>input_sequence_86847
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-------------ATGGCTTCTCCCGCTCTCAAATTCGCCGCCGTCATGCTCCTGGCCGCCCTCTGCGCCACCGCGCTAG
CCCCGGCCATATCGGGGCAGCCGACGGATGACGGGCTAGCGACGTGCATCGCACGCTGTGGGTGTGTGCCCTGCCCGAAA
GGGAAGTTCTGCCCCACTGTGTGCACGACCCCGCCTGCCTGCAAGGCCAAATGCGAGTCCCAGTAG--------------
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-----------------------------------
>chr7D_1_TraesCS7D01G058600
ACGGCCACAACCTT------------------------------------------------------------------
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------------------------------------------------CATGACCGCATCCAGATGAGCACGTGATAGAA
AGGGCCCAGGACCAAGAGTTCCGCTGCCGCCATGCCCACGACCTTCATGACCGCATCTAGATTAGCACGGGGAGGAAGGG
CAAAGGAGCAAATGTTCCGGTGACGCCGACCACCAACCAGAGCTTTGCCCGGACGACAACTGCCGACAATGGCGAGGGAG
AAAGGCGGCGAGGAAGGGCCCTCGGCAGCGGTGGTGGCGATCCACCCGAGTCGCCCAATGGGACGACGC-GGGCCGCTAG
TAAGATGCGT-TTTTTCACTATGCTAAATGAATTGAACCACTATTACCTAGTCTGAACATTTGTGAACAGGATTGCTTCG
GATTTGTGCATCGCGTTTTGACTCGGCCGGTACAATATACATGTATGAACGCATGCAGCACAGCCTAGGT---TCAAGAA
AAAACAAGAGAAGGTCAAAGAAGGTGCGCTGTTAGCTAAAAGTCAAATGACGAGGGACGGAGGCACGGAGCCCGAGCTAA
AAAGATAAGATCCGATGCGATCGATGCTCTTCCAGTCAACAATGTATTGTGAGGTCTCCTGTGGATATAAGAATGTAACG
TAAGTCAAAAAACCGTGGTGCAAAATTCAAACTACACTACATGGAGCTTCATTCATTAATCAACTACTAGTACTACTTAT
AACCTATAGATAGCCTGGGTTCAAGGAAACAGAAGAGAACGTCAAAGAAGTTGTGCTGTTAGCTAAAAGTCAAATGACGA
GGGTTGGACCTC--------------------------------------------------------------------
--GAGCTAACACCGTCCGATCAGATCGATCCTCTTCCAGTCAACAATGTATCGTAAGGTCTCCACTCAAGATAAGCATGT
AACGTGAAGTCAATACTACATGGTGCACAATTCAAA-CTACATGATGCTTCCTTATTCA-TCTATACTGCTA----TAGC
CTATAAATAGCGTCCCCGGCTCCTGTCTGATC------AACCCA--------AAAGCATACCCCATCTCCTCTCCTCTC-
---CCCTCATCTCATGGCTTCTCCCGCTCTCAAATTCGCCGCCGTCATGCTCCTGGCCGCCCTCTGCGCCACCGCGCTAG
CCCCGGCCATATCGGGGCAGCCGACGGATGACGGGCTAGCGACGTGCATCGCACGCTGTGGGTGTGTGCCCTGCCCGAAA
GGGAAGTTCTGCCCCACTGTGTGCACGACCCCGCCTGCCTGCAAGGCCAAATGCGAGTCCCAGTAGTCCGGCGCGGGCTG
GTAGGCC-GGCTGCGA-CCTGGCGACGCCCCCTGCGCCCGCCGCTGCTGCGACCGTGAGCAAGCCTGCGAGCGCATGATG
CTGAAGC----------------CAACACTGTA-----------------------------------------------
-----------------------------------------------------------------TTGTAAGCCCTGTAT
GTCTGGATGTATT----------GTGTGTGTCTGTGCTGTGATGTGGTAATAAAATGTCAACGGATCGATCCATGAGACA
AAAATAAATATATGGAAATGTTATCTTCGTTCCACAGTGTATATTACGTTCATCATAGTCAAATTTCAGAGCAAGTATAC
TCG-AAACATATA--------TTGACCTATATAATACCAAATAAATATAGTATAAAAATATGTTTCATGTGGATCTAATG
GTTGATTTGGTATTGGAAATAATGATTATTTGGTAAACTTGGTCAAAGGTCAAACTTAACTATGTTTGACTTGGGTCAAT
ATGAATATGCATTATGTTTCAAAATC---AGGAGATTATTTTAGGATGGTAACATCATAGCTTTTATGAAAAACGGGATT
GCTAAATCTCAGTCGACTGTGACTTAATCAATTCTCAGTCGATTCTATATCCACGGGATCTTACGTGGAAACCTGTCCAA
AATTATCTTCTT--------TTTTTTACATCTTACGTCACTTGACACAGAATTGGTTAAATCTCAATCGACTAAGACCTA
GCCACACCCTATGAAAAACGA-TAGCCGACACGAATTACATTCACAAAGTAACTGTTTTCAAGGGACAC-------CATC
CTTTGAAGGAGAGGGATCGTCGTCTGGCATGTCGAAAGTAGCATGAGCATAATAAAGTCTGGGTACGAGTACCTCGGGAC
CTAAGGGTGTCCGAA-CATCAGCCTGAACTAGATAAAAAGCTTAGGATAGGATGAGGATCACAAATCTTATGATGTTAGC
TAATCGGTCAAAATTGTAAGGCAGAGAAGCTAGCTGCCCGATAAAACCACCTGATTAGGAAAATATGGATCACCACCTCG
CCATCCAAGAGCGACGCGGCGGCGATCCGATCCGG
>chr7D_5
----CCACAACCTT------------------------------------------------------------------
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------------------------------------------------CACGACCTCATCCAGATCAGCACGTGGCAGAA
AGGGCCCATGACCCAGAGTTCCGCCGCCGCCACGCCCACGACCTTCATGCCCGCATCCAGATCAGCACCGGGAGGAAGAG
CCAAGGAAGAAGAGTTACGGCGCCGCCGACCATCGACCGGAGATTTGACCGGACGACAACTGCTGATGACGGTAAGGGAG
AAAGAGCGTGAGGAGGGCCCTG-AGCCGCGGCGGTGGCGAGCCACCCGATTCGCTCGATGGGACGACGTGGGGCCGCTAG
CTTGATGCGTTTTTTTCACTATGCTAAACGAATTGAACCACTATTGCCTAGTCTGAACATTTGTGAACAGGATTGCTTCG
GATTTGTACATCGTGTTTTGACTCGGCCGGTACAATATACATGTATGAACACATGCAGTACAGCCTGGGT---TCAAGGA
AAAAGAAGAGAACGTCAAAGAAGGTGTGCTGTTAGCTAAAAGTCAAATGACGAGGGTT----------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----GAACTAAAGAGCATACATTGTATCGTGAGAAGGTGCGCTGTATTTATACGCTATACATTGTTGACCCGAAAAGCA
TTGATCCGATCCGATCCGATCCAATCGATGCTCT-----TCAACAATGTATCGTGAGGTATCCTCTGGATATAAGTATGT
AACGG-AAGTCAATACAACGTGGTGCAAAAGTTAAA-CTACATGGAGCTTCATTAATCA-ACTACTACTA------TAGC
CTATAAGTAGCGTCCCCGCCTCCCGTCTGATC------AACCCA--------AAGCATA---CCATCTTCTCTCCTCTC-
---CTTTCATC-CATGGCTTCTCCCGCTCTCAAATTCGCCGCCATCATGCTCCTGGCCGCCCTCTGCGCTGCCGCGCTGG
CCC-GGCCACATCGGCGCAGCCGACGGATGACGGGCTAGCGACGTGCATCACGCGCTGTGGGTGTGTGCCCTGCCCGAAA
GGGAAGTTCTGCCCCGCTGTGTGCACGACCCCGCCTGCCTGCAAGGCCAAATGCGAGTCCCCGTAGTCCGGCGTGGGCTG
GTAGGCC-GGCTGCGA-CCTGGCGACGCCCCCTGCGCCCGCCGCTGCTGCGACCGTGAGCAAGCTTGCGAGCGCATGATG
CTGAAGC----------------CAACACTGTA-----------------------------------------------
-----------------------------------------------------------------TTGTAAGCCCTGTAT
GTCTGCATGTATT----------GTGCGTGTCTGTGCTGTGATGTGGTAATAAAATGTCAACGGATCGATCCGTGAGACA
AAAATAAATAAATAGAAATGTTAT-------------------TTATTTTTGTCACAGTCAAACTTCAGAGCAAGTATAT
TGG-AAACATATATCAATTTATCAACCGATACAATACCAAATAAATACAGTATAAAA-TATGTTTTATCTGGATTTAAGG
ATTGATTTGGTATTGTGAATAAAGATCTTTCTT-----TTGGTCAAAGGTGGAAGCTAAATATGTTTGACTTG-------
--------------------------------------------------------------------------------
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-----------------------------------
>chr4A_10
CGATCCTCTGCACGTCAACTGTATATCGTGAGTTATCCTCTCGAGATCAGCATGTAACTTGAAGTCAATATTACACGGTG
CGCAATTCAATCTACGTGATGGTTAATCAACTACTACTAGCCTATAAATAGCGTCTCGGCCTCCCATCTAATCATCCCAA
ACCCAAAGCATACCATCTCCTCTCCTCTCACTACTTTCATCTCATGGCTGCTCCGGCTCTCAAGTTCGCCGCCGTCATGC
TCCTGGCCGCCCTCTGCGCGGCCGCGCTGGCCCCGGCCGCGTCGGGGCAGCCCACAGACGCGCTAGCAACGTGCATCGGG
CGCTGCGGGTGTGTGCCCTGCCCAAAAGGGAAGGTCTGCATCCTTGTGTGCACACCCCCGCCGCCCTGCGCAGCCAGATG
CCGCTGCACCTATTCCGGCACGGGCTGCTAGGCGGCACCGTCCATCAGGAAGCCTGGCAGCGCAAGCGCTGTAGCGAGCA
GCTAGCTCATACTCCCTCCGTTCCTAAATATAAGTCTTTATAAAGATTCCACTAGGTGAACTACATACGAAGCAAAATAA
ATGAATCTAAACTTAAAATGCATCTATATACATCCGTATGCGGTTTATAGTGAAATCTTTACAAAGACTTACATTTAGGA
ACGGAGGGAGGACGTTCTACTGTGTATTGTACGCCCTGTCTGTCCATGCATGCATGCATGTTTCATGCGTGCGTCTGTGT
GCTGTGATTTTTGGTAATAAAGTGTACAATCCGTGAGACTAATAAATAAATAGAAATGTCATTTTCGTTCCACAGTGTAT
ATTACCTTTATCAGTCAAACTTCAGAGCCAATATGATGGAAACTATATCAACCTATGTAATACCAAATAAATATGGTATA
AAATATGTTTTATGTGTATCTAATGGTTGATTTGGTACTGTTAATAATGATTTTTTTGTAAACTTTGTCACAGGTATGCA
TTATATTTTAAAAAAGTGAAGTGATAATCTTCCGATGCTAACATACTAGCTTTTTGAAAAACCGCTACCCGGAACGGATT
ACGTTTCATGAAGTAACTGTGTTGGAGGTCCTCCATCATTCAAAGCAAGGGTTCATCTGTCACTCAAAGTGCGGTTGGGG
AAGCCAAACATGTCGCAGAGGCGCTGCAGAGTTACCTGTAGGGAGTGCCATTGATGGTGAAGCGGCTATGTTGCACCGCT
CAAATATCGACAGCACCCTCGATAGTTGCGACGAACTCATGGGTGATCTCTTTATATGTCGTGGTGTGCAGCTGAGTGAA
CACACCCATGCAAGCGTTGTTCGCCATCCAGTTGAAGTTGGCGATAAGTTCCTACAGATAGGAATGTACCTCCACCATGT
GTGCAGCTCCTGGCGTACACTCTGCTTGTGGTAGTGCTGGTTCACCTCCGCACTGAGCGAGATGCACTTGCTCCTGAACG
CTTTGGGACCACATGCCTACTTGCTAACAAGTAGTAATAAATTTGACTTTAGAAATTAAAAAACATAGACAAAGGCTCGA
TTTTATTACCTCGAAATAAAGCATCCAGACGATACATACACAATGAGCACACACCCGGCTTTTTCATAGCTAGGCTACAC
ATAACCAACATCAATGCACACATACAGAAAACACGCCGTCAAATAGCAAAGTCACACAGGACCAAAACTATGGATAGACA
AGAAAAAAGAACCCAAAGCGAACAAATCTGCAATGTGCCGACTTCAAATCCGCACCAACCATTTCATGACACCGCACGAA
CGATGAGAAAAGAAGCAACACTCAAAACACCACCATCGTCGGATGCAACCACCCAAGGCCAAAATCTAGGTTTTCCACTT
AATGAACCAATCCAAGCGTATCCGAGGAATGCCTTCAACAAGGTAACGATGTAAAAATATCCCATTGCCAAGTATAACCA
ACTTGGGTCAGGCCTAGGCTTTCACCCCAGAACTCGAGATCGGGTGCTCCATTGACACCACCATTGACGTTAGTCATGTG
TTACCGCCACCACTTTTCCGTGACCTAGCAGCTACATGCGATGTGCAACCGTCATCGCTGCCCAACCATCCCTCTGCATT
AAGCCGTTGTCCATAGTCTGCATCTTATTGTCTAAATCATTGTGGATCTAAAGGGAGAAACCCTCAGGAAGACCTTTTAG
TGGCCACTGCAATCCGCAATAAGACGGATGACGCCGCAATAAAGCGGTGGCCATAGGCCGAAGTGGTCACCTCAACGGGC
TAATCTAGGTGACGAACCAGCCACTCCAACATCCCAACCCCAAACCGGTTGGATCAGGACGACGGGTATCATCGCAAGCA
ACAACAATAATCACCACGCCCCTGATCGAGCCCCGCCAACATCGGTTGTCAGAACCACCATCCCGTGCCTTTCTCCGCCT
TAGCAGCACGACCACCAGGTGAGGCGGCGCAGAACAAGACGCAGAGCAGCGCTCAGCCACCAGTCTGCGGCTGTTCGCCA
GGAAGTACGACCGTCGGTGCAATCGACACCGGCATCCATTGCCACCTTCATGACCGCATCCAGATGAGCACGTGGTGAAA
AGGGCCCACGACCAAGAATTGCGCTGCCGTCATTCCCCCGACCTTCATGACCGCATCTAGGTCAGCACGGGGCAGAAGGG
CCAAGGAGCAAGAGTTCCTGCGCCGCCGACCACCGACCAGAGTTTTGCCCGGAAGGCAACTGCAACA----GCGAGGGAG
AAAGGGGGCGAGGAAGGGCCCTCAGCAGCGGTGGCGGCGAGCCACCCGAGTCGACCGATGGGATTACAC-GGGCCGCTAG
CAAGATGCGG-TTTTTCACTATGCTAAATGAAT--------------------TGAACATTTGTGAACAGGATTGCTTTG
GATTTGTACATGGGGTTATGACTTGGCCGCTACAATATAGATGTATGAACGCATGCAGTACAGCCTGGGT---TCAAGAA
AAAACAAGAGAAGGTCAAAGAAGGTGTGCTGTTAGCTAAAAGTCAAATGACGAGGGTT----------------------
--------------------------------------------------------------------------------
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-----GAACTAAAGAGCATACAATGTATCGTGAGAAGGTGCGCTGTATTTATAGGCTATACATTGTTGACCCAAAAAGCA
TCGATCTGATCCGATCCGATCCGATGGATGCTCTTCCAGTCAACAATGTATCGATCGTG---------------------
-------------------ATGGTGCACAATTCAAA-CTACATGATGCTTCCTTATTCA-TCTACAACATACTACTTAGC
CTATAAATAGCGTCTCCGGCTCCCGTCGGATC------AACCCA--------AAGCATA---CTATCTCATCTCCTCTC-
---CTTTCATCTCATGGCTTCTCCCGCTGTCAAATTCGCCGCCGTCGTGCTCCTGGCCGCCCTCTGTGCCACGGCGCTGG
CCCCGGGCATATCGGGGCAGCCGACTGATGACGGGCTAGCAATGTGCATCGCGCGCTGCGGGTGTGTGCCCTGCCCGAAA
GGGAGGTTCTGCCCCGCCGTGTGCACGACCCCGCCTGCCTGCAAGGCCAAATGCGAGTCCGGCTAGTCCGGCGCGGGCTG
GTAGGCC-GGCTGCGA-CTTGACGAC-------GCGCCCGCTGCTGCTGTGTCCGTCAGGAAGCCTGCGAGCGCATGATG
CTGAAGC----------------CAACAGTGTA-----------------------------------------------
-----------------------------------------------------------------TTCTAAGCTATGTCT
GTCTTT--------------------TGCGTGTGTGCTGTGCTGTGGTAATAAAATGTGAATGGATTGATCCGTGAGACA
AAAATAA-TAAATATAAATATTATCTTCGTTTCACAGCGTATATTA----------------------------------
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-----------------------------------
>chr4A_327
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------------------------------------------ATTGCCTGGTCTGAACGTTTGTGAACCGGATTGCTTGG
GATTTCTACATTCCATTTTGACACGGCCGGTAGAATATACATGTATGAACACATGCAGTACAGCCTGGGTTCATCAAGAA
AAAACAAGAGAAGGTCAAAGAAGGTGTGCTGGTAGCTACAAGTCAAATGAAGAGGGTC----------------------
--------------------------------------------------------------------------------
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-----GGACCTC--------------------------------------------------------------------
--GAGCTAACATGATCCGATCCGATCGATCCTCTTCCAGTCAACAATTTATCGTGAGGTGTCATCTCGAGATAACCATGT
AACGT-AAGTCAATACAACGTGGTGCAGAAGTCAAA-CTACATGGTGCTTCATTATTCA-ACTAC-----------TAGC
CTATAAATAGCATCCTCGGCTCCCGTCTAATC------AACCCAGAAGGCAGAAGCATA---CCACCTCCTCTCCTCTC-
---CTTTCATCTCATGGCTGCTCCCGCTCTCAAGTTCGCCGTCGTCATGCTTCTGGCCGCCCTCTGCGCCGCCGCGCTGG
CCCCGGCCACATCGGGGCAGCCCACTGATGACGGGCTAGCCACGTGCATCGACCGCTGCGGGTGTGTGCCCTGCCCGGAA
GGGAAGTTCTGCCCCGCCGTGTGCACGACCCCGCCGGCCTGCAAGGCCACATGCGAGTGCACCTACTCCGGCGTGGGCTG
CTAGGCCCGGCTGCGA-ACTGGCGACGCCACATGCGCCCGCCGCCGCTGCGTCTGTCAG---------------------
----AGC----------------CAACACTATATTGTACTACTTTCATTCGAAGTTACTTGTCGAAAAAATGAATGTATC
TAGATGGTTTTTAGTTGTAGACACGTGCATTTTTGTGACAAGTAATTCCGAACGGAGGGAGTAACTTGTAAGCCCTTTAT
GTCTGCATGTATT----------GTGCGTGTCTGTGCTGTGATGTGCTAATAAAATGTCAACGGATCGATCCATGAGACA
AAAATAAATATATGGAAATGTTATCTTCGTTCCACAGTGTATATTACTTTCATCATAGTCAAATTTCAGAGCAAGTATAC
TCG-AAACGTATA--------TTGACCTATAAAATACCAAATAAATATAGTATAAAAATATCTTTTATGTGGATCTAATG
GTTGATTTCGTATTGTCAATAATGATT-GTTTGTAAACTTGGTCAAAGGTCAAACTTAACTATGTTTGACATGGGTCAAA
CTGAATGTGCATTATATTTCAAAATC---AGGAGATTATTTCAGGATGGTAACATCCTAGC-TTTATGAAGAACGGGATG
GCTAAATCTCAGTCGACTAAGACTTAACCAAGTCTCAGTCGATTCTATATCCTCGGGATCTTACGTGGAGACCTGTCCAA
AATTTTCTATATAGTTTTTCTTTTCTACATGTTATGTCACTTGACTTAAACTTAGTTAAATCTCAGTCGACTAAGACCTA
GCCACACCCTATGAAAAATCGGTAGCCTACACGAATTACGTTCACGAAGTTACAGCTTTCAGGAGACACCATCCTTCATC
CTTTGAAGGAGAGAGATAGTCCTCTGGCATGTCGAAAGTAGAATGAGCATACTAAAGTCTGGCTACGAGTACCGCGGGAC
CTAAGGGTATCCGAACCATCAGCCTGAACTAGATAAAAAATTAGGAT---------------------------------
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-----------------------------------
>chr4A_385
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--------------------ACTTGGCTGGTACAATATACATGTATGAACGCATGCAGTACAGCCTGGGT---TCAAGAA
AAAACAAGAGAAGGTCAAAGAAGGTGTGCTGTTAGCTAAAAGTCAAATGACGAGGCGTGAAGCA----------------
--------------------------------------------------------------------------------
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---------------------AGAACGATCCTGTGCACGTCAAAA---TATCGTGCGTTACCCAC-CGAGATCAGCATGT
AACTTGAAGTCAATATTACATGGTGCGCAATTCAAT-CTACGTGATGGTTAATCAAC--TACGTTA--------------
-----------GTCTCGGCCTCCCATCTAATCATCCCAAACCCA--------AAGCATA---CCATCTCCTCTCCTCTCA
CTACTTTCATCTCATGGCTGCTCCGGCTCTCAAGTTCGCCGCCGTCATGCTCCTGGCCGCCCTCTGCGCGGCCGCGCTGG
CCCCGGCCGCGTCGGGGCAGCCGACGGATGC---GCTAGCAACATGCATCGGGCGCTGCGGGTGTGTGCCCTGCCCGAAA
GGGAAGGTCTGCATCCTTGTGTGCACACCGCCGCCGCCCTGCGAAGCCAGATGCCGCTGCATCTATTCCGGCACGGGCTG
CTAGGTG-AGCTGCGACCCTCGCGACTCCGCCTGCACACGCCACGGCACCGTCCGTCAGGAAGCCTGGCAGCGCAAGC-G
CTGAAGC----------------CAGCA----------------------------------------------------
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>chr7D_693
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-----------AGCCTGGGTTCAACGAAAAAGAAAAGAACGTCAAAGAAGGTGTGCTGTTAGTTAAAAGTCAAATGACGA
GTTCTGGAGCCC--------------------------------------------------------------------
--GAGCCAATACGATCCAATCCGATCGATCCTCTTCCAGTCAACAATGTATCGTGAGGTATCCTCTGGAGATAAGCATGT
AACGT-ACGTCAATAGTACATGGTGCAAAAGTCAAAACTACGTGAAGCTTCATTAATCTTACTAC-----------TAGC
CTATAAATAGCGTGTCCGTCTCCCGTCTGATCATCCCAAACCCA--------AAGCATA---GCATCTCCTCTCGTCTT-
---CTCTCATCTCATGGCTGCTCCCGCTCTCAAGTTCGCCGCCGTCGTGCTGCTGGCCGCCCTCTGCGCCGCCGCGCTGG
CCCCGGCCACATCGGGGCAGCCGACTGATGATGGGCTAGCGACTTGCATCGACCGCTGCGGGTGTGTGCCCTGCCCGGAA
GGGAAGTTCTGCCCCGCCGTGTGCACGACCCCGCCGGCCTGCAAGGCCACATGCGAGTGCACCTATTCCGGCGTGGGCTG
CTAGGCCCGGCTGCGA-ACTGGCGACACCGCATGCGCCCGCCGCCGCGGCGTCCCTCAGGAAGCCTGCGAGCGCATGATG
CTGAAGC----------------CCACACTGTA-----------------------------------------------
-----------------------------------------------------------------TTGTAAGCCCTGTAT
GTCTGCATGTATT----------GTGCGTGCGTGTGCTATGATGTGGTAATAAAATGTGAACGGATCGATCCTTGAGACA
AAAATAAATAAATAGAAATGTTATCTTTGTTCCA--GTATATATTACTTTTATCATAGTCAAATTCCAGAGCAAGTATAC
TCG-AAACATATA--------TTGACCGATAGAATACCAAATAAATATAGTATAAAAATATCTTTTATGTGGATCTAATG
GTTGATTTGGTATTGTCAATAATGATT-GTTTGTAAACTTGGTCAAAGGTCAAACTTAACTATGTTTGACTTGGGTCAAA
ATGAATATGCATTATATTTCAAAATC---AGGAGATTATTTCAGGATGGTAACATCCTAGC-TTTATGAAGTACGGGATT
GCTAAATCTCGGTCGAGTGAGACTTAACCAAGTCTCAGTTGATTCTATATCCACGGGATCTTACGTGGAGACCCGTCCAA
AATTTTCTATTTAGCTTTTCTTTTTTACATGTTATGTCACTTGACTTAAACTTAGTTAAATCTTAGTCGACTAAGACCAA
GCCACACCCTATGAAAAAACGGTAGCCTACACGAATTACGTTCACGAAGTTATTGCTTTCAGGAGACACCATCTTTCATC
CTTTGAAGGAGAGGGATCGTCCTCTGGCATGTCGAAAGTAGAATGAGCATACTAAAGTCTGGGTACGAGTACCGCGGGAC
CTAAGGGTATCCGAACCATCAGCCTGAGCTAGATAAAAATTTAGGAT---------------------------------
--------------------------------------------------------------------------------
-----------------------------------
>chr7D_694
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------------GCCTGGGTTCAGCGAAAAACAAGAGAACGTCAAAAAATGTGTGCTGTTAGCTAAAATTCAAATGAGGA
CGGCAGAAGCCC--------------------------------------------------------------------
--GAGCTACT--------------AGGATCCTCTCCACGTCAACTGTGTATCGTGAGTTATCCTCTCGAGATGAGCATGT
AACGTGAAGTCAATATTACATGCTGCACAATTCAAA-CTACGTGATGGTTAATCACC--TACTAC-----------TAGC
CTATAAATAGCGTCTCGGCCTCCCATCTGGTCATTCCAAACCCA--------AAGCATA---CCATCTCCTCTCCTCTCT
CTACTTTCATCTCATGGCTGCTCCGGCTCTCAAGTTCGCCGCCGTCATGCTCCTGGCCGCCCTCTGCGCGGCGGCGCTCG
CCCCGGCCACGTCGGGACAGCCGACGGACGC---GCTAGCAACGTGCATCGGGCGCTGCGGGTGTGTGCCCTGCCCGAAA
GGGAAGGTCTGCATCGCTATTTGCACTCCCCCGCCGCCCTGCGCGGCCAGATGCCGCTGCACCTATTCCGGCACGGGCTG
CTAGGCG-GCTGAGAC------------------------CCACGGCACCGTCCGTCAGGAAGCCTGGCAGCGCAAGC-G
CTGAAGGCAGCAGCTAGAACGTTCCACTGTGTA-----------------------------------------------
-----------------------------------------------------------------TTGTACGCCCTGTCT
TTCCATGCATGCATGTTTCATGCGTGCGTCTGTGTGCTGTGATGTGGTAATAAAGTGTACACGGATCGATCTGTCAGATA
AAAATAAATAAACAGAAATGTCATTTTCGTTTCACAATGTATATTACCTTTATCGTAGTCAAACTTCAGAGCAAGTATAA
TGAAAAACGTATA--------TCAACCTATGTAATACCAAATAAATACAGTATAAAA-TACGTTTTATGTGTATCTAATG
GTTGATTTTGTACTGTTAATAATGATT-TTTTGTAAACTTTGTCACAGGTCAAACCTAGCCAA-TTTGGCTTGTGCCAAA
ACGAATATGCATTATATTTTAAAAAAGTGAAGTGATAATCTTCCGATAGTAACATACTAGC-TTTTTGAAAAAC------
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-----------------------------------
>chr7D_699
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-----------------GGTTCACCGAAAAACAAGAGAACGTCAAAAAAGGTGTGATGTTAGCTAAAATTCAAATGAGGA
CGGCAGAAGCCC--------------------------------------------------------------------
--GAGCAAATAGGATCCGATCGGAAGGATCCTCTCCACGTCAACTGTATATCGTGAGTTATCCTCTCGAGATGAGCATGT
AACGTGAAGTCAATATTACATGCTGCACAATTCAAA-CTACGTGATGGCTGATCACC--TACTAC-----------TGGC
CTATAAATAGCGTCTCGGCCTCCCATCTGATCATTCCAAACCCA--------AAGCATA---CCATCTCCTCTCCTCTCT
CTACTTTCATCTCATGGCTGCTCCGGCTCTCAAGTTCGCCGCCGTCATGCTCCTGGCCGCCCTCTGCGCGGCGGCGCTGG
CCCCGGCCACGTCGGGACAGCCGACGGACGC---GCTAGCAACGTGCATCGGGCGCTGCGGGTGTGTGCCCTGCCCGAAA
GGGAAGGTCTGCATCGCTATTTGCACTCCCCCGCCGCCCTGCGCGGCCAGATGCCGCTGCACCTATTCCGGCACGGGCTG
CTAGGCG-GCTGAGACC---------------------------------------------------------------
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-----------------------------------
>SNPs
SSSS----------------------------------------------------------------------------
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--------------------------------------------------------------------------S-----
--------S-----------------------------------------------------S-----------------
-S---------SS-------S-S-----------S-------S--------------------S--SS-S----------
-----S-----------------S----------------S---------------S-----------------------
S--------------------------------------------S----------------------------------
-------S--------------------------------------------------S-------S-------------
--------------------------S-----------------------------S--S--SSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSS-------------S----S--------------------S-----------------------------
---S----------------------------------------------------------------------------
------------SS----------------------------------------S----S-------S------------
------------------------------------------------------------------SSSSSS--------
-----------------------S------------------------------SSSSSSSS------------------
----S-------------------------------------------------------------------------S-
----------------------------------------------------S---------------------------
---------------S---------------------------------------------S------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----S--------------------------------------------------------------------------
-----------------------------------------------S--------------------------------
-----------------------------------------------------------------S--------------
---------------SS----------S---S-----------------------------------------------S
---------------S----------------------------------------S----S------------------
-------------------S-------S---S-------------------------------------S----------
----S---SS--------------------S---S----------SS-S-S--S-----------S--------------
------------------SSS------S-----------S-----S----S----S-----S-S----------------
---------------------S-------------------S---------S---------------------S------
--------S------------------------------SS-SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_3605
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-----------------------------------------------------------------CCCATCTCCTCTCCT
CTCCC---------------------------------------------------------------------------
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-----------------------------------
>reverse_4898
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-----------------AAGGCAGAGAAGCTAGCTGC-------------------------------------------
-----------------------------------
