>input_sequence_87043
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------------------------------------------------------------ATGCTGGTGTTGGAGTTGGG
CACATGGGTCATCCCGCTGACCCTCGTCTTCGTCCAGTGCCGGCGCATCGTCCTCCTCCTGTCCAGGCTCCAGGAGCTTC
GCCGGACCATGATGCGCCCGAGGCTGGTGATCACCTCGCGGGAAGAGGACATGTGGAGCCGCCTGTCCAGGCTTAACTCC
ATGGCCTTCATGCTGTGA--------------------------------------------------------------
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>chr1B_1_TraesCS1B01G196100
GTTGGGGAGGTGCACGTCGCTCCACGGGAGCGGCATTCTCGTCTCCCAATAGCGGCGGCATACATCCGCGACGATGTACT
GCCGGTCGCGCTCGCCGGAGGCCGTAGGGCCGATGGTGAAGGGGGCAGGCGCGGGGGCCCGACACGGTGGTGATGCGGGC
TCCTCCTTC---ACGTCGCGGCGGCGGCGGCCCGAGGACGAGCCAGCCTCGCGGTCGTGCTTCCCCTTGCAGCCGTAGTT
CCATAGCCCCATGGCTGCGAGGCTTCCGGCCGCCGAGTTCGAGGCTAG------GGTTTGG---GGGTTTGGGGGTGTCG
GGTTTCAAGGAGGCCGTGGGGTTGAGT-GAGGA-GTGTGGACGATGACCGGTCCATGGCTTCC-CCATTTAAGAAGGACC
GTGACCATTCGCCTGGGCGGATGACATGTAAGGCTGGCCGCGCGTGCGCATTGGTGTTGGCGGGTGGGAGGTAGGTGGCC
GTCTGCCACGCGTCCCCGACGCGGACGAGCGACGTGTCCGTTTGCTGTCCGCCGCAACCCAAATCCGACGCATATTTGCA
TTCGAAATGGATCGACCGGAACATAAAACGGACAAAATGGATT-CGGACGTCACACGCTGGGCCGACCGGTTTA-TCCTT
TTATCCCAAAAGGACGAGACTGGACGGGATGGGGTCGTGTGGTGGAGTTGGCCTCATGCTACCATAGGTAGTGAAAGGAC
AAGGCAGCCTATGACGCTAAATGCAGTAGTTAATTTCGGATCACACACCAGTCACCGTCAAGTGGAGCGGGAAGGGAAAC
CACCTAGCCTGCCTCACTGTCACTGAGCTAGGACACATCACATGCCGCAGTAGATGGCGGGCATATCATATCAGGAAATC
AAGGCGGGTCGGATGGCGTGCCCTCCACTAGAGCCTATGTAGCCTAGCCCCGTTATATAAAGAGCATGGAGCTAGCGACC
GA-TGGGTGCGAGAGCAAAGCAC--TCCCACCATTTTTTTGCAGCGGCGGCGAAGCGAGGATGCTGGTGTTGGAGTTGGG
CACATGGGTCATCCCGCTGACCCTCGTCTTCGTCCAGTGCCGGCGCATCGTCCTCCTCCTGTCCAGGCTCCAGGAGCTTC
GCCGGACCATGATGCGCCCGAGGCTGGTGATCACCTCGCGGGAAGAGGACATGTGGAGCCGCCTGTCCAGGCTTAACTCC
ATGGCCTTCATGCTGTGACGGCGG---------GGTACTATGTGTGCCTGCTT-GCCCCTCTCCTCGTTTGTTGTTCGAT
GCCAAGTTGTTTTTGCTTCTTCTTTTCTTGGGCCTTGTATGTAT----CTGTAATAAGCTCGCGGTAGTTGAGATGTAGT
A--AGATGTATATATATT-GACGTAGCTTGGACTTTTTTTTTCTCGAATACGCACGAGTGTGCGTACTATATTATAAAGA
AGGGATCGGGGTAAAGAGCCCGTCCACGTTATCGCTACAGATTACATATATACACTGAACACTAACTCCA-CCCTCCACC
CTCCTCTCCTATGTCTACCTACGCTCCCCTGCCCACTCCTCCACCTCTGCAAAGAAAGCGTCCATGTCTCCTCGTAATAT
GCCCGCTTGCTTCCATATACGGCCCTCTCTGACTACTGCTCGGATGATCCTGTTCTTCGAAGGTGTGGCTCCGTCAAAGA
CGATCGAGTTGTGATTCTTCCATATCTGCCATAGCCCTAGAATGATGATTGCATTTGCATCCCTCTCGGCAGGCCTTCTT
CCTCCCTTGTCTTGACACCACGCCCCGAGGCTTTCACTCCCAGTAGGTATCCACTCTGGCTTGCGCAAGGGATGGCAGAT
CGCCGTCCACACTTCCCGCGCGACAACACACTCGAGTAGAACGTGGTTTATGCTCTCCTCTTCTTGGTTGCACATAGGG-
CAGCATTCTTGATGGTCCAGTCCACGTCTTGCTAGCCGATCGGATGTCCAGCACCTGTCTTGGGTTGCGAGCCATGTGAA
GAAACGACATGGCGCCGGTGCCCTTGATTTCCAAGTGAATTCGGCCGTCGGGACGACCTGCCTGCCCCAGGACTTGGCCG
CATAGGCGCTCCGCGCCGAGAAGCATCCGCTAGTTTCCCATGCCCAAGAGATGGCATCATTCTGCGCTGGGACAAGCTCG
ACTCGTTGGATCATCGTCCACAATTGTAGGTATTCACGCAATGATTCAGCAGTGACCTCCGGGCTCACCTGGGTGAC
>chr1B_1
GTTGGGGAGGTGGACATTGCTCTAGGGGAGCGGCCTCCTCGTCTCCCAATAGCGGCGGTATACATCAGTGTGGATGTAGT
GCTGGTCGCGCTCGCCGGCGGCCGTGTGGGCAATGGAGAATGCGGGCAGCAC-GGGGGCCGACGCGGTGGTGATGCGGGC
TCCTCCTTC---ACGCGGCAGCGGCGGCGGCCCGAGGACGAGCCAGCCTCGTGGCCGTGCTTACCCTTGCGGCCGTAGTT
CCAGAGCCCCATGGCTGCGATGCGGCCGGCCGGTGAGTTCGAGGCTAG------GGTTTGG---AGGTTTGGGGGTGTCC
GATTTCGAGGAGGCTGTGGGGTGGAAT-GGGGA-GTGTGGACGACGACCGGTCCATGGCTTCC-CCATTTAAGAAGGAAC
GCGACCGTTCGTCTGGGCGGATGATAGGCGGGGCCGGCCGCGCGTGCGCGTTGATGTTGGCGGGTGGGAGGTAGGTGGGC
GCCTGGCACGCGGCCCCGACGCGGACGAGCGACGCGTCCGTGTGCTGTCTGCCGCGACTCAAACCCGGCACATTTTTGCG
CTCGAAACGGGGCGGCACGGACACAAAACGGACAAGATGGGTCCGGACCGTCGCGTGCTGGGCCGACCGGTTTGTTCCTT
TTACCCCAAACGGATGAGGCCGGACGGGATGGGGTGGCACAGTGGAGTTGGC----------------------------
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>chr6D_1
GTTGGGGAGGTGGACATCGCTCCAGGGGAGCGGCGTCCTCGTCTCCCAATAGCGGCGGCATACGGCGGCCTCGATGTAGT
GCCGGTCGCGCTCGTCGGGGCCCGTGGGGGCGATGGAGAACGCGGGCGGCGCGGGGGCCCGACGCGGTGGTGATGCGGGC
TCCTCCTTCTTCACGGAGCCGCGGCGGCGTCCCGACGAGGAGCCAGCCTCCCGGTCGTGCTTCCCCTTGCGGCCGTAGTT
CCATAGCCCCATGGCTGCGAGGCTGCCGGCCGGCGAGTTCGAGGCTAG------GGTTTTG---GGGTTTGGGGTTGTCG
GGTTTCGAGGAGGCCGCGGGGTGGAGTGGGCGA-GTGTGGACGACGACCGGTCCACGGCTTCC-CCATTTAAGAAGGACC
GTGACCGTTCGCTTGGG-GGATGACAGGCGGGCCCGGCCGCGCGTGCGCGTTGATGTTGGCGGGTGGGAGGTAGGTGGCC
GCCTGCCACGCGGCCCCGACGCGGACGAGTGACGCGTCCGTTTGGTGTCCGCCGCGACCCAAACCCGGCACATGTTTGCG
CTCGAAATGGGTCGGCCCGGACACAAAACGGACCAGATGGGTCCGGGTCGTCACACGCTGGGCCGCCTCATTTGTTCCTT
TTACCCCAAACGGACGGGGCCGGACGGGATGGGGTCGCGCGGTGGAGTTGGCCT--------------------------
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>chr2D_1
GTTGGGGAGGTGCACGTCGCTCCACGGGACCGGCGTCCTCGTCTCCCAGTAGCGCTGTCATACATCAGCGCTGATGTACT
GCCGGTCGCGCTCGCCAGCGGCCCTAGGGCCGATGGTGAAGGGGGCAGGTGCGGGGGCCTGGCGCGGTGGCGATGCGGGC
TCCTCCTTCTTCACGGAGCCGCGGCGGCGTCCCGACGAGGAGCCAGCCTCGCGGTCGTGCCTCCCCTTGCGGCCATAGTT
CCATAGGCCCATGGCTGCGAGGCGGCCGGCCGGCGAGTTCGAGGCTAGAGGCTAGGTTTGG---GGGTCTGGGTGTGTCG
GGTTTCGAGGAGGCCGCGGGGTGGAGTGGGGGA-GTGTAGACGACGACCGGTCCACAGCTTCC-CCATCTAATAAGGACC
GCGACCGTTCGCCTGGGCGGATGACAGGCGGGGCCGGCCGCGCGTGCGCATTGATGTTGGCGGGTGGGAGGTAGGTGGCC
GCCTGCCACGCGGCCCCGACGCGGACGAGCGACGCGTCCGTTTGCTGTCCGCCGCGACTCAAACCCGGCGCATGTTTGCG
CTCGAAATGGGTCGGCCCGGACACAAAGCGGACCAGATGGGTCCGGGCCGTCGCGCGCTGGGCCGTCGCGTTTGTCCCTT
TTACCCCAAACGGACGGGGCCGGACGGGATGGGGTCGCGCGGTGGAATTGGCCT--------------------------
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>chr7D_1
GTTGGGAAGGTGGACATCGCTCTAGGGGAGCGACGTCCTCGTCTCCCAATAGCAGCGGCATACGGCCGCCTCGATGTAGT
GTCGGTCGCGCTCGCCGGCGGCCGTGGGGGCGATGGAGAACGCGGGCGGCGCGGGGGCCTGGCACGGTGGTGATGCGGGC
TCCTCCTTCTTCACGGAGCCGCGGCGGTGTCCCGACGAGGAGCCAGCCTCGCGGTCGTGCTTCCCCTTGCGGCCGTAGTT
CCATAGCCCCATGGCTGTGAGGCGGTCGGCCGGCGAGTTCGAGGCTAG------GGTTTGG---GGGTTTGGGGTTGTTG
GGTTTTGAGGAGGCCGCGGGGTGGAGTGGGGGA-GTGTGGACGACGACCGGTCCACGACTTCC-C-ATTTAAGAAGGACC
GCGACCATTCGCCTGGACGGATGACAGGCGGGGCCGGCCGTGCATCTGCATTGATGTTGGCGGGTGGGAGGTAGGTGGCC
GCCTGCCACGCGGCCC-GACGCGGACGAGCGACGCGTCCGTTTGCTGGCCGCCGCGACCCAAACCCGACGCATGTTTGCG
CTCGAAATGGGTCGGCCCGGACACAAAACGGACCAGATGGGTCCGGGCCGTCGCGCGCTGGGCTACCTCGTTTGTCCCTT
TTACCCCAAACGGACGGGGCCGGACGGGATGGGGTCGCGCGGTGGAGTT-------------------------------
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>chr7A_1
GTTGGGGAGGTGGACGTCGCTCCACGGGATCGGCGTCATCGTCTCCTAATAGCGCCGGCATACATCCGCGTTGATGTACT
GCCGGTTGCGCTCGCCGGCGGCCCTAGGGCCGATGGTGAATGGGGCAGGCGCGGGGGCCCGACGCGGTGGCGATGCGGCC
TCCTCT---TTCACGGAGCCGCGGCGGCGTCCCGAGGAGGAGCCAGCCTCGCGGTCGTGCTTCCCCTTGCGGCCGTGGTT
CCATAGCCCCATTGCTGCGAGGCATCCGGCCGGCGAGTTCGAGGACAG------GGAGAGGCTAGGGTTTGGGGGTGTCG
GGTTTCGAGGAGGCAGCGGGTTGGAAT-GGGGA-GTGTGGGCGACGACCGGTCCACGGCTTCCTC-ATTTAAAAAGGACG
GCGGCCATTCGCCCGGGCGGATGACAGGTGGGGCCAACCGCGTGTGCACATTAATGTCAAGCGGTGGGAGGTAGGTGGCC
GCCTGCCACGCGGCCCCGACGTGGACGAGCGCCGCGTCCATTTGCTGTCCGCCGCGACCCAAACCCGGCGCATGTTTGCG
CTCGAAATGAGTCGGCCCGGACACAAAACGGACCAGATGGGTCCAGGCCGTCGCGCGCTGGGCCGTCCGGTTTGTCCCTT
TTACCCCAAACGGACGGGGCTGGACGGGATAGGGTCGCGCGGCGGAGTT-------------------------------
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>chr1B_2
TTGGGG--GGTGCACGTCGCTCCACGGGTGCGGCGTCCTCGTCTCCCAATAACGCCGGCATACATCCGTCGTGATGTACT
ATCGGTCGCGCTTGCCGCTGGCCATAGGGCCGATGGTGAACGGGGCAGGCGCGGGGGCCCGACGCGTTGGTGATGCGGGC
TCCTCCTTC---ACGCCGTGGCGGCGGCGGCCCGAGGACGAGCCAGCCATGCGGTCGTGCTTCCTCTTGCGGCCATAGTT
CCAGAGCTCCATGGCTGCGAGGCGGCCGGCCGGCGAGTTTGAGGCTAG------GGTTTGG---GGGTTTGGGGGTGTCG
GGTTTCGAGGAGGCCGCGGGGTGGAGT-GGGGA-GTGTGGATGACTACCGGTCCACGGCTTCCCC-ATTTAAGAAGGACC
GCGACCGTTCGCCTGGGCGGATGACAGGCGGGGCCGGCCGCGCGTGCGCATTCATGTTGGCGGGTGGGAGGGAGGTGGCC
GCCTGCCATGCGGCCCCGACTCGGACGAGCGACGCATCCGTTTGCTGTCCGCCGTGACCCAAACCCGACGCATGTTTGCA
CTCGAAATGGGTCGGTCCAGACACGAAACGGACAAGATGGGTCCGGACTGTCGTGCGCT-GGCTGACCGATTTGTCTCTT
TTACCCCAAACAAACGGGACCGGACGCGATGGGGTCGCACGCTGGAGTTGGCCT--------------------------
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>chr5D_2
-TTGGGGAGGTGGACGTCGCTCCAGGGAAGCGGCGTCCTCGTCTCCCAATAGCGGCGGCATATGGCCGCCTCAATGTAGT
GCCGGTCGCGCTCGCCGGCGGCCGTGAGGGCGATGGAGAACGTGGGCGGTGCGGGGGCCCGACGCGGTGGTGATGCGGGC
TCCTCCTTCTTCACGGAGCCGCGGCGGCGTCCCGACGAGGAGCCAGCCTCGCGGTCGTGCTTCTTGTTGCGGCCGTAGTT
CCATAACCCCATGGGTGCGAGGCGGCCGGCCGGCGAGTTCGAGGCTAG------GGTTTGG---GGGTTTGGGGTTGTCG
GGTTTCGAGGAGGCCGCGGGGTGGAGT-GGGGGAATATGGACGACGACCGGTCCACGGCTTCCCC-ATTTAAGAAGGACC
GCGACCGTTCGCCTGGGCAGATGACAGGCGGGGCCGGCTGCGCGTGCGCATTGATGTTGGCTGGTGTTAGGTAGGTGGCC
GCCTGCCACGCGGCCCTGACGCGGACGAGCGACGCGTCCGTTCGCTGTCCGCCGCGACCCAAACCCGACGCATGTTTGCG
CTCGAAATTGGTCGGCCCGGACACAAATCGGACCAGATGGGTCCGGACCGTCGCGCGCTGGGCCGCCTCGTTTGTCCTTT
TTACCCTAAACAGACGGAGCCAAACGGGATGGGGTCGCCCGGTGGAGTTGGCC---------------------------
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>chr4B_2
-TTGGGGAGGCGCACGTCGCTCCACGGGAGCGGCGTCCTCGTCTCCCAATAACACCGGCATGCATCCACGGCGATGTACT
GCCGGTCGCGCTTGCCGCCGG-CGTAGGGGCGATGGTGAATGGGGCAGGCGCGAGGGGCCGGCGCGGTGGTGATGCGGGC
TCCTCCTTC---ACGCCACGGCGACGGCGGCCCGAGGATGAGCTAGCCTCGCGATCGTGCTTCCCCTTGCGGCCGTACTT
CCAGAGCCCCATGGCTGCAAGGCGGTCGGTCGGCGAGTTCGAGGCTAG------GGTTTGG---GGGTTTGGGGGTGTCG
GGTTTCAAGGAGGCCGCGGGGTGGAGT-GGGGA-GTGTGGACGACAACCGGTCCACGGCTTCCCC-ATTTAAGAAGGACC
ACGACCGTTCGCCTGGGCTTATGACAGGAGGGGCCGTCCGCGTGTGCGCATTAATATTGGCGGGTGGGATGTAGGTGGCC
ACCTGCCACGCGACACCGACGCGGACGAGCGACGCGTCCGTTTGCTATCCGCCGCGACCCAAACCCGGAGCATGTTTGCG
CTCGAAATGGGTCGGCCCGGACACAAAACAGACAAGATGAGTCCGGGCCGTCGCGTGCTGGGCCGACCGGTTTGTCCCTT
TTACCCCAAAAGGACGGGTCCGGACGGGATGGGGTCGCGCGGTGGAGTTGGCCTCATG----------------------
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>chr4D_2
-TTGGGGAGGTGGACGTCGCTCCA-GGGAGCGGCGTCCTCGTCTCCCAGTAGCGGCGGCATACAGCTGCCTCGATGTAGT
GGCGGTCGCGCTCGCCGGCGACCGTGGGGGCGATGGAGAACGCGGGCGGCACGGGGGCCCGACGCGGTGGTGATGCGGGC
TCCTCCTTCTTCACGGAGCCGCGGCGGCGCCCCGACGAGGAGCCAGCCTCGCGGTCGTGCTTCCCGTGGTGGCCGTAGTT
CCATAGCCCCATGGCTGCG-GGCGGCCGG-CGGCGAGTTCGAGGCTAG------GGTTTGG---GGGTTTGGGGTTGTCG
GGTTTCGAGGAGGCCGCGGGGTGGAGT-GGGGAAGTGTGGACGACAACCGGTCCACGGCTTCCCC-ATTTAAGAACGACC
GCGACCGTTCGCATGGGCGGATGACAGGCGAGGCCGGCCGCGCATGCGCATTGATCTCCGGTGGTGGGAGGTAGGTGGCC
GCCTGCCACGCGGCCCCGACGCGGACGAGCGACGCGTCTGTTTGCTGTCCGCCGCGATCCAAACCCG-CGCATGTTTGAG
CTCAAAATGGGTCGGTCCGGACACAAAACGGACCAGATGGGTGCCGGCCGTCGCGCGCTGGGCCACCTCGTTTGTCCCTT
TTACCCTAAACGGACGGGGCCGGACAGGATGAGGTCGCGTGGTGGAGTTGGCCTCAAGCT--------------------
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>chr1A_684
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------------------------------------------------------------ACCAAAGGCAGTGAAAGGAC
AAGGCAGCCTATGACCCTAAATGCACTATTTAATTTCAGATCACACACCGGTCACCGTCATGTGGAGTGGGAAGGGAAAC
CACCTAGCCTACC------TCACTGAGCTAGGACACAGCACATTCCGCAGTAGATGGCGGGCATATCATATCAGGAAATC
AAGGCGGATCGGACGGCGTGCCCTCCACTAGAGCCTAGCTAGCTGAGCTCCGTTATATAAAGAGCATGGAGCTAGCGACC
CGGTGGGTGCGAGAGCAAAGCACAGTCCCACCATTTTTTTGCAGCGGCGGCGAAGCGAGGATGCTGGTGGTGGAGCTGGG
CATATGGGTCATCCCGCTGACCCTCGTCTTCGTCCCGTGCCGGCGCATCGTCCTCCTCCTGTCCAGGCTCCAGGAGCTTG
GACGGACCATGATGCGCCCGAGGCTGGTGATCAGCTCGCGGGAAGAGGACATGTGGAGCCGCCTGTCCAGGCTTAACTCC
ATGGCCTTCATGTTGTGATGTGACGGCGGTGATGGTACTATGTGTGCCTGCTT-GCCCCTCTCCTCGGTTGGTGTTCGAT
GCTAAGTTGTTTTTGCTTCTTCTTTTCTTGAGCCT----TGTATGTATCTGTAATAAGCTCACGGTAGTTGAGATGTATT
A--AGATGTATATATATTTGGCGTAGCTTGGACTTT--------------------------------------------
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>chr1D_827
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-------------------------------------------GCCGCGGTAGATGGCGCGCGCATCATATCAGGAAATC
AAGGCGGGCCGGATGGCGTGCCCTCCACTAGAGCCTAGCTAGCTGAGCTCCGTTATATAAAGAGCATGGAGCTAGCGACC
CGGTGGGTGCGAGAGCAAAGCACACTCCCACCATTTTTTTGCAGCAGCGGCGGAGCGAGCATGCTGGTGGTGGAGCTGGG
CATATGGGTCATCCCGCTGACCCTCGTCTTCGTCCCGTGCCGGCGCATCGTCCTCCTCCTGTCCAGGCTCCAGGAGCTTC
GCCGGACCATGATGCGGCCGAGGCTGGTGATCACCTCGCGGGAAGAGGACATGTGGAGCCGCCTGTCCAGGCTTAACTCC
ATGGCCTTCATGCTGTGACGGCGG---------GGTACTATGTGTGCCTGCTTTGCCCCTCTCCTCGTTTGCTGTTCGAT
GCCAAGTTGTTTTTGCTTCTTCTTTTCTTAAGCCT----TGTAT----CTGTAATAAGCTCGCGGTAGTTGAGATGTAGT
ATAAGATGTGTATATATT-GGCGTAGCTTGGACTTT--------------------------------------------
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>chr5D_1354
GACA----------------------------------------------------------------------------
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----------------------------------TTTTTTTTCTCGAATACGCACGAGTGTGTGTACTATATTATAAAGA
AGGAATCGGGGTAAAGAGCCTGTCCACGTTAGCGTTACAGATTACATATATACACTGCACACTAACTCCA-CCCTCCACC
TCTCTCTCCTAAGTTTACCTACGCTCCACTGCCCACTCCTCCACTTCTGCAAAGAAAACGTCCATGTCTCCTTGTAGTAT
GCCCGCTTGCTTCCATACACGGCCCTCTCGGACGACTGCTTGTATGATCCTGTTCTTTGAAGGTGTGGCTCCATCAAAAA
CGATAGAGTTGCGATGCTTCCATATCTGCCATAGCCCTAGAATGATGATTGCATTTGCATCTCTCTCGGCATGCCCTCTT
CCTCCCTTGCCTTGACATCATGCCCCAAGGCTTTCGATCGCAGTAGGTATCCACTCCGGCTTGCGCAAGGGATGGCAGAT
GGCTGTCCACACTTCCCGTGCGACGACACACTGAAGTAGAACGTGGTTTATGCTCTCCTCTTCTTGGCTGCACATTGGG-
CAGCAGTCTTGATGATCAAGTCCACGTCTTGCTAGCCGATCGGATGTCCAGCACCTGTCCTGGAGTGCGAGCCATGTGAA
GAAGCGACATGGTGCCGGTGCCCTTGATTTCCATGTGAATTCAGCCATGGGTACGACCTGTCAGCCCCAGAACTTGGCTG
CGTAGGCGGTTCGCGCTGAGTAGCATCCACTTGCTTCCCAAGATCAAGAGATGGCATCGCTCTGTGCTGGGTCAAGCTCG
ACCCTTTGGGTCATGGTCCACAACTGCAGGTATTCACGTAACGATTTAGCCGTGACCTCCGGGCTCACTTGGGTGAC
>chr3B_1356
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--------------------------------CTTTTTTTTTCTCGAATACGCACGAGTGTGCGTACTATATTACAAAGA
AGGAATCGGGGTAAAGAGCCCGTCCACGTTAGCGTTACAGATTACATATATACACTGCACACTGACTCCA-CCCTCCACC
TCTCTCTCCTATGTCTACCTACGCTCCACTGTCCACTCCTCCACTTCCGCAAAGAAAGCGTCCATGTCTCCTCGTAGTAT
GCCCGCTTGCTTCCATATACGGCCCTCTCGTATGAATGCTTGTATGATCCTGTTCTTTGAAGGTGTGGCTCAGTCAAAAA
CGATAGAGTTGCGGTGCTTCCATATCTGCCATAGCCCTAGAATGATGATTGCATTTGCATCTCTTTCGGCATGCCTTCTT
CCTCCCTTGCCTTGACACCATGCCCCGAGGCTTTCAATCGTAGTAGGTATCCACTCCGGCTTGCGCAAGGGATGGCAGAT
CGCCGTCCACACTTCCCGTGCGACGACACACTGAAGTAGAACGTGGTTTATGCTCTCCTCTTCTTGGCTGCACATTGGG-
CAGCAGTCTTGATGATCCAGTCCACGTCTAGCTAGCCGATCGGACGTACAGCACCTGTCCTGGATTGCAAGCCATGTGAA
GAAGCGACATGGCGCCGGTGCCCTTGATTTCCATGTGAATTCAGCCGTGGGGACGACCTGCCGGCCCCAAAACTTGGCTG
CATAGGCAGTCCGCGCTGAGTAGCATCCGCTTGCTTCCCATGACCAAGAGATGGCATCGCTCTGTGTTGGGTCAAGCTCG
ACTCTTTGGATCATTGTCCACAACTGCAGGTACTCGCGTAACGATTCAGAAGTGACCTCTGGGCTCACTTGGGTGAC
>chr4A_1357
--------------------------------------------------------------------------------
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---------------------------------TTTTTTTCTCTCGAATACGCACGAGTGTGCGTACTATATTATAAAGA
AGGGATCGGGATAAAGAGCCCGTCCACGTTAGTGTTACAGATTACATATTTACACTGAACACTAACTCGA-CACTCCACC
TATCTTTCCTAAGTCTACGTACTCTCCCCTGCCCACTCCTCCACCTCTGCAAAGAAGGCGTCCATGTCTCCTTGCAGTAT
GCCCGCTTGTTTCCATATACGGCCCTCTCGGATGACTGCCTGGATGATCCGGTTCTTCGAGGGTGTGGCTCCGTCAAAGA
CAATCGAGTTGTGATGCTTCCAAATCTGCCATAGTCCTAGAATGATGATTGCGTTGGCATCCCTCTCGGCAGGCCTTCTT
CCTCCCTTGTCTTGACACCACGCCCCGAGGCTTTCCCTCGCAGAAGGTATCCACTCCGGCTTGCGCAAAGGGTGACAGAT
CGCCGTCCACACTTCCCATGCGACAACACACTCAAGGAGGACGTGATTTATGCTCTCCTCTTCTTGGCTGCACATAGGG-
CAGTACTCTTGATGGTCCAGTCCACGTCTTGCTAGCCGGTCGGATGTCCAGCACCTGTCCTGGATTGCGAGCCATGTGAA
GAAACGGCATGTCGCCGGTGCCCTTGATTTCCAAGTGAAAGCGGCCGTGGGAACGACCTGCCTGCCCCAGAACTTGGCCG
CATAGGCGCTCCGCGCTGAGAAGCATCTGCTAGCCTCCCATGTCCAAGAGATGGCATCATTTTGTGCTGGGTCCAGCTCA
ACTCGTTGGACCATCGTCCATAATTGCAGGTATTCACGCAACGATTCGACAGTGACCTCCGGGCTCACCTGGGTGAC
>chr1B_1359
TTA-----------------------------------------------------------------------------
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--------------------------------------TTTTCTCGAATACGCACGAGTGTGCGTACTATATTATAAAGA
AGGGATCGGGGTAAAGAGCCCGTCCACGTTAGTGTTATAGATTACATATATACACTGAACGCTAACTCCA-CTCTCCACC
CTCCTCTCCTATGACTACGTACTCTCCCCTGCCCACTCCTCCACCTCTGCAAAGAAGGCGTCCATGTCTCCTCGTAATAT
GCCTGCTTGCTTCCATATACGGCCCTCCCTGACTACTGCTCGGATGATCCTGTTCTTCGAAGCTGTTGCTCCGTCAAAGA
CGATCGAGTTGCGATGCTTCCATATCTGCCATAGCCCTAGAATGATGATTGCATTTGCATCCCTCTCGCCAGGCCTTCTT
CCTCCCTTGTCTTGACACCACGCCCCGAGGCTTTCACTTCCAGTAGGTATCCACTCCGGCTTGCGCAAGGGGTGGCAGAT
CACCATCCACACTTCCTGCGTGACAACACACTCAAGTAGAACGTGGCTTATGCTCTCCTCTTCTTGGCTACACATAGGG-
TAGCGCTCTTGATGGTCTAGTCCACGTCTTGCTAACCGATCGGATGTCCAGCACCTGTCTTGGGTTGCGAGCCATGTGAA
GAAATGGCATGGAGCCGATGCCCTTGATTTCCAAGTGAATTCGGCCATGGGGACGACCTGCCTGCCCCAAAACTTGGCCG
CATAGGCGCTCTGCGCTGAAAAGCATCCGCTAGTTTCCCATGCCCAAGAGATGGCATCACTCTGCGCTGGGACAAGCTCG
ACTCGTTGGATCATCGTCCACAATTGCAGGTATTCACGCAACGATTCAGAAGTGACCTCTGGGCTCACCTGGGTGAC
>chr5B_1359
--------------------------------------------------------------------------------
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-----------------------------------TTTTTTTCTCGAATACGCACGAGTGTGCGTACTATATTATAAAGA
AGGGATCGGGGTAAAGAGCCCGTCCACGTTAGTGTTACAGATTACATATTTACACTGAACACTAACTCCA-CACTCCACC
TATCTCTCCTAAGTCTACGTACTCTCCCCTGCCCACTCCTCCACCTCGGCAAAGAAGGCGTCCATGTCTCCTCACAGTAT
GCCCGCTTGTTTCCATATACGGCCCTCTCGGATGACTGCCTGGATGATCCGGTTCTTCGAGGGTGTGGCTCCGTCAAAGA
CGATCGAGTTGCGATGCTTCCAAATCTGCCATAGTCCTAGAATGATGATTGCGTTAGCATCCCTCTCAGCAGGCCTTCTT
CCTCCCTTGTCTTGACACCACGCCCCGAGGTTTTCCCTTGCAGAAGGTATCCACTCCGGCCTTCGCAAAGGGTGACAGAT
CGCCGTCCACACTTCCCGTGCGACAACACACTCAAGGAGGACGTGATTTATGCTCTCCTCTTCTTGGCTGCACATAGGG-
CAGTACTTTTGATGGTCCAGTCCACGCCTAGCTAGCCGGTCGGATGTCCAGCACCTGTCCTGGATTGCAAGCCACGTGAA
GAAACGGCATGGCGCCGGTGCCCTTGATTTCCAAGTGAAAGCGGCCGTGGGAACGACCTGCCTGCCCCAGAACTTGGCCG
CATAGGCGCTCCGCACTGAGAAACATCTGCTAGCCTCCCATGTCCAAGAGATGGCATCATTTTGTGCTGGGTCCAGCTCA
ACTCGTTGGATCATCGTCCACAATTGCAGGTATTCACGCAACGATTCAGCAGTGACCTCTGGGCTCACCTGGGTGAC
>chr1B_1360
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------------------------------------TTTTTTCTCGAATACGCACGAGTGTGCGTACTATATTATAAAGA
AGGGATCGGGGTAAAGAGCCCGTCCATGTTAGTGTTACAGATTACATATTTACACTGAACACTAACTCCA-CACTCCACC
TTACTCTCCTAAGTCTACGTACGCTCCCCTGCCCACTCCTCCACCTCAGCAAAGAAGGCGTCCATGTCTCCTCGCAGTAT
GCCCGCTTGTTTCCATATACGGCCCTCATGGATGACTGCCTGGATGATCCGGTTCTTCGAGGGTGTGGCTCCGTGAAAGA
TGATCGAGTTGCGATGCTTCCAAATCTGCCATAGTCCTAGAATGATGATTGCATTGGCATCCCTCTCGGCAGGCCTTCTT
CCTCCCTTGTCTTGGCACCACGCCCCGAGGCTTTCCCTCGCAGAAGGTATCCATTCCGGCTTGCGCAAAGGATGACAGAT
CGCCGTCCATACTTCCCGTGCGACAACACACTCAAGGAGGACGTGATTTATGCTCTCCTCTTCTTGGCTGCACATAGGG-
CAGTACTCTTGATGGTCCAGTCCATGTCTTGCTAGCCGATCAGATGTCCAACACCTGTCCTGGATTGCGAGCCATGTGAA
GAAACGGCATGGCGCCGGTGCCCTTGATTTCCAAGTGAAAACGGCCGTGGGAACAACCTGCCTGCCCCAGAACTTGGCCG
CATAGGCGCTCCGCGCTGAGAAGCATCTGTTGGCCTCCCATGTCCAAGAGATGGCATCATTTTGTGCTGGGTCCAGCTCA
ACTCGTTGGATCATCGTCCACAATTGCAGGTATTCACGCAATGATTCAGCAGTGACCTCCGGGCTCACCTGGGTGAC
>chr7B_1360
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------------------------------------TTTTTTCTTGAATACGCACGAGTGTGCGTACTATATTATAAAGA
AGGGATCGGGGTAAAGAGCCCGTCCATGTTAGTGTTACAGATTACATATATACATTGTACACTAACTCCA-CCCTCCACC
GCTCTCTCTTATGTCTACCTACGCTCCACTGCCCACTCGTCCACCTCTGCAAAGAAGGCGTCCATGTCTCCTCGTAGAAT
GCCCGCTTGCTTCCATATACGGCCCTCTCGGACGAATGCTTGAATTATCCTGTTCTTTGAAGGTGTGGCTCCGTCAAAAA
CGA-AGAGTTGCAATGCTTCCATATTTGCCATAGTCCTAGAATGATGGCTGCATTTGCATCCCTCTCGGCATGCCTTCTT
CCTCCCTTGCCTTGACACCATGACCCGAGGCTGTCAATCACAGTAGGTATCCACTCCGGCTTGCGCAAGGTATGGCCGAT
CACTGTCCACACTTCCCGTGCGACAACACACTAAAGTAGAATGTGGTTTATGCTCTCCTCTTCTTGGCTGCACATAGGG-
CAGCAGTCTTGGTGATCCAGTCCACGTCTTGCTAGCCGATCGGACGTCCATCATCTGTCCTGGATTGCGAGCCATGTGAA
GAAACAACATGGCGCTGGTGCCCTTGATTTCCATGTGAATTCGGCCGTGGGGACGACCTGCCGGCCCCAAAACTTGGCTG
CATAGGCGGTCCGTGCTGAGTAGCATCCGCTTGTTTCCCATGTCCAAGAGATGACATCATTCTGTGCTGGGTCAAGCTCG
ACTCCTTGGATCATCGTCCACAATTGCAGGTATTCACATAACGATTCAGAAGTGACCTCCGGGCTCACCTAGGTGAC
>chr5B_1361
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-------------------------------------TTTTTCTCTAATACGCACGAGTGTGCGTACTATATTATAAAGA
AGGAATCGGGGTAGAGAGCCCGTCCACGTTAGCGTTACAGATTACATATATACACTGCACACTAACTCCA-CCC-CCACC
TTTCTCTCCTATGTCTACCTACGCTCTACTGCCCACTCCTCCACTTCTGCAAAGAAAGTGTCCATGTATCCTTGTAGTAT
GCCCGCTTGCTTCCATACACGGCCCTCTCGGACGACTGCTTGTATGATCTTGTTCTTTGAAGGTGTGGCTCCGTCAAAAA
CGATAGAGTTGCGGTGCTTCCATATCTGCCATAGCCCTAGAATGATGATTGCATTTGCATCCCTCTCGGCATGTCCTCTT
CCTCCCTTGCCTTGACACCATGCCCCGAGGGTTTCGGTCGTAGTAGGTACCCACTCCGGCTTGCGCAAGGGATGGCAGAT
CACCGTCCACACTTCCCGTGCAACGACACACTGAAGTAGAATGTGGTTTATGCTCTCCTCTTCTTGGTTGCACATTGGG-
CAGCAGTCTTGATGATCTAGTCCATGCCTTGCTAGCCGATCGGGCGTCCAGCACCTGTCTTGGATTGCGAGCCATGTGAA
GAAGCGACAGGGCGCTGGTGCCTTTGATTTCCATGTGAATTCGGCCGTGGGGACAACCTGCCGGCCCCAGAACTTGGCTG
CATAGGCAGTCCGCGCTGAATAGCATCCGCTTGCTTCCCATGACCAAGAGATGGCATCGCGCTGTGTTGGGTCAAGTTCG
ACCCTTTGGATCATGGTCCACAACTGCAGGTACTCACGTAACGATTCAGCAGTTACCTCCGGGCTCACTTGGGTGAC
>chr7B_1391
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-------------------------------------------------------------------TATATTATAAAGA
AGGGATCGGGGTAAAGAGCCCGTCCACGTTAGCGTTACAGATTACATATATACACTGTACACTAACTCCACCCT-CCACC
TCCCTCTCCTATGTCTACTGACGCTCCACTACCCACTCCTCCACCTTTGCAAAGAAAGCGTCCATGTCTCCTTGTAGTAT
GCCCGCTTGCTTCCATATACGGCCCTCACGGGCGACTGCCTGGATGATCCTGTTCTTTGAAGGTGTGGCTCCATCAAAAA
CGATAGAGTTGCGATGCTTCCATATCTGCCATAGCCCTAGAATGATGATTGCATTTGCATCTCTCTCGGCATGCCTTCTT
CCTTCCTTGCCTTGACACCATGCCCCGAGGCTTTCACTCACAGTAGGTATCCACTCCGGCTTGCGCAAGGGATGGCAGAT
CGCCGTCCACACTTCCCGTGCGATAACACACTGAAGTAGAACGTGGTTTATGCTCTCCTCGTCTTGGCTGCACATAGGGG
CAGCAGTCTTGATGATCCAGTCCACGTCTTGCTAGCCGATCGGACGTCCAACACCTGTCCTGGATTGCGAGCCATGTAAA
GAAGCGACATGGCGCCGGTGCCCTTGATTTCCATGTGAATTCGGCCGTGGGGATGACCTGCTGGTCCCAAAACTTGGCTG
CATAGGTGCTCCGCGCAGAATAGCATCCGCTTGTTTCCCATGCTCAGGAGATGGCATCATTTTGTGCTGGGTCAAGCTCG
ACTTGTTGGATCATCGTCCACAATTGTAGGTACTCATGCAACGATTCAACAGTGACCTCCGGGCTCACCTGGGTGAC
>SNPs
----------------------------------S-S---------------------------------S---------
------------------S-------------------------------------------------------------
---------------S------------------------------------------------------S---------
--------------------------------S-----------------------------------------------
----------------------S------S--------------S-----------------------------------
--------------------------S--S----S------------------S--------------------------
-S----------S---------------------S--------------------S-------S---------S------
S---------S---S--S-S---S-----------S----S-S----S-------------------------S------
---S---------------------------------S--------------------------S---S-----------
---------------S---------S--S--------S-----------S----------S------S------------
----------S--SSSSSS------------------S------------------------------------------
-------------------------------------SS----SS---S-------------------------------
SS-------------------------------------------------------------------S-----S----
--S--------------------------------S--------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------S--------
------------------------------S----SSSS-----------------------------------------
--------------------S-----------------------------------------------------------
-------------------------------S--S---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------S----------------------------------------------------------------
--------------------------------------------------------S-----------------------
---------------------------------S----------------------------------------------
-----S--------------------------------------------------------------------------
------------------------------------------------S---------------------S---------
----------------S---------------------------------------------------------------
-----------------------------------------------------------------------------
>forward_435
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---------------GGCGGATGACATGTAAGGCT---------------------------------------------
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>reverse_1926
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-----TTCTTGATGGTCCAGTCCACG------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------
