>input_sequence_86964
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------------ATGTCCATCATGAACTCCTTCATCAACGA
CATCTTCGAGAAGCTCGCCGGCGAGTCCGCCAAGCTCGCGAGGTACAACAAGAAGCCCACCATCACCTCCCGGGAGATCC
AGACCTCCGTCCGCCTCGTCCTCCCCGGCGAGCTCGCCAAGCACGCCGTCTCCGAGGGCACCAAGGCCGTCACCAAGTTC
ACCTCCTCCTAG--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------
>chr1B_1_TraesCS1B01G387100
ACCAAAGGTTCGAGAATTGTTGTACACCTTGCGGACCGGCACCCACGTAGAAGAACACTATTCAATTTGCATCCGCTCCA
TTTTCAATAGCGCTATTCATGGGCAGCTCGTCCCGACGAGCCTGACCCGAAAGCCCGGCATCCAGTCCATGCATGGGCTC
GACATTTTTGTCCAAAGTCCGAATAAAAACCGAATGAGTTTTAAATAATTGTTTTAATCTAAAAACAGGTATAGTTCTAT
ATTTAAATAACCTAAATTTAATTACTTTAATTAAGAACTGTATTTTTTTTAGAACTATTAAGAACTTCTTTTTTAGAAGA
AGAAGAGAAGAACTATTAAAAACTGTACTGTTCAAATGTTTCTGGCCGGGCCGGATCCGGGTTCGGTATTCTTGCTTCGG
GCTTTGTCAAGCAAAGGCCCGTTCA-AGGGCATGATGCCTTTGCAACAGTTTGGGAGTGTGTCCACGTCAGCGATCCGCG
GTGTCCATGTTTAGTTTTCACCCCTGGTTCCCTTCAAACGATGCTTTGCGTTGCAGCAGTTCGAGAGTGGGCCATACCGT
CGCTCCACGTCAGCGATCCGAGGCACTGACCCGTCCACCAATCAGCGCGCAGCTCT-CTCCCCTATAAAATCCAGCACCC
AT-CTCCTCCTTTCCCCACA--ATCTCAGTCCCCATCTTC----CCTGCCTCCAGCAAACT--CACACATCTCACCACCG
GAGCTCCCAATCCCACCCGAAGCGGCAGCCATGGCCCCCAAGGCAGACAAGAAGACCGTCGCCGAGAACAAGGTGGAGAA
GGCGGCGGAGAAAACCCCCGCCGGCAAGAAGCCCAAGGCCGAGAAGCGGCTGCCGGCGGGCAAGACGGCGTCCAAGGAGG
CCGGCGGCGAGGCCAAGACGAGGGGCCGGAAGAAGGGCAGCAAGGCCAAGAAGAGCGTCGAGACGTACAAGATCTACATC
TTCAAGGTGCTGAAGCAGGTCCACCCCGACATCGGCATCTCCTCCAAGGCCATGTCCATCATGAACTCCTTCATCAACGA
CATCTTCGAGAAGCTCGCCGGCGAGTCCGCCAAGCTCGCGAGGTACAACAAGAAGCCCACCATCACCTCCCGGGAGATCC
AGACCTCCGTCCGCCTCGTCCTCCCCGGCGAGCTCGCCAAGCACGCCGTCTCCGAGGGCACCAAGGCCGTCACCAAGTTC
ACCTCCTCCTAGACTGACGGCGTGTAGTTGGTT-----------------------------------------------
-TCTGTATCTGT-----------------ACTCTGCTTATCTATCTATCTGCAAGTAGCGGTAGCAGTA-----------
-CCTGTGCTGGG---TGATTGCCAACGCTTTGTTGGCTCGTTGGTTGTA-GTAAGAACTCAAGTTGCTGCTTTGGCAAAC
TGA---AATCTATCTA-GAACTCAAGTTGTGTTCCTATATCTGTACTAGTGATCTTGCCTGACTGATGTTAGCTTTTGAC
CCTTCTGAAATGTCTGGCCATTTGTATT--CTGGTTGCTGAACTCTGGTTATCTGCAAACAGTGGTAATAAAAACCGAGA
TTCGTTTATGGAATTTGGAATTTGGTAGT---AAGATCTGAATTCACTGGTGCAAACCGAGACTGAGAAATAGTGATACA
TTTATGCAGTAGGGATTTGATTTCTTGC-TAGGTTCTTGAGCTAGTCCCTGCCATGTCTGTGCTTTCATAATTATCGTAG
CA------ATGTAATTTGTGTTTCCAGATTCCTGATGCCC---CAGTAGGTTCTGTTTCTGCATTAGGCGCAGAACCCAG
TCTTGTTCAATCAGTCGGGCTTAATTTCCTGCTGCTATTGAGGATCATGGTCATTTAACGTGGCAGGATAAGAACAACCC
AACGGTTTGCCTTACCCTGTCCTGTTCTCAAGGTACAGTAGTTTACTTTGCAGTATGTATATCAGTTGGCAGCAGCAGTT
TGGTATTATCCTCTGAATCCTGAAAATGGCAAATGTGAGCTGCTCTGTGAAC----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------AACCT
TGTGCAGTTTGCAACCAGAGTGTTCTTGGATTCAAATCTGGTTCCAAGCTGCTGCGGCGCAAAGGACGTTCGGATGAAT-
TGCACATGACAAATCCGATCCAGAATATTTTGCATTACCAAATCCACCCGTCTTTACTACATTCTTGGATTGCACTTATT
TTCCTTGCATTAAACCTTCAGCTAAACACTTCATGGCCAATACAGGGCATGTGGATAAATGTACGCACAAACACGAGTGA
TGCAGTCGGAACTCGA
>chr1B_1
ACCAAAAGTTCGAGAATTGTTGTAGACCTTGCGGACCGGCACTCATGTAGAAGAACACTATTCAATTGGCACCCGATCCG
TTTTCAGTAGGCCTATTCATGAGCAACCCGACCCGACGAGCCTGACCTGAAAGCCCGACATCCGGTCTAGGCATGGGCTC
GACGTTTTCGTCCGAAGCCCGAGCAAAGGCCGAATGAGTTTTAAATAATTGTTTTAATTTAAAAATTGCTATAGTACTAT
ATTTAAATAAACTGAAAGTAATAACTTTAAATAAGAAGTGCACTTTTTT-------------------------------
-------------------------TACTGTTCAAATGTTTCTGGCCGGGCCGAATCGGGGTTTGGGATTCTTGCTTCGG
GCTTTGTCAAGCCC-GGCCCGTCC-GAGGGCATGAT--------------------------------------------
-----------------------CTGGTTCTAGGAAG---AATGCTTGATTT---GCAGTTAGGGAGTGTG---------
---TCCACGTCAGTGATCCGAGGCACTGACCCCTCCACCAATCAGCGCCCACCTCTCCTCCCC-ATAAAACCCAGCCCTG
ACCCCGCTCCATTCCCCACACCATCTCAGTCCCCACTTCC----TGCT--TCCAACAAACT--CACACAACCCACCACCG
AAGATCCCAACTCCACCCGAAGCGGCAGCCATGGCCCCCAAGGCAGACAAGAAGCCCGCGGCCGAGAACAAGGTCGAGAA
GGCGGCGGAGAAGACCCCCGCGGGCAAGAAGCCCAAGGCCGAGAAGCGGCTGCCGGCGGGCAAGACGGCGTCCAAGGAGG
CCGGCGGCGAGGCGAAGACCCGGGGCAGGAAGAAGGGCAGCAAGGCCAAGAAGGGCGTGGAGACGTACAAGATCTACATC
TTCAAGGTGCTGAAGCAGGTGCACCCCGACATCGGCATCTCCTCCAAGGCCATGTCCATCATGAACTCCTTCATCAACGA
CATCTTCGAGAAGCTCGCCGGGGAGTCGGCCAAGCTCGCGAGGTACAACAAGAAGCCCACCATCACCTCCCGGGAGATCC
AGACCTCCGTCCGCCTCGTCCTCCCCGGGGAGCTCGCCAAGCACGCCGTCTCCGAGGGCACCAAGGTCGTCACCAAGTTC
ACATCCTCCTAGACTGACGGCGTGTTGTTGGTT-----------------------------------------------
-TCTGCATCTGTAG----------TGTCGACTCTGCTTATCTATCTATCTGCAAGTAGTGGTAGCAGTAGTAGT------
ACCTGTGCTGGG---TGATTGCCAACGCTTTGTTGGCTCGTTGGTTGATTGTAAGAACTGAAGTTGCTGCTCTGGCAAAC
TGA---AATCTATCTAAGAACTGAAGTTATCCTTCAGAAATGTCTGC---------------CTGATGTTGGCTTTTTAC
CCTTCTGAAATGTCTGGCCATTTGTATT--TTGGTTGCTGAACTCTGGTTATCTGCAAACAGAGCTACTACTGAATTTG-
--------------TTGGAATTTGGTAGTAGTAAGAACTGAATTCAGTGGTGCAAACCGAGATAGAGAAATAATGATACA
TTTATGCAGTAGGGATTTGATTTTTTGC-TAGGTTCTTGAGCTAGTCCCTGCCATGTCTGTGCTTTCATAT----CGTAG
CAATGTATATGTAATTTGTGTTTCCAGATTCCTGATCCTCCATCAGTAGGTTCTGTTTCTGCATTAGGCGCAGAACCCAG
TGTTGTTCAATCGGTCGGGCTTAATTTCCTGCTGCTATTGAGGGTGATAATCATTTAAAGTGGCAAGGTAAGAACAACCC
AACGATTTGCCTTGCCATGTCCTGTTGTTAAGGTACATTAGTTTACTCTGCAGTTTGTACATCAGCTGGCAGTAGCAGTT
TGGTGTTATCCTCTGAATTCTGAAAATGGCAAATGTGAG-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------
>chr1B_1
ACCAAATGTTCGAGAATTGTTGTAGACCTTGCAGACCGGCATCCTCGTTGAAGAACACTATTCAATTTGCATCTGCTCCG
TTTTCAACAGCCCTATTCATGAGCAGCCTGTCCAGACAAGCCCGACCCGAAAGCCCGGCATCCGATCCAGCCATGGGCTC
AACTTTGTCGTCCGAAGCCCAAACAAAGGCCGAATGAGTTTTAAATAATTGTTTTAATTTAAAAATAGGTACAGTACTAT
ATTTCAATAACCTGGAAGTAATTACTTTAAATAAGAAG------------------------------------------
-----------------------GGTACTGTTCAAATGTTTCTGGCCGGGCCGGATCTGGGTTTGATATTCTTGCTTCGG
GCTTTGTCAAGCCC-GGCCCGTCCA-AGGGCATGAT--------------------------------------------
-----------------------CTGGTTCCAGGAAGCCCAATGCTTGCTTT---CCAGTTCGGGGCTGTG---------
---TCCACGTCAGTGATCCGAGGCACTTACCCCTCCACCAATCAGCGCTCACCTCTCCTCCCCTATAAAATCGAACACCC
ACCCCGCTCCATTCCCCACACCATCTCAGTCCCCACCTTT----CCCT--TCCAGCAAACTCACGCAACCCCAC---CCG
AAGCTCCCAACCCCACCCGAAGCGGCCGCCATGGCCCCCAAGGCAGACAAGAAGCCGGCCGCCGAGAACAAGGTGGAGAA
GGCGGCGGAGAAGACCCCGGCGGGCAAGAAGCCCAAGGCAGAGAAGCGGCTGCCGGCGGGCAAGACGGCGTCCAAGGAGG
CCGGCGGCGAGGCGAAGACGAGGGGCCGGAAGAAGGGCAGCAAGGCCAAGAAGGGCGTGGAGACTTACAAGATCTACATC
TTCAAGGTGCTGAAGCAGGTCCACCCCGACATCGGCATCTCCTCCAAGGCCATGTCCATCATGAACTCCTTCATCAACGA
CATCTTCGAGAAGCTCGCCGGCGAGTCCGCCAAGCTCGCCCGTTACAACAAGAAGCCCACCATCACCTCCCGGGAGATCC
AGACCTCCGTCCGCCTCGTCCTCCCCGGCGAGCTCGCCAAGCACGCCGTCTCCGAGGGCACCAAGGCCGTGACCAAGTTC
ACATCCTCCTAGACTGACCCTGCGTCGCTTGC-------------------------TGTCACCTGCTTGTGGTCGCTGA
CTCTGCT----------------------------------TATGTATCTGCAAGTAGTGGTAGGAGTGGTCGT------
CTGTG--------------TGCCAACGCTTTGTTGGCTAGTTGGTTGTG----GGAACTGAAGTTGCTG-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------
>chr1D_1
ACCAAAGGTTCGAGAATTGTTGTAGACCTTGCGGACTCGCACCCACGTGGAAGAACACTATTCAATTGGCATCCTATCCG
TTTTCCGTAAGCCTATTCATGAGCAGCCCGCCCTGACAAGCCTGACCCGAAATCCTGGCATCTGGTCTAGGCATGGGCTC
GACCTTTTCGTCCGAAGCCTGAACAGAGGCCGAATGAGTTTTAAATAATTGTTTTAATTTAAAAACCGGTATAGTACTAT
ATTTAAATAAACTGAAAGTAATTACTGTAAATAAGAAG------------------------------------------
-----------------------TGTACTGTTCAAATGTTTCAGGCCGGGCCGAATACGGGTTTGGGATTCTTGATTCGG
GCTTTGTCAAGCCC-GGCCCGTCCAGAGGGCATGCT--------------------------------------------
-----------------------CTGGTTCCAGCAAG---AATGCTCGCTTT---GCAGTTGGGGAGTGTG---------
---TCCACGTCATCGATCCGGGGCACTCATCCCTCCACCAATCAGCGCCCACCTCTCCTCCCCTATAAAACCCAGCCCCC
ACCCCGCTCCTTTCCCCACACCAACTCAGTCCCTACCTTT----CCCT--TCGAGCAAACTCACACAACCCACACCACCG
CAGCCCCCAACCCCACCCGAAGCAGCAGCCATGGCCCCCAAGGCAGACAAGAAGCCGGCGGCCGAGAACAAGGTCGAGAA
GGCGGCGGAGAAGACCCCCGCGGGGAAGAAGCCCAAGGCCGAGAAGCGGCTGCCGGCGGGCAAGACGGCGTCCAAGGAGG
CCGGCGGCGAGGCCAAGACCCGGGGCAGGAAGAAGGGCAGCAAGGCCAAGAAGGGCGTGGAGACGTACAAGATCTACATC
TTCAAGGTGCTGAAGCAGGTGCACCCCGACATCGGCATCTCCTCCAAGGCCATGTCCATCATGAACTCCTTCATCAACGA
CATCTTCGAGAAGCTCGCCGGCGAGTCGGCCAAGCTCGCGAGGTACAACAAGAAGCCCACCATCACCTCCAGGGAGATCC
AGACCTCCGTCCGCCTCGTCCTCCCCGGGGAGCTCGCCAAGCACGCCGTCTCCGAGGGCACCAAGGCCGTCACCAAGTTC
ACCTCCTCCTAGACTGACGGCGTGCAGTTGGTT-----------------------------------------------
-TCTGCATCTGCATCTGTA----CTGTTGACTCTGCTTATCTATCTATCCGCAAGTAGTGGTAGCAGTAGTAGC------
ACCTGTGCTGGG---TGATTGCCAACGCTTTGTTGGCCCGTTGGTTGTA----AGAACTGAAGTTGCTGCTTTGGCATAC
TGATGAAATCTATCTA-GAACTGAAGTTAT------------------------------------------CTTTTTAT
CCTTCTGAAATGTCTGGCCCTCTTGGTACCTTGGTTGCTGAACTCTGGTTATCTGCAAACAGTGCTACTACTGAATTTG-
--------------TTGGAATTTGGTAGTA---AGAACTGAATCCAGTGGTGCAAACTGAGATTGAGAAATAA-------
-TTATGCATTAGAGATTTGATTTTTTAC-TAGGTGCTTGAGCTAGTCCCTGCCATGTCCGTGCTTTCATAC----CGTAG
CA------GTGTAATTTGTGTTTCCAGATTCATGACCCTCCATCAGTAGGTTCTGTTTCTCCATTAGGCACAGAACCCA-
--------------------------------------------------------------------------------
-ACGGTTTGCCTTACCATGTCCTGTCCTTAAGGTACAGTAGTTTACTCTGCAGTTTGTATATCAGCTGGCAGCAGCAGTT
TTGTGTTACCCTCTGAATTCTGAAAATGGCAAATGTGAGTTGTTTTTGTGAAAAATTAAGCGTATGTTACTCTCGATTTC
TTGTAGTAACTAAACAAGATGAGGCTCTAGGCCGGCGCTTCTCAGTTTCATTGCCTATCTGACAACTGAAGAAACCATGC
ATGCCTTCTATGCACATTTGGTGTGCTGCTCCTTGTGGTGCTCTATAGTTAGATGCTGGCGTGCGTTCTGACCATGTTAT
CATATCGCAAGAATCGTGCTGGAATTGGAGTGTTGCAATCATAGTGTTTTTGGTTTCAAATTCCCTGGATACTCAAACTT
TTGGCAGTTTGCAACTAGAGTGTGCTTGGATTCAAATCTGGTTCCAAGCTGCTACGGCGCAAAGGACGTTGGGATGAAAA
TGCACATGAAAAACCTGATA-AGAATATTTTGCATTACCAAACCTACCTGCCTTTTCTG--TTCTTGGATTGCACTTATT
TTCCTTACATTAAACCTTCGATCAAATACTAAAAGGTCAATACAAGGCATGTGGATATATGGACGCATAAACAGGAGTGA
TGCAGACGGGAACT--
>chr1B_526
TGCT----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------TTGCAGCAGTTCGGGAGTGGGCCATACTGT
CGCTCCACGTCAGCGATCCGAGGCACTGACCCCTCCACCAATCAGCGCGCACCTCCCCCCCTCTATAAAATCCAGCACCC
AT-CTCCTCCATTCCCCACA--ATCTCAGTCCTCATCTTC----CCTGCCTCCAGCAAACT--CACACATCTCACCACCG
GAGCTCCCAACCCCACCCGAAGCGGCAGCCATGGCCCCCAAGGCAGACAAGAAGCCCGTCGCCGAGAACAAGGTCGAGAA
GGCGGCGGAGAAGACCCCCGCGGGCAAGAAGCCCAAGGCCGAGAAGCGGCTGCCGGCGGGCAAGACGGCGTCCAAGGAGG
CCGGCGGCGAGGGGAAGACCCGGGGCAGGAAGAAGGGCAGCAAGGCCAAGAAGGGCGTGGAGACGTACAAGATCTACATC
TTCAAGGTGCTGAAGCAGGTCCACCCCGACATCGGCATCTCCTCCAAGGCCATGTCCATCATGAACTCCTTCATCAACGA
CATCTTCGAGAAGCTCGCCGGCGAGTCCGCCAAGCTCGCGAGGTACAACAAGAAGCCCACCATCACCTCCCGGGAGATCC
AGACCTCCGTCCGCCTCGTGCTCCCCGGCGAGCTCGCCAAGCACGCCGTCTCCGAGGGCACCAAGGCCGTCACCAAGTTC
ACATCCTCCTAGACTGA---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------
>chr1B_560
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
CGCTCCACGTCACCGATCCGAGGCGCCAACCCCTCCACCAATCAGCGCGCACCTCTCCCCCTCTATAAATCCCAGCACCC
ACCCTCCTCCATTCCCCACACCATCCCAGCCCCCACCTCC----CCTGCCTCCAGCAAACT--CACAGCCCCCACCACCG
AAGCTCCCAACCCCACCCGAAGCGGCAGCCATGGCCCCCAAGGCAGACAAGAAGCCGGCCGCGGAGAACAAGGTCGAGAA
GGCGACGGAGAAGACCCCCGCGGGCAAGAAGCCCAAGGCCGAGAAGCGGCTGCCGGCGGGCAAGACGGCGTCCAAGGAGG
CCGGCGGCGAGGGCAAGACCCGGGGCCGCAAGAAGGGCAGCAAGGCGAAGAAGGGCGTGGAGACGTACAAGATCTACATC
TTCAAGGTGCTGAAGCAGGTGCACCCTGACATCGGCATCTCCTCCAAGGCCATGTCCATCATGAACTCCTTCATCAACGA
CATCTTCGAGAAGCTCGCCGGGGAGTCCGCCAAGCTGGCCCGCTACAACAAGAAGCCCACCATCACCTCCCGGGAGATCC
AGACCTCCGTCCGCCTCGTCCTCCCCGGGGAGCTCGCCAAGCACGCCGTCTCCGAGGGCACCAAGGCCGTCACCAAGTTC
ACCTCCTCCTAGACTGACGATGCGTCGCTTGTTGTGACAGATGTGGCTGTCTG---------------------------
--------ATGTATCTGC----------------------------------------AAGTAGAAGTAGTAGT------
TCGTGTGGTAGAA---GATTGCCAACGCTTTGTTGGCTTCTTGGTTGTG----AGAACTGAACGTGTTGCTTTTGCAAAC
TGA---AATCTATCTA----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------
>chr1D_560
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
CGCTCCACGTCAGCGATCCGAGGCGCTACCCCCTCCACCAATTAGCGCCCACCTCTCCCCCTCTATAAATCCCAGCACCC
ATCCTCCTCCATTCCCCACACCATCCCAGCCCCCACCTCC----CCTCCCTCCAGCAAACT--CACGCATCCCACCACCG
AAGCTCCCAACCCCACCCGAAGCGGCAGCCATGGCCCCCAAGGCAGACAAGAAGCCGGCCGCCGAGAACAAGGTCGAGAA
GGCGGCGGAGAAGACCCCCGCGGGCAAGAAGCCCAAGGCCGAGAAGCGGCTGCCGGCGGGCAAGACGGCGTCCAAGGAGG
CCGGCGGCGAGGGCAAGACCCGGGGCCGCAAGAAGGGCAGCAAGGCCAAGAAGGGCGTGGAGACGTACAAGATCTACATC
TTCAAGGTGCTGAAGCAGGTGCACCCCGACATCGGCATCTCCTCCAAGGCCATGTCCATCATGAACTCCTTCATCAACGA
CATCTTCGAGAAGCTCGCCGGGGAGTCGGCCAAGCTCGCCCGCTACAACAAGAAGCCCACCATCACCTCCCGGGAGATCC
AGACCTCCGTCCGCCTCGTCCTCCCCGGGGAGCTCGCCAAGCACGCCGTCTCCGAGGGCACCAAGGCCGTCACCAAGTTC
ACCTCCTCCTAGACTGAAGATGCGCCGCTTGTTGTGCCAGATGTGGCTGTCTG---------------------------
--------ATGTATCTCTG----CTGTTGACTCTGCTTAC--------CTGCAAGTAGAAGTAGTGGTAGTAGT------
TCGTGTGGTAGAA---GATTGCCAACGCTTTGTTGGCTTCTTGGTTGTG----AGAACTGAACGTGTTGCTTTTGCAAAA
TGA---AATCTATCTA-GAA------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------
>chr1A_563
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---TCCACGTCATTGATCCGAGGCACTCACCCCTCCACCAATCAGCGCCCACCTCTCCTCCCCTATAAAACCCAGCACCC
ACCCCGCTCCATTCCCCACACCATCTCAGTCCCCACCTTTC------CCCTCCAGCAAACT--CACACAACCCACCACCG
AAGCTCCCAACCCCACCCGAAGCGGCAGCCATGGCCCCCAAGGCAGACAAGAAGCCGGCGGCCGAGAACAAGGTGGAGAA
GGCGGCGGAGAAGACCCCCGCGGGGAAGAAGCCCAAGGCCGAGAAGCGGCTGCCGGCGGGCAAGACGGCGTCCAAGGAGG
CCGGCGGCGAGGGGAAGACCCGGGGCCGGAAGAAGGGCAGCAAGGCGAAGAAGGGCGTGGAGACGTACAAGATCTACATC
TTCAAGGTGCTGAAGCAGGTGCACCCCGACATCGGCATCTCCTCCAAGGCCATGTCCATCATGAACTCCTTCATCAACGA
CATCTTCGAGAAGCTCGCCGGGGAGTCGGCCAAGCTCGCCCGCTACAACAAGAAGCCCACCATCACCTCCAGGGAGATCC
AGACCTCCGTCCGCCTCGTCCTCCCCGGGGAGCTCGCCAAGCACGCCGTCTCCGAGGGCACCAAGGCCGTCACCAAGTTC
ACATCCTCCTAGACTGACGGCGTGCAGTTGGTT-----------------------------------------------
-TCTGCATCTGCATCTGTA----CTCTTGACTCTGCTTATCTATCTATCTGCAAGTAGTGGTGGTGGTAGTAGT------
ACCTGTGCTGGG---TGATTGCCAACGCTTTGTTGGCCCGTTGGTTGTA----AGAGCTGAAGTTGCTGCTTTGGCAAAC
TGA---AATCTATCTA-GAACTGAAGTTGTGGTCCTATATCTGTATTAGTGATCT-------------------------
----------TGTCTGGCCATTTGTATT--TTGGTTGCTGAACTCTGGTTATCTGCAACCAGTGCTGCTACTGAATTTC-
--------------TTGGAATTTGGTAGTTGTAAGAACTGAATTCAGTGGTGCAAACCGAGATTGAGAAATAA-------
-TTATGCATCAGGGAGTTGATTTTACCAGTAGGTTCTTGAGCTAGTCCATGCCATGTCTGTGATTTCATA--TATCGTAG
CA------ATGTAATTTGTGTTTCCAGATTCCTGATCCTACACCGGTAGGTTCTGCTTCTGCATTAGGCGCAGAACCCAG
TCTTGTTCAATCGGCTGTGCTTAATTTCCAGGCTCCGGC-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------GGTGCTCTATAGTTAGATGCTGGCGTGCGTTCTGACGATGTTAT
CATATCGCAAGAATTGTGCTAGCATTGCAATC----------AGTGTTTTTGGTTTCAAATTCCCCGGATACCAAAACCT
TGGGCAGTTTGCAACTAGAGTGTGCTTGGATTCAAATCTGGTTCCAAGCTGCTGCGGCACGAAGGACGTCGGGGTG-AAA
TGCACATGAAAAACCCGATACAGAATATTTTGCTTTACCTGTCTGTTCTGTT--------ATTCTTGGATTGCACTTATT
TTCCTTACATCATACCTTCAATTAAACACTACAAGGCCAATATAGGGCATGTGGATACAT--ACGCATAAACAGGAGTGA
TGCAGTCGGAA-----
>chr1A_632
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------AGCACCC
ACCCTCCTCAATTCCCCACACCATCTCAGCCCCCACCTCCCCTGCCTCTCTCCAGCAAACT--CACGCCCCCCACCACCG
AAGCTCCCAACCCCACCCGAAGCGGCAGCCATGGCCCCCAAGGCAGACAAGAAGCCGGCGGCCGAGAGCAAGGTGGAGAA
GGCGGCCGAGAAGACCCCCGCGGGCAAGAAGCCCAAGGCCGAGAAGCGGCTGCCGGCGGGCAAGACGGCGTCCAAGGAGG
CCGGCGGCGAGGGCAAGACCCGGGGCCGCAAGAAGGGCAGCAAGGCGAAGAAGGGCGTGGAGACGTACAAGATCTACATC
TTCAAGGTGCTGAAGCAGGTGCACCCCGACATCGGCATCTCCTCCAAGGCCATGTCCATCATGAACTCCTTCATCAACGA
CATCTTCGAGAAGCTCGCCGGGGAGTCGGCCAAGCTCGCCCGCTACAACAAGAAGCCCACCATCACGTCCCGGGAGATCC
AGACCTCCGTCCGCCTCGTCCTCCCCGGGGAGCTCGCCAAGCACGCCGTCTCCGAGGGCACCAAGGCCGTCACCAAGTTC
ACCTCCTCCTAGACTGACGACGCGCCGCTTGTTGTGACAGATGTGGCCGTCTG---------------------------
--------CTGTATCTGTAGTCGCTGTTGACTCTGCTTATCTCC--ATCTGCAAGTAGTGGTAGCTGTAGTGCGC-----
----GTGCTGGGTGATGATTGCCAACGCTTTGTTGGCTGGTTGGATGTA----AGAACTGAACGTGTTGCTTTTGCAAAC
TGATGAAATCTATCTA-GAA------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------
>chr1D_730
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------AGCGGCAGCCATGGCCCCCAAGGCAGACAAGAAGCCGGCGGCCGAGAACAAGGTCGAGAA
GGCGGCGGAGAAGACCCCCGCGGGCAAGAAGCCCAAGGCCGAGAAGCGGCTGCCGGCGGGCAAGACGGCGTCCAAGGAGG
CCGGCGGCGAGGCCAAGACCCGGGGCAGGAAGAAGGGCAGCAAGGCCAAGAAGGGCGTGGAGACGTACAAGATCTACATC
TTCAAGGTGCTGAAGCAGGTGCACCCCGACATCGGCATCTCCTCCAAGGCCATGTCCATCATGAACTCCTTCATCAACGA
CATCTTCGAGAAGCTCGCCGGCGAGTCGGCCAAGCTCGCGAGGTACAACAAGAAGCCCACCATCACCTCCCGGGAGATCC
AGACCTCCGTCCGCCTCGTCCTCCCCGGCGAGCTCGCCAAGCACGCCGTCTCCGAGGGCACCAAGGCCGTCACCAAGTTC
ACCTCCTCCTAGACAG------------TTGATGCGACAGATGTAGTTGGCTGCTGTTGTCTCCTGTTAGTGGTCGCTGA
CTCTGCTTATGTATCTGC----------------------------------------AAGTAGTGGTAGGAGTGGTCGT
CTGTG--------------CGCCAACGCTTCGTTGGCTAGTTGGTTGTG----AGAACTGAAGTTGCT------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------
>SNPs
------------------------S------------------------------------------------------S
-----------S---------S-----S-----------------------------------S-----S----------
---S----S----S---S-----S---SS-----------------------------S----------------S----
-------------S--SS------------S------S--S-S------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSS----------------------------------------S----------------
------------SSS-------S-------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSS--------SSSS-SS-S-SSSS----S-------------S-------------S--
--------------------------------S------------------S----------------------------
--------------------------------------------------------------------------------
----------S-------------------------------------------S-------------------------
------------S--------S----------------------------------------------------------
-----------------------------------------------------S----S---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----S----------------------------------------------------S---------------------
-----------------------------------------------------------S--------------------
----------------------S--------S-------------S---------SSSSSSS--------S------S--
------------------------------S---------------------------------S--S--SSS-SSSS-S
SSSSSSSSSSSSSS----------------------S---------S---------------S---------S-------
-----------------------S----------------------------------------------SS--------
------------------------------------S-S-----------------------------------------
------------S------------------------------S-S--SS--------S------S-S------------
----------------S-----------S------------------S------S----------S--------------
----S-------------S--------------------S--S-S-SSSS-S----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--S------------S-------S----------------------------------------------S-------S-
---------S---S-----S----------------------S-S---S------S--SS--------------------
------S-------------SS--------S--S-----------------------S---S-----S-----S------
-----------SSSSS
>forward_455
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------TGCCTTTGCAACAGTTTGGG-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------
>reverse_2554
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------------------------CGAGTGA
TGCAGTCGGAACT---
