>input_sequence_86925
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-ATGAGTTCATCGGAGGAGAAGACGTCGTGGCCGGAGGTGGTGGGGCTGCCCGTCGAGGAGGCCAAGGCGATCATCCTCC
GCGACAAGCCCGGCGCCGACATCGTCGTCCTTCCCGTCGGCTCCATCGTCGACGCGCAGTTCATCGCCAACCGCGTCCGC
ATCTTCATCAACGGCACCACCGTCGCCGAGACTCCCATTGTTGGCTAG--------------------------------
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>chr5B_1_TraesCS5B01G280900
GGTCGATGCGTCAGTTCCTGCTCTGGAGATGGACCAGTGGATGATGGCGGGGTCAGCCTCTGAGAGTGCGCCAGACCGGT
GTGGGACCCAGTCCCAGTGTGTGGCTGGGCTAGGGCATCCTGCTATAAATGTTAGGGTTTGGTGCGGTGTCTGTTTGGTA
TTAGGTCCGGATAATCGGCACATCTTCATCAAGTGGATAGGAGTAGCAACATGTGCGGACTAATGTATTACTTTGTACGG
TATTTGTGAATAATTAATAAAATGGCTGCATGCATCGTCCAAATGCAGAGACCAGGTATATCCTCCTATTCAAAAAAAAA
GTGTCTGTCTCAATATGAATTGGCATCTGGCTCCATTGCAAGGCCAAAGCCAAACCAGACTTGCTCCAAAACGATGTCCT
AGGAGGGATAACGGCATCGAAGGTGCCATCATCCACTTCCAATGCTTCGGAACAATAATATAAACATCTGCATGAAGAAC
CTGGCCCCGTAAAAAGAAAAACCATCTGCATGAAGAGAAAACAACTTCACCCGTGTGATTTCAGCAACTCATCAAAAAAT
TGCAAGTTGTCCATATCCCGGGGGCCGACATCTATAGGTAGTTTTTCTTCTTCTTC---TGTTAAACT------------
---AACTAGCTTGCCGTTATTATTTTTCAAAATG----------------------------------------------
--------------------------------------------------------------------------------
------------------------------TTGTTGCAATGTGCATGCGTGCGACACCCGGAATATGTCGTCCCGGCTGG
AAGAGTCCAGTTTTCCTTATATATATATAGCAAAACTAAAGACAATTCAAGGCCTGACTATTTGTTCTGCATATCGATCT
AGGTTGCTTGTTTGACCTGCCCTGGTCCGTACGTACCTGTAGCTCGTGCGGCACGTGTGTACACGCATACAATTCT----
------ACGCATGGAAGTTCTGAAGCTAGCTGCATGCATATCTCTCTCTATAAATACATCGGCCAATACGCTATGCAAAT
CC-------------TAACAGCTACTAGC----TCACAAGCAGTGGTCTTCTGATCCTGAACAACCGATCAACCGATCAC
GATGAGTTCATCGGAGGAGAAGACGTCGTGGCCGGAGGTGGTGGGGCTGCCCGTCGAGGAGGCCAAGGCGATCATCCTCC
GCGACAAGCCCGGCGCCGACATCGTCGTCCTTCCCGTCGGCTCCATCGTCGACGCGCAGTTCATCGCCAACCGCGTCCGC
ATCTTCATCAACGGCACCACCGTCGCCGAGACTCCCATTGTTGGCTAGCTCTAGCTCATAACTAGCCTGGCTTGTCGTTG
CTGGATCGATGCAAGTATGCATATGTTACCGGCTCGACAAGTCCAATAAATAACCATGGGAATTATCATGTGTGCGTTTG
TTATGTATGTGTCTACAATTTCGGTATATACGTGTATATGTACTGTGTACACTGGTACCTTATTCTTTTTACCAATAAT-
-------------------------------GAATTAATGATGTGTATTTGGCGTCAAGTTATTGTTTTTACAT---TAT
ACAGTGCTAACTGCTC--TATATGAGACTCTTTCATATGTCAGAATAGAAG-----------------------------
------ATATAATTTATTTTATATTTAAGTATACATGTGAATTGCCTGACCCTATTCGCGAGTTTGGATTTTGGTTTTAC
TGATTAATGCATGAAACTTAATAACTTATCTATATCAGAGTTAATATAAGCTTCAACCTGTAGTTTTTTATAGATTTTTC
CCGTAGATTATTAGATAACTACAACCGTGCAAAATGGTTTTTGGGAATCCAAATGGGTAGTATATATCAATCTTGTGTCA
CGTAAAAACACATCTGGACGGGTTGCTGGACAAAGCTTGAACTTAGACAATCAAATTATTTCTCATCCCTCTTACTGGC-
--CAGCAGCTTCTAGAAGGGTAGATGAGTTTTTTTC--CTCGAAAAGGAGACGGGTAGATAGGTTTAAAAAG-CCGTTTA
ACTATGAAACTGTTTATTTTGCCCCATCAACTTACGGAACCGTCAAAGTTAACTAAGATCAGTTTAAGGTGGTCTT----
------------------------------GAGTTAACAGTACAACTAAATGAGTTCAAATGGTAGCTCTTTATAC--AC
AGTGTGGATTCTTAAGATAAATGTATTTCTCTGGTTGTT---------CAGCATACTTACCAAAGGTAACCTACTTAAAC
AAGGGTGGAATGGAATTATGGAAATAAGTATTATGTTTTTTGTGGTCAAAATTAAACAAACCATCTGTTTTTTAAGTGCC
CGGTTCGCAAATTTATCTTGAGTAACTTTCAATATGCTTTCAACTTTAGTG
>chr5A_317
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----------------------------------------------------------------------------AACA
GAGTCTGTCTCAATATGAATTGGCATCTGGCTCCATTGCAAGGCCAAAGCCAAACCTTCCTTGATCGCCAAGAGC-----
-------------------------------TCCGCTTCCGATGCTTCGGAACAATTGTATAAG----------------
----------------------CATCTGCATGAAGAGAAAACAACATCACCCGTGTGATTTCAGCAACTCATCAAAAAAT
TGCAAGTTGTCCGTATCCCGGG-CCCGACATCTATAGGTAGTTTTTCTTCTTCTTC----GTTAAACT------------
---AACTAGCTTGCCGTTATTATTATGTTAAAAAAAAAGACCAGCCCGGGCTAGACTAGCCTGTTGGCATTTTTTTTATA
AAAAATAACTCTATGAGCACCAAACGTTCAAGCCGAGATTTAAACCTTGGTGGGCTGGCTAGGAACTTCTGCGCCTTGCT
AACTGAGCTACGTCCGGTTCTCTTATTATATTGTTGCAATGTGCATGCGTGCGACACCCGGAATATGTCCTCCCGGCTGG
AAGAGTCCAATTTTCCTTGTAGCAAAACT---------AAGACAATTCAACGCCTGACTATTTGTTCTGCATATCGATCT
AGGTTGCTTGTTTGACCTGCCCTGGTCCGTACGTACTTCTGGCTCGTGCGGCACGTGTGTACACGCATAGTACAATTCTA
GC-AGCACGCATGAAAGTTCTGAAGGTAGCTTCATGCATATCTCTCTCTATAAATACATCGGCCAGCACGCTATGCAAAT
CCACCAAGCAACACCTAACAGCTACTAGC----TCACAAGCAGTAGTCTTCTGATCCTGAACAACCGATCAACCGATCAC
GATGAGTTCGTCGGAGGAGAAGACGTCGTGGCCGGAGGTGGTGGGGCTGCCCGTCGAGGAGGCCAAGGCGATCATCCTCC
GCGACAAGCCTGGCGCTGACATCCTCGTCCTTCCCGTCGGCTCCAGCAGCGACACGCAATTCATCGCCAACCGCGTCCGC
ATCTTCGTCAACGGCACCACCGTCGCCGAGACTCCCATTGTTGGCTAGCTCTAGTTCATAACTAGCCTTGCTTGTCGTTG
ATGGATCGATGCAAGTATGCATATGTTACCGGCTCGACAAGTCCAATAAATAACCATGGGAATTATCATGTGTGCGTTTG
TTATGTATGTGTCTACAATTTCGGTATCTACGTGTATATGTACTGTGTACACTGGTACCTTATTCTGTTTACCAATAATG
AATTAATTATGTGTATTTTTTTTGCGGGGGGGAATTAATGATGCGTATTTGGCGTCAAGTTATTGTTTTCACAT---TAT
GCAGTGCTAACTGTTCTGTATATGAGACTCTTTCATAAGTCAGAATAGAAG-----------------------------
------ATATAG-----TTTACATTTAAGTATACATGTGAACTGCCTGACCCTATTCGTGAGTTTGGATTTTGGTTTTAC
TGATTGATGCATGAAACTTAATAACTTATCTATATCAGAGTTAA-----GCTTCAACCTGTAGTTGTTTATAGATTTTAT
CCGTAGATTATTAGATAACTACAACCGTGCAAAATGGTTTTGGGGAATCGAAATGG---GTATATATCAATCTTGTGTCA
CGTAAAAACACATCTGGACGGGTTGCTGGACAAAGCTTGAACTTAGACA-TCAAATTATTTCTCATCCCTCTT---GGC-
--CAGCAGCTTCTAGAAGGGTAGATGAGTTATTTTGTTCTC---AAGGAGACAGGTAGATAAGTTTAAAA-G-CCGTTTA
ACTATAAAACTGTTTATTTTGCCCCATCAACTTACAGTACCGTCAAAGTTAACTAAGATCAGTTTAAGGTGGTCTT----
------------------------------GAGTTAACAGTACAACTAAATGAGTTTAAATG------------------
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>chr5D_504
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-----------------------ATCTGCATGAAGAGAAAACAACTTCACCCATGTGATTTCAGCAACTCATCAAAAAAG
TGCAAGTTCTCCATATCCCGAGGCCCGACATC--TAGGTAGTTTTTCTTCTTCTTCCTCTGTTAAACTAACTAGCTTGAA
AAAAACTAGCTTGCCGTTATTATTTTTCAAAATG----------------------------------------------
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------------------------------TTGTTGCAATGTGCATGCGTGCGACACCCAGAATATGTCCTCCCGGCTGG
AAGAGTCCAATTTTCCTTATAGCAAAACT---------AAGACAATTCAAGGCCTGACTATTTGTTCTGCATATCGATCT
AGGTTGCTTGTTTGACCTGCCCTGGTCCGTACGTACTTCTGGCTCGTGCGGCACGTGTGTACACGCATAGTACAATTCTA
GCAAGCACGCATGAAAGTTCTGAAGCTAGCTTCATGCATATCTCTCTCTATAAATACATCGGCCAATACGCTATGCAAAT
CCACCAAGCAACATCTAACAGCTAGCTCACAAGTCACAAGCAGTAGTCTTCTGATCCTGAACAACCGATCA--------C
GATGAGTTCGTCGGAGGAGAAGACGTCGTGGCCGGAGGTGGTGGGGCTGCCCGTCGAGGAGGCCAAGGCGATCATCCTCC
GCGACAAGCCTGGCGCTGACATCCTCGTCCTTCCCGTCGGCTCCAGCAGCGACACGCAGTTCATCGCCAACCGCGTCCGC
ATCTTCGTCAACGGCACCACCGTCGCCGAGACTCCCATTGTTGGCTAGCTCTAGCTCATAACTAGCCTGGCTTGTCGTTG
CTGGATCGATGCAAGTATGCATATGTTACCGGCTCGACAAGTCCAATAAATAACCATGGGAATTATCATGTGTGCGTTTG
TTATGTATGTGTCTACAATTTCGTTATATACGCGTATATGTACTGTGTACACTGGTACCTTATTCTGTTTACCAATAAT-
-------------------------------GAATTAATGATGTGTATTTGGCGTCAAGTTATTGTTTTACATTATATAT
ACAGTGCTAACTGTTC--TATGTGAGACTCTTTCATAAGTCAGAATAGAACATATAGTTCACCCGCAAAAAAAGAAAGAA
TAGAACATATAG-----TTTATATTTAACTATACATGTGAATTGCCTGACCCTATTCGTGAGTTTGGATTTTGGTTTTAC
TGATTGATGCATGAAACTTAATAACTTATCTACATCGGAGTTAA-----GCTTCAACCTGTAGTTGTTTATAGATTTTCC
CCCTAGATTATTACATAACTACAACCGTGCAAAATGGTTTTTGGGAATCCAAATGG---GTATATATCAATCTTGTGTCA
CGTAA-AACACATCTGGACGGATTGCTGGACAAAGCTTGAACTTAGACAATCAAATTATTTCTCATCCCTCTG---GGCG
GTCAGCAGCTTCTAGAAGGGTAGATGAGTTTTTTTTCTCTCGAAAAGGAGACGGGTAGATAAGTTTAAAA-GGCCGTTTA
ACTATAAAACTGTTTATTTTGCCCCATCAACTTACCGTACCGTCAAAGTTAACTAAGATCAGTTTAAGGTGGTCTTGAGT
TTTTTTTTTTTTGCGCATAAAGGTGGTCTTGAGTTAACAGTACAACCAAATGAGTTTAAATGTTAGCTCTTTATACAAAC
AGTGTGGATTCTTAAGATAAATGTATTTCTCTGGTTGTTCCTGAAAAACAGCATACATACCAAAGATAACCTACTTAAAC
GAGGGTGGAATGGAATTATGGAAATAAGTGTTATGTTTCTTGTGGTCAAAATTAAACAAACCGTCCGTTTTTTAAGTGCC
CGGTTCCCAAATTTATCTTGAGTACCTTTCAATGCGCTTTCAACTTTAGTG
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--S-
-S------------------------------------------------------SSS----S--SSS--SSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---S-----S---------------SS-----SSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSS----------------------------------------------------------
-----------------------S--------------------------------------------------------
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---------------------------------------------------------------------S----------
---------S-----------SSS-S-SSSSSSSSSSS------------------------------------------
------------------------------------S-S-S----------------------------SS-SSS-----
-------------S-----------------S------------------------------------------------
--------------------------------------------S-----------------------------------
---------S----------------------------------------------------------------------
----------S-----S------S---------------------S-SS----S--------------------------
------S-------------------------------------------------------------------------
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------------------------------------------------------------------S-------------
---------------------------------------------------------------------S----------
-------------S-----------------------S------------------------------------------
-----------SSSSSS-----------------------------------------S---------------------
-----S--------------------------------------SSSSS----------------S------------S-
--------------------------------------------------------SSS---------------------
-------------------------------------------------------------------------SSS----
-----------------------------------S-------------------------S--------S---------
-----S-----------------------------S-S------------------------------------------
--------------------------------------------------------S-----S-----------------
--------------------------------------------------------S--------S--------------
S----------------------------S--------S-----------------------S--S--------------
------S-----------------S--------SS----------------
>forward_441
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---------------------GGTGCCATCATCCACTTCCA---------------------------------------
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>reverse_2075
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--------------------------------------------------------------------------CTGGCC
AGCAGCTTCTAGAA------------------------------------------------------------------
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