>input_sequence_87021
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ATGGGTGGAGAACCCGTCGCTGTCTCGGCTGTGATACCGGAGGCTCTAGGGAAGTCGAAGGAGACAGCACTCATCTTGGG
GTGGGCTTACTACTTATATGCTTTCAGCAGTTATCCTCTCCGCACTTGGCTACCCAGCGTTTACCGTAGGCACGATAACT
GGTACACCAGAGGTGCGTCCTTCCCGGTCCTCTCGTACTAG---------------------------------------
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>chr7A_1_TraesCS7A01G069400
CCTGATAACAACTATTTAATAACCCACTTATTCATTTTCTTTGTCGGCGGGCACGGCTTGGGCAAAGTTCATCAGCGTCA
CTCCAGGCCAATGGAAACGAAATCTGAAATGGTATCGACCCATGGTAAGTAATTAAGTAGTACTAGCTAGCT----GCCA
TCTCTTTAATTATCATGCTTAATTAATTATTATATGATCAAATTCCATTCTCGTAAAATCCCTGAAGCAGGCGCCGGGGA
ATAATCTATGTGCATACTATGTTTGTGAGAACATTCGCATGATGGCGTCCGAAAGGAGCAGATCTCAAAGACAGGAGTGG
GTACGTTTGTCAGAACACTATTCACAATTTTTACACCATTATCAATAT--CTAGTCACACAACTAATACACATGCATATT
GATCTCCTTCT----AATAGTTCAAAGAGGTGCCGGAGAAGCTCCTACCAGAGGACCGCATAGAAGCAATTCAAGAGGAA
ATAGCGGGATTTTTGCTCGACCAGGTCATAGATCCCAAAGGAGAATACTTTTACCCGCTACCGCCCCCATGAACCACTTC
CAATTGTTATCGTGCTCCGAAGGCACCAATTAGGAGAAATTGTATATAGCTAGCTAATTG--------------------
--TATG--------TATGTATATATATATATATATATATATATATATATATATATATATATATACATAAACACTATTCTG
ATCACGGGATCAGAATAATATTCTGATCACAACATGAACTTCCCGAGTAACGCGCTTGACCTTCCCCGAGTACTAGGTTG
AACTTCAGCTAGAAGGTGTCCAAATGGGGCTTGCGATATACCGTTGGATAGCTATTGATATCAGTATCATGACCCAAGTT
AATCGATTTGATCAGGCCGTGTAGGAACAAGGTTCAAATCGTTCGTTCATTAGGATGCCTCAGCTGCATACATCACTGCA
CTTCCACTTGACACCTATTTAAATGGCTCGTCTCGCCGCTACCTTATCCTATTTCCATACTTATGTCGCTCCATCCCCGT
ATGGGTGGAGAACCCGTCGCTGTCTCGGCTGTGATACCGGAGGCTCTAGGGAAGTCGAAGGAGACAGCACTCATCTTGGG
GTGGGCTTACTACTTATATGCTTTCAGCAGTTATCCTCTCCGCACTTGGCTACCCAGCGTTTACCGTAGGCACGATAACT
GGTACACCAGAGGTGCGTCCTTCCCGGTCCTCTCGTACTAGGGAAAGGTCCTCTCAATGCTCTAACGCCCACACCGGATA
TGGACCGAACTGTCTCATGACGTTCTGAACCCAGCTCACGTACTGCATTAATGGGCGAACAGACTTTTGGGAAAATGTAA
GCGGTTTAAGAGCAGTTTTGAAAACCGTTTTTTCTTCATACAAAAATGTGAATCATATTTTCGATCGCATTTTTAAACCG
TTTATCAGAATGAGGCAAATAATATGGCGTTGGAAAGCTGCTGCAAAACCGCTCGTTCCACATGTTGAAAGTTTTTCTCT
AATTCCCTACGGTTAAAGAGTAATTCGGAAAATCGTAGAATTTCGCAAATGAAACACCCGAGTTTGTATTTTCGATGCCA
TTTCTAAACGGCTAATCCAATTGAGGCAAATAATATGGCGTTGAAAGCTTATGAAAATGCGTTACTTTTTCATGTTAAAA
GTTTTTTCTAATTTTGAACGGTTTAAAAGTAATTTAGAAAATGGTACAAGTTCCACCGAGTTCGTATTTTCGAGCTAATT
TTTTAATCGTACGTCCAAATGCAGCAAATGATATGGCATTGGAAAGCTTGAAGAAATGCGAAAATGGTTTTATGTCATGA
CACAAATGATATTTCTACCGTTTTGAAGTAAATTAGAAAATGATGAGATCATGATTTCTGCCTTCATCGCGAATGGAAAT
GCACTACGTGAAGTAGTTGCACTTCTTGGGCATGTTTGTTTGAACTTCACACTATTTTTTGACGTGTTGTTTTTTGCACT
GCGTGAAGTAGTTGAACTTCTAGGACATGTCTATTTGAACTTCACTCTATTTTTAACGTGTTGTTTTTTTGATGTGTTGT
TTCCTGCACTGTGTGAAGTAGTTGAACTTCTAGGACATGTATGTTTGAGCTTCACTCTTTTTCACTTTATTGTATTTTTT
TATATGAAATACACACCATGTAGTACGTGAACTTCCTATTGTTATCACTTTGAACTTCTCTCTAGTTTGAGAGAATTATT
T
>chr7A_1
CCTGATAACAACTATTTAATAACCCATTTATTCATTTTCTTTGTCGGCGGGCAGGGCTTGGGCAAAGTTCATCAGCGTCA
CTCCAGGCCAATGGAAACGAAATCTGAAATGGTATCGACCCATGGTAAGCAATTAAGTAGTACTAGCTAGCT----GCCA
TCTCTTTAATTATCATGCTTGATTAATTATTATCTGATCAAATTCCATTCTCGTAAAGGCCCTGAAGTAGGCGCCGGGGA
ATAATCTGTGTGCATACTATGTTTGCGAGAACATTCGCATGATGGCGTCCGAAAGGAGCAGATCTCAAAAACAGGAGTCA
GTACGTTTGTCAGAACACTATTCACAATTTTTACGCCATTATCG--ATATCTAGTCACACAACTAATACACATGCATATT
GATCTCCTTCTT---AACAGTTCAAAGAGGTGCGGGAGAAGCTCCTACCAGAGGACCGCATAGAAGCAATTCAAGAGGAA
ATAGCGGGATTTTTGCTCGACCAGTTCATAGATCCCAAAAGAGAATTCTTTTACCTGCTACCGCTCCCATGAACCACTTC
CAATTGTTATCGTGCTCCGAAGGCACCAATTAGGAGAAATTGTATATAGCTAGCTAATTG--------------------
--TGTG--------TGTGT-------------------------------------------------------------
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>chr7A_1
CCTGATAACAACTATTTAATAACCCATTTATTCATTTTCTTTGTCGGCGGGCAGGGCTTGGGCAAAGTTCATCAGCGTCA
CTCCAGGCCAATGGAAACGAAATCTGAAATGGTATCGACCCAAGGTAAGTAATTAAGTAGTACTAGCTAGCT----GCCA
TCTCTTTAATTATCATGCTTGATTAATTATTATCTGATCAAATTCCATTCTCGTAAAGGCCCTGAAGCAGGCGCCGGGGA
ATAATCTGTGTGCATACTACGTTTGCGAGAACATTCGCATGATGACGTCCGAAAGGAGCAGATCTCAAAGACAGGACTGA
GTACGTTTGTCAAAACACTATTCACATTTTTTACACCATTATCGATATATCTAGTCACACAACTAATACACATGCATATT
GATCTCCTTCTT---AACAGTTCAGAGAGGTGCGGGAGCAGCTCCTACCAGAGGAGCGCATAGAAGCAATTCAAGAGGAA
ATAGATAGATTTTTGCTCGACCAGGTCATAGATCCCAAAGGAGAATACTTTTACCCGCTACCACCCCCATGAACCACTTC
CAATTGTCATCGTGCTCCGAAGGCACCAATTAGGAGAAATTGTATATAACTACCTAATTG--------------------
--TATA--------CATATATACATGTGTGTATATAT-------------------------------------------
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>chr3A_1
CCTGATAACAACTATTTAATAACTCATTTATTCATTTTCTTTGTCGGCGGGCAAGGCTTGGTCAAAGTTCATCAGCGTCA
CTCCAGGCCAATGGAAACCAAATCTGAAATGGTATCGACCCCAGGTAAGTAATTAAGTAGTACTAGCTAGCT----GCCA
TCTCTTTAATTATCATGCTTGATTAATTATTATCTGATCAAATTCCATTCTCGTAAAGGCCCTGAAGCAGGCGCCGGGGA
ATAATTTGTGTGCATACTACGTTTGCGAGAACATTCGCATGATGGCGTCCGAAAGGAGCAGATCTCCAAGACAGGAGTGG
GTACGTTTGTCAGAACACTATTCACAATTTTTACACCATTATCGA--TATCTAGTCACACAACTAATACACATGCATATT
GATCTCCTTCTT---AACAGTTCAAAGAGGTGCGGAAGAAGCTCCTACCCGAGGACCGCATAGAAGCAATTCAAGAGGAA
ATAGCGGGATTTTTGCTCGACCAGGTCATAAATCCCAAAGGAGAATACTATTACCCGCTATCGCCCCCATGAACCACTTC
CAATTGTTATCGTGCTCCGAAGGCACCAATTAGAAGAAATTGTATATAGCTAGCTAATTG--------------------
--TGTA--------TATATATATATATATATATATATATATATATATAT-------------------------------
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>chr3A_1
CCTGATAACAACTATTTAACAACCCATTTATTCATTTTCTTTGTCGGCGGGCAGGACTTGGGCAAAGTTCATCAGGGTCA
CACCAGGCCCATGGAAACAAAATCTGAAATGGTATCGACCCATGGTAAGTAATTAAGTAGTACTAGCTAGCT----TCCA
TCTCTTTAATTATCATGCTTGATTAATTATTATCTGATCAAATTCCATTCTCGTAAAGGCCCTGAAGTAGGCGTCGGGGA
ATAATCTATGTGCATACTATGTTTGCGAGAACATTCGCATGATGGCGTCCGAAAGGAGCAGATCTCAAAGACAGGAGTGG
GTACGTTTATCTGAACACTATTCACAATTTTTACACCATTATCGA--TATCTAGTCACACAACTAATACACATGCATATT
GATCTCCTTCTT---AACAGTTCAAAGAGGTGCGGGAGAAGCTCCTACCAGAGGACCGCATAGAAGCAATTCAAGAGGAA
ATAGCGGGATTTTTGCTCGACCAGGTCATAGATCCCAAAGGAGAATACTTTTACCCGCTACCGCCCCCATGAACCACTTC
CAATTGTTATCGTGCTCCGAAGGCACCAATTAGGAGAAATTGTATATAGCTAGCTAATTG--------------------
--TAT----------ATATATACATGTGTGTATATAT-------------------------------------------
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>chr3A_1
CCTGATAACAATTATTTAATAACCCATTTATTCA-TTTCTTTGTCGGCGGGCAGGGCTTGGGCAAAGTTCATCAACGTCA
CTCCAGGCCAATGGAAACAAAATCTGAAATGGTATCGACCCATGGTAAGTAATTAAGTAGTACTAGCTAGCT----TCCA
TCTCTTTAATTATCATGCATGATTAATTATTATCTGATCAAATTCCATTCTCGTAAAGGCCCCGAAGCAGGCATCGGGGA
ATAATCTGTGTGCATACTATGTTTGCGAGAACATTCGCATGATGGCATCCGAAAGGAGCAGATCTCAAAGATAGGAGTGG
GTACGTTTGTCAGAACACTATTCACAATTTTTACACCATTATCGA--TATCTAGTCACACAACTAATACACATGCATATT
GATCTCCT---T---AACAGTTCAAAGAGGTGCGGGAGAAGCTCCTACCAGAGGACCGCATAGAAGCAATTCAAGAGGAA
ATAGCGGGATTTTTTCTCGACCAGGTCATAGATCCCAAAGGAGAATACTTTTACCTGCTACCG-CCCCATGAACCACTTC
CAATTGTTATCATGCTCCGAAGGCACCAATTAGAAGAAATTGTATATAGCTAGCTAATTG--------------------
--TATA----TATATATATATACATGTGTGTATATAT-------------------------------------------
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>chr3A_1
CCTGATATGAACTATATAATAACCCCTTTATTCATTTTCTTTGTCGGCGGGCAGGGCTTGGGCAAAGTTCATCAGCGTCA
CTCCAGGCCAATGGAAAAAAAAGCTGAAATGGTATCGACCCAAGGTAAGTAATTAAGTAGTACTAGCTAGCTAGCTGCCA
TCTCTTTAATTATCATGCTTGATTAATTATTATCTGATCAAATTCCATTCTCGTAAAGGTCCTGAAGCAGGCGCCGGGGA
ATAATCTGTGTGCATACTATGTTTGCGAGAACATTCGCATGATGGCGTCCGAAAGGAGCAGATCTCAAAGACAGGAGTGG
GTACGTTTGTCAGAACACTATTCACAATTTTTACACCATTATCGA--TATCTAGTCACACAACTAATACACATGCATATT
TATCTCCT---TCTTAACAGTTCAAAGAGGTGCGGGAGCAGCTCCTACCAGAGGACCGCATAGAAGCAATTCAAGAGGAA
ATAGCGGGATTTTTGCTCGACCAGGTCATAGATCCCAAAGGAGAATACTATTACCCGCTACCGCCCCCATGAACCACTTC
CAATTGTCATCGTGCTCCGAAGGCACCAATTAGGAGAAATTGTATATAGCTACCTAATTG--------------------
--TGTA--------CATATATACATGTGTGTATATAT-------------------------------------------
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>chr4A_1
CCTGATAACAACTATTTAATAACCCAGTTATTCATTTTCTTTGTCTGCGGGCAGGGCTTGGGCAAAGTTCATCAGCGTCA
CTCCAGGAGAATGGAAACAAAATCTGAAATGGTATCGACCCATGGTAAGTAATTAAGTAGTACTAGCTAC----CTGCCA
TCTCTTTAATTATCATGCTTGATTAATTATTATTTGATCAAATTCCATTCTCGTAAAGGCCCTGAAGCAGGCGCCGGGGA
ATAATATGTGTGCATACTATGTTTGCGACAACATTCGCATGATGGCATCCGAAAGGAGCAGATCTCAAAGACAAGAGTGG
GTACGTTTGTCAGAACACTATTCACATTTTTTACACCATTATCAA--TATCTAGTCACACAACTAATACACATGCATATT
GATCTCCT---TCTTAATAGTTCAAAGAGGTGCGGGAGAAGCTCCTACCAGAGGACCGCATAGAAGCAATTCAAGAGGAA
ATAGCGGGATTTTTCCTCGACCAGGTCATAGATCCCAAAGGAGAATACTTTTACCCGCTACCGCCCCCATGAACCACTTC
CAATTGTTATCGTGCTCCGAAGGCACCAATTAGGAGAAATTGTATATAGCTAGCTAATTG--------------------
--TATA--------TATATATACATGTGTGTATAT---------------------------------------------
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>chr2A_2
-CTGATATGAACTATGTAATAACCCCTTTATTCATTTTCTTTGTCGACGGGGAGGGCTTGGGCAAAGTTCATCAGCGTCA
CTACAGGCCAATGGAAACGGAAGCTGAAATGGTATCGACCCAAGGTAAGTAATTAAGTAGTACTAGTTAGCTAGCTGCCT
TCTCTTTAATTATCATGCTTGATTAATTATTATATTAACAAATTCCATTCTCGTAAAGGCCCTGAAGCAGGCGCCGGGGA
ATAATCTGTGTGCATACTACGTTTGCGAGAACATTCGCATGATGGCGCCCGAAAGAAGCATATCTCAAAGACAGGAGTGG
GTACGTTTGTCAGAACACTATTCACAATTTTTACACCATTATCGA--TATCTAGTCACACAACTAATACACATGCATATT
GATCTCCT---TCTTAACAGTTCAGAGAGGTGCGGGAGCAGCTCCTAGCAGAGGAGCGCATAGAAGCAATTCAAGAGGAA
ATAGCGGGATTTTTGCTCGACCAGGTCATACATCCCAAAGGAGAATACTATTACCCGCTACCGCCCCCATGAACCACTTC
CAATTGTCATCGTGCTCCGAAGGCACCAATTAGCAGCAATTGTATATATATATATATATATATATATATATATATATATA
TATATA----TATATATATATATATATATATATATATGACA---------------------------------------
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>chr6A_3
--TGATAAAAAATATTTAATAACCCATTTATTCATTTTCTTTGTCGGCGGGCAGGGCTTGGGCAAAGTTCATCAACGTCA
CTCCAGGCCAATGGAAACAAAATCTAAAATGGTATCAACCCATGGTAAGTAATTAAGTAGTACTAG----CTAGCTGCCA
TCTCTTTAATTATCATCCTTGATTAATTATTATCTGATCAAATTCCATTCTCATAAAGGCCCTGAAGCAGCCGCCGGGGA
ATAATTTGTGTGCATACTACGTTTGCGAGAACATTCGCATGATGGCGTCCAAAAGGAGCAGATCTCAAAGACAGGAGTGG
GTACGTTTGTCAGAACACTATTCACAATTTTTACACCATTATCGA--TATCTAGTCACACAACTAATACACATGCATATT
GATCTCCT---TCTTAACAGTTCAAAGAGGTGCGGGAGAAGCTCCTACCAGAGGACCGCATAAAAGCAATTCAAGAGGAA
ATAGCGGGATTTTTGCTCGACTAGGTCATAGATCCCAAAGGAGAATCCTTTTACCCGCTACCGCCCCCATGAACCACTTC
CAATTGTTATCGTGCTCCGAAGGCACCAATTAGGAGAAATTGTATATAGCTAGCTAATTG--------------------
--TATATATATATATATATATACATGTGTGTATATAT-------------------------------------------
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>SNPs
--------------------------S--------------------------S--------------------------
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--------------------S------------------------------------SS---------------------
-------------------------S------------------------------------------------------
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---------------------------------S----------------------------------------------
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-------------------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
S
>forward_843
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-----------------------ATGGGGCTTGCGATATACCG-------------------------------------
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>reverse_1767
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------TCGTACGTCCAAATGCAGCA------------------------------------------------------
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