>input_sequence_86763
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------------------------------------------------------------ATGGCGGGGTTGCAGCTGCG
CGCGGCGCTGCTCGTGACGGCCGGTGACATCACGGCTTCCGTCCTAGAGCTCCGTCTCCGCCGTTTCGCCTTACACAAGC
GCGACGCGGAGGTTCTGGCATGGCTTCCTGCATCAACAGCTGATGGCCATCCATGGCCCAGTGCCCTTCGTCGGGGG-AG
CTGTTGGTGCTCGCGTAGGCGGTGTGCTAGAGGATGA-------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------
>chr6A_1_TraesCS6A01G222400
GCAAGTCATTGAAGGAAAATGTTGTTGCATGTCTTCAATATCTTCCTAGGTCACCCATTTGGCTGGAAGGCCCTCCCAGT
GCATGAGCACTTGTGTAGACATACCACTATCTTGATGAACAACGCGCCAAGCGAGAATGGTTGCCGGCTGAGCCATGTGG
TCAGTGTCAATACATATGGTAGGGAGATCCGACCATGCCTCGGAAACAAATGGTTTATACGTCGCCAACGTATCTATAAT
TTATGAAGTATCCATGCCATATTTACAACAATTTTATATGGTTTTGGTATCATTTGATTAGAACTAACCCGGACTGACGC
TATTTTCAGCAGAACTACCGTCGTGTCATTTTTTGTGTAGAAATAAAAGTTTTCGGAATGGGCTGAAAATTTGCGGTGAT
TTTTTATCGGAATCGATAACTCCCGAACGACCGGTATTTTCACATCTCGTTCGGAACGTGTCGAGAGCCACTTGATCAAA
ACGCACATATCTTAAAGCTAACCCCTGCCACGTCATCCAGTGTCGAGCGTTCGGAGAAGCGGTCGTCGCGAACGAAC---
-----------------------CCCACTCCCTTATCCATTCTCCCCACTCCATTCCCC------------ACATCCCGA
ATCCTCCTGGCCGGCGACCTAGAGACCCGAGTGAGGCGGAGTCCGACCGCGGGCAGGTCGCCGCGATGCTCGCCGACGCG
AAGCACTAGCCGGTGTTCTTCGGATCCGCGCCGCCCGGCTCGAGCTGCCG-------CGGCGGCCGCGGGCCGCGGCGGC
CGCTGAGCAGCCTTCATCTTCCCCTCCCGTCGTTGCC-------------------------------------------
------GAGCTGGCCGACCTCGACGCCATCGGAATCCGCCGTCGGCGAGCTGACCGTCCCCGCCGCCA------TTAGAG
GCCTCCGCCTCGGGCTGCTCCACCCTCTCGATGCGGCTGCCATTGCGAGAAGAGCCCCTTTCCGCTCTGGCGGTGATCCC
CTTTGCCGCTGTGGGAGAGGAGTCTCCTCGGCTCCGGCGTCGATCCAACAAGCGGCAACCATGGCGGGGTTGCAGCTGCG
CGCGGCGCTGCTCGTGACGGCCGGTGACATCACGGCTTCCGTCCTAGAGCTCCGTCTCCGCCGTTTCGCCTTACACAAGC
GCGACGCGGAGGTTCTGGCATGGCTTCCTGCATCAACAGCTGATGGCCATCCATGGCCCAGTGCCCTTCGTCGGGGG-AG
CTGTTGGTGCTCGCGTAGGCGGTGTGCTAGAGGATGAGTTGCGGCTCGAACAAGATCTGGGGAGGTCGGCGGCTTAGTCT
TCCATTT-CCCCCCA-CGATCGAGCCAGCAGGA------ACTGCTAC------TGTTGCTCATGTGGTATGC-TGCTATC
CCCTTTTT-TGTGATTGCTTCTGT-TTTTCCTTTAGATCATATGCAGTGTTTTTGCTA-T--GGTGACTAGATTAAGTTG
CCACGAGTACCGAGTTCACACATCGTCTTGGCATG-TTTTTAGAAATCTTTGTAATAGTTCACACATCATCACGGCAGTT
TTTAGAAATCTTTGTAATAGTGACACGGCAAATTTTAGTTTAAGTTGCCATGGCAATTTTCA--GTTCAAGTCGCCATGG
CAAATTTATTGGAAAGAGCATGG-CAAATT----TTT----TGTTTAAACATGATGGCAAATCTACATTTCCAGAACATG
GCAAATTTAACTATGTAGCACGGTAAA-TATACTTTTATAGCCATGACA-TTTTTTAATATA--TTT-------------
----------------------------------------CCATGGCAAAA--GTATTCCATTTTTGCCATGGCAAATTT
AACT-CCTC-----------------------------------------------------------------------
--------TTTTTGCCATGACAAAAAT-----------------------------AAGTTTA-TTTTCACATGGCAAAT
TTTAGGTTATGTTGCCATGGCAATTTT-TAGTTTAACTCGCCATGGCAAATTTATTATAAAGAG-CATGACAATTTTAAT
TCAAATATTATGGAAAA--TTTAAATTT-ATAGAACACGACACATTTTACTATATAGCATGTTAAATATACTTGTGTAAC
C-ATGGC-ATTTTAAAATTTA--TTTCCATGGCAAAAGTACTACTTTTTTGCCATGGCAAAAATT----AAACCA-TTTT
TCCATGGCAAATTTTACTCCATTTTATGCCATGGCAAACTTCTTTAATTAACATATTCGGAAACATGTAAAGTTGCCATG
GCAAAGTTATAATTGTTGAAAAA-CATGGCAAACTTTGCCATGGCAACTTATGATGTTCAAAAACATGG-AACATTTTGC
AGATGTTCAAAAAATATGACAAA-TTCGCCATGACATTTTAAAATGTTCAAAAAC
>chr7D_407
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------TCGGAATCGATAACTCCGGAACGACCTGTATTTTTACATCTCGTCCCGAACGCGTCCAGAACCACTTGATCAAA
ACTCACATATCTTAAAGCTAGCACCTGCCACATCATCCAGAGTCGAGCGTTCGGAGAAGCGGTCGTCGCGACCGAACGCC
ACTCCCCACCCACAGCACGCAGCCCCACTCCCCTATCCATTCTTCCCACTCCCCTCCCCACTCCCTTTCTCACATCCCGA
ATCCTCATCGCCGGCGACCTGGAGACCCGAGCGAGGCGGAGGCCGACCGCGGGCAGGTTGCCACGATGCTCGGCGACGCA
AAGCACCAGCTGGTGTTCTACGGATCTGCGCCGCCCGGCTCGAGCTGCCGTCGTGGGCGGAGGCCGTGGGCCGCGGCGGC
CGCCGAGCAGCCTCCATCTTCCCTTCCCGCCGTCGCC-------------------------------------------
------GAGCTGGCCATCCTCGACGCCATCGGAGTCCGCCGTCGCCGAGCTGACCGTCCCCACCGCCA------TCAGAG
GCCTCCGGCCCGGGCTGCTCGACCCTCTCGATAAGGCTGCCATTGCGGGTAGAGCCCCTTTCGGCTCCGGCGGTGATCCC
CTTTGACGCTGTGCGAGAGGAGTCTCCTCGGCTCCGGCGGCAATCCAACAAGCGACAGCCATGGCGGGGTTGCAGCTGCG
CGCGGTGCTGCTCGCGACGGCCAGCGAAATCGCGGCTTCCGTCCTAGAGCTCCATCTCCGCCGTTTCGCCTTACAAAAGC
GCGACGCGGAGGTTCCGACATGGCTTCCTTCATCGACAGCTGACAGCCATCCATGGCCCAGTGCCCTCCGTCCGGGGAAG
ATGTTGGTGCTCGCGTAGGCAGCGTGCTAGAGGATGAGGTGCTGCTCGGACAATATCTGGGGAGGTCGGCGGCTTCCTCT
TCCATTT-CC-CCCA-GGATCGAGCCAGCAGGA------GCTGCTAC------TGCTGCTCGTGTGGTATGC-TGCTATC
CCCTTTTT-TGTGATTGCTTCTGTTTTTTCCTCTAGATCATATGCAGTGTTTTTGCTA-TTTGGTGATTGGATTAAGTTG
CTACGAGTACTGAGATCACACATTGTCTTGGCAT-TTTTTTAGAAATCTTTGTAATAGTTCACACATCATCACGG-AAAT
TTTAGAAATCTTTGTAATAGTGACACGACAAATTTTAA-TTAAGTTGCCATGGCAATTTTTA--GTTTTAGTCGCCGTGG
TAAATTTATTGTAAAGAACATGG-CAAAATTTTGTTT----T----AAATATGATGGCAAATTTACATTTCCAGAACATG
ACAAATTTAACTACGTAGCACGGTAAA-TATACTTGTATAGCCATGGCA-TTTTTAAATATA--TTT-------------
----------------------------------------CCATGGCAAAA--GTACTCCATTTTTGCCATGGCAAAAAT
TAAT-CCATTTCTTGCCATGGCAATTTTCGCTCCATTTTTCCCATGCCAAAAATTAATCCATTTCTTTCCATGGCAATTT
TCGCTCCATTTTTTCCATGACAAAAAT-----------------------------ACGTTTA-TTTTCACATGGCAAAT
TTTAGGTTAGGTTGCCATGGCAATTTT-TTAGTTTAGTCGCCATGGCAAATTTATTATAAAGAG-CATGACAATTTTAAT
TCAAATATTATGGCAAA--CTTAAATTT-ATAGAACATGGTAAATTTTACTATGTAGCATCTTAAATATACTTGTGTCAC
AAATGGC-ATTTTT-TAATTA--TTTCCATGGCAAAAGTACTACTTTTTTGCCATGGCAAAAATT----AAACCATTTTT
GCCATGGCAAATTTTACTCAATTTTATACCATGGCAAACTTCTTTAATTAACATGTTCGAAAACATGTAAAGTTGCCATG
GCAAAGTTATAATTGTTGAAAA--CATGGCAAACTTTTCCATGGCAACATACGATGTTCAAAAACATGGCAACCTTTTGT
AGATGTTCAAAAA-TATGACAAA-TTTGCCATGGCATTTTAAAATGTTCAAAAAC
>chr3A_408
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------CGGAATCGATAACTCCCGAATGACCGGTATTTTCATATCTCATTCCGAACGTGTCGAGAGCCACTTGATCAAA
ACGCACATATCTTAAAGCTAACCCCTGCCACGTCATCCAGTGCCGAGCGTTCAGAGAAGCGGTCGTCATGAATGAA----
----------------------CCCCACTCCCCTATCCATTCTCCCCACTCCATTCCCC------------ACATGCCGA
ATCCTCCTGGCCGGCGACCTGGAGACCCGAGTGAGGCGGAGGCCGACCGCGGGCAGGTCGCCGCGATGCTCGCCGACGCG
AAGCACTAGCCGTTGTTCTTCGGATCCGCGCCGCCCGGCTCGAGCTGCCGTCGTGGGTGGAGGCCGTGGGCCGCGGCGGC
CGCTGAGCAGCCTTCATCTTCCCTTCC---------C-------------------------------------------
------GAGCTGGCCGACCTCAACGCCATCGGAATCCGCCGTCGGCGAGCTGACCGTCCCCGCCGCCA------TCAGAG
GCCTCCGCCTCGGGCTGCTCCACCCTCTCGATGCGGCTGCCATTGCGAGAAGAGTCCCTTTCAGCTCCGGTGGTGATCCC
CTTTGCCGCTGTGGGAGAGGAGTCTCCTCGGCTCCGGCGGCGATCCAACAAGCGGCAACCATGGCGAAGTTGCAGCTGCG
CGCGACGCTGCTCGCGACGGCCGGCGACATCGCGGCTTCCGTCCTAGAGCTCCCTCTCCGCCGTTTCGCCTTACACAAGC
GTGACGCGGAGGTTCTGGCATGGCTTCCTGCATCAACAGCTGATGGCCATCCATGGCCCAGTGCCCTCCGTCGGGGG-AG
CTGTTGGTGCTCGCGTAGGCGGCATGCTAGAGGATGAGTTGCGGCTCGGACAAGATCTGGGGAGGTCGGCGGCTTACTCT
TCCATTTCCC-CCCA-CGATCGAGCCAACAGGA------ACTGCTAC------TGCTGCTCCTGTGGTATGC-TGCTATC
CCCTTTTT-TGTGATTGCTTCTGT-TTTTCCTTTAGATCATATGCAGTGTTTTTGCTA-T--GGTGACTGGATTAAGTTG
CCACGAGTACCGAGTTCACACATCGTCTTGGCATGTTTTTTAGAAATCTTTGTAATAGTTCACACATCATCACGACAGTT
TTTAGAAATCTTTGTAATAGTGACACGGCAAATTTTAGTTTAAGTTGCCATGGCAATTTTCA--GTTCAAGTCGCCATGG
CAAATTTATTGGAAAGAGCATGG-CAAATT----TTT----TGTTTAAACATGATGGCAAATTTACATTTCCAGAACATG
GCAAATTTAACTATGTAGCACGGTAAA-TATACTTTTATAGCCATGGCA-TTTTTTAATATA--TTT-------------
----------------------------------------TCATGGCAAAA--GTATTCCATTTTTGCCATGGCAAATTT
AACT-CCTC-----------------------------------------------------------------------
--------TTTTTGCCATGACAAAAAT-----------------------------AAGTTTA-TTTTCACATGGCAAAT
TTTAGGTTATGTTGCCATGGCAATTTT-TAGTTTAACTCGTCATGGCAAATTTATTATAAAGAG-CATGACAATTTTAAT
TCAAATATTATGGCAAA--TTTAAATTT-ATAGAACACAACACATTTTACTATATAGCATCTTAAATATACTTGTGTAAC
C-ATGGC-ATTTTAAAATTTA--TTTCCATGGCAAAAGTACTACTTTTTTGCCATGGCAAAAATT----AAACCA-TTTT
TCCATGGCAAATTTTACTCCATTTTATGCCATGGCAAACTTCTTTAATTAACATATTCGAAAACATGTAAAGTTGCCATG
GCAAAGTTATAATTGTTGAAAAA-CATGGCAAACTTTGCCATGGCAACTTACGATGTTCAAAAACATGG-AACATTTTGT
AGATGTTCAAAAAATATGACAAA-TTCGCCATGGCATTTTAAAATGTTGAAAAA-
>chr4D_576
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------CTCCCCACTCCCTTCCCC------------ACATCCCGA
ATCCTCCTCGCCGGCGACCTGGACACCCGAGTGAGGCGGAGGCCGACTGCGGGCAATTCGCC----------GCGACGCG
AAGCACCACCCGGTGTGCTCCGGATCCGCGCCGCGTGGCTCGAGCTGCCGTCGTGTGCGGAGGCCGAGGACCGCGACGGC
CGCTGAGCAGCCTCCATCTTCCCTTCC---------CACCATCGCCGAGCTGGCCGTCCTCGCTGCCATCCGAGGCCA--
--------------------------------------CCGTCGCCGAGCTGACCATCCCCGCCGCCA------TCAGAG
GCCGCCGCCCCGGGCTGCTCGATCCTCTCAATGCGGCTGGCATTGCGAGAAGAGCCCCTTTCG-----------------
--------CCGTGCGAGAGGAGTCTCCTCGTCTCCGGTGGCGATCCAATAAGCGACAGCCATGGCGAGGTTGCAGTTGCG
CGCGGCGCTGCTCGCGACGGCCGGCGACATCGCGACTTC-GTCCTAGTGCTCCATCTCCGCCGTTTTGTTGTACACAAAC
GTGGCGTGGTGGTTCTAGCGTGGCTTCCTGCATCAACAGCTGACGGCTGTCCATGAGCCAGTGCTCGCCGCCGAAGG-AG
CTGCTGGTGCTCGCGTAGGTGGCGTGCTAGAGGAGGAGCTACTGCTTGGACATGATCTTGGGAGGTCGGCGGTTTCCTCT
CCCATTTCCC-CC-A-CGGTCAAGCGAGCAGG----------GCTGT------TGCTGCTCCTGTGGTATGCATACTATC
TCCTTTTT-TGTGATTGTTTTTGT-TCTCCCTTTAGATCATATGTACTGTTTTTTTTGCTTTGGTGATTGGATTAAGTTG
CTACGAGTACTGAGTGCACACTTTGTCATGGCAA--TTTTTAGAAATCTTTGTAATAGTTCACACATCATCATGGCAAAT
TTTAGAAATCTTTGTAATAGTCAAACGGCAAATTTTAGTTTAAATTGCCATGTCAATTTTTA--GTTTAAGTTGCCATGG
CAAATTTATTGTAAAGAGCATGG-CATTTT----TTT----T----AAATATGATGGCAAATTTACATTTCCAGAACATG
GCAAATTTAC----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------A----TTTCCAGAACATGGCAAATTTAACTAAGTAGCATGGTAAATATACTTGTATATC
C-ATGGC-ATTTTTAAATCTA--TTTCCATTGCAAAAGTACTCCATTTTTGCCAT-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------
>chr6D_615
--------------------------------------------------------------------------------
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------------GGCAACCTGGAGACCCGAGTGAGGCGGACGCCGACCGCGGGTAGCTCGCCGCGATGCTCGCCGACGCG
AAGCACCAGCCGGTGTGCTCCGGATCCGCGCCGCTCGGCTCGAGCTGCCGTCGTGGGCGGAGGCCGAGCGCCACGGCGGC
CGCTGAGCAGCCTCCATCTTCCCTTCC---------CACCGTCGCCGAGCTGGCCATCCTCGCTGCCATCCGAGGCTGCC
GTCGTCGAGCTGACCGTCCTCGACGCCACCGGAGTCCGCCATCGCCAAGCTGACCGTCCCCGCCGCCATCAGATTCAGAG
GACGCCGCCCCGGGCTGCTCGACCCTCTTGATGCGGCTGCCATTGCGAGAAGAGCCCCTTTCGGTTCCGGCGGCGATCCC
ATTTGTCACCGTGCTACAGGAGTCTCCTTGGCTCCGGCTGCGATCCAACAAGCGGCAGCCATGGAGGGGTTGCAGCTACG
CGCGACGCTGCTCGCAATGGCCAGCGACATCGCGACTTCCGTCCTAGAGCTCCAACTCCGCCGTTTTGCCTTGCACAAGA
GCGACACGTCGATTCTGGCGTGGCTTCCTACATCGACAGCTGACGGCCGTCCATGGGCCAGTGCCTTCCACCGGAGG-AG
CTGCTAGTGCTCGCGTAGGCAGCGTGCTAGAGGACGAGCTGCTCCTCGGACAGGATTTGGGGAGGTTGGCAGCTTCTTCT
TCCATTTCTC-CC-A-TGGTCGAGCGAGTAGGA------GCTGT--TGTCTCGTGCTGCTGTTGTGGTATGCATGCTATC
TTTTTTGTGTGTGATTGCTTTTGT-TTTTCCTCTAGATTATATGCAGTGC---TTTTTCTCTGGTGATTGGATTAAGTTG
CTACAAGTACTGTGTTCACAAATCGTCAAAGCAA--TTTTTAGAAATCTTTGTAATAGTTCACACATCATCACGACATTT
TTTCAAAATCTTTGTAATAGTGACATGGCAAATTTTAGTTTAAGT-------------------GTTGAAGTCACCATGG
CAAATTTCTTGTAAAGAGCATGG-AATTTT----TTTGTTTT----AAATATGATGGCAAATTTACATTTTCAGAACATG
GCAAATTTAACTATGTAGCACGGTAAA-TATACTTGTATAGCCATGACA-TTTTTTAATTTA--TTT-------------
----------------------------------------CCATGGCAAAG--CTACTCCATTTTTGCCATGAAAAAAAT
TAAT-CCATTTCTTGCCATGGCAA--------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------
>chr4D_854
ATTCAG--------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------AG
GCCGCTGCCCCGGGCTGCTTGACCCTCTTGATGCGGCTGCCATTGCGAGAAGAGCCCCTTTCGGCTCCGGCGGCGATCCC
ATTTGTCGTCGTGCGAGAGGAGTCTCCCCGGCTCCGGCGGCGATCCAACAAGCGACAACCATGGAGGGGTTGCAGCTACG
CGCAGCGCTGCTCGCAATGGCCGGTGACATCGCGGCTTCCGTCCTAGAGCTCCATCTCTAGCGTTTTGCCTTACACAAGA
GCGACGCGGCGGTTCTGGCGTGGCTTCCTGCATCGACAGCTGACGACCGTCCATGGGCCAGTTCCTTCCACCAGAGG-AG
CTGCTAGTGCTCGCGTAGGCAGCGTGCTAGAGGATGAGCTGCTGCTCAGACGGGATTTGGGGAGTTTGGTGGCTTCCTCT
TCCATTTCCC-CC-A-CGGTCAAGCGAGTAGGAGCTTCTGCTGT--TGTCTCGTGCTGCTGTTGTGGTATGCATGCAATC
TCTTTTTTGTGGGATTACTTCTGT-TTTTCCTCTAGATTATATGCAGGGCTTTTGCT---CTGGTGATTGCATTAAGTAG
ATACAAGTGCTGAGTTCACAAATCGCCAAAGCAA--TTTTTATAAATCTTTGTAATAGTTCACACATCATCGCGGCATTT
TTTCGAAATCTTTGTAATAGTGACACGACAAATTTTAGTTTAAGT-------------------GTTTAAGTCGCCATGG
AAAATTTATTGTAAAGAGCATGACAATTTT----TTTGTTTT----AAATATGACGGCAAATTTACATTTCCAGAACATG
GCAAATTTAACTATGTAGCACGGTAAA-TATACTTGTATAGCCATGGCA-TTTTTT------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------AATTTA--TGTCCATGGCAAAAGTACTCCATTTTTGCCATGACAAAAATT----AATTCA-TTT-
-----------------------------------------------------------------------CTTGCCATG
GCAA----------------------------------------------------------------------------
-------------------------------------------------------
>chr5D_1220
GCG-----------------------------------------------------------------------------
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------------------------------------------TGCTTGGACAGGATCTGGGGAGGTCGGGTGCTTCCTCT
TCCATTT-TC-CCCGCCAGTCGAGTGAGTAGGA------GCAGT--T------TGCTGCTCCTGTGGTATGCATGCTATC
TCCTTTTT-TGTGATTGCTTCTGT-TTTCCCTCTAGATCATATGCAGTGTTTTTGCT--TTTGGTGATTGGATTAAGTTG
CTACAAGTACTGAGTTCACATCA--TCACGGCAA--TTTTCAGAAATCTTTGTAATAGTTCACACATCATCACGGCAATT
TTTAGAAATCTTTGTAATAGTTGCACGGCAAATTTTAGTTTAAGTTGCCATGACAATTTTTA--GTTTAAGTCGCCATGG
CAAACTTATTGTAAATAGCATGG-CAA-TT----TTTGTTTG----AAATATGACGGCAAATATACATTTCCAAAACATG
GCAAATTTAACTACGTATCACGG-AAA-TATACTTGTATAGCCATGGCA-TTTTTAATTTG----TTTCCATGGCAAAAG
TACTCCATTTTTGCTATGGAAAAAATTAATCCGTTTATTGACATGGCAG-TTTTCACTCCATTTTTGCCATGGCAAATTT
AACTTCAT------------------------------------------------------------------------
--------TTTTTGGCATGACAAAAAT-----------------------------ATGTTTATTTTTCGCATGGCAAAT
TTTAGGTTAAGTTGCCATGGCAATTTT-CAGTTTAAGTCGCCATGACAAATTTATTGTAAAGAG-CATGGCAATTTTAAT
TCAAATATTATGCAAATCTAAA----TTTATAGAACATGGCAAATTTTATTATGTAGCATCTTAAATATACTTGTGTAGC
C-ATGGC-ATTTCT-TAATTTATTTTCCATGGCAAAAGTACTACTTTTTTGCCATGGAAAATTTC----ACACCATTTTT
GGCATGGCAAATTTAACTCCATTTTATGCCATGTCAAACTTCTATAATTAACATGTTCAAAAACATGTAAACTTGCCATG
GCAAACTTATAGTTGTTCAAAAA-CATGGCAAACTTTGCCATGGCAACTTACGATGTTCAAAAACATGGCAACCTTTTGT
AGATGTTCAAAAA-TATGACAAA-TTTGACATGGCATTTTAAAATGTTCAAAAAC
>chr4D_1501
--------------------------------------------------------------------------------
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----------------------ACACGGCAAATTTTAGTTTAAGTTTCCATGGCAATTTTTTTTGTTTAAGTTTCCATGG
CAAATTTATTGTAAAGAGCATGG--AA-AT----TTTGTTTT----AAATATGATGGCAAATTTACATTTCCAGAACATG
GCAAATTTAACTATGTGGCACGG-CAAGTATACTTGCATAGCCATGGCA-GTTTTTTAATTTATTTG-------------
----------------------------------------CCATGGCAAAA--TTACTCCATTTTTGTCATGGCAAATTT
AACTTCAT------------------------------------------------------------------------
--------TTTTTGCCATGGAAAAAAT-----------------------------ACTTTTATTTTTCACATGGCAAAT
TTTAGTTTTAGTTGCCATTGGAAATTT-TATTTTTAGTTGCCATGGCAAATTTATTGTAAAGAG-CATGGAAA-ATTAAT
TTAAATATTATGGCAAA--TTTACATTT-GTAGAACATGGCAAGTTTTACTATGTAGCATCTTAAATATATTTGTGTAGC
C-ATGGT-ATTTTT-TAATTTATTTTCCATGGCAAAAGTACTACATTTTTGCCATGGCAAAAATT----AAACCATTTTT
GCTATGACAAATTTAACTCCATTTTATGCCATGGCAAACTTCTTTAGTTAACATGTTCAAAAACATGCAAACTTGCTATG
GCAAAGTTATAGATGTTC-AAAA-CATGGCAATCTTTGCCATGGCAACATAAGATGTTAAAAAATATGGCAAATTT----
-------------------------------------------------------
>chr2B_1501
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------ACACGGCAAATTTTAGTTTAAGTTTCCATGGCAATTTTTT-TGTTTAAGTTTCCATGG
AAAATTTATTGTAAAGAGCATGG--AA-AT----TTTGTTTT----AAATATGATGGCAAATCTACATTTCCAGAACATG
GCAAATTTAACTATGTAGCACGG-CAAGTATACTTGCATAGCCATGTCAGTTTTTTAATTTA--TTTGCCATGGCAAAAG
TACTCCATTTTT--------------------------TGCCATGGCAATTTTTTACTCCATTTTTGTCATGGCAAATTT
AACT-CAT------------------------------------------------------------------------
--------TTTTTGCCATGGAAAAAAT-----------------------------ACTTTTATTTTTCACATGGCAAAT
TTTAGTTTTAGTTGCCATTGGACATTT-TATTTTTAGTTGCCATGGCAAATTTATTGTAAAGAG-CATGGAAA-ATTAAT
TTAAATATTATGGCAAA--TTTACATTT-GTAGAACATGGCAAGTTTTACTATGTAGCATCTTAAATATATTTGTGTAGC
C-ATGGT-ATTTTT-TAATTTATTTTCCATGGCAAAAGTACTACA-TTTTGCCATGGCAAAAATT----AAACCATTTTT
GCTATGACAAATTTAACTCCATTTTATGCCATGGCAAACTTGTTTAGTTAACATGTTCAAAAACATGCAAACTTGCTACG
GCAAAGTTATAGATGTTC-AAAA-CATGGCAATCTTTGCCATGGCAACATAAGATGTTAAAAAATATGGCAAATTT----
-------------------------------------------------------
>chr1D_1501
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------ACACGGCAAATTTTAGTTTAAGTTGCCATGGCAAATTTTAC--TTTAAGTTGCCATGG
AAAATTTATTGTAAAGAGCATGG-C-A-AT----TTTGTTTT----AAATATGATGGCAAATTTACAT------------
----------------AGCACGG-TAATTATATTTATATAGCCATGGCGTTTTTTAATTTA----TT-------------
----------------------------------------CCATGGCAAAA--GTACTCCAGTTTTGCCATGGCAACATT
AA-TCCAT------------------------------------------------------------------------
--------TTTTTGCCATGGCAAAATTTTTACTTCACTTTTGCCATGGCAAATTTAACTCTATTTTTTGCCATGGCAAAT
TTTAGTTTAAGTTGCCATTGCAA-------------------------AATTTATTTTAAGTTGCCATGGCAATTTTAAT
TTAAATATTATGGCAAA--ATTACATTTTATAGAACATGGCAAATTTTACTATGTAGCATCTTAAATATGCTTGTGTAAC
C-ATGACAATTTTT-AATTTA--TTTCCATGGCAAAAGTACTACATTTTTGGCATGGCAAAAATT----AAACCATTTTT
GCCATGACAAATTTCACTCCATTTTATGCCATGGCAAACTTCTTTAATTAACATGTTCAAAAACATGCAAACTTGCCATG
GCAAAGTTATAGATGTTT-AAAAATATGGCAAACTTTG------------------------------------------
-------------------------------------------------------
>chr2B_1505
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------GGCAAATTTTAGTTTAAGTTTCCATGGAAATTTTTT--GTTTAAGTTTCCATGG
CAAATTTATCGTAAAGAGCATGG--AA-AT----TTTGTTTT----AAATATGATGGCAAATTTACATTTCCAGAACATG
GCAAATTTAACTATGTAGCACGG-CAACTATACTTGCATAGCCATGGCAGTTTTTAAATTTA--TTTGCCATGGT-----
-----------------------------------------------AATTTTTTACTCCATTTTTGTCATGGCAAAATT
AACTTAAT------------------------------------------------------------------------
--------TTTTTGCCATGGAAAAAAT-----------------------------ACTTTTATTTTTCGCATAGCAAAT
TTTAGTTTTATTTGCCATTGGAAATTT-TATTTTTAGTTGCCATGGAAAATTTATTGTAAAGAG-CATGGAAA-ATTAAT
TTAAATATTATGGAAAA--TTTACATTT-GTAGAACATGGCAAGTTTTACTATGTAGCATCTTAAATATATTTGTGTAGC
C-ATGGT-ATTTTT-TAATTTATTTTCCATGGCAAAAGTACTACATTTTTGCCATGGCAAAAATT----A----ATTTTT
GCCATGACAAATTTAACTCCATTTTATGCCATGGCAAACTTCTTTAGTTAACATGTTCAAAAACATGCAAACTTGCTATG
GCAAAGTTATATATGTTC-AAAA-CATGGCAATCTTTGCCATGGCAACATAATATGTTAAAAAATATGGCAATTTTGC--
-------------------------------------------------------
>chr2B_1688
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------TTG-------------
----------------------------------------CCATGGCAA-TTTTCACTCCATTTTTTCCATGGCAAATTT
GATTCCAT------------------------------------------------------------------------
--------TTTTTTTCATGACAAAAAT-----------------------------ACATTCA-TTTTCACATGGCAAAT
TTTAGGTAAAGTTGCCATGGCAATTTTTTAGTTTAAGTCGGCATGGCAATTTTATTGTAAAGAG-CATGGCAA-TTTAAT
TCAAATATTATGGCAAA--AAA----TTTATAGAACATGGCAAATTTTACTATGTAGAACCTTAAATATACTTGTGTAGC
C-ATGCC-ATTTTT-AATTTA--TTTCCATGGCAAAAGTACTACTTTTTTGCCATGGCAAAA--TACACC----ATTTTT
GCCATGGCAAATTTTACTCCTTTTTCGCCAT--GCAAACTTCTTTAATTAACATGTTAAAAAACATGTAAACTTGCCATG
GCAAATTTATAGTTGTTC-AAAAACATCGCAAACTTTGCCATGTCAACTTACGAAGTTCAAAAACATGGCAACCTTTTGT
AGATGTTCAAAAA-TATCACAAA-TTTGCCATGGAATTTTAAAATGTTCAAA---
>chr4B_1709
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------------------------------------------------ATTATTGCCATGGCAAATTT
ATATCCAG------------------------------------------------------------------------
--------TTCTTGCCATGACAAAAAT-----------------------------ACCTTTA-TTTTCACATGGCAAAT
TTTAGGTTAAGTTTCCATTGCAATTTT-CAGTTTAAGTCGCCATGACAAATTTGTCATAAAGAG-CATGGCAATTTCAAT
TCAAATATTATGACAAA--TTTAAATTT-ATAGAATATGGCAAA-TTTATTATGTAGCGTCTTAAATATACTTGTGTAGC
C-ATGGC-ATTTTT-TATTTA--TTTCCATGGAAAAAGTACTACTTTTTTGCCATGACAAAAACTAAACA----ATTTTT
GCCATGGCAAATTTAACTCCATTTTATGCCATGGCAAACATCTTTAATTAACATGTTCAAAAACAAGTAAACTTGCCATG
GCAAAGTTATAGTTGTTC-AAAA-CAAGGCAAACTTTGCCATGGCAACTTACGATGTTCAAAAACATGACAACCTTTTGT
AGATGTTCAAAAA-TATGAAACTTTTTGCCATGGATTTTTAAAATGTTCAAAAAC
>SNPs
--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSS----------------------------------------------S---------------------------
--------------------------------------------------------------------------------
--------------------------------S-----------------------------------------------
--------------------S--------------------S--------------------------------------
------------------------------------------------------------S-----S-------------
-----------------------S-----S---S----------------------------------------------
---------------------------------------------------------------------------S----
--------------------------------------------------------------S----S------------
---------------------------------------S----------------------------------------
--------------S----------------S---------------------S--------------------------
-------------------------------------------------------------------S------------
----------------------S-------------------------S---------------------------S---
----------S--------------------------------------------S-----S------------------
---------------------------------------------------------------------S----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------S--------------------
---------------------------------------------------S---------------------------S
---------------------------------S---------------------
>forward_398
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------TGGGCTGAAAATTTGCGGTG--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------
>reverse_1329
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------AACAAGATCTGGGGAGGTCG------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------
