>input_sequence_86978
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------------------------------------------------------------ATGCCGGTGGCTGCTCAGTG
GGCGGCTGAGGGTAGTATGCCTGTGGCTGCTGCTCGGTGGGCGGCTGAGGATGATATGCTTGTGGCTGCTCAGCGGGCGG
CGGCGGTGACTCCTTCCCCTTCCCCTTTGATTTTGATTTCTTTTTGCGACTGTTGCTCGGCGGTGGCCCGGCCATCTCTT
CCGGCTTGCCGTCGCCCATGA-----------------------------------------------------------
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>chr2A_1_TraesCS2A01G517700
AAATCTGAGCATCGTATTGTTGTATTGCATTTAACCGTATGAATTTCTCACACACCATTTATTTGCCAAAGTGCTAAAAA
TTGTTTCAAACCACTATGTTGAAAAGGAGACACTATCGAACAAGAATCTGCCAAAGTGCTAGGTTGTTTGACGGCACCAT
GTAGAAAAGTAGACATTATTGAACAAGAATAACGAGTTTATTTAATAAAAAGGGAAGGCATCGATTCTCTCTCGTCTTTT
CAGAAATGATCTGATGTGAATGGGAGAGCATCG---GTTGGCGACGATTCATGCAAAGCCCCCCC-------TACAAAAA
TGATTCATGCATAGCAGATGCATACACGAATCATTG-----GTAATCAAGACACGCAAAACACATGCAAATTTGCCTAA-
----GCAGCACAATGGTTGTGGCACACGAAACAGTGAACAGATCACATTATGATGCAAGCACCCGCTTGATCCTCCTCGC
AGATAACCCGGTAGCCGCTGTATCCGCCGCAGTACGGCGCGCGTGCGCCACCGTAGCAGCCGGCTGGCGGCGGCAGCGCC
ACGGCGGCGGTGTAGCCGTACGTCCTGCCGCAGTCTGAGCACCTGCAACTTCCGTAGTACCCCTGGTAGCATGACGCGCA
GCACGTGCAGCGGCACGAGCCCACAGGTCGCGCCGGCAGCGAGGGGATCTCCACCATCGGCGGCCCGTTCCACGACGGCA
TCTCTCCCATCGGGTGCCTCCTCTCCCTCGGGTTCTTGTGGCACTCTGGCCCTGCTTCTGGCACGAAGTGGACCTGCATC
TCCTTTGGCGTCTCAAGCTCGGCCGGTCTCTCTTTCGGCCTCTCCTCCTCCCTGACCGCCTGCATGGTCGCTGACATCTC
TCTGTCCGGAGGGGGCTGCTGAGGGTGGTGGTATTCCTGTGGCTGCTCAGCGGGCGGCTGAGGGTGGTATGCCGGTTGCT
GCTCGGTGTGCTGCTGAGGGTGGTATTCCTGTGGCTGCTCAGTGGGCGGCTGCTGGTGGTATGCCGGTGGCTGCTCAGTG
GGCGGCTGAGGGTAGTATGCCTGTGGCTGCTGCTCGGTGGGCGGCTGAGGATGATATGCTTGTGGCTGCTCAGCGGGCGG
CGGCGGTGACTCCTTCCCCTTCCCCTTTGATTTTGATTTCTTTTTGCGACTGTTGCTCGGCGGTGGCCCGGCCATCTCTT
CCGGCTTGCCGTCGCCCATGATTTGGACGCCCTTGATCACCTTGCCTCCTTTGCATCTGATCCTGCATGATAGCTTGTGT
GGATCGAACGGCCCGTCGATGATGACTGCGTTATTGTTGGTGTCGAAGGAGATCGTCCTAATCCTCTCTTGATCTGCACA
AGTCATTATCTTGTAAGATATACAGTAGCAAGTAAGAAATTTGTGTTCCTGATTGGTATGGCAAGCTCATGTGGAGAGTT
TCTTTGTGACTGAGATGCATGAACGAACATATAGCATTAG-TGCAGTACAGTCAGATGTTCTACGCACCTTGAAGGCTGC
AAAGAATCTTGCGGATCTTTTTGTAGCACTGGTGGCAATCAAGGTCCACCCTTAAGATTATAGTGGAGATCTGTGTTGAC
AGAAGCATCAGTGAAGTAAATAGTTACTA---------------------------------------------------
------------------------------------------------------ATGAAGCCCCAAAATCAGTGCATACT
TTCTAATTTCAGAGACGCTGAGCTTTTGTTCTTGGTTATCTTATGAATGAATGCTCACAATAGTTCTTTGGGACACAAAA
ACTGCAATTCCTTCACTACTTGATCAATAATAAGGGCATCTTTGGAACTCAGGTTTCTAAAAACTTATGAATAGGCAAAA
AAGTATGGTTGAGATGTTATGACCT-CTTTGGTCCATGGGAAACTATAATATGGGAATTTACTTGACTCATTTGATGCTA
ATAATTTCTGTAGGCGAATATGAAGTGACAGAAGATGTGTGGGAGGCACAAATACAAATTTCCATGAGGTCTAACCACTA
TTTTTCACTAGGTGGGGTTTAATCTCTTCTTAAAAATCCTATGAAATTGTGGTATAAGAAAACAATCCATATAAATTGAT
GGTCTCGCTTCTTTTATCCGAGTGACCCTAAATTTTTTTTTCCTACGAGCAGAAATCATGCAAAAATCTTATGAAAATCT
CTTTGGTTTTTGTTACCAAGTGAATGACTAAGTCAGAAAATGGGAAGCAACATACACA--TGTGGACACATGGGTTTTGA
ATTACGAGAA
>chr2B_1
AAATCTGAGTGTCGTATTGATGTATTGCATTTAATCGTACGAATTTCTCACACACCATTTATTTGCCAAAGTGCTAAAAA
TTGTTTCACACCACTATGTTGAAAAGGAGACACTATCGAACAAGAATCTGCCAAAGTGCTAGGTTGTTTGACGGCACCAT
GTAGAAAAGTAGACATTATTCAACAAGAATAACGAGTTTATTTAATAAAAAGGGAAGGCATCGATTCTCTCT--TCTTTT
CAGAAATGATCTGATGTGAATGGGAGAGCATCAATAGTTGGCGATG----------------------------------
---------------------ATACACGAATCATTT-----GTAATCAAGACATGCAAAAAGATGCAACTTGCCTATGAT
CAACGCAGCACAATGGTTGTAGCGCACGAAACAGTGAACATATCACATTATGGTGCAAGCACCCGCTTGATCCTCCTCGC
AGATAACCCGGTAGCCGCTGTATCCGCCGCAGTACGGCGTGCGTGCGCCACCGTAGAAACCGGCTGGCGGCGGCAGCGCC
ACCGCGGCGGTGTAGCCGTACGTCCTGCCGCAGTCTGAGCACCTGCAACTTCCGTAGTACCCCTGGTAGCATGACGCGCA
GCACGTGCAGCGGCACGGGCCCACAGGTCGCGCCGGCAGCGAGGGGATCTCCACCATCGGCGGCCCGTTCCACGAAGGCA
TCTCTCCCATCGGGTACCTCCTCTCCCTAGGGTTCTTGTGGCACTCCGCCCCTGATTCTGGCACGAAATGGACCTGCATC
TCCTTTGGCTTCTCAAGCTCGGCCGGCCTCTCTTGCGGCCTCTCCTCTTCCCTGATTGCCGGCATGGTCGCTGATACCTC
TCTGTCCGGAGGGGGCTGCTGA---TGGTGGTATTCCGGTGGCTGCTCAGCGGGCGGCTGAGGGTGGTAGGCCGGTTGCT
GCTCGGTGGGCTGCTGAGGGTGGTATTCCGGTGGCTGCTCAGTGGGCGGCTGCTGGTGGTATGCCGGTGGCTGCTCGGTG
GGCGGTTGAGGGTAGTATGCCTGTGGCTGC---TCGGTGGGTGGCTGAGGATGATATGCTTGTGGCTGCTCAGCCGGCGG
GGGCGGTGACTCCTTCCCCTTCCCCTTTGATTTTGATTTCTTTTTGCGACTGTTGCTCGGCGGTGGCCCGGCCATCTCTT
CCGGCTTGCCGTCGCCCATGATTTGGATGCCCTTGATCACCTTGCCTCCTTTGCATCTGATCCTGCATGATAGCTTGTGT
GGATCGAACGGCCCGTCGATGATGACTGCGTTATTGTTGGTGTCAAAGGAGATCGTCCTAATCCTCTCTTGATCTGCACA
AGTCATTATCTTGTAAGATATACAGTAGCAAGTAAGAAATTTGTGTTCCTGATTGGTATGGCAAGCTCATGTGGAGAGTT
TCTTTGTGACTGAGAAGCATGAACGAACAGATAACATTAG-TGCAGTACAGTCAGATGTTCTACGCACCTTGAAGGCTGC
AAAGAATCTTGCGGACCTTTTTGTAGCACTGGTGGCAATCAAGGTCGACCCTTAAGATTATAGTGGAGATCTGTGTTGAC
AGAAGCATCAGTTAAGTAAATAGTTACTA---------------------------------------------------
------------------------------------------------------ATGAAGCCTGAAAATAAGTGCATACT
TTCCAATTTCAGAGACGCTGAGCTTTTGTTCTTGGTTATCTTATGAATGAATGCTCACAATAGTTCTTTGGGACACAAAA
ACTGCAATTCCTCGACTACTTGAACAATAACAAGGGCATCTTTGGAACTCAGGTTTCTAAAAGCTTATGATTAGGCAAAA
ATGTATGGTTAAGATGTTATGACCT-CTTTGGTCCATGGGAAACAAAAATATGAGAATTTACTTGACTCATTTGATGCTA
GTAATTTCTGTAGGCGAATATGAAGTG--AGAAGATGTCTGGAAGGCACAAATACACATTTCCATGTGGTCTAACCACTA
TTTTTCACTAGGTGGTGTTTAACCCGTTCTTAGAAATCCTATGAAATTGTGGTGTAAGAAAACAATCCATAGAAATTGAT
TGCCTTGCTTCTTTTATCCAACTGACCCTAAAAACAAATTTCCAACGAGCAGAAATCATGCAAAAATCTTATGATAATCT
CTGAGGTTTTTGTTACCAAGTGAATGACTAAGTCAGAAAATGGGAAGCAACATG--CA--TATGGACACATGGGTTTCGA
ATTACAAGAA
>chr2D_1
AAATCTCAGTGTCGTATTGCTGTATTGCATTTAATCGTACAAATTTCTCACACACCATTTATTTGCCAAAGTGCTAACAA
TTGTTTCACACCACTATGTTGAAAAGGAGACACTATCGAACAAGAATCTGCCAAAGTGCTAGGTTGTTTGACGGCACCAT
GTAGAAAAGTAGACATTATTGAACAAGAATAACGAGTTTATTTAATAAAAAGGGAAGGCATCGATTCTCTCG--TCTTTT
CAGCCATGATCTGATGTGAATGGGAGAGCATCAATAGTTGGCGATGATTCATGCAAAGCCCCTCCCCCCCCCTACAAAAA
TGATTCTTGCATAGCAGCTGCATACACGAATCATTGGTACAGTAATCAAGACACGCAAAACACATGCAACTTTGCCTAA-
----GCAGCACAATGGTTGTGGCACACGAAACAGTGAACAGATCACATTATGGTGCAAGCACCCGCTTGATCCTCCTCGC
AGATAACCCGGTAGCCGCTGTATCCGCCGCAGTACGGCGTGCGTGCGCCACCGTAGCAACCTGCTGGCGGCGGCAGCGCC
ACGGCGGCGGTGTAGCCGTACGTCCTGCCGCAGTCTGAGCACCTGCAACTTCCGTAGTACCCCTGGTAGCATGACGCGCA
GCACGTGCAGCGGCACGGGCCCACAGGTCGCGCCGGCAGCGAGGGGATCTCCACCATCGGCGGCCCGTTCCACGAAGGCA
TCTCTCCCATCGGGTGCCTCCTCTCCCTAGGGTTCTTGTGGCACTCCGGCCCTGCTTCTGGCACGAAATGGACCTGCATC
TCCTTTGGCTTCTCAAGCTCGGCCGGTCTCTCTTGCGGCCTCTCCTCCTCCCTGACCGCCTGCATGGTCGCTGACATCTC
TCTGTCCGGAGGGGGCTGCTGAGGGTGGTGGTATTCCGGTGGCTGCTCAGCGGGCGGCTGAGGGTGGTACGCAGGTTGCT
GCTCGGTGGGCTGCTGAGGGTGGTATTCCGGTGGCTGCTCAGTGGGTGGCTGATGGTGGTATGCCGGTGGTTGCTCAGTG
GGCGGCTGAGGGTAGTATGTCTGTGGCTGC---TCGCTGGGCGGCTGAGGATGATATTCTTGTGGCTGCTCAGCGGGCGG
CGGCGGTGACCCCTTCCCCTTCCCCTTTGATTTTGATTTCTTTTTGCGACTGTTGCTCGGCGGTGGCCCGGCCATCTCTT
CCGGCTTGCCGTCGCCCATGATTTGGACGCCCTTGATCACCTTGCCTCCTTTGCATCTGATCCTGCATGATAGCTTGTGT
GGATCAAACGGCCCGTCGATGATGACTGCGTTATTGTTGGTGTCGAAGGAGATCGTCCTAATCCTCTCTTGATCTGTACA
AGTCATTTTCTTGGAAGTTATAC--TAGCAAGTAAGAAATTTGTGTTCGTGATTGGTTTAGCAAGCTCATGTGAAGAGTT
TCTTTGTGACTGAGATGCATGAATGAACATATAGTAGTAAATGCAGTACATTCATATGTTCTACGCACCTTGAAGGCTGC
AAAGAATCTTGCGGATCTTTTTGTAGCACTGGTGGCAATCAAGGTCGACCCTTAAGATTATAGTGGAGATCTGTGTTGAC
AGAAGCA-CAGTAAAGTAAATAGTTACTACCTCTGTTCGTTTTTATAAGACGTTTTAGACGTTAAGACACCGTTCAAAAC
AGTACAAAACAAGCTGTCTGAAACGTCTTATAAAAACAAACGGACGGAGTACTAATGAAGCCTCAAAATCAGTGCATACT
TTCCAATTTCAGAGATGCTGAGCTTTTGTTCTTGGTTATCTTATGAATGAATGCTCATAATAGTTCTTTGGGACACAAAA
ACTGCAATTCCTTCACTACATGATCAATAATAAGGGCATCTTTGGAACTCAGGTTTCTAAAAACATATGAATAGT-AAAA
ATGTATGGTTGAGATGTCATGACCAACTTTGGTCCATGGGAAACCAAAATATGGGAATTACTTTGACTCATTTGATGCTA
GTAATTCCATAG---GAATATGAAGTGACAGAAGATGCCTGGGAGGCACAAATACAAATTTCCATGAGGTCTAACTACTA
TTTTTCACTAGGTGTGGTTTATCCTCTTCTTAGAAATCCTGTGAAATTGTGGTGTAAGAAAGCAATCCATAGAAATTGAT
GGTCTGGTTTCTTTTACCCAAATCACCCTAAAAACAAATTTCTGACCAACAGAAATCATGCAAAAATCTTATGAAATTCT
CTTTGGTTTTTGTTACCAAGTGAATGACTAAGTCACAAAATGGGAAGCAACATG--CACATGTGGACACATGGGTTTTGA
ATTACGAGAA
>SNPs
---------SS--------S--------------S----S----------------------------------------
--------S-----------------------------------------------------------------------
------------------------------------------------------------------------SS------
--------------------------------S-----------S-----------------S-----------------
------S----------S---------------------------------------------------S----------
----------------------------------------------------S---------------------------
---------------------------------------S------------------S---------------------
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-----------------S---------------------------------------------------------S----
----------------------------S-----------------S--------------------S------------
---------S------------------------S---------------------------------------------
-------------------------------------S-------------------------------S----------
--------S--------------------S--------------------------------------------------
------------------------------SSS-----------------------------------------------
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----------------------------------------------S---------------------------------
------------S-------------------------------------------------------------------
--------------------------------------------------------------S-----------------
---S----------------------------------------------------------------------------
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-S------------------------------------------S-S---------------------------------
S-------------------------------------S-----------------------------------------
----------------------S---------S--------------------S-----------------S--------
-----S-------------S-S----------SSSSSS-----S------------------------------------
-----------------------------------------------------SSS------------------------
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>forward_767
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----------------------------CGGGTTCTTGTGGCACTCT---------------------------------
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>reverse_2166
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-----CGCTTCTTTTATCCGAGTGACC-----------------------------------------------------
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