>input_sequence_86725
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------ATGGTTGCCGTAGAGCATGCCCTGGACGTGGATGGAGTCG
TCGCAGTAGCGGCAGAAGAGCACCTGGCCTCCAGGCAGAAGATGATGGTGGTGACAGCACGTGTGTTCCCGGAGAAAGAT
GAAGCTCCTCGCGCTTCCCACATCGTGGCTAGC------------------------------GTGCATGATGGCGGCAG
GCGGCTCGCGATTAGCTTCCTAATAGGATGGATGCGTCCGAGATAA----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
>chr2A_1_TraesCS2A01G271100
ATGCAATAATTATCATGATAGAAAGTATTCAGCCGGTTTTGTATGTGTTTATGCTTTGGCAACCATACTAACTTACAATG
CTGTAAGACGATCTGTACGTACATATACTGATGAGTTATGAAGAAAAATAAAATAGGTACATTTGTAACAGTGTAATACC
TGATCCGAAAAAAGTTAAATAATTATCATGATAGAAAGTATTCAGCCAGTTTTGTATGTGTTTATGCTTTGGCAACCATA
CTAACTTACAATGCTGTAAGACGATCTGTACGTACATATACTGATGAGTTATGAAGAAAAATAAAATAGGTACATTTGTA
ACAGTGTAATACCTGATCCGAAAAAAGTTATTCATTAATATTATTAGAGGAAAGAGGCGCGCAGACAAAGAAAGAGAGGC
GGTGCAAATAAGGCCTTAAATAGTATGTCCTCAAGTTTGCCGATGATTGCCGTAGAGCATGCCCTGGACGTGGATGGAGT
CGTCGCAGTAGCGGCAGAAGAGCACCTGGCCTCCAGGCAGAAGATGATGGTGGTGACAGCACGTGTGTTCCCGGAGAAAG
ATGAAGCTCCTCGCGCTTCCCACATCGTGGCTAGCGTGCATGATGGCGGCAGGCGGCTCGCGATTAGCTTCCTAATAGGA
TGGATGCGTCCGAGATAAGTTTTTTAATAGGATGGATTTGTGTGAGATTAGTTTCCTAATAGGATGGATGCACTCTGATT
TAGTTTCCTAGAATAGGATGCACCTGTGATTATTAGTTTCCTAATTGCTTAGGCGTGGAGTTTCATATTTTCCTCCACGG
TGGAGTACGGTCAGTCAATGTAAATTACTAAGTGCACACAGAAAATGGGTTAGGTTAAGGCTAACCGTTAGATTGATTTT
ACTGGGCCTAATCGTGCGGTTGTATTGGATCTGTGTACGCTTTGTGGGGTGTGCTTAAAGAAGTTCTTGTTTGATTGTTT
AATAGTAGTATAGATAAATAGTATGTCCTCAAGTTTGCCGATGGTTGCCGTAGAGCATGCCCTGGACGTGGATGGAGTCG
TCGCAGTAGCGGCAGAAGAGCACCTGGCCTCCAGGCAGAAGATGATGGTGGTGACAGCACGTGTGTTCCCGGAGAAAGAT
GAAGCTCCTCGCGCTTCCCACATCGTGGCTAGC------------------------------GTGCATGATGGCGGCAG
GCGGCTCGCGATTAGCTTCCTAATAGGATGGATGCGTCCGAGATAAGTTTTTTAATAGGATGGATTTGTGTGAGATTAGT
TTCCTAATAGGATGGATGCACTCTGATTTAGTTTCCTAAAATAGGATGCACCTGTGATTATTAGTTTCCTAATTGCTTAG
GCGTGGAGTTTCATATTTTCCTCCACGGTGGAGTACGGTCAGTCAATGTAAATTACTAAGTGCACACAGAAAATGGG---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------TTAGGTTAAGGCTAACCGTTAGATTGATTTTACTGGGCCTAA-TCGTGCGG
TTGTATTGGATCTGTGTACGCTTTGTGGGGTGTGCTTAAAGAAGTTCTTGTTTGATTGTTTAATAGTA-GTATAGATGTG
TGCACCTACGCAACACTCAGACAACATCTGAGCGGTGCCATTCGACACCGAGGAGGCCGCATCTATGGAT----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------TAAGTCCTATATGTTTCATCGTCACATGCAACAAATGGAACACAAATT
AAGATCCTACATATTGGTCTCAATATTAATGCTCATGACTATCACAAGAACGGATTCAATTTCTTTCATGACTTTCACAA
GAATAGTTTGGATATTTTCAAAATAAATATTCATGCACTTTTGATGT---TGAATTTTATAATTGTATGTACATCCCATA
AAAATTATTTGTGTATTTACTACA-AAAA--GAATT--GTGTAGCCCGTTGGTAAGTACGTGTGTGGATTTCACCAAGAA
AAAGTACGTACGTAGGGTCTTAGATCATGGAACATGTACAAAAAACGAACCTGATGCAAGTACAACATGCCGAAGGATTA
TAATGGCGTCATTATAATCATTTTACTCTCTCATTGCCAACCAGCACACAAGGATA-------------CAACATGTTCG
TTTGAAATATGGATCAGGGCCAGTAGAAAGGGAGCCGGATCATGCATCATAGATTAAGCTTGCAATTGAAATAGTAATTT
AG-AATAGTTAACAGGTAAACTAACATCATGTTTAGATTCTACATATTTTTTTAATTAAATTTCATATATAACATGTCAA
AATTGGATATAGGGTCTAAAATAT
>chr4B_1
ATCCA---------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------ATAATTATCATGATAGAAAGTATTCAGCCAGTTTTGTATGTGTTTATGCTTTGGCAACCATA
CTAACTTACAATGCTGTAAGACGATCTGTACGTACATATACTGATGAGTTATGAAGAAAAATAAAATAGGTACATTTGTA
ACAGTGTAATACCTGATCCGAAAAAAGTTATTCATTAATATTATTGGAGGAAAGAGGCGCGCAGACAAAAAAAGAGAGGC
GGTGCAAATAAGGCCTTAAATAGTATGTCCTCAAGTTTGCCG--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------ATGGTTGCCGTAGAGCATGCCCTGGACGTGGATGGAGTCG
TCGCAGTAGCGGCAGAAGAGCACCTGGCCTCCAGGCAGAAGATGATGGTGGCGACAGCACGTGTGTTCTCGGAGAAAGAT
GAAGCTCCTCGCGCTTCCCACATCGTGGCTAGC------------------------------GTGCATGATGGCGGCAG
GCGGCTCGCGATTAGCTTCCTAATAGGATGGATGCGTCCGAGATAAGTTTTTTAATAGGATGGATTTGTGTGAGATTAGT
TTCCTAATAGGATGGATGCACTCTGATTTAGTTTCCTAGAATAGGATGCACCTGTGATTATTAGTTTCCTAATTGCTTAG
GTGTGGAGTTTCATATTTTCCTCCACGGTGGAGTACGGCCAGTCAATGTAAATTACTAAGTGCACACAGAAAATGGG---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------TTAGGTTAAGGCTAACCGTTAGATTGATTTTACTTGGCCTAA-TCGTGCGG
TTGTATTGGATCTGTGTACGCTTTGTGGGGGGTGCTTAAAGAAGTTCTTGTTTGATTGTTTAATAGTA-GTATAGATG--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
>chr4B_1
ATCCAATAATTATCATGATAGAAAGTATTCAGCTG---------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------GTTTTGTATGTGTTTATGCTTTGGCAACCATA
CTAACTTACAATGCTGTAAGACGATCTGTACGTACATATACTGATGAGTTATGAAGAAAAATAAAATAGGTACATTTGTA
ACAGTGTAATACCTGATCCGAAAAAAGTTATTCATTAATATTATTGGAGGAAAGAGGCGCGCAGACAAAGAAAGAGAGGC
GGTGCAAATAAGGCCTTAAATAGTATGTCCTCAAGTTTGCCG--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------ATGGTTGCCGTAGAGCATGCCCTGGACGTGGATGGAGTCG
TCGCAGTAGCGGCAGAAGAGCACCTGGCCTCCAGGCAGAAGATGATGGTGGCGACAGCACGTGTGTTCCCGGAGAAAGAT
GAAGCTCCTCGCGCTTCCCACATCGTGGCTAGC------------------------------GTGCATGATGGCGGCAG
GCGGCTCGCGATTAGCTTCCTAATAGGATGAATGCGTCCGAGATAAGTTTTTTAATAGGATGGATTTGTGTGAGATTAGT
TTCCTAATAGGATGGATGCACTCTAATTTAGTTTCCTAGAATAGGATGCACCTGTGATTATTAGTTTCCTAATTGCTTAG
GCGTGGAGTTTCATATTTTCCTCCACGGTGGAGTACGGTCAGTCAATGTAAATTACTAAGTGCACACATAAAATGGG---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------TTAGGTTAAGGCTAACCGTTAGATTGATTTTACTTGGCCTAA-TCGTGCGG
TTGTATTGGATCTGTGTACGCTTTGTGGGATGTGCTTAAAAAAGTTCTTGTTTGATTGTTTAATAGTA-GTATAGAT---
---------------------------------------------------------------------TAAT-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
>chr5A_1
ATCCAATAATTATCATGATAGAAAGTATTCAGCCG---------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------GTTTTGTATGTGTTTATGCTTTGGCAACCATA
CTAACTTACAATGCTGTAAGACGATCTGTACGTACATATACTGATGAGTTATGAAGAAAAATAAAATAGGTACATTTGTA
ACAGTGTAATACCTGATCCGAAAAAAGTTATTCATTAATATTATTGGAGGAAAGAGGCGCGCAGACAAAAAAAGAGAGGC
GGTGCAAATAAGGCCTTAAATAGTATGTTCTCAAGTTTGCCG--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------ATGGTTGCCGTAGAGCATGCCCTGGACGTGGATGGAGTCG
TCGCAGTAGCGGCAGAAGAGCACCTGGCCTCCAGGCAGAAGATGATGGTGGCGACAACACGTGTGTTCCCGGAGAAAGAT
GAAGCTCCTCGCGCTTCCCACATCGTGGCTAGC------------------------------GTGCATGATGGCGGCAG
GCGGCTCGCGATTAGCTTCCTAATAGGATGGATGCGTCCGAGATAAGTTTTTTAATAGGATGGATTTGTGTGAGATTAGT
TTCCTAATATGATGGATGCACTCTGATTTAGTTTCCTAAAATAGGATGCACCTGTGATTATTAGTTTCCTAATTGCTTAG
GTGTGGAGTTTCATATTTTCCTCCACGGTGGAGTACGGTCAGTCAATGTAAATTACTAAGTGCACACAGAAAATGGG---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------TTAGGTTAAGGCTAACCGTTAGATTGATTTTACTTGGCCTAA-TCGTGCGG
TTGTATTGGATCTGTGTACGCTTTGTGGGGTGTGCTTAAAGAAGTTCTTGTTTGATTGTTTAATAGTA-GTATAGA----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
>chr5A_1
ATCCAATAATTATCATGATAGAAAGTATTCAGCCG---------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------GTTTTGTATGTGTTTATGCTTTGGCAACCATA
CTAACTTACAATGCTGTAAGACGATCTGTACGTACATATACTGATGAGTTATGAAGAAAAATAAAATAGGTACATTTGTA
ACAGTGTAATACCTGATCCAAAAAAAGTTATTTATTAATATTATTGGAGGAAAGAGGCGCGCAGACAAAAAAAGAGAGGC
GGTGCAAATAAGGCCTTAAATAGTATGTCCTCAAGTTTGCCG--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------ATGGTTGCCGTAGAGCATGCCCTGGACGTGGATGGAGTCG
TCGCAGTAGCGGCAGAAGAGCACCTGGCCTCCAGGCAGAAGATGATGGTGGCGACAGCACGTGTGTTCCCGGAGAAAGAT
GAAGCTCCTCGCGCTTCCCACATCGTGGCTAGC------------------------------GTGCATGATGGCGGCAG
GCGGCTCGCGATTAGCTTCCTAATAGGATGGATGCGTCCGAGATAAGTTTTTTAATAGGATGGATTTGTGTGAGATTAGT
TTTCTAATAGGATGGATGCACTCTAATTTAGTTTCCTAGAATAGGATGCACCTGTGATTATTAGTTTCCTAATTGCTTAG
GTGTGGAGTTTCATATTTTCCTTCACGGTGGAGTACGGTCAGTCAATGTAAATTACTAAGTGCACACAGAAAATGGG---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------TTAGGTTAAGGCTAACCGTTAGATTGATTTTACTTGGCCTAA-TCATGCAG
TTGTATTGGATCTGTGTACGCTTTGTGGGGTGTGCTTAAAGAAGTTCTTGTTTGATTGTTTAATAGTA-GTATAGATCAG
TAGTA---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
>chr7A_4
---CAATAATTATCATGATAGAAAGTATTCATCCG---------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------GTTTTGTATGTGTTTATGCGTTGGCAACCATA
CTAACTTACAATGCTATAAGACGATCTGTACGTACAGATACTGATGAGTTATGAAGAAAAATAAAAAAGGTACATTTGTA
ACAGTGTAATACCTGATCCGGAGAAAGCTATTCATTAATATTATTGGAGGAAAAAGGCGTGCAGACAAAGAAAGAGAGGC
GGTGCAAATAAGGCCTTAAACAGTATGCCTTCAAGTTTGCCG--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------ATGGTTGCCGTAGAGCATGCCCTGGACGTGGATGGAGTCG
TCGCAGTAGCGGCAGAAGAGCACCTGGCCTCCAGACAGAAGATGATGGTGGCGACAACACGTGTGTTCCCGGAGAAAGAC
GAAGCTCCTCGCGCTTCCCACATCGTGGCTAGC------------------------------GTGCATGATGGCGGCAG
GCGGCTCGCGATTAGCTTCCTAATAGGATGGATGCGTCCGAGATAAGTTTTTTAATAGGATGGATTTGTGTGAGATTAGT
TTTCTAATAGGATAGATGCAGTCTGATTTAGTTTCCTAGAATAGGATGCACCTATGATTATTAGCTTCCTAATTGTTCAG
GCGTGGAGTTTCATATTTTCCTCCACGGTGGAGTACGGTCAGTCAATGTAAATTGCTAAGTGCACACAGAAAATGGGTTA
GGTTAAGGCTAACCGTTAGATTGATTTTACTGGGCCTAATCGTGCGGTTGTATTGGATCTGTGTACGCTTTGTGGGGTGT
GCTTAAAAAAGTTCTTGTTTGATTGTTTAATAGTAGTATAGAAGACAAAGAAAGAGAGGCGGTGCAAATAAGGCCTTAAA
CAGTATGCCTTCAAGTTTGCCGATGGTTGCCGTAGAGCATGCCCTGGACGTGGATGGAGTCGTCGCAGTAGCGGCAGAAG
AGCACCTGGCCTCCAGACAGAAGATGATGGTGGCGACAACACGTGTGTTCCCGGAGAAAGACGAAGCTCCTCGCGCTTCC
CACATCGTGGCTAGCGTGCATGATGGCGGCAGGCGGCTCGCGATTAGCTTCCTAATAGGATGGATGCGTCCGAGATAAGT
TTTTTAATAGGATGAATTTGTGTGAGATTAGTTTTCTAATAGGATGGATGCACTCTGATTTAGTTTCCTAGAATAGGATG
CACTTGTGATTATTAGCTTCCTAATTGTTCAGGCGTGGAGTTTCATATTTTCCTCCACGGTGGAGTACGGTCAGTCAATG
TAAATTGCTAAGTGCACACAGAAAATGGGTTAGGTTAAGGCTAACCGTTAGATTGATTTTACTGGGCCTAAATCGTGCGG
TTGTATTGGATCTGTGTACGCTTTGTGGGGTGTGCTTAAAAAAGTTCTTGTTTGATTGTTTAATAGTA-GTATAGAAATA
GAAT----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
>chr4B_311
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------TACATTTGTA
ACAGTGTAATACCTGATCCGGAAAGAGTTATTCATTATTATTATTGGAGGAAAGAGGCGCGCAGACAAAGAAAGAGAGGC
GGTGCAAATAAGGCCTTAAACAGTATGTCTTCAAGTTTGACG--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------ATTGCAGATATGTTGGATCAT-------------------
------------------------------------------------TTGAAACTGCACAAGTATATAAGAATAAATAT
ATGTGGCAAAATAGCGAAAGGTATATGGTTTCTCTGTCATGAAACAAAATAAATCCGATTGATGTGCATGATGGCGGCAG
GCGGCTCACGATTAGCTTCCTAAT-GGATGGATGCGTCCGAGATAAGTTTTTTAATATGATGGATTTGTCTGAGATTAGT
TTCCTAATAGGATGGATGCACTCTGATTTACTTTCCTAGAATGTGATGCACCCGTAATTATTAGTTTCCTAATTTCCCAG
GCGTGGAGTTTCATATTTTCCTTCACGGTGGAGTACGGTCAGTCAATGTAAATTACTAAGTGCACACAAAAAATGGG---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------TTA-----AGTCTAACCGTTAGATTGATTTCAGTGGGTCT-AATCGTGCGG
TGGTATTGGATCTGTGTACACTTTGTGGGGTGTGCTTAAAGAAGTTCTTGTTTGATTGTTTAATAGTA-GTATAGAT---
---------------------------------------------------------------------AAATTACAAAA
AACATGAT------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------GAATCCTCAACTAAGA
AAGAGCCAACAATTTGG----------------------------------------AACATGCTACAAAACTGGTGAAG
ATAGAAAGC-------------------ATTCATCCTCTTTTTCCTTGTCGTAAGGAGTAGCTTCAGCATACATTTGTAA
CAGTGT--------------------------------------------------------------------------
----------------------------------------------------------AATACCTGATCCGGAAAGAGTT
AT------TCATTATTATTATTGGAGGAAAGATGCGCGCAGACAA-----------------------------------
------------------------AGAAAGAGAGGCGGTGCAA---------ATAAGGCCTTAAACAGTATGTCTTCAAG
TTTGATGATTGC--------------------------------------------------------------------
------------------------
>chr3A_438
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------TGCCG--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------ATGGTTGCCGGAGAGCATGCCCTGGACGTGGATGGAGTCG
TCGCAGTAGCGGCAGAAGAGCGCCTGGCCTCCAGGCAGAAGACGATGGCGGCGATAGCACGTGTGTTCCCGGAGGAAGAC
GAAGCTCCTCGCGCTTCCCCCATCGTGGCTAGC------------------------------GTGTATGATGGCGGCAG
GCGGCTCGCGATTAGCTTTCTAATAGGATGGATGCGTCCGATATAAGTTTTTTAATAGGATGGATTTGTCTGAGATTAGT
TTCCTAATAGGATGGATGCACTCTGATTTAGTTTCCTAGAATAGGATGCACCCGTGATTATTAGTTTCCTAATTGCTCAG
GCGTGGAGTTTCATATTTTCCTCCACGGTGGAGTACGGTCAGTCAATGTAAATTGCTAAGTGCACACAGAAAATAGT---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------TTAGGTTAAGGCTAATCGTTAGATTGATTTTAGTGGGCCT-AATCGTGCGG
TGCTATTGGATCTGTGTACGCTTTGTGGGGTGTGCTTAAAGAAATTTTTGTTTGATTGTTTAATAGTA-GTATAGAT---
---------------------------------------------------------------------AA---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
>chr5B_438
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------TGCCG--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------ATGGTTGCCGGAGAGCATGCCCTGGACGTGGATGGAGTCG
TCGCAGTAGCGGCAGAAGAGCGTCTGGCCTCCAAACAGAAGACGATGGCGGCGATAGCACGTGTGTTCCCGGAGGAAGAC
GAAGCTCCTCGCGCTTCCCCCATCGTGGCTAGC------------------------------GTGCATGATGGCGGCAG
GCGGCTCGCGATTAGCTTCCTAATAGGATGGATGTGTTCGAGATAAGTTTTTTAATAGGATGGATTTGTCTGAGATTAGT
TTCCTAATAGGATGGATGCACTCTGATTTAGTTTCCTAGAATAGGATGCACCCGTGATTATTAGTTTCCTAATTGCTCAG
GCGTGGAGTTTCATATTTTCCTACACGGTGGAGTACGGTCAGTCAATGTAAATTGCTAAGTGCATACAGAAAATGGT---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------TTAGGTTAAGGCTAACCGTTAGATTGATTTTAGTGGGCCT-AATCGTGCGG
TGGTATTGGCTCTGTGTACGCTTTGTGGGGTGTGCTTAAAGAAGTTCTTGTTTGATTGTTTAATAGTAAGTATAGAT---
---------------------------------------------------------------------TTAATAGTA--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
>chr3A_996
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------TGCCGATGGTTGCCGGAGAGCATGCCCTGGACGTGGATGGAGTCA
TCGCAGTAGCGGCAGAAGAGTGCCAGGCCTCCAAACAGAAGACGATGGCGGTGATAGCACGTGTGTTCCCGGAGAAAGAC
GAAGCTCCTCACGCTTCCCCCATCATGGCTAGC------------------------------ATGCATGATGGCGGCAG
GCGGCTCGCGATTAGCTTCCTAATAGGATGGATGCGTCCGAGATAAGTTTTTTAATAGGATGGATTTGTCTGAGATTAGT
TTCCTAATAGGATGGATGCACTCTGATTTAGTTTCCTAGAATAGGATGCACCCGTGATTATTAGTTTCCTAATTGCTCAG
GCGAGGAGTTTCATATTTTCCTCCACGGTGGAGTACGGTCAGTCAATGTAAATTTCTAAGTGCACACAGAAAATGGT---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------TTAGGTTAAGGCCAACCGTTAGATTGATTTTTGTGGGCCT-AATCGTGCGG
TGGTATTGGATCTGTGTACGCTTTGTGGGGTGTGCTTAAAGAAGTTCTTGTTTGATTGTTTAATAGTA-GTATAGATGGA
TGCAC---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
>chr2B_1532
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------ATGTG
TGCACCTACGCAACACTCAGTCAACATCTGAGCGGTGCCATTCGACACTGAGGAGGTCGCGTCTATGGAT----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------TAAGTCCTATATGTTTCATCGTCACATGCAGCAAATGGAACACAAATT
AAGATCCTACATATTGGTCTTAATATTAATGTTCATGACTATCAGAAGAACGGATTCAATATCTTTCATGACTTCCACAA
GAATTGTTTGGATATTTTCAAAATAAATATTCATGCGCTTTTGATGT---TGAATTTTATAATTGTATCTACATCCCATA
AAAATTCTTTGTGTATTTATACTGCAAAAAGGAATTGTGTGTAGCCCGTTGGTACGTACGTGTGTGGATTTCGCCAAGAA
AAGTTACGTACGTAGGGTCTTAGATCATGGAACATGTACAAGAAAAGAACCCGGTGTAAATACAACATGCCGAAGGATTA
TAATGGCGTCATTATAATTATTTTACTCGCTCATTGCCAACC-------------A-------------CAACATGTTCT
TTTGAAATACGGGTCAGGGCCGGTAGAAAAGGAGCCAGATCGC---------ATTAAGCTTGCAACTGAAATAGCAATTT
AAAAATAGCTAACAGGTAAACTAACATCATATTCAGATTCTACATATATTTCTAATTAAATTTCATATACAACATGTCAA
AATTGGATATAAGGTTTAAAATAT
>chr2D_1532
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------ATGTG
TGCACCTACGCAACACTCAGACAACATCTAAGCGGTGCCATTAAACACTGAGGAGGCTGCGTCTATGGATTAATAGTCAG
TTTGGTTGGTGTCCTCAACACTATGCCTGAGAAATTTTGATGCCTGGCACGGGCCTGAGAAACTGGAAAATATTGCCTGG
TCAGGCAAGTATAGCTAAACCCTATTTGGTTCACGACCTGGCCTGCTGAGTCCTTAAAAGTCAATTTAATGTCTGAAACA
GAGATTTGATTCCTTCCCTACTGCCTCATTCCTTGAGCCCTATAATTATTAAGCCCAGGCTGCTACTCCAGGCAAGCCCA
GGCGTCCAAATTCACATGCCTGGCGAGGCTAACCAACTTCCATCATTTTGGGGCCAGGCTAATTGCGTTGTCAGATTTTC
TGGCCAGGCTGGCTCTCTTGTCACCAGGATCTCAACCAAACAGGAGCTAGGAAACTCTCAGGGAGGCCCCAGGCCAGGCA
TCAAACATCCAGGACATGAACCAAACTGACCCTAAGTCCTATATGTTTCATCGTCACATGCAGCGAATGGAACACAAATT
AAGATCCTACATATTGGTTTCAATACTAATGTTCATGACTATCACAAGAACGGATTCAATATGCTTCATGACTTTCACAA
GAATTGTTTGGATATTTTCAAAATAAATATTCATCTACTTTTGATGTTTATGAATTTTATAATTGTATGTACATCCCATG
AAAATTGTTTGTGTATTTACTAAA-AAAAAGGAATT--GTGTAGCCCGTTGGTAAGTACGTGTGTGGATTTGGCCAAGAA
AAGGTACGTACGTAGGGTCTTAGGTG-TGGAACATGTACAAGAAAAGAACCTGATGCAAGTACAACATGCCGAAGGATTA
GAATGGCGTCATTATAATCATTTTACTCGCTCATTGCCAACC-------------AGCACACAAGCATACAACATGTTCG
CTTGAAATACGAATCAGGGCCGGTAGAAAGGAAGCCGGATCGTGCACCACTGATTAAGCTTGCAACTGAAATAGCACTTT
AAAAATAGTTAACAGGTAAACTAATATCATATTCAGCTTCTATATATTTTCTTAATTAAATTTCATATCTAACATGTCAA
AATTGGATATAGGGTTTAAAATAT
>SNPs
--S--------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSS--------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------S----------------------------------
------------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------S-----------S-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------S-----------------
-------------------------------S----------------------------S-------------------
--------------------------------------------------------------------------------
------S---------------S-------------------------------------------------S-------
--S--------------------------------------S---S----------------------------------
----------------------------S-------------SSSSSSSSSSSSS-------------------------
---------S-----------S------------------------S--SS--------------S--------------
-S----------------------------S--S----------------------------------------------
---------------S--------
>forward_491
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------GGATGGAGT
CGTCGCAGTAG---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
>reverse_3069
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------TCTCATTGCCAACCAGCACA--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
