>input_sequence_86898
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-------ATGGCTCCCCGGGTCGCCGTGCTGCTCGTGGCAGCGGTTGCGGCCTCTGCCCTCGCGTCCGCGTGGGCGCAGG
ACTTCATGGCGCCTTCGTCGGCGCCGGCTCCCGCCCCGGACACGGGCGGCGCGGCGACCGGCGCCGCTCCGGCCTCCGCC
CTCGCCTTGGTGTCGTTCGCGCTGGTGTCCCTGCTGGGGGCGAGGCTGATGCAGTAG-----------------------
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>chr7A_1_TraesCS7A01G227900
GGCAATCCTTCTTTTCAGAAAAAAAAAATCATCCGCTCCGATAAATCTTGAAGTTATAATTTTGACCATATGTATTTCAA
CAGTTTGCCATATGGAGGTCGGGGGTATTAAAAGTTTCCAACTTCCATAATCCGGAAAGGATAAAAGTATGTGCGAAGCA
TTGTGGCTTGAACATCCGGTTCAAATCTTTCTCAGTTACCGGCTCGTTTGTTGAGATAGATTTTAGCGCTCGCGGAATCT
TTGTGTGTTACCCAACTTCGCCGGCCGAGTCACGGAATCAATTGCGAACACTGTGCTGTCAGCCATTCATGACCCGAGAA
TGTTCACGAAGAAAAATGGCCAGCCTTCCACAATCTTCCGTGAAGAACTTTTTTTTAGGGTATCTTCCGTGAAGAACTAG
CAAGTAGATCTCGTATGTCTCATATCCGGTTCATTCCAGGACGTAACAAACTGCAACAAGATCTTCTGAACAAACCAACG
ATTAATCTTCTTTCCGGTTCAAAGTAAGTAGTAGAACCTCCGATTCCCCGTTCATC-----GTCTGAAAACAGCGCGCCC
CTGTGCCAATGAAGAAAGCAAAGCGCCGTTATTAAGCCCCACGCAGCACGACACAGCAACCGGTAATGTGCAAGCCAAGT
CACCACCC------TGCTCCAGCCTTCCACAAGGCGCGTGACCCCGC--CCCGTCGGTGCGGTCGAGTCGGGCAACACGA
CTGCGCGTCA----CGTCCACCCTCCCCAAAGCCAGGGGCGCCCGCCCGCCCT----CCCGCCCGAGCCATGGGCAGGGA
GCCACGCGCTCGCGCCGAACCAAGCCAGCAATCCCACGCCGCACGACCGGCCGGCCGTGTCGTGCCGTGTGGGCAAGTTC
GCGCCCGTTTCAGCACCCCCTGCCAGCAACCTGTAGCAGCTTGCTGT---TATAAAGCCCACAGCAATCGTCCCTCAATT
GCATTCCACGGCTCCACCGCAGCACAAATCTTGG----------------------GCTGGGAGCATCTCGCGAGGTTGT
GAATTC-ATGGCTCCCCGGGTCGCCGTGCTGCTCGTGGCAGCGGTTGCGGCCTCTGCCCTCGCGTCCGCGTGGGCGCAGG
ACTTCATGGCGCCTTCGTCGGCGCCGGCTCCCGCCCCGGACACGGGCGGCGCGGCGACCGGCGCCGCTCCGGCCTCCGCC
CTCGCCTTGGTGTCGTTCGCGCTGGTGTCCCTGCTGGGGGCGAGGCTGATGCAGTAGACGGCCATGTCGGCCGGCCTTCG
CCGGCGTACCGATTTGGATCGGATGCCAATGACGGCTGCTTGTATATTTCTTTTGAGAGATTGGCGTCCCTTGTAGGCTG
GTCTCGTGTGGGCATTCTCTTGTATCGTACTCCTACCATCTCTGATCTTTGTGAGACTGTGAATAAAGCTGGCTCGATTC
TGTGTTCATCTTACAGTTCACTAGTTCAGTGTATGCTGAGTTTTCCTTCTTTTTCTTAGCAAAACAGTGTATGCTGATTT
TTTTTGAGCGGTAACAGTGTATGCTGATGCCGGGGCGTCTCTGAAAGGATATCTGTCGCTCTTTGCGAGCGTTACCACGT
CGATCGCCTACAGGCGCGTCAAGCGGGCCGGCCACTGAGCGGGAGCCTTCGCAGCGCTTTTGGGAACTTTCCGGCTTTGT
TTTTCTTCTCTGTGTTTTCTGCTCGGTTTTCTGGTTTTCTGTTTTTTTCTTGTTCCTTTTCTGTTTCTGTTTCTTTTTAA
TTTTCCTTTCTTAATTGTTTCTTCTTAAATCCATGACTATTTTTTTAAAACAATTTTTTACTGGTTTTTTGTTTCCTTTT
CAGCTTTTTGTCTTTTTGTTTTTTGGTTTCATTTTTATTTTCTACTCTCTTTTTTCTCAAAATTTCGCAAATTTCAAAAA
GTCTCAAAACTAAAAAATAAATCTAGTTTTTTAAAAATATTTACTCCCTCCTTTCATCTATATAGGGCCTAATGTGTTTT
TTAAGACCGCCTTTGACTATCGACAAGATTAATAATACATGACATGCACAAAGTAAAAATTATATCATTGAAAACTCCTT
TCACACACGAATTTAACGATGTGCTTTGTGTAAGTTGCATGTCATATATTATTGCTCTAATATTTGGTCAAAGTTAGCCT
CGAAAAACTCATTAGGCCCTATATAGATGGAAGGAGGGAGTACGTCTTTAAAATATGTTTGTGTTTTATCAAAAAAGGTT
CTGAATTTTAAAACTTG---------------------------------------------------------------
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>chr7B_465
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----------------------------------------------------------------TCTGAAGAAACCAACG
ATCAATCTTATTTCCGGCTCAA-------AGTAGAACCTTCGATTCCCCGTTCATCATGTCGTGTGAAAGCAGCGCGCCC
CTGCGTCAACCAAGAAAGCAAAGCGCCGTTATTGAGCCCCACGCAGCACGACACAGCAACCGGTAATCTGCAAGCCAAGT
CACCACCCGGCCCCTGCTTCAGCTTTCCACAAGGCGCGTGACCACCCCGCCCGTCGGTGCGGTCGAGTCGGGCAGCACGA
CTGCGCGTCACGTCCGTCCACCCGCCCCAAAGCCAGGGGCGCCCGCCCGCCCGCCCGCCCGCCCGAGCCATGGGTAGGAA
GCCACGCGCTCGCGCCGAACCAAGCCAGCATTCCCACGCCGCACGACCGGCCGGCCGTGTCGTGCCGTGTGGGCAAGTCC
GCGCCCAT------------TGCCAGCAACCTGTAGCAGCTTGCTGATACTATAAAGCCCACAACACTTGCCCCTCAATG
GCGTTCTACGGTTCAACCACAAACACAAATCACTCTCCTGGACCGCGTAGTCCCTAGCTCAGACCATCTCGCGAGGCTGT
GAATTCGATGGCTCCCCGGGTCGCCGTGCTGCTCGTGGCGGCAGTTGCGGCCTCTGCCTTCGCCTCCGCGTGGGCGCAGG
ACTTCATGGCGCCTTCGTCGGCGCCCGCTCCCGCGCCGGACACGGGCGGCGCGGCGACCGGCGCCGCTCCGGCATCCGCC
CTTGCCTTGGTGTCTCTCGCGCTGGTGTCCATGCTCGGGGCGAGGCTGATGCAGTAGACGGTCATGTCGGCCGGCCTTCG
CTGGCGTGCTGGTTTGGATCGGATGGCGATGACGGCTGCTTGTATATTTCTTTTGAGAGATCGACCTCTCGGTCTTGTTG
AACATTCTCTT------TCTTGTATCGTAGTATA------TCTGATCTTTGTGAGACTGTGAATAAAGCTGGGTCGATTC
TGTGTTCATCGTGCAA--------TTCAGTGTGTGCTGATTTCCTT---TTTTGTTTAGCAAAACAGTGCTCATGC----
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>chr4A_1915
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-----------------------------------------TACTCCCTCCTTCCATCTATATAGGGCCTAATGTGTTTT
TTAAGACCGCCTTTGACTATCGACAAGATTAATAATACATGACATGCACAAAGTAAAAATTATATCATGGAAAACTCCTT
TCACACACGAATTTAACGATGTGCTTTGTGTAAGTTGCATGTCATATATTATTGCTCTAATATTTGGTCAAAGTTAGCCT
CGAAAAACTCATTAGGCCCTATATAGATGGAAGGAGGGAGTACCCATCTTTCCTCCTTTTAAGTACGTTCAACTGTTATT
CGCTATCCGGTATGGGACTAAAAATTTAAGTTAAAATGTCGCGCGAGCAAAAAATAAAAGCAGCTAGTATTCGAACACAG
CACCGCATGAAAAGGCCAATCGAGGCATTTTTCTATAACGCCTGCAAGATCTGGCATTTCCTTAAATTGCCACTAAAACT
TCTCCGTGCATCTATACAGGTCCCCCTGTCCCGCGCACCCGTAACTTAAGCCCTTCCCTTGCCCCCCATCCGTGTATATA
ATTAACTATACACGCCTACACGCACCCTACCTAACCCTTGAATACAATGTAATAGCGAGAGAGCATTCACCTGTTAATCT
GCTTTCTGAAATGGCACTCCCTCCTTCCATCTATATAAGGCCTAATGTGTTTTTTAAGACCGCCTTTGACTATCGACAAG
ATTAATAATACATGACATGCACAGAGTAAAAATTATATCATTGAAAACTCCTTTCACACACGAATTTAACGATGTGCTTT
GTGTAAGTTGCATGTCATATATTATTGCTCTAATATTTGGTTAAAGTTAGTGTCGAAAAACTCATTAGGCTCTATATAGA
TGGAAGGAGGGAGTAC
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------S---------
--S------S-------S----SSSSSSS----------S-----------------------S-----S----------
---S-S---SS----------------------S---------------------------------S------------
------------------S----S-------------------S-S----------------------------S-----
-----------------------S----------------------------S---------------------S---S-
------------------------------S-----------------------------------------------S-
------S-SSSSSSSSSSSS--------------------------S----------------S--S-S-S--------S
--S---S----S--S---S--SSSSS--SSSSSS-------------------------SS--S------------S---
---------------------------------------S--S---------------S----S----------------
-------------------------S--------S--------------------------------------S------
--S-----------SS--------------S----S-------------------------S------------------
-S-----S-S-S-------------S-S---------------------------------S-S-S--S-SSSSSS-S--
SS-SSSSSSSSSSSSSS------------S-SSSSSSSSS--------------------------------S-------
----------S-S--SSSSSSSSS--------S------S--SSSSSSS----SS--------------SSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------S--------------------------
--------------------------------------------------------------------S-----------
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-------------------------------------------SSS-S-SSSS-SSS---SS--SSSS----SSSSSS--
-SSS--SSSSS-SSSSS---------------------------------------------------------------
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>forward_217
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-------------------------------------ACCGGCTCGTTTGTTGAGAT-----------------------
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>reverse_1655
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------------------------------------------------------CGCTTTTGGGAACTTTCCGG------
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