>input_sequence_86885
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----ATGGCGTGGAGGATGAACCAGGGAGCCTCGGCGAGGAAGCGCGTGGAGGCAGGGCCGACGGGAGCAACAGCTCAGA
CGGCAAGGCGCGGCCATGGGGATCGGACGCGACGCGCGGGAAGAGCCTGGAGGGCTGCGAGATCGAGCGCAAGCTCTTTT
GCATGCGTTGGTGGCGGCGCTATCGGGAGGGAGATGGGGATAGAGGAGAGCTGA--------------------------
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--------------------------------------------------------------------------
>chr3A_1_TraesCS3A01G273400
AAACGAGGAGGAACGCGCAAA-GACAACTCGGACACGGTGCCAACACGAA---CATCTCATACAACAAACATGCATTCGT
TCACGGGTGTCGTCTCGG-GGTTATACCTTCGAAGCGTGCATTCAGGACGGTTCGGGT-TCGATGCGATGTAGTTGTTCA
TGGGTCGTAGTCGACGTAGTGGTACTATCGGTACTCGGCGACGGTAGTGAAAGTAGTGGTAGACGACAACGGTAGAGGTA
CTTGCGATATTGGCGACGGTAGTCGTACACGGTTCGTAGACGTTCGAGTCATCGGTAGAGGTACTTGTCGCATCATCGGG
CGTATTCGACCTTGGCGTATCCGTGCGTAGGGGTAC-TTGCCAAAATCCACGGGAACAGTAGTGGTACATGGTCTTCGCT
TTGTAGTCGGACTTGGCGAATCCGCGTAGTTGTACACGGGTCGTTGCACACTTGACGAATCCGAGTCTTTCAAGGTCGGT
CTTGGCGAGGGATGGTCGTAGTGGTACTTGTCGGTCTCGGTCAGGGCATTCCTGGTCTTGAGGAGGTCCCCGAAAGAGAG
CTTGGCGTCCACGGGGACATGGAGCTGCGGTCTTGGCGTCGGGCAAGGGATCGA--------AA--------GCCAACAA
GGGTTGCGTGTAAGAGTGTTGCAGGAGAGGCCGGAGTTGGGCAGACG------GCAA-CCCGTTCCCGGCAGCGGTGCAG
GAAGCCAGCGGTGGCT--------------TGAGGCGTCGGTGAAGGAGGCGGCCCCCATGTCAGGTCGAAGAGCGGTCG
GGCGATGCAGGACGAGCACGTGCGCGAAGCAGAGGGCTCCCGACGCGGCTCAAGTGAAGCAGAGGCAGCAGCGACGAGGC
TCGAGTGGCTTGGCCCTCCGACAAGGCGGGGAGGCGAGGAAGGCTGGAGTTACGGGCGTTGGAGGCGGGGCCGGTCGATG
ATGTCCGGTCGAGGATGAAGCCAGAGAAGTAGGGGCGGAGCTGGGAAGAAGTGGCTGCAGTAGGAGCTTGGGGTCGGGTT
GGCCATGGCGTGGAGGATGAACCAGGGAGCCTCGGCGAGGAAGCGCGTGGAGGCAGGGCCGACGGGAGCAACAGCTCAGA
CGGCAAGGCGCGGCCATGGGGATCGGACGCGACGCGCGGGAAGAGCCTGGAGGGCTGCGAGATCGAGCGCAAGCTCTTTT
GCATGCGTTGGTGGCGGCGCTATCGGGAGGGAGATGGGGATAGAGGAGAGCTGAGCAGCGTGGGGATCGGGCTAGGGTTA
GATAGGCGCTGA--TTGGGCCTTGGGCCGGCCCAAGAGGCCAGCTAGGCTGCAAGGCTGTCTATCTCTCTCTCTCTA-CT
CTTATTTCCTTT-----------------AGTA-CAAAAGAATTAGAG--AGAAG-AAA----AGAAAGA-GAGGGTTAG
GGAAAG--AATTTGCGCACGGGGTTAATTTTCCCGGGCTCACAAAAATGACCTTGATCCAAGAAA-AATAGAAA-GTGAG
CATGGGCGTGAAG-TTGAAATCAACCTCATTTGAATTTAA-TTCAAATGAGTGTGAGAAAGAAGTGGGTATTCGCTAGGT
-CC--AAAAATGTTGAGAATTTAGGAGGAGCCTCGATAAATTAAGAAAGAATTATAGACAAGGTTTGGAGGTC--AAACT
TGAA----GTAG-AAAA--GGGATATGATTGAAATTGCAAGTGTGTTGCGGTTAATTCCAAACTAATGGAATA-TTTATA
GTAGCTCCCTAAATATCGAGAGGATATGTTATAAAGAGAAATCACCATGTGAATTCCCTTGAGTTAAATAGATCGAAAGA
TCTATGCAATTTATTTAATTGAGTTTTAAA----------AAGGG-GTTGCATGATGACATGATGCAATGCAAATGATGC
AATGATAAATGCAATAAACAAAACA-AATCACACGACGAAACTCGAAAAACATGGAAAGCGTCTGAAACGTCGGTTTTGG
GTCGTCACAGCCATCCATGCCGCATTTGCTGTTGCAGCCCCTCGTTCTCTCTAGGCAGGTCGGTCTCCTTCTTCCCCTCA
AGCCACCTTTTCTCTTTCTCATCCAGGAGGCTTGCGTCCTCCAACATTATCATCGAATCCTCCATCTCTCGAGCAAGTTG
CAACCTCTCCTTCTCGAGCTCTATTGATCCAAAAGTACGGGCCTTCTTGAGCTCCCATCTGAGTCACATCTCTTTCTTCT
CCAACTCTATTTTCTCTCTCAATTTTCAGATAGTTGCTCTCAATTTGTAACTTGTTGTTCACCCTCTCTCAGTT
>chr4A_1
AAATGAGGAGGAACGTGCAAC-GTCAA-TCGCATACAGTGAAAACACGCGGTTCATCCCATACATCACTCATGCATTCGT
TCACGTCGGTCATCTCGGCGGTTATACCTTCAAAGCGTGCATTCAGGACGGTTCAGGT-TTGATGCGATGTAGTTGTTCA
CGGGTCGTAGTCGATGTAGTGGTACTATCGGTAATCGATTACCGTAGTGGAAGTATTGGTAGACGACAACGGGAGAGGTA
CTCGCGAAATTGGCGACGGTAGTCGTACACGGTTCATAGACGTTTGAGTCATTGACAGAGGTA-------CATCATCGGG
CATAGTCGACCTTGGCGTATCCGTGCATAGGGGTACTTTGCCAAAATCCACGGGAACAGTAGTGGTACATGGTCTTCGCT
TTGTAGTTGGACTTGGCGAATCTTCGTAGTTGTACACGGGTCGTTGCACACTTGATGAATCTGAGTGTTTCAGGGTCGGT
CTTGGCGAGGGTTGGTCGTAGTGGTACTTGTTGGTCTCGGTCAGGGCGTTCCTGGTCTTGAGGAGGTCCCCGAAAGAGAG
CTTGGCATCCACGGGAACATGGAGCTGCGGTCTTGGCATTTGGCAGGGGATCGA--------AGCCTCGAAGGCCAATGA
GGGTTGCGTGTGAGAGTGTTGTAGGGGAGGCCGGAGTTGGGTGGACG------GCAAACCCGTTCTCAGCAGCGGTGCGG
GAAGCCGGCTGTGGCT--------------TGAGGCGTCAGTGAAGGAGGCTGCCCCCGCTGCAGGTCGAAGAGTGTTCA
GGCGATGCAGGACGAGCACGTGCACGAAGCAAAGGACTCCCGGTGTGGCTCAGGTGAAGGAGAGGCAACGACGAGGAGGC
TCGAGCGGCTTGCTCGCCGACAACGGC--------------------------------TAGAGGCGA------------
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--------------------------------------------------------------------------
>chr4A_1
AAACAAGGAGGAACGTGCAAT-GACAACTCAGACACAGTGCACACACAAG---CATCTCATACAACACACATGCATTCTT
TCACGGGCGCCATCTTAG-GGCTATACCTTCGAAGCATGCATTTTCGGAACGGATCAAGTCAAAGCGGTGTAGATGTACA
CAGTGTATAGTCGAAGTGGCGGTACTATTGGTCCTCAGCGACGGTACTGGAAGTAGTGGAACACGACGACGGTAGAGGTA
CTAT-GATATTGGCGATGGTAGTCGTACACGGTTCGTTGATGTTTGAGTCATCGGTAGAGGTACTTGTCGCATCATCTGG
CATAGTCTACCTTGGCGTATCCATGTGTAGGGGTAC-TTGCCAAAATCCACGGGAACAGTAGTGGTACATGGTCTTCAAT
TTGTAGTCGGACTTGGCGAATCCGCGTAGTTGTACACGGGTCGTTGCACACTTGATGAATCCGAGTCTTTCAGGGTCGGT
CTTGGCAAGGGATGGTCGTAGTGGTACTTGTCGGTCTCGGTCAGGGCATTCCTAGTCTTGAGGAGGTCTCCGAAAGAGAA
CTTGGCGTCCACGAGGACATGGAGCTACAGTCTTGGCATCAGGTAGGGGATCGA--------AG--------GCCAACGA
GGGTTGTGTGTAAGAGTGTTGCAGGAGAGGCCGGAGTTGGGCAGA-----------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------
>chr1A_1
AAACGAGGAGGAACGTGCAAT-GACAACTCGAACAAGGTGCACACAAGAG---CATCTCATACAACACACATGCATTCGT
TCACGGGCGTCGTCTCGG-GGCTATACATTCGAAGCATGCATTCTCGGAACGGACCAAGTCGAAGTGGTGTAGATATACA
TGGTACATAGTCGAAGTAGTGGTACTATCGGTCCTCAACGACGGTAGTGCTAGTAGTGGTAAAAGACGACAGTAGAGGTA
CTCGCGATATTGGCAATGGTAGTTGTACACAGTTCTTAGACGTTTAAGTCATTGGTAGAGGTACTTGTCGCATCATCGTG
CGTAGTTGACCTTGGTGTATCTGTGCGTAGGGGTAC-TTGCCAAAATCCACGGGAACAGAAGTGGTACATGGTCTTCGCT
TTGTAGTCGGACTTGGCGAATCCGCGTAGTTGTACACGGTTCGTTGCACACTTGACAAATCTGGGTCTTCCAGGGTCGGT
CTTGGCGAGGGATGGTCATAGTGGTACTTGTTGGTCTCGATCAGGGCGTTCCTGGTCTTGGGGAGGTCTCCGAAAGAGAA
CTTGGCGTTCACAAGGACATGGAGCTGTGGTCTTGGCATCGGGCAGGGGATCGA--------AG--------GCCAACGA
GGGTTGCGTGTAAGAGTGTTGCAGGAGAGGCCGGAGTTGGGCGGATCCGGGCAGCAGAACCTTTCCTGGTAGTGGTGCAG
GAAGCCGGCGGTGGCTCCATGGGTGCGGCTTGAGGCGTCGGTGAAGGAGGCGGTCCTCGTGGCAGGTCGAGAAGCAGTCA
GGCGATGCGGGACGAGCACGTGTGTGAAGTAGAGGACTCCCAGCGCGGCTCAGGTGAAGCAGAGGTAGCGGTGATTAGGC
TCGAGCAGCTTGGCCCTCCGACACGGTGGGGAGAAGAGGGAGGCTGGAGT------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------
>chr2D_2
-AACGAGGAGGAACGAGCAAGCGACAACTTGGATACGGTGCAATCACGGG---CATCTCATACAACAAACATGCATTCGT
TCACGCGCGTCATCTTGGCGGTTATACCTTCAAAGCGTGCATTCAGGACGGTTCGGGT-TTGATGCGATGTAGTTGTTCA
CGGATCGTAGTCGA----------------------------CGTAGTGGAAGTAGTGGTACACGACAACGGTAGAGGTA
CTCGCGATTTTGACGACGGTAGTCGTACACGGTTCGTAGACGTTCGAGTAATCGGCAGAGGTACTTGTCGCATCATCGGG
CGTAGTCGACCTTGGCATATCCATGTGTAGGGGTAC-TTGCCAAAATCCACGGGAACAGTAGTGGTACATGGTCTTCACT
TTGTAGTCGGACTTGGCGAATCCGCATAGTTGTACACGGGTCATTGCACATTTGACGAATCTGAGTCTTTCAGGGTCGGT
CTTCGTGAGGGATGGTCGTAGCGGTACTTGTCGGTCTCGGTCAGATCATTCCTGGTCTTGAGGAGGTCCCCGAAAGAGAG
CTTGGCGTCCAAGGGGACATGGAGCTGCGGTCTTGGCGTCAGGCAGGGGATCGA--------AG--------GCCAACGA
GGGTTGTGTGTAAGAGTGCTGCAGGAGAGGCCGGAGTTGGGCGGACG------GCAAACCCATTCCCGGCAGCAGTGCGG
GAAGCCGGCGGTGGCT--------------TGAGGCGTGGGTGAAGGAGGTGGCCCCCGCGGCAGGTCGAACAGTGGCCA
GGTGATGCAGGACGAGCACGTGCGCGAAGTAGAGGGCTCCCGGCACCGCTCAGGTGAAGTAGAGGCAGCGGCAACGAGGC
TCGAGCGGCTTGGCCCTCCAGCAAGGCGGGGAGGCAAGGGAGGCCAGAGTTACGGGCGTTGGAGCCGGGGCCGGTCGATG
CTGTCCGATCGAGGACGAAGCCGGAGAAGTAGGGGCGGAGCTGAGAAGAAGCGGCTGCAACAGGAGCTTGGGGTCGGGTT
GGCCATGGCGCGGAGGATGAACCAGGTGGCCTCGGCGAGGAGGTGCGA--AGGCATGTCCGACGAGAGCCGCAGCTCGGA
CGGCGAGGCGTGGCCATGG-------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------
>chr4A_84
--------------------------------------------------------------------------------
-------TGTCGTCTCGTCAGTTATACCTTTGAAGCGTGCATTCAGGACGGTTCGAGT-TCGATGCAATGTAGTTGTTCA
CGGGTCGTAGTTGACGTAGTGGTACTATCGGTACTCGGCGACGATAGTGGAAGTAGTGGTACACAACAATGAGAGAGGTA
CTCGCGATATTGGCGACGGTAGTCGTACATGGTTCGTAGACGTTCGAGTCATTGACAGAGGTACTTGTCGCATGATTAGG
CATAGTCGACCTTGGTGTATCCGTGCGTAGGGGTACTTTGCCAAAATCCACGAGAACAGTAGTGGTACATGGTCTTCGCT
TTGTAATTGGACTGGGCGAATCTTCGTAGTTGTACACGGGTCGTTGCACACTTGACGAATCTGAGTCTTTCAAGGTCGGT
CTTGGCGAGGGATGGTCGTAGTGGTACTTGTCTTTCTCGGTCAGGGTGTTCCTGGTCTTGAGGAGGTCCCCGAAAGAGAG
CTTGGCATCCACGAGGACATGGAGCTGCGGTCTTGGCGTCGGTCAAGGGATCGAAGCCTCGAAG--------GCCAACAA
GGGATGCGTCTAAGAGTGCTGTAGGAGAGGCCGGAGTTGGGAAAACG------GCAT-CCTGTTCCTAGCAGCGGTGCGG
GAAGCCGGCGGTGGCT--------------TGAGGCATCAGTGAAGGAGGCGGCCCCCGTAGCAGGTTGAAGAGTGTACA
GGCAATGCAGGATGAGCACGTGCGAGAAGCAGAGGGCTCCCAGCGCGGCTCAGGTGATGCAGAGGCAACGATGACGAGGC
TCGAGCGGCTTGCTCACTGGCAATGGC--------------------------------TGGAGGCGGAGG---------
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--------------------------------------------------------------------------
>chr1A_174
--------------------------------------------------------------------------------
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-------------------TGGTACTATCGGTCCTCAGCGACGGTAGTGGAAGTAGTGGTACACGACAACGGTAGAGGTA
CTCGCAATATTGGCGACGGTAGTCGTACACGGATCGTAGACGTTCGAGTCATCGGTGGAGCTACTTGTCGCATCATTGGG
CATAGTCGACCTTGGCGTATCCGTGCGTAGGGGTACTT-GCCAAAATCCATGGGAACAGTAGTGGTACATGGTATTCTCT
TTGTAGTCGTACTTGGCGAATCCGTGTAGTTGTACACGGGTCGTTGCACACTTGACGAATCCGAGTCTTTCAGGGTCGGT
CTTGGTGAGGGATGGTTGTAGTGGTACTTGTCGGTCTCGGTCAGGGCGTTCCTGGTCTTGAGGAGGTCTCTGAAAGAGAA
CTTGGCATCCACAGGGACATGGAGCTGCGGTCTTGGCGTTGGGCAGGGGATCGA--------AG--------GCCAATGA
GGGTTGCGTGTAAGAGAGCTGTAGGAGAGCACAGAGTTGGACGGATCCAGGCAGCAAACCCGTTCCCGGTAGCGGTGCGG
GAAGCCGGCGGTAGCTCCATGGGCATGGCTTGAGGCATCGGTGAAGTAGGCGGCCCCCGCGGTAGGTCAAGGAGTGGTTA
GGCGATGCGGGATGAGTGTGTGGACAAAGAAGAGGGCTCCCGGTGCGGCTCAGGTGAAGCAGAGGCAGCGGTGACGAGGC
TCGAGCGGCTTGGACCTGCGGCAAGGCGGGGAGGCGAGGGAGGC------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------
>chr3D_198
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------GTAGAGGAAGTAGTGGTACACGACAACGGTAGAGGTA
CTCACAATATTGGTGATGGTAGTCGTACACGGTTCGTAGACGTTCGAGTCATCGGTAGAGGTACTTGTCGCTTCACCGGG
CGTAGTCGACCTTGGCGTATCCGTGCGTAGGGGTACT-TGCCAAAATCCACGGGAACAGTAGTGGTACATGGTCTTCGCT
TTGTAGTCGGACTTGGCGAATCCGC-------------------------------------------------------
-----------------GTAGTGGTACTTGTCAGTCTCGGTCTGGGCGTTCCTGGTCTTGAGGAGGTCCCCGAAAGAGAG
CTTGGCGTCCACAGGGACATGGAGCTGCGGTCTTGGCATCGGGCAGGGGATCGA--------AG--------GCCAACGA
GGGTTGCGTGTAAGAGTGCTGCAGGAGAGGCCGGAGTTGGGCGGACG------GCAAACCCGTTCCCGGCAGCGTTGCGG
GAAGCCGGTGGTGGGT--------------TGAGGCGTCGG--------------------GAATGTCGAAAAGCGGTCA
GGCGATGCAGGACGAGCACGTGCGCGAAGCAGAGGGCTCCCGGCGCGGCTCCGGTGAAGCAGAGGCAGCGGCGACGAGGC
TCGAGCGGCTTGGCCCTCCAGCAAGGCGGGGAGGCGAGGGAGGCCGGAGTTACGGGCGTTGGAGGCGGGGCCGGTCGATG
CTGTCCGGTCGAGGATGAAGCCAGAGAAGTAGGGGCGGAGCTGGGAAGAAGCGGCTGCAGCAGGAGCTTGGTGTCGGCTT
GGCCATGGCGTGGAGGATGAACCAGGTGGCCTCAGCGAGGAAGCGCGA--AGGCAGGGCCGACGGGAGCAGCAGCTCGGA
CGGCGAGGCGCGGCCATGG-------------------------------------------------------------
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--------------------------------------------------------------------------
>chr7B_205
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------AAGTAGTGGTACACGACAACGGTAGAGGTA
CTCACGATTTTGGCGACGGTAGTCATACACGGTTCATAGACGTTCGAGTCATTGGTAGAGGTACTTGTCACATCATCGGG
CGTAGTCGACCTTGGCATATCCGTGCGTAGGGGTACTT-GCCAAAATCCACAGGAACAGTAGTGGTACATGGTCTTCGCT
TTGTAGTCAGACTTGGCGAATCCA--------------------------------------------------------
----------------TGTAGTGGTACTTGTCGGTCTCGGTCAGGGCATTCCTGGTCTTGAGGAGGTCCCCGAAAGATAG
CTTGGCGTCCACGGGGACATGGAGCTGCGGTCTTGGCGTCGAGCAGGGGATAGA--------AG--------GCCAACGA
GGGTTGCGTGTAAGAGTGCTGCAAGAGAGGCCGGAGTTGGGCGGACG------GCAAACCCGTTCCCGGCAGCGGTGCAG
GAAGCCGGCGGTGGCT--------------TGAGGCGTCGG--------------------GCAGGTCGAAAAGTGGTCA
GGCGATGTAGGACGAGCATGTGCGTGAAGCAGAGGGATCCCGGCGCGCCTTAGGTGAAGCAGAGGCAGCGGCGACGAGGC
TCGAGCGGCTTGGCCCTTAAGCAAGGCGGGGAGGCGAGGGAGGCTGGAGTTATGGGCGTTGGAGGTGGGGCCGCTCGATG
CTGCCTGGTCGAGGACGAAGCCGGAGAAGTAGGGGCGAAGCTGGGAAGAAGCGACTACAGCAGGAGCTTGGGGTCGGGTT
GGCCATGGTGTGGAGGATGAACCAGGTGGCCTCGGCGAGGAGGCGCGA--AGGCAGGGCCGACGGGAGCAGCAGCTCGGA
CGGTGAGGCGCGGCTATGG-------------------------------------------------------------
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--------------------------------------------------------------------------
>chr6D_1105
--------------------------------------------------------------------------------
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----------------------------GCGGCGCGCGGGAGGAGCCTGGAGGGCTGCGGGATCGAGCGCCAGCTCTCTT
GCGTGCGTTGGTGGCGGCGCTATCGGGAGGGAGATGGGGATCGAGGAGAGCTGAGCAGCGTGGGGATCGGGCTAGGTTTA
GATAGGCGCCAGAGTTGGGCCTCGGTGAAGATGGGCCATCGTGGTTGGCATGCAGCGAGATGGGCT-TCTCTCTCTA-AT
CTCCCACTTCTCCTTTATTTACCAAATACAGTA-AATAACAAAA--------AAGAAAATGAGAGAAAGA-AAGGGTTGG
AGAAAG--AATTTCGGCATGGGGTTTATTTCTCTGGACTCACAAAAATATGCTTGGTCCGAGAAA-AT--AGAA-GTTGG
CACAAATGCAAGAATTAAATTCAAACTCATGTGAATTTAA-TTCAAATGGGTTTGAACTAGGTCTAGGTTTAGAAGTAA-
-CC--AAAAATGTTGAGATTTTGGGAGGAGCCTCAATAGATGGAGAAAGAATTATGGAGAAAGTTTGAAGAAC--AAACT
TGAA----GCA--AAAA--GGCATGAGAATTAAATTGCAAGTGGGTTGCGGTTAATTCCAAACTAATGGAATA-TTTATT
ATAGCTCCCTAAATATCGAGAGGATATGTTATAAAGAGAAATCACCATGTGAATTCCCTCGATTTAAATGGATC-AAAGA
TCCATGCAATTTATTTATGTGAGTTTTAGTTGGTTTGTGGAAGTG-ATAGCATGATGACATGATGCAATGCAAATGATGC
TATGAGGAATGCAACAGAG-AAATA-AAACACACGACGGAACTCAGAATCCATGGAAGGCATCTGGAGCGTCGGTCTCAG
GTCGTTACA-----------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------
>chr4A_1263
--------------------------------------------------------------------------------
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----------------------------GGCCCAAGAGGCCGGCTAGTCTGCAAGGCTG------TCTCTCTCTCTA-CT
TTTATTTCCTT------------------AGTA-AAAAACAATTAGAG--AGAAGAAAA----AGAAAGA-GAGGGTT-G
GGAAAG--AATTTGCGCATGGGGTTAATTTTTCCGGGCTCACAAAAATGAGCTTGATCAAAGAAAAAATAGAAA-GTGAG
CATGGGCGTGAAG-TTGAATTCAACCTCGATTGAATATAA-TTCAAATGAGTGTGAGAAAGAAGTGGGTATTCGGTAGGT
-CC--AAAAATGTTGAGAATTTAGGAGGAGCCTCGATAAATGGAGAAAG-ATTATGGAGAAAGTTTGGAGAAC--AAACA
TGAA----GCA--AAAA--GGCATGAGAATTAAATTGCAAGTGGGTTGCGGTTAATTCCAAACCAACGGAATA-TTTATT
ATAGCTCCCTAAATATCGAGAGGATATGTTATAAAGAGAAAACACCATGTGAATTCCCTCGAGTTAAATAGATCGAAGGA
TCTATGCAATTTATTTAATTGAGTTTTAAA----------AAGGG-GTTGCATGATGACATGATGCAATGCAAATGATGA
CATGATGAAATG--CAACAAACAAATAAACACACATCGGTCA-CGCAAAACATGGAAGGTGTCTTGAGTGTCACTCTCGG
GTCGTCACA-----------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------
>chr4A_1263
--------------------------------------------------------------------------------
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----------------------------GGCCCAAGAGGCCGGCTGGGCTGCAAGGCTG------TCTCTCTCTCTA-CT
CTTATTTCCTTT-----------------AGGA-GAAAAGAATTAGAG--AGAAGAAAA----AGAAAGA-AAGGGTTAG
GGAAAG--AATTTGCGCATGGGTTTAATTTTCCCGGGCTCACAAAAATGAGCTCGATCCAAGAAAAAATAGAAA-GTAAG
CATGGGTGTGAAG-CTAAATTCAACCTCATTTGAATTTAA-TTCAAATGAGTGTGAGAAAGAAGTGGGTATTAGGTAGGT
-CC--AAAAATGTTGAGAATTTAGGAGGAGCCTCGATAAATGGAGAAAG-AATTATGGAGAAAGTTTGGAGAACAAAC--
--AT----GAAGCAAAA--GGCATGAGAATTCAATTGCAAGTGGGTTGCGGTTAGTTCCAAACTAACGGAATA-TTTATG
ATACCTCCTTAAATATCAAGAGGATATGTTATAAAGAGAAATCACCATGTGAATTCCCTCGAGTTAAATAGATCGAAAGA
TCTATGCAATTTATTTAATTGAGTTTTAAA----------AAGGG-GTTGCATGATGACATGATGGAATGCAAATGACGA
CATCATGAAATT--CAACAAAAAAA-AAACACACATCGGTCA-CGCAAAACATGGAAGGCATCTGGAGCGTCGGCCTCGG
GTTGTCACA-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------
>chr6D_1290
GCTGGCTGTG----------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------CTCTCTCTCTCCCT
CATATTTTCTTT-----------------AGCA-GAAAAGAATTAAAG--AGAAGGAAA----AGAAAGA-GAGGGTT-A
GGAAAAAAAATTTGCGCATGCGGATAATTTTCCCGGACTCATAAAAATGAGCTTGATCCAAGAAA-AATAGAAA-GTGAG
CATGCACGTGAAG-TTGAATTCAACCTCATTTGAATTTAA-TTCAAATGAGTGTGAGAAAGAAGTGAGTATTCGGTAGGT
-CC--AA-AATGTTGAGAATTTAGGAAGAGCCTCGATAAATGGAGAAAA-AATCATGGAAAAAGTTTGGAGAACAAAC--
--AT----GAAGTAAAA--GACATGAGAATTAAATTGCAAGTGGGTTGCGGTTAATTCCAAACTAATGGAATA-TTTATT
ATAGCTCCCTAAATATCGAGAGGATATGTTATAAAGAGAAATCATCATGTGAACTCCTTCGATTTAAATGGATC-GAAGA
TCCACACGATTTATTTATTTGAGTTTTAAA----------AAAGG-G-TGCATGATAACATGATGCAATGCACATGATGC
AAAGATGAATGCAACGAACAAAACA-AATCACACGACGAAACTCGGAATACATAGAAGGCGTCTGAAGCGTTGGTCTCAG
GTCGTTACA-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------
>chr4D_1299
CTCTCT--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------------------------------TCTCTCTCCCT
CTTGTTTTTTAAA------------------GA-GAAAAGCATTAGAG--AGAAGAAAA----AGGAAGAGGAGGTTTAG
GGAAAG--AATTTGAGCACGCGGCCAATTTTCCTGGAGTCATAAAAATAAGCTTGATCCAAGAAG--ATAGAAA-GTGGG
CATGGATGTGAAG-TTGAATTCAACCTCATTTGAATTTAAATTCAAATGA--GTGAGAAAGAAGTGGGTATTCGGTAGGT
-CCAAAA-AATGTTGAGAATTTAGGAGGAGCCTCGATAAATGGAGAAAG-AATTATGTAGAAAGTTTGGAGAACAAAC--
--AT----GAAGCAAAA--GGCATGGGAATGAAATTGCAAGTGGGTTGCGATTAATTCCAAACTA-TGGAATA-TTTATA
GTGGCTCCCTAAATATCGAGAGGATATGTTATAAAGAGAAATCACCATGTGAATTCCCTCAATTTAAATGGATC-GAAGA
TCCATACGATTTATTTAGTTCAGTTTTAAA----------AAGG--GTTGCATGATGACATGATGCAATGAAAATGATGC
AATGATGAATGCAACAAACAAAACA-AATCACAGGACGAAACTCGGAAAACATGGAAGGCGTCTGGAGCGTCGGTCTTGG
GTCGTCACA-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------
>chr7B_1301
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------------------------------CTCTCTCCCTT-CT
CTTATTTTCCCT-----------------AGCA-GAAAATTATTAGAG--AGAAGAAAA----AG-AAGA-GAGGGTTCG
GGAAAG--AATTTGCGCATGCGGACAATTTTCCCGGACTCATAAAAATGAGCTTGATCCAAGAAA-ACTAGAAA-GTGAG
CATGGGCGTGAAG-TTGAATTCAAACTCATTTGAATTTAA-TTCAAATGAGTGTAGGAAGGAAGTGGGTATTTGGTAGAT
CCA--AA-TATGTTGAGAATTTAGAAAGAGCCTCGATAGATGGTAAAAG-AATTATAGGAAAGGTTAGGGTGTCAAAACT
CGAA----GAAGGAAAG--GCCAAGGGATTTGACATGCACGTGTGTTGTGGTAAATTCCAAATTAATGGAATA-TTTATA
ATAGCTCCATAAACATTAGGAGGATATGTTATAAAGAGAAATCACCATGTGAATTCCCTCGATTTAAATAGATC-AACGA
TCTATGCAATTTATTTAGGTGAGTTGTAAA----------AAGGG-GTTGCATGATGACATGATGCAATGCAGATGATGC
AAGGATGAATGCAACGAACAAAACA-AATCACACGAGGAATCTCGGAATACAAGGAAGGCATCTGGAGCGTCGGTCTCGG
GGCGTTACA-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------
>chr7B_1301
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------------------------------CTCTCTCCCTT-CT
CTTATTTTCCCT-----------------AGTA-GAAAATTATTAGAG--AGAAGAAAA----AG-GAGA-GAGGGTTCG
GGAAAG--AATTTGCGCATGCGGACAATTTTCCCGGACTCATAAAAATGAGCTTGATCCAAGAAA-ACTAGAAA-GTGAG
CATGGGCATGAAG-TTGAATTCAAACTCATTTTAATTTAA-TTCAAATGAGTGTAGGAAGGAAGTGGGTATTTGGTAGAT
CCA--AA-TATGTTGAGAATTTAGAAAGAGCCTCGATAGATGGGAAAAG-AATTATAGGCAAGGTTAGGGTGTCAAAA--
--CTCGAAGAAGGAAAG--GCCAAGGGATTAATCATGCACGTGTGTTGCGGTAAATTCCAAATTAATGGAATA-TTTATA
ATAGATCCATAAATATTAGGAGGATATGTTATAAAGAGAAATCACCATATGAATTCCCTCGATTTAAATAGATC-AACGA
TCTATGCAATTTATTTAGGTGAGTTTTAAA----------AAGGG-GTTGCATGATGACATGATGCAATGCACATGATGC
AAGGATGAATGCAACGAACAAAACA-AATCACACGATGAATCTCGGAATACAAGGAAGGCATCTGGAGCATCGGTCTCGG
GGCGTTACA-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------
>chr2B_1322
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------CTTT-----------------AGCAGAAAAGAAATTAGAG--GGAAGAAAA----AGAAAGA-GAGGGTTAG
GGAAAG--AATTTGTGCATGCGGACAATTTTCCCGGACTCATAAAAATGAGCTTGATCCAAGAAA-AATAGAAA-GTGAG
CATGGGCGTGAAG-TTGAATTCAAACTCATTTGAATTTAA-TTCAAATGAGTGTAGGAAGGAAGTGGGTATTTGGTAGA-
CCC--AA-AATGTTGAGAATTTTGGAAGAGCCTCGATAAATGAGATAAG-AATTGTTGGCAAAGTTTGGTGACCAAAC--
--TA----GAAGTAGAAAGGGCATGGGAATT---TTGCAAATGTGTTACGGTTAATTCCAAGCTAATGGAATATTTTATA
GTAGCTCCCTAAATATTGGGAGGATATGTTGTAAAGAGAAATCGCCATTTGAATTCCCTTGATTTAAATAGATC-AACGA
TCTATACAATTTATTTAGGTGAGTTTTAAA----------AAGG--GTTGCATGAAGACATGATGCAATGCAAATGATGC
AACGATGAATGCAACAAGCAAAACA-AA-CACGCGTCGAAACTCAGAATAGCTGGAAGTCTTCTGGAGCATCGGTCTCGG
GGCGTTACA-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------
>chr4D_1331
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------AAAAGCATTAGAG--AGAAGAAAA----AGGAAGAGGAGGTTTAG
GGAAAG--AATTTGAGCACGCGGAGAATTTTCCTGGACTCATAAAAATAAGCTTGACCCAAGAAA-AT--AGAAAGTTGG
CATGGGCGTGAAG-TTGAGTTCAACCTCATTTGAATTTAA-TTCAAATTAGTG--AGAAAGAAGTGGGTATTCGGTAGGT
-CCAAAA-AATGTTGAGAATTTTGGAGGAGCCTCGATAAATGGAGTAAG-AATTATAGAGAAAGTTTGGAGAACAAAC--
--AT----GAAGCAAAA--GGCATGAGAATGAAATTGCAAGTGGGTTGCAGTTAATTCCAAACTAATGGAATA-TTTATA
GTAGCTCCCTAAATATCGATAGGATATGTTATAAAGAGAAATCACCAAGTGAGTTCCCTCGATTTAAATGGATC-GAAGA
TCCATACGATTTATTTAGTTGAGTTTTAAA----------AAGG--GTTGCATGATGACATGATGCAATGCAAATGATGC
AATGATGAATGCAACAAACAAAACA-AATCACACGATGAAACTCGGAAAACATGGAAGGCGTCTGGAGCGTCGGTCTCGG
GTCGTCACAACCATC-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------
>chr7D_1331
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------AAAAGCAATGAAAGAAGAGG-AAA----GAAAAGA-AACGGGTGG
ACAAAG--AATTTGGGCATGGGAACTATTTTCCCGGACTCACGAAAATGAGCTTGATCCAAGAAA-AT--GGAA-GTGAG
CGTGTGTGTGAAG-TTGAATTCAACCTCATTTGAATTTAA-TTCGAATGAGTGTGAGAAAGAAGTGTGTATTCGGTTGGT
CCA--AA-AATGTTGAGAATTTAGGAGGAGCCTCGATAAATGGAGAAAG-AATTATGGATAAAGTTTGGAGAGCAAAC--
--AT----GAAGCAAAA--GGCATGAGAATTAAATTGCAAGTGGGTTGCGGTTAATTCCAAACTAATGTAATA-TTTATA
GTAGCTCCCTAAATATCGAGAGGATATGTTATAAAGAGAAATCACGATGTGAATTCCCTCAAGTTAAATAGGTCGAAAGA
TCTATGCAATTTATTTAATTGAGTTTTAAA----------AAGGGAGTTGCATGATGACATGATGCAATGCAAAATATGC
AATGATCAAGGCAACAAATAAAACA-AATCACACGACGAAACTCGAAAAACATGGAAGGCGTATGGAGCGTCGGTCTCGG
GTCGTTACA-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------
>SNPs
---------------S----S--------------------S-------S------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------S------------------------------
--S-----------------------------------------------------------------------------
----S---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------S----------------
--------------------------------------------------------------------------------
------S---------------------------------------------------S--S-----------------S
------------------------------------------S---------S----------------S----------
-----S---------------------------------S----------------------------------------
S--------------------------------------------------S--------S-------------------
--------------------------SS-------------------SSS--------------------S------S--
----S--------------SSSSSSSSS---S---------S-----------------S----------S------S--
--S--------------------------------------S----------------------------------S---
---------SSS----------S--SSS-------------S-----------------SSSSS----------------
----------------------------------S---------------------------------------------
--------------------------------------------------S-----------------------------
-------------------S------------------------------------------------------S-----
-----------------------------------------S-------------S--S--S---------S--------
---------S-----------S--SS------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------S-------S------------------------------------------S---------S-------S----
---------S-----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_870
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------CAAGTGAAGCAGAGGCAGCA----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------
>reverse_2193
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------AAGTACGGGCCTTCTTGAGC----------------------------
--------------------------------------------------------------------------
