>input_sequence_87046
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-------------------------------------------------------------------ATGAGCAAGTCGT
CGTGGCCGGAGCTGGTGGGCGTCCTGGCGACGCTGGCGGCGACGCAGATCGCGCACGACAGGCCCGACGTCGCCGTCGAG
GTGCTCCCGCCGGGCGCGCCGCTGATGCCCGACTACAACGCCCAGCGCGTCCGCGTCTTCATCAACCTCGGCGGCGTCGT
CTCCAAGACCCCCGTCATCGGCTAG-------------------------------------------------------
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>chr1D_1_TraesCS1D01G024900
GTAAATAATGCATATATTAAGAGCACATGTAAAACATTTTTCTGATACATGCTGGATCTTTTAATAATACATGATGATAT
TTTTTAAAAGTATATATTTTAACACGTTATAAAATACTTGGTAACATTTATTCAAATACATTTTTAATGGAAATACCATT
TTTTTAAACCACACAACATTTTTTAAAATTGTATAGCTTTTCTGAAAATTTCACAAACTTTTTTTAGAAACACGCGAATA
TTTTCTTAAAATGTCATGATCCATCTAAACATTTTTTAACCCACGTGATATGTGAGTATATTGATTGTAATATCATCTTA
TATTATGGGATGAAGGGAGTACCATTTTTTACAATGTCATGGATATTTTTTGGAAACACGAGAATATTTCCAGCAAAGGT
GACGTACATTCTTTTAGTGGCACGAACCATTTCTTTTACATTATGCAAACATTGTTTAACATTCTTTTCATATTTTCCAA
AAAAATCGCATGCATTTTTTGAAAGGCGGGAACCTTTTTCCATTGTGATGAACATTTGCTTTGAAAGTTATCAACATTTT
CAAACTGCGCTAATTTTTTAACCCTAGATTAGCATTTTTTCAATTTCATGTTTTTAAAGTTGGTAAGAGGTTTCGATCCT
GGGACATGTGGGTTATGGGCCCACCACACTTCCGCTGCGCCACTCTGATTTGCTTGTTGAATTTGCAACGTCAAAGTTAG
ATAACGGCAACGCCTGAGTTTGCAAGTAAGTAGGCAGGGGTGCTGGACGGTCACTCTTATGATGATGTTGTTGTTGTCCT
ACTTAATTCCGCCCGTCCACGGAC--GACAACAACACCAAAAACGGTACTGATAAAACGAGGCGCAAAATTGGTTAGAAA
TGCATGATGGCCGATGTGGTTCTCCCTATAAATACACCATG----GCGTAACATGCCACTTAGATACGCACCT-------
------TAGCTAGCTATCTACCATCTTCCGTCGGTGCTCACGAGCTAATAGGTA--------CCAAGATGAGCAAGTCGT
CGTGGCCGGAGCTGGTGGGCGTCCTGGCGACGCTGGCGGCGACGCAGATCGCGCACGACAGGCCCGACGTCGCCGTCGAG
GTGCTCCCGCCGGGCGCGCCGCTGATGCCCGACTACAACGCCCAGCGCGTCCGCGTCTTCATCAACCTCGGCGGCGTCGT
CTCCAAGACCCCCGTCATCGGCTAGCCTCC-----CGCGAATGGCACTTAGTAACGTAACACTACGTACAGTACGTACCA
GCGTGTACGTCGTCGTCCCTGTCCCTGCCCTGCAGCAGCGCTGCTGTGACTACTGTACTATATACGATACAATGGAAGAA
TGAAGTGACGTTATGTGTTTGCGCTACGTGATTTCTACAAAAACTAGCTAAAATATTCGTGGGTGTTAT-GGAATAACAA
ATTTTTCGGAGGGTATAACTCGTTTATCTTGCTCATGTTTATTTCCGTGTTAGCCGTACTGGCATTATGCGTAGATGTGC
CTACTGTTTGTATAGTACATGCTTATTTAGATCGTATTCAGTATGTCATTAATTCTGTCAATGCCATGTTTATGATT-TT
TTTTGGATTAAGTTAATCAAAAATTGCCT-ATTTACTCAGCAGCACGTGCATTTGATTTTTCTTGAACATGCTCACTGGG
TTGAGCAAGACGAGTCTCCTTCTCAATCACACTGGAAATGATATCATCAAGGCTTAGCCGTTCAGTTTTGGAGAATATTA
GCTGGCGGTGGAGATCAAACTCCTCATTTAGGCCATCAAGGAAGAGCTTGCCCACAAATGGTTCACACCAGGTATGGTGA
ACAGCCACGTCATTCTTGTCGACGGGTTGAAAAGGATGGTAATAGTGCAACTCCCTATAGAGTCTCTTCATCTCACCTGC
ATACTCAGTCACTGATTTGTAGCCTTGCTTCAAGTTTGTCAACTCCTGCATGATGCGAGTAGCCTGCATCTTATTTGATT
AT------------------------------------------------------------------------------
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-----------------------------------------------------------AGATAATGTAATTAGTT-AGT
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-----------------------------------------------------------------------------CCT
TAGGTTTGCCGCAGCACTCCGTGCCGTAGCTTGGAGATGATGTCGCGGGTC----------------ACGGCGGCAGCTC
GAGTGCCCACGACAGTAAATCACGGCGACACAACATCACAATTAGCCGTCACCAAGGTTGAAATCACACAGGATTAACCT
GCTCCGATGCCATGTTGAAAATCATCTGAGATTTGAGGGATTTGAGCTAGGGATTGGAGGGAGC
>chr7D_59
----------------------------------------------------------TTTTAATAATACATGATGATAT
TTTTTTAAAGTATATATTTTAACACGTTATG-AATACATGGTAACATTTCTTCAAATACATTTTTAATGGAAATACC-TT
TTTTTAAACCACACAACATTTTTTAAAATTGTATAGCTTTTCTGAAATTTTCACAAACTTTTTTTAGAAACATGCGAATA
TTTTCTTAAAATGTCATGATCCATCTAAACATTTTTTAACCCACGTGATATGTGAGTATATTGATTGTAATATCATCTTA
TATTATGGGATGAAGGGAGTACCATTTTTTACAATGTCATGGATATTTTTTGGAAACACGAGAATATTTCCAGCAAAGGT
GACGTACATTCTTTTAGTGGCACGAACCATTTCTTTTACATTATGCAAACATTGTTTAACATTCTTTTCATATTTTCCAA
AAAAATTGCATGCATTTTTTGAAAGGCGGGAACCTTTTTCCATTGTGATGAACATTTGTTTTGAAAGTTATCGACATTTC
CAAACTGCGCT---------------------------------------------------------------------
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----------------------------------------------------------------
>chr7D_59
----------------------------------------------------------TTTTAATAATACATGATGATAT
TTTTTAAAAGTATATATTTTAACACGTTATG-AATACATGGTAACATTTCTTTAAATACATTTTTAATGGAAATACCATT
TTTTTAAACCACACAACATTTTTTAAAATTGTATAGCTTTTCTGAAATTTTCACAAACTTTTTTTAGAAACACACGAATA
TTTTCTTAAAATGTCATGATTTATCTAAACATTTTTTAACCCACGTGATATGTGAGTATATTGATTGTAATATCATCTTA
TATTATGGGATGAAGGGAGTACCATTTTTTACAATGTCATGGATATTTTTTGGAAACACGAGAATATTTCGAGCAAAGGT
GACGTACATTCTTTAAGTGGCACGAACCATTTCTTTTACATTATGCAAACATTGTTTAACATTCTTTTCATATTTTCCAA
AAAAATTGCATGCATTTTTTGAAAGGCGGGAACCTTTTTCCATTGTGATGAACATTTGTTTTGAAAGTTATCGACATTTC
CAAACTGCGCT---------------------------------------------------------------------
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>chr3D_59
----------------------------------------------------------TTTTAATAATACATGATGATAT
TTTTTAAAAGTATATATTTTAACACGTTATG-AATACATGGTAACATTTCTTCAAATACATTTTTAATGGAAATACCATT
TTTTTAAACCACACAACATTTTTTAAAATTGTATAGCTTTTCTGAAATTTTCACAAACTTTTTTTAGAAACACGCGAATA
TTTTCTTAAAATGTCATGATCTATCTAAACATTTTTTAACCCACGTGATATGTGAGTATATTGATTGTAATATCATCTTA
TATTATGGGATGAAGGGAGTACCATTTTTTACAATGTCATGGATATTTTTTGGAAAGACGAGAATATTTCGAGCAAAGGT
GACGTACATTCTTTTAGTGGCACGAACCATTTCTTTTACATTATGCAAACATTGTTTAACATTCTTTTCATATTTTCCAA
AAAAATTGCATGCATTTTTTGAAAGGCGGGAACCTTTTTCCATTGTGATGAACATTTGTTTTGAAAGTTATCGACATTTC
CAAACTGCGCT---------------------------------------------------------------------
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----------------------------------------------------------------
>chr5D_59
----------------------------------------------------------TTTTAATAATACATGATGATAT
TTTTTAAAAGTATATATTTTAACACGTTATG-AATACATGGTAACATTTCTTCAAATACATTTTTAATGGAAATACCATT
TTTTTAAACCACACAACATTTTTTAAAATTGTATAGCTTTTCTGAAATTTTCACAAACTTTTTTTAGAAACACGTGAATA
TTTTCTTAAAATGTCATGATCCATCTAAACATTTTTTAACCCACGTGATATGTGAGTATATTGATTGTAATATCATCTTA
TATTATGGGATGAAGGGAGTACCATTTTTTATAATGTCATGGATATTTTTTGGAAATACGAGAATATTTCCAGCAAAGGT
GACGTACATTCTTTTAGTGGCACGAACCATTTCTTTTACATTATGCAAACATTGTTTAACATTCTTTTCATATTTTCCAA
AAAAATTGCATGCATTTTTTGAAAGGCGGAAACCTTTTTCCATTGTGATGAACATTTGTTTTGAAAGTTATCGACATTTC
CAAACTGCGCT---------------------------------------------------------------------
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----------------------------------------------------------------
>chr5D_59
----------------------------------------------------------TTTTAATAATACATGATGATAT
TTTTTAAAAGTATATATTTTAACACGTTATG-AATACATGGTAACATTTCTTCAAATACA-TTTTAATGGAAATACCATT
TTTTTAAACCACACAACATTTTTTAAAATTGTATAGCTTTTCTGAAATTTTCACAAACTTTTTTTAGAAACACGCGAATA
TTGTCTTAAAATGTCATGATCCATCTAAACATTTGTTAACCCACGTGATATGTGAGTATATTGATTGTAATATCATCTTA
TATTATGGGATGAAGGGAGTACCATTTTTTACAATGTCATGGATATTTTTTGGAAACACGAGAATATTTCCAGCAAAGGT
GACGTACATTCATTTAGTGGCACGAACCATTTCTTTTACATTATGCAAACATTGTTTAACATTCTTTTCATATGTTCCAA
AAAAATTGCATGCATTTTTTGAAAGGAGGGAACCTTTTTCCATTGTGATGAACATTTGTTTTGAAAGTTATCGACATTTC
CAAACTGCGCT---------------------------------------------------------------------
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>chr1A_628
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-------------------------------------------------------------------AGGTTTCGATCCT
GGGGCCTGTGGGTTATGGGCCCACCACGCTTCCGCTGCGCCACTCTGATCTGCTTGTTAAGTTTGCGACGTCACTTTACA
TATGATAGCAGCTCAGTTA------GCAAGCAAGCAAGGGTTGTCGACGATCACTCTTATGATGAT--------------
ACCTAATTCCTCCCGTCCAGGGAG--CACCACCACCGAA---ATGGCACTGACCAAACGAGGTGCAAACATGTTTAGAAA
TGTACGATGGCTTTCCCTAA--TCCCTATAAATACACCATG----GTGCAACACGCCACTTAGATACGGATCT-------
------TAGCTAGCT---TATCATCTTCCATCAGTGCTCACGAGTTACCTAGGTCCCAACTCCCAAGATGAGCAAGTCGT
CGTGGCCGGAGCTGGTGGGCATCCTGGCGACGCTGGCGGCGGCGCAGATCGCGCACGACCGGCCCGACGTCGCCGTCGAG
GTGCTCCCGACCGGTGCGGCGGTGACTCACGACTACGACTTCGAGCGTGTCCGCGTCTTCATCGACCTCGGCGGCGTCGT
CTCCAAGACCCCCGTCATCGGCTAGCCTCCTGCCCCGCGAATGGCACGTAGTAACGGAATACTACGTACTGTACGTACCA
GCGTGTACGTCGTCCCTCTCTCC--------------------CTGTGACTACTGTACTACGGTATGC----TGGAAGAA
TAAAGTGACGTTGTGTGTTTGTGCTACGTGATTTCTACGAAAACTAGCTAAAATATTCGTGGGTTGTTACGGAGTAACAA
ATTATTCGGAGGGTTTAACTCGTTTATCCCGCTCATGTTTATTTCTGTGTTAGCCGTACTGACATTATGTGTAGATGTGT
TTACTGTTTGCGTAGTACGTGCTTATTTAGATGGAATCCAGTATGTCATTAATTTCGCCAATGCCATGTTCATGATCATT
TCCTGGATTAAATTAATCGAAAAATTACACATTTACTCATCATCACGTGCATCTGATTTTTCTTGAACATGTTCATTGGG
TTGAGCAAGACGAGTCTCCTCCTCAATCACAATGGAAATGATATTATCAAGGCTTAGCCATTCAGTTTTGGATAGTGTTA
GCTGGCGGTGGAGATCAAACTCCTGATTTAGGCCATCAGGGAAGAGCTTACCCACAAATGGTTCAAACCAGGTATGGTGA
ACAACCACGTCACTCTTGTCAACGGGTTGAAAAGGATGGTAATAGTGCAACTCCCTATACAATCTCTTCATCTCACCTGC
ATACTTAGTCATTGATTTTGAACCTTGCTTCAAGTTAGTCAACTCTTGCATGATGCGAGTAGCCTACATCTTATTTAATT
AT------------------------------------------------------------------------------
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-----------------------------------------------------------AGATAATGTAATTAGGTGAGT
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-----------------------------------------------------------------------------CCT
TAGGTTTGTCGCAGTACTCCGTGTTGTAGCTTGGAGATGATGCCGCAGGTC----------------ATGGCGGCAGCTC
GAGTGCCCATAGCAGTAAATCATGGCGACACAGCACCACAATTAGCCATCACCAAGGTC-----CACACAGGATTAACCT
ACTCTGATGCCATGTTGAAAATCATCTGAGATTTGAGGAATTTGAGCTAGGGATTGGAGGGAG-
>chr1A_628
--------------------------------------------------------------------------------
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-------------------------------------------------------------------AGGTTTCGATCCT
GGGACCTGTGGGTTATGGGCCCACCACGCTTCCGCTGCGCCACTCTGATTTTCATGTTAAATTTGCGAGGTGGCGCTACA
TA--------------TTT------GCAAGCAGGCAAGGACTCTGGACGCATACATGGACGGT-ATGATATTGCTGTCCT
ACTTAATTCCGCACGCCCACGGACACCACCAACACCAAA---ACGGTACGGACAAAACAAGGCGCAAATTTGTTTAGAAA
TGTACGATGGCTGA--TGGCTCTCCCTATAAATACACCATGCATGGTGTAACGCGCCACATACAGTATATAGCTACGCAT
CTTAGCTAGCTAGCT---TATCATCTTCCATCAGTGCTCACGAGCTAGCA---A--------CCAAGATGAGCAAGTCGT
CGTGGCCGGAACTGGTGGGAGTCCTGGCGACGCTGGCGGCGACGCAGATCGCGCACGACCGGCCCGACGTCGCCGTCGAG
GTGCTCCCGCCCGGCGCGCCGCTGATGCCCGACTACAACGCCGAGCGCGTCCGCGTCTTCATCAACCTCGGCGGCACCGT
CGAGAAGACCCCCGTCATCGGCTAGCCTCC-----CGC------------------------------------------
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----------------------------------------------------------------
>chr1A_628
GTTTCGATTCTGGGACCTGTGGGTTATGGGCCCACCACGCTTCCGCTGCGCCACTCTGATTTGCTTGCTTACACTTGTTT
TTTTAGGGGAATACACCGGATGATTATGATAACCTTTTTATAATATACTCCAGTGATCTAAAAGGTCTTATATTTATTTA
CAGAGGGAGTATATTTTCAATACAAGATGCTCTAAAACAAACTAAGCTGGAAAAACGAGCGACCGACAAAATATGGGCCA
GCGAAATGGAGAAGCCCAACCGCTCTGTTTTCAGTAACAGAACCGGGCCCAACAGGTAAAAAGTCACCCAGAAAAAAAAG
AACTTATCAGAGCCAGGTT-------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------TCGATCCT
GGGACCTGTGGGTTATGGGCCCACCACGCTTCCGCTGCGCCACTCTGATTTTCATGTTAAATTTGCGAGGTGGCGCTACA
TA--------------TTT------GCAAGCAGGCAAGGACTCTGGACGCATACATGGACGGT-ATGATATTGCTGTCCT
ACTTAATTCCGCACGCCCACGGACACCACCAACACCAAA---ACGGTACGGACAAAACAAGGCGCAAATTTGTTTAGAAA
TGTACGATGGCTGA--TGGCTCTCCCTATAAATACACCATGCATGGTGTAACGCGCCACATACAGTATATAGCTACGCAT
CTTAGCTAGCTAGCT---TATCATCTTCCATCAGTGCTCACGAGCTAGCA---A--------CCAAGATGAGCAAGTCGT
CGTGGCCGGAACTGGTGGGAGTCCTGGCGACGCTGGCGGCGACGCAGATCGCGCACGACCGGCCCGACGTCGCCGTCGAG
GTGCTCCCGCCCGGCGCGCCGCTGATGCCCGACTACAACGCCGAGCGCGTCCGCGTCTTCATCAACCTCGGCGGCACCGT
CGAGAAGACCCCCGTCATCGGCTAGCCTCC-----CGC------------------------------------------
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>chr2D_1605
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---------------------------------------GCTGCACGTGCATCTGATTTTTCTTGAACATGCTCATTGGG
TTGAGCAAGACGAGTCTCCTCCTCAATCACACTGGAAATGATATCATCAAGGCTTAGCCATTCAGTTTTGGAGAATATTA
GCTGACGGCGGAGATCAAACTCCTGATTTAGGCCATCAAGGAAGAGCTTGCCCACAAATGGTTCAAACCAGGTATGGTGA
ACAGCCACATCATTCTTGTCAACGGGTTGAAAAGGATGGTAATAATGCAACTCCCTATACAATCTCTTCATCTCACCTGC
ATACTCAGTCACTGATTTTGAGCCTTGCTTCAAGTTAGTCAACTCCTGCATGATGCGAGTAGCCTGCATCTTATTTGATT
TTCCTGAAAATTGCTTCTCCAGAGCTTTCCACACTTCAAATACAGTGGTTATAGTCTCAACTTGTTCTCGTATCGGTGGT
TCCATGCTTGCTAATAACCACACCAAAACTCTATCATTGATCTGTTTGGTGATAGTACCACTTTTCAGTTTCTCTTCATC
GGTACTAAGCAATTCTTCGTAGCCATGAGAACTCAAAATTAACTGGGCATGTCGTGCCCAGCTGATGTAATTGCCCGGTC
CAGCCAACTTTACTGGATTAGGCTCAAGAGCATACTTGACAGCTTCAGGAACCACCTTGAGTTGTTGTTGTTGCTGCTCA
AATACTTTGCTTAAAATTTCATACAACTTATCCACACTAGTATCCCCTGATTTCTCCTTTGTTTGATTTGCCATGATTTA
CCACCACACAAAAAAT--ACCAGACACACAGGAGTTGGCTTTTGCAGATCTCCACTGACAACAACACACAGGCAGCACAA
GCAGAGTAAAAGCAGAGTTGGCACTAGTCAAGTAGATATACTAGTGCGAGTTGCTCTCAAATGCACACAGACTGCACAAG
TATTTTAATCCGGCCACCAAGCAAAGATGAGCTATCCTGCTGCACTACTCACGGTTCTCCAACAGCAGCCACAAGTACTA
GTACCACT-------ATCAATTAACTACAGGAAGCCAGCTTACTGCTTAGACAGGGACGGCACAGCCGCAACAAGCAATT
TTCCGGTGACAGAACCAAATCCACTTCTCAGCAC--GGAGTAATCACAGCTGCACCGGGAGGCAGTCCAACAGGTTACCT
TAGGTTGGTCGCGGTACTCCTTGCCGTAGCTTGGAGATGATATCCCAGGTCACGGTGGCAGCTCGCAGTGGCGGCAGCTC
AAGTGCCCACGACAGTAAATCACGGCGACACAGCACCGCAATTAGCAGTCACCAAGGTCGAAATCACACAGGATTAACCT
GCTCCGATGCCATGTTGAATATCATCTGAGATTTGAGGAATTTGTGTTAGGGATTGGAGGGAGC
>chr5D_1608
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------------------------------------------GCACGTGCATCTGATTTTTCTTGAACATGCTCATTGGG
TTGAGCAAGACGAGTCTCCTCCTCAATCACACTGGAAATGATATCATCAAGGCTTAGCCATTCAGTTTTGGAGAATATTA
GCTGACAGCGGAGATCAAACTCCTGATTTAGGCCATCAAGGAAGAGCTTGCCCACAAATGGTTCAAACCAGGTATGGTGA
ACAGCCACATCATTCTTGTCAACGGGTTGAAAAGGATGGTAATAATGCAACTCCCTATACAATCTCTTCATCTCACCTGC
ATACTCAGTCACTGATTTTGAGCCTTGCTTCAAGTTAGTCAACTCCTGCATGATGCGAGTAGCCTGCATCTTATTTGATT
TTCCTGAAAATTGCTTCTCCAGAGCTTTCCACACTTCA--TACAGTGGTTATAGTCTCAACTTGTTCTCGTATCGGTGGT
TCCATGCTTGCTAATAACCACACCAAAACTCTATCATTGATCTGTTTGGTGATAGTACCACTTTTCAGTTTCTCTTCATC
GGCACTAAGCAATTCTTCGTAGCCATGAGAACTCAAAATTAACTGGGCATGTCGTGCCCAGCTGATGTAATTGCCCGGTC
CAGCCAACTTTACTGGATTAGGCTCAAGAGCATACTTGACAGCTTCAGGAACCACCTTGAGTTGTTGTTGTTGCTGCTCA
AATACTTTGCTTAAAATTTCATACAACTTATCCACACTAGTATTCCCTGATTTCTCCTTTGTTTGATCTGCCATGATTTA
CCACCACACAAAAAAT--ACCAGACACACAGGAGTTGACTTTTGCAGATCTCCACTGACAACAACACACAGCCAGCACAA
GCAGAGTAAAAGCAGAGTTGGCACTAGTCAAGTAGATATACTAGTGCGAGTTGCTCTCAAATGCACACAGACTGCACAAG
TATTTTAATCCGGCCACCAAGCAAAGATGAACTATCCTGCTGCACTACTCACAGTTCTCCAACAGCAGCCACAAGTACTA
GTACCACT-------ATCAATTAACTACAGGAAGCCAGCTTACTGCTTAGACAGGGACGGCACAGCCGCAACAAGCAATT
TTCCGGCGACAGGACCAAATCCACTTCTCAGCAC--GGAGTAATCACAGCTGCACCGGGAGGCAGTCCAACAGGTTACCT
TAGGTTGGTCGCAGTACTCCTTGCCGTAGCTTGGAGATGATATCCCAGGTCACGGCGGCAGCTCGCAATGGCGGCAGCTC
GAGTGCCCACGACAGTAAATCACGGCGACACAGCACCGCAATTAGCAGTCACCAAGGACGAAATCACACAGGATTAACCT
GCTCCGATGCCATGTTGAATATCATCTGAGATTTGAGGAATTTGTGTTAGGGATTGGAGGGAGC
>chr6D_1608
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------------------------------------------GCACGTGCATCTGATTTTTCTTGAACATGCTCATTGGG
TTGAGCAAGACGGGTCTCCTCCTCAATCACACTGGAAATGATATCATCAAGGCTTAGCCATTCAGTTTTGGAGAATATTA
GCTGATGGCGGAGATCAAACTCCTGATTTAGGCCATCAAGGAAGAGCTTGCCCACAAATGGTTCAAACCAGGTATGGTGA
ACAGCCACATCATTCTTGTCAACGGGTTGAAAAGGATGGTAATAATGCAACTCCCTATACAATCTCTTCATCTCACCTGC
ATACTCAGTCACTGATTTTGAGCCTTGCTTCAAGTTAGTCAACTCCTGCATGATGCGAGTAGCCTGCATCTTATTTGATT
TTCCTGAAAATTGCTTCTCCAGAGCTTTCCACACTTCAAATACAGTGGTTATAGTCTCAACTTGTTCTCGTATCGGTGGT
TCCATGCTTGCTAATAACCACACCAAAACTCTATCATTGATCTGTTTGGTGATAGTACCACTTTTCAGTTTCTCTTCATC
GGTACTAAGCAATTCTTCGTAGCCATGAGAACTCAAAATTAACTGGGCATGTCGTGCCCAGCTGATGTAATTGCCCGGTC
CAGCCAACTTTACTGGATTAGGCTCAAGAGCATACTTGACAGCTTCAGGAACCACCTTGAGTTGTTGTTGTTGCTGCTCA
AATACTTTGCTTAAAATTTCATACAACTTATCCACACTAGTATCCCCTGATTTCTCCTTTGTTTGATCTGCCATGATTTA
CCACCACACAAAAAAT--ACCAGACACACAGGAGTTGGCTTTTGCAGATCTCCACTGACAACAACACACAGGCAGCACAA
GCAGAGTAAAAGCAGAGTTGGCACTAGTCAAGTAGATATACTAGTGCGAGTTGCTCTCAAATGCACACAGACTGCACAAG
TATTTTAATCCGGCCACCAAGCAAAGATGAGCTATCCTGCTGCACTACTCACGGTTCTCCAACAGCAGCCACAAGTACTA
GTACCACT-------ATCAATTAACTACAGGAAGCCAGCTTACTGCTTAGACAGGGACGGCACAGCCGCAACAAGCAATT
TTCCGGCGACAGAACCAAATCCACTTCTCAGCAT--GGAGTAATCACAGCTGCACCGGGAGGCAGTCCAACAGGTTACCT
TAGGTTGGTCGCGGTACTCCTTGCCGTAGCTTGGAGATGATATCCCAGGTCACGGTGGCAGCTCGCAGTGGCGGCAGCTC
AAGTGCCCACGACAGTAAATCACGGCGACACAGCACCGCAATTAGCAGTCACCAAGGTCGAAATCACACAGGATTAACCT
GCTCCGATGCCATGTTGAATATCATCTGAGATTTGAGGAATTTGTGTTAGGGATTGGAGGGAGC
>chr6B_1608
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------------------------------------------GCACGTGCATCTGATTTTTCTTGAACATGCTCATTGGG
TTGAGCAAGACGAGTCTCCTCCTCAATCACACTGGAAATGATATCATCAAGGCTTAGCCATTCAGTTTTGGAGAATATTA
GCTGGCGGCGGAGATCAAACTCCTGATTTAGGCCATCAAGAAAGAGCTTGCCCACAAATGGTTCAAACCAGGTATGGTGA
ACAGCCACATCATTCTTGTCAACAGGTTGAAAAGGATGGTAATAATGCAACTCCCTATACAATCTCTTCATCTCACCTGC
ATACTCAGTCACTGATTTTGAGCCTTGCTTCAAGTTAGTCAACTCGTGCATGATGCGAGTAGCCTGCATCTTATTTGATT
TTCCTGAAAATTGCTTCTCCAAAGCTTTCCACACTTCAAATACAGTGGTCAAAGTCTCAACTTGTTCTCGTATCGGTGGT
TCCATGCTTCCTAATAACCACACCAAAACTCTATCATTGATCTGTTTGGTGATAGTACCACTTTTCAGTTTCTCTTCATC
GGCACTAAGCAATTCTTCATAGCCATGAGAACTCAGAATTAACTGGGCATGCCGTGCCCAGCTGATGTAATTGCCCAGTC
CAGCCAACTTCACTGGATTAGGCTCAAGTGCATACTTGACAGCTTTAGGAACCACTTTGAGTTGTTGTTGTTGCTGCTCA
A-TACTTTGCTTAAATTTTCATACAACTTATCCACACTAGTATCCCCTGATTTCCCCTTTGTTGGATCTGCCATGATTTA
CCACCACACAAAGAAAAAACCAGACACACAGGACTTGGTTTTTGCAGATCTCCACTAACAACAACACACAGGCAGTACAA
GCAGAGTACAAGCAGAGTTGATACTAGCCAAGCAGATATACTAGTGCAGATTGCTCTCAAATGCACACAGACTGCACAAG
TATTTTAATCCGGCCACTAGGCAAAGATGAGCTATCCGGCTGCACTAATCACGGTTCTCCAACGGCAGCCACAAGTACTA
GTACCGGCTGCACTAATCAATGAAGTACA-GAAGACAGCTTACTGCTTGGAC--GGACGGCACAATGGCAACCAGCAATT
TTTCCGTGGCAGCACAACATCCACTTCTCAGCACAGGGAGTAAGCACAGATGCACCGGGAGGCAGTC-AACAGGCTACCT
TAGATTGGGCGCAGCACTCGGTGCCGTAGCTTGGAGATGATGTCGCAGGTCTCGGCGGCAGCTCGCGAACGACGCAGCTC
AAGTGCCCACAGCCGTAAATCACGGCGACACAGCACCGCAATTAGCCGTCACCAAGGTCGAAATCACACAGGATTAACCT
GCTCCGATGCCATGTTGAAAATCATCTGAGATTTGAGGGATTTGAGCTAGGGATTGGAGGGAG-
>chr4A_1608
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------------------------------------------GCACGTGCATCTGATTTTTCTTGAACATGCTCATTGGG
TTGAGCAAGACGGGTCTCCTCCTCAATCACACTGGAAATGATATCATCAAGGCTTAGCCATTCAGTTTTGGAGAATATTA
GCTGGCGGCGGAGATCAAACTCCTGATTTAGGCCATCAAGAAAGAGCTTTCCCACAAATGGTTCAAACCAGGTATGGTGA
ACAGCCACATCATTCTTGTCAACAGGTTGAAAAGGATGGTAATAATGCAACTCCCTATACAATCTCTTCATCTCACCTGC
ATACTCGGTCACTGATTTTGAGCCTTGCTTCAAGTTAGTCAACTCGTGCATGATGCGAGTAGCCTGCATCTTATTTGATT
TTCCTGAAAATTGCTTCTCCAAAGCTTTCCACACTTCAAATACAGAGGTCAAAGTCTCAACTTGTTCTCGTATCGGTGGT
TCCATGCTTCCTAATAACCACACCAAAACTCTATCATTGATCTGTTTGGTGATAGTACCACTTTTCAGTTTCTCTTCATC
GGCACTAAGCAATTCTTCATAGCCATGAGAACTCATAATTAACTGGGCATGTCGTGCCCAGCTGATATAATTGCCCGGTC
CAGCCAACTTCACTGGATTAGGCTCAAGTGCATACTTGACAGCTTCAGGAACCACTTTGAGTTGTTGCTGTTGCTGCTCA
AATACTTTGCTTAAAATTTCATACAACTTATCCACACTAGTATCCCCTGATTTCCCCTTTGTTGGATTTGCCATGATTTA
CCGCCACACAAAGAAAAAACCAGACACATAGGACTTGGTTTTTGCAGATCTCCACTAACAACAACACACATGCAGTACAA
GCA-----------GAGTAGATACTAGCCAAGCAGATATACTAGTGCAGGTTGCTCTCAAATGCACACAGACTGCACAAG
TATTTTAATCCGGCCACTAGGCAAAGATGAGCTATCCGGCTGCACTAATCACGGTTCTCCAACGGCAGCCACAAGTACTA
GTACCGGCTGCACTAATCAATGAAGTACA-GAAGACATCTTACTGCTTGGAGA--GACGGCACAACGGCAACCAGCAATT
TTTCCGCGGCAGCACAACATCCACTTCTCAGCACAGGGAGTAAGCACAGATGCACCGAGAGGCAGTC-AACAGGCTGCCT
TAGATTGGGCGCAGCACTCGGTGCCGTAGCTTGGAGATGATGTCGCAGGTCTCGGCGGCAGCTCGTGAACGATGCAGCTC
GAGTGCCCACAGCCGTAAATCATGGCGACACAGCACCGCAATTAGCCGTCACCAAGGTCGAAATCACACAGGATTAACCT
GCTCCGATGCCATGTTGAAAATCATCTGAGATTTGAGGGATTTGAGCTAGGGATTGGAGGGAG-
>SNPs
--SSSS-S-SSSSSSSS-SS-S-SSSSS-SSSS--SSSSS-SSSSSSSSSS-SSSS-S----------------------
-------------------------------------------------S------------------------------
-----------------------------------------------S--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------S---------------------------------------------------S-------------S------S
-----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------
-----S---------------------S------------------------------S-------S------SSS-SSS
SSSSSSSSS-SSS-S-SS-SSSSSS-S---S-----S----S-------S-----------------S-S---S------
--------------------------S--S--S--SSS-SSS----------S---------------S---S-------
--S-S------S--SS---S--------------------------S------S--------------S-S---------
---------------SSS--S--------S--S--------------SS-S-S---------------------------
-----------------------------------------------------------S--------------------
-----------S------------------------------S-------------------------------------
-----------------------------------------------S--------S--S---------S----------
--------------SSS-SSSS-SSSSSSSSSSSSSSSSSSSS-----------------SSSSSSSSSSSS--------
-S----------S--------S----------------S-------------------------SS-SS----S------
---S----------S-------------SS---------------S---------------S-------S---------S
S---------SS------S-------------S-S--S----------------SS-S------------S-----S---
-SS--------S------S----S-SS-S-----------------------S----------------------S----
--------------------S--------------------------------------S--------------------
------------------------S----------------------------------------S--------------
--------------------S--------------------------------------S-S------------------
------------------SS----------------S-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------S-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------S-------------------------------------S---------------------S-----------
--------------------------------S--S----------------------S---------------------
----------------------------------------------------------------
>forward_747
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------CAACGCCTGAGTTTGCAAGT-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------
>reverse_1676
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------CTGGG
TTGAGCAAGACGAGT-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------
