCCCGGTGCTTGCC
CGTCCTGCGGCGGCCCCGTGGTGGCCACCGACGTGGAGAGCGAGCGGCGCATCCTCTGCCTCCCGCTGTGCCTCAAGAAC
AAGCGCAAGTACTCCTGCACCAGGTGCTTCCGCCGCCTCGTCACCGTCTACAGCT------AGCCGG-CCCCAA------
----------GCCGCTGGTGGTGGTGCCACCG--------ATCCATCCATCCTTCCATCAACTAGCGATGTACTACCAAG
CAAATCCATTAATCCGCTCGACTTCTTTGATTCC----------------------------------------------
-------------------------------------------------TGTTGGCCGTGCTTACGGCTCTAGAGTAGCT
T----GCTAGCCTGGATAATGTAATGTCATGTTGATCCTGTCTTAGTTCTTCTACAGTGTTTCTAGGGAGTACTCCTAG-
--------TAGCTAAATCTAGCTAATTTGGTGGCCGCGCATCACGTGAAGCGATGCAAAACTGGCACTCTGATGTACCAG
TATCTTGCAGTAAGCTCTCTGTCAATGGTGGCGGGGCACCTCCGCTTTAATGCACCGGCCTGGCCAGTA-------T-TG
GAAATTCGTAATGCGC----------------------------------------------------------------
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>SNPs
------------S----------------------------------------------------------------S--
---------S---------------------------------------------S-------S----------------
----------S--------------------------------------------------------------------S
S----------S--------------S----------------------------S------------------------
-----S-S-SSSSSSSSSSSSSSSSSSSSS--------------------------------------------------
-------------S-S---------------SS-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------S----------------S------
------S-------------------------------------------------------------------------
---------------------------------SSSSSSSS-----S-------S--------S------------S-S-
-----SS----S---------S----------SSSSS-----------------------S-----S---------S---
---S---S--S---------------------------------------S-------SS----S--S------------
-----------SS-------------------------------------------------------------------
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------------------------------SSSS----------------------------------------------
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----------------------------------------------------S---------------------------
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----S-S----------S-------------------------------------------------------------S
--------------------------------------------------------------------------S-----
----S---------------------------------------------------------------------------
----------------------------------------------------S---------------------------
-------------------------------------------------S------------------------------
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------------------------------------------------------------------------S-------
-SSSS---------------------------------------------------------------------------
----------------S----------------------------------------------------------S----
--------------------------------------------------------------------------------
----------------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSS--------
-------S-----------------------------S---------------------S-----S-------------S
--S------------------------------S--S-------S-------------------------SS--------
----------------------------S---S-----------------------------------------------
----------S-------------S-SSSSS-------------------------------------------------
-----------------------------------------------------------S--------------------
--------------------------------------------------------------------------------
-----------------------------------------S--------------------------------------
--------------------------------------S--------S------S--------------S-----SSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSS
>forward_891
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-----------------------------------------------------------------------TAAGGAGGT
GGGACCGAACT---------------------------------------------------------------------
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>reverse_5073
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--------------------------------TCGCTGTTCAACCTGAGCTG----------------------------
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