>input_sequence_86718
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--------------ATGAGTTCCTCCGACGACCTCGCCGGTGGA---AAGAAGACTTCGTGGCCGGAGGTGGTCGGGCTG
ACCATCAAGGAGGCCAAGGAGATCATCCTGAAGGACAAGCCCGACGCCGACATTGTCATGGTGCCGGTCGGCTCCGCCGT
GACCGAGGACTTGAGGCCCAACCGTGTCCGCATCTTCGTGGGCACCGTCGCCGAGACCCCCCACGTTGGATAG-------
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-------------------------------------
>chr1D_1_TraesCS1D01G028000
CCAAACTCCGCCAGATCCAGCGACCAACCGCGGGAAGACAAGCGCAGAAGCGGAGGGAGCGAATTAGGGGCGGCAAACCT
CCAGATCTGGCGAGGAAAAGGAGGCCTCCACACTGTAGCCACCAGGCGCCGACGCCCCACCGCCCCCGCAGTCGAGGACG
CCAGCCAGAGCCCTCCGCGAGCGCCGTTCAGGGCTAACGGCGACGCCACGCCGGTAGGGGCCGCCGACCCTGGGATCCAG
ATCCTCCGCTGCAGGAGCGACGAGGGCCTCGCCGCCACCGTCACTGGCGGCCGCGCGGGCTTGCGCGGCGACCACCTCAG
GTGGCGACGAGGAGGGAGAGGAGGTGTGGGGGAGGCGGCGCTCGGAAACCCTAGCCGCCGCCCGAGTCGCCCGGTCAGGC
GACCGGTAAATAATATTATAGTAAGTCCATGATTTTCTGAAGACTACACTATAATAAGTTCATAGTTTTCTGGAGAGATA
ATATTATTATGCTTAATATCAATATATTATGATTTTAGAATACCTGAAAACATTATCTCTTATCGCGTACGTGGAAGTAA
GCATTCAAGACCATATCAATTCGCTAGCTATACCTGTAGGTTGCTTGCTTGACCC-AACTTAATGGATGTGTCCACGAAG
AAGCTTTGCATGCAAGTCGTGTGGCACGTGTACCTTGCTACTAGAACG-TACCAATGGAT-GGAAAATGAAGATGCTACC
TACTCGTAATCTCTCTACTATATA--------------------------------------------------------
-------------------------------------------------TACATTACTCGACCAATGTGTTGTGCAAATC
AAGTCCCACACACAGCGCAACT----TTT--GCTAGCCTGTCAATCATCGAATAT----CATCGGCCGTCCGCGCGTCCA
TCAGCTCGGAGAAGACCGTCCATCAATCGGTGAGTAGCAACTAGA-----TGTGCCTC---------AACTGATCTTCTT
GTTTAGTTTGTTGCTGAAATACCTCACTCC--GCCTCAATTAAGCTATCTCTGATTGATCGATCGATCTCAAGTTATCAA
CCGGTGCTGCGAAGATGAGTTCCTCCGACGACCTCGCCGGTGGA---AAGAAGACTTCGTGGCCGGAGGTGGTCGGGCTG
ACCATCAAGGAGGCCAAGGAGATCATCCTGAAGGACAAGCCCGACGCCGACATTGTCATGGTGCCGGTCGGCTCCGCCGT
GACCGAGGACTTGAGGCCCAACCGTGTCCGCATCTTCGTGGGCACCGTCGCCGAGACCCCCCACGTTGGATAGGTGGATA
GCTCTTGCTGGCTTGCTGTGGCCTGCATACATACATGCTGGCTCACGAATAAATGAATA-T--GGAGAAATAAAGAAGTA
TGCAAGTAATGTGTGCTTAATCGGTCCTTAAAGTGTG--CTTAATCGGTGTTGTGGCAATTTTTATTTTATTTTAACTCG
TTTTGCCAATTTGTATCGAACTATGTATTTGATGGCTACTTCGTATAATAATATGGATGCATGCACCATTTTGATGCAGA
GACCGGG-G--TAATCCTTCTTT----AAAAGAAATCGTGTGCTTGATCGGTCATTCATGTATGTGTATG--TGCCAAAC
TGGGAAGTTCCATCCAGGGTAGATTAAGACAAG---------------------------CATAATTAAATTTGTGCATA
TCTCAATGCCATGCATGTAACTTCCGAGCAATCCCAAGTTCACAGCTCAATTTTAATCAGC-AATTCTGGACA--GAAAT
ACCTTTCCCCTAAAAAGTTTAATCACTAATTCACTACCAAGAAAATATCCAAAAAAGAGAGATGTGTACGGTGTACGTAA
GGAAACGACCGAGCACCAAATGATGCTTCGTGTGCTTGCGCGTGAGGTCTGGTCTCACATCCTGAGATGGATCTTCCTGC
CGAACCA-------------------------------------------------------------------------
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-----------------------------------GACGTCGAGTGCTACCGGCGACGTCCTCACCTGGTGGTCTGCTCT
TCAGCAAGGCATCCCTCCCAAGCTGAGAAATGATGTCAGCTGGTTGATCCTCTGCTCGCTATGATGCATGTGCTTGAGAG
AAGCACAAGGGT----GTTCAAGAACACCTCTCTGCTTCATACATCAGTAGTTGATAAAATTCACC----AGCA-TTGCC
TTGAGTCACGGAAGGTGGGGAAAGATAGTCTTAAGCGAG--TAGTTACTTAGTGTTGCGATGACGGAATGGGAAGTTTGG
GCTGCCGTTTATGTGGTGGTTATTTGTATATGATTCTTACTTCCTATCTTAATATATGGGCACACTTATCTCATGCATTT
CTCAAAGAAAAAAA-AGATGTGTATATCATGTTTCTT
>chr1B_407
--------------------------------------------------------------------------------
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------TAAATGACATTACAGTAAGTCCATGATTTCCTGGAGACTACACTATAATAAGTTCATAGTTTTCTGGAGAGATA
ATATTATTATCCTTAATATTAATATATTGTGATTTTAGAATACCTGAAAACATTATCTCTTATCGCGTACGTGGAAGTAA
GCATTCAAGACCATATCAATTCGGCAGC--TGCCTGTAGGTTGCTTGCTTGACCCAAACTTAATGGATGTGTCCACGAAG
AAGCTGTGCATGCAAGTCGTGTGGCACGTGTACCTTGCTACTAGAACCCTACCA-TGGATGGGAAAATGAAGCTGCTACC
TACTCGTAATCTCTCTACTATATA--------------------------------------------------------
-------------------------------------------------TACATCACTCGACCAATGTGTTATGCAAATA
AAGTCTCACGCACTGCGCAA------CTCA-----------------------AT----CATCGGCCGTCCGCGCGTCCA
TCAGCTCGGAGAAGACCGTCCATTAATCGGTGAGTAGAAACTGATCTTCTT---------------------------TT
GTTTAGTTTGTTGCTGAAATACCTCACTCC--GCCTCAATTAAGCTAGCTCTGATTGATCGATTGATCTAAAGTTATCAA
CCAGTGCTACGAAGATGAGTTCCTCCGACGACATCGCCGGTGGA---AAGAAGACTTCGTGGCCGGAGGTGGTCGGGCTG
ACCATCAAGGAGGCCAAGGAGATCATCCTCAAGGACAAGCCCGACGCCGACATCGTCGTGGTGCCGGTCGGCTCCGCCGT
GACCGAGGACTTGAGGCCCAACCGTGTCCGCATCTTCGTGGGCACCGTCGCCGAGACCCCCCACGTTGGATAGATGGATA
GCTCTTGCTGGCTTGCTGTGGCCTGCATACATAGATGCTGGCTCACGAATGAATGAATA-A--GGAGAAATAAAGAAGTA
TGCAGGTCATGTGTGCTTAATCGGTGCTTAAAGTGTGTGCTTAATCGGTGTTGTGGAAATTTTTATTTTATTTTAACTCG
TTTTGCGAACTTGTATCGAACTATGTATTTGATGGCTACTTTGTATAATAATATGGATGCATGCATCATTTTGATGCAGA
GACCGGG-G--TAATCATTCTCT----AAAAGAAATCATGTGCTTGATCAGTCAGTTATGTATGTATATGT--GCCAATC
TGTGAAGTTCCATCCAGGGTACATTAAGACAAG---------------------------CCTAATTAAATCTGTGTATA
TGTCAATGCCATGCATGTAATTTCCGAGCAATCCCAAGTTCACAACTCAATTTTAATCACC-AATTCTGGACAGCGAAAT
ACCTTTCCTCTAAAAAGTTTAATCACTAATTCACTACCAAGAAAATATCCAAAAAAAAACAGAGAT----GTGTACCTAA
GGAAACGACCGAGCATCTAATGATGCTTCGTGTGCTTGCGCGTGAGGTCTCATCTCACATCCTGAGATGGATCTTCCTGC
CGAACCA-------------------------------------------------------------------------
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-----------------------------------GACGTCCAGTGCTACCGGCGACGTCCTCACCTGGTGGTCTGCTCT
TCAGCATGGCATCCCTCCCAAGCTGAGAAAAGGTGTCAACTGGTTGATCCTCCGCTCGCTACGATGCATGTGCTTGAGAG
AAGCACAAGGGTGTTAGTTCAAGAACACCTCTCTGCTTCATACATCAGTAGTCGATAAAATTCACCAGCGAGCA-TTGCC
TTGAGTAGCGGAAGGTGGGGAAAATTAGTCTTAAGCGAGTATAGTTACTTAGTGTTGCGATGACGGAATGGGAAGTTTGG
GCTGCCGTTTATGTGGTGGTTATTTGTATATGATTCTTACTTCCTATCTTAATATATGGGTACACTTGTCTCATGCATTT
CTCAAAGAAAAAAA-AGATGTGTATATCATGTTTCTT
>chr1B_407
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------TAAATAAAATTATAGTAAGTCCATGATTTTCTGGAGACTACACTATAATAAGCTCATAGTTTTCTGGATAGATA
ACATTATTATCCTTAATATTAATATATTATGATTTTAGAATACCTGAATACATTATCTCATATCA-GTACGTGGAAGTAA
GCATTCAAGACCATATCAATTCGCCAGC--TACATGTAGGTTGCTTGCTTGACCC-AACTTAATGGATGTGTCCACGAAG
AAGCTTTGCATGCAAGTGGTGTGGCACGTGTACCTTGCTACTAGAACG-TACCA-TGGAT-GGAAAACAAAGCTGCTACC
TACTCGTAATCTCTCTACTATATA--------------------------------------------------------
-------------------------------------------------TACATCACTCGACCAATGTGTTATGCAAATG
AAGTCTCACGCACAGCGCAAGTCCAACTT--GCTAGCCTGTCAATCATCGAATAT----CATCGGCCGTCCGCGCGTCCA
TCAGCTCGGAGAAGACCGTCCATTAATCGGTGAGTAGGAACTAGA-----TGTGCCGC---------AATTGATCTTCTT
GTTTAGTTTGTTGCTGAAATACCTCACTCC--GCCTCAAT---------------------------------TTATCAA
CCAGTGCTACGAAGATGAGTTCCTCCGACGACCTCGCCAGTGGA---AAGAAGACTTCGTGGCCGGAGGTGGTCGGGCTG
ACCATCAAGGAGGCCAAGGAGATCATCCTCAAGGACAAGCCCGACGCCGACATCGTTGTGGTGCCGGTCGGCTCCGCCGT
GACCGAGGACTTGAGGCCCAACCGTGTCCGCATCTTCGTGGGCACCGTCGCCCAGACCCCCCACGTTGGATAGGTGGATA
GCTCTTGCTGGCTTGCTGTGGCCTGCATACATAGATGCTGGCTCACGGATAAATGAATAATAAGGAGGAATAAAGAAGTA
TGCAAGTCATGTGTGCTTAATCGGTGCTTAAAGTGTG--CTTAA------------------------------------
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>chr1A_407
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------TAAATAATATTACAGTAAGTCCATGATTTTCTGAAGACTACACTACAATAAGTTCATAGTTTTCTGGAGAGATA
ATATTATTATCCTTAATATTAATATATTATGATTTTAGAATACCTGAAAACATTATCTCTTATCGCGTACGTGGAAGTAA
GCATTCAAGACCATATCAATTCGCCAGC--TACCTGTAGGTTGCTTGCTTGACCC-AACTTAATGGATGTGTCCACGAAG
AAGCTGTGCATGCAAGTCGTGTGGCACGTGTACCTTGCTACTAGAACG-TACCA-TGGAT-GGAAAATGAAGCTGCTACC
TACTCGTAATCTCTCTACTATATACTCCCTCCGTCCCGAATTACTTGTCGCAGGTATGGATGTATCTAGATGTATTTTAG
TTCTAGATATATCCATTTCTGCGACGAGTAATTTGGGACGGAGGGAGTATACATCACTCGACCAATGTGTTATGCAAATC
AAGTCTCACGCACAGCGCAA------TTT--GCTAGCCTGTCAATCATCGAATAT----CATCGGCCGTA----CGTCCA
TCAGCTCGGAGAAGACCGTCCATCAATCGGTGAGTAGCAACTAGG-----TGTGCCTCACAAGTCACAACTGATCTTCTT
GTTTAGTTTGTTGCTGAAATACCTCACCCC--GCCTCAATTACGCTTGCTCTGATTGATCGATCGATCTCAAGTTATCAA
CCACTGCTACGAAGATGAGTTCCTCCGACGACCTCGCCGGTGGA---AAGAAGACTTCGTGGCCGGAGGTGGTCGGGCTG
ACTATCAAGGAGGCCAAGGAGATCATCCTCAAGGACAAGCCCGACGCCGACATAGTCGTGGTGCCGGTCGGCTCCGCCAT
GACCGAGGACTTGAGGCCCAACCGTGTCCGCATCTTCGTGGGCACCGTCGCCAAGACCCCCCACGTGGGATAGGTGGATA
GCTCCTGCTGGCTTGCTGTGGCCTGCATACATAGATGCTGGCTCACGAATAAATGAATA-A--GGAGAAATAAAGAAGTA
TGGAAGTCATGTGTGCTTAATCGGTGCTTAAAGTGTG--CTTAATCGGTGTTGTGGCAATTTTT--------TTAACTCG
TTTTGCGAACTTGCATCGAACTACGTATATGATGGCTACTTCGTATAATAATATGGATGCATGCATCATTTTGATGCAGA
GACCGGG-GGGTAATCCTTCTTT----AAAAAAAATCGTGTGCTTGATCGGTCAGTCATGTATGTGTATG--TGCCAAAC
TGGGAAGTTCCATCCAGGGTAGATTAAGACAAG---------------------------CCTAATTAAATTTGTGCATA
TCTCAATGCCATGCATGTAACTTCCGAGCAATCCCAAGTTCACAGCTCAATTTTAATCAGC-AATTCTGGACA--GAAAT
ACCTTTCCCCTAAAAAGTTTAATCACTAATTCACTACCAAGAAAATATCCAAAAAAGAGAGATGTGTACGGTGTACGTAA
GGAAACGACCGAGCACCAAATGATGCTTCGTGTGCTTGCGCGTGAGGTCTGGTCTCACATCCTGAGATGGATCTTCCTGC
CGAACCA-------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------GACGTCCAGTGCTACCGCCGACGTCCTCACCTGGTGGTCTGATCT
TCAGCAGGGCATCCCTCCCAAGCTGAGAAATGATGTCAGCTGGTTGATCCTCTGCTCGCTATGATGCATGTGCTTGAGAG
AAGCACAAGGGTGTT----CAAGAACACCTCTCTGCTTCATACATCAGTAGTTGATAAAATTCACC----AGCA-TTGCC
TTGAGTCACGGAAGGTGGGGAAAGATAGTCTTAATCGAG--TAGTTACTTAGTGTTGCGATGACGGAATGGGAAGTTTGG
GCTGCAGTTTATGTGGTAGTTATTTTTATATGATTCTTACTTCCTATCTTAATATATGGGCACACTTATGTCATACATTT
CTCAAAGAAAAAAAAAGATGTGCATATCATGTTTCTT
>chr1A_407
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------TAAATAATATTATAATAAGTCCATGATTTTCAGGAGACTACGCTATAATAAGTTCATAGTTTTCGGGAGAGATA
ATATTATTATCCTTAATATTAATAGATTATGATTTTAGAATACCTGAAAATATTATCTCTTATCGCGTACATGGAAGTAA
GCATTCAAGACCATATCAATTCGCCAGCG--ACCTGTAGGTTGCTTGCTTGACCCAAACTTAATGGATGTGCCGACGAAG
AAGCTCTGCATGCAAGTCGTGTGGCACGTGTACCTTGCTACCAGAACG-TACCA-TGGAT-GGAAAATGAAGCTGCTACC
TACTCGTAATCTCTCTACTATA----------------------------------------------------------
-----------------------------------------------TATACATCACTCGACCAATGTGTTATGCAAATC
AAGTCTCACGCACAGCGCAA------CTT--GCTAGCCTGTCAATCATCGAATATATATCATCGACCGTA----CGTCCA
TCAGCTCGGAGAAGACCGTCCATTAATCGGTGAGTAGTAACTAGACTAGATGTGCCGC---------AATTAA---TCTT
GTTTAGGTTGTTG---AAATTCCTCACTGCATGCGTCAGTTGAGCTAGCTCTGTT-----GATCGATCTT--------AA
CCAGTGCGACGACGATGAGCTCCTCGGACGACGTCGCCGGTGGGTGCAAGAAGACTTCGTGGCCGGAGGTGGTCGGGCTG
ACCATCAAGGAGGCCAAGGAGATCATCATCAAGGACAAGCCTGACGCCGACATTGTCGTCGTGCCGGTTGGTTCGGCGGT
GACCGAAGACTTCAGGCCCAACCGCGTCCGCATCTTCGTCGGCACTGTCGCCGAGATCCCCCACGTTGGCTAGTTGGATT
GCCTTT----GCTTGCTGTGGCCGG----CATAGATGCTGGCTCATAAATAAATCAATAAT--GGAGGAATAAAAATGTA
TGGAAGTCATATGT------------------------------------------------------------------
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>chr7B_407
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------TAAATAATATTATAATAAGTCCATGATTTTCAGGAGACTACGCTATAATAAGTTCATAGTTTTCGGGAGAGATA
ATATTATTATCCTTAATATTAATAGATTATGATTTTAGAATACCTGAAAATATTATCTCTTATCGCGTACATGGAAGTAA
GCATTCAAGACCATATCAATTCGCCAGCG--ACCTGTAGGTTGCTTGCTTGACCCAAACTTAATGGATGTGCCGACGAAG
AAGCTCTGCATGCAAGTCGTGTGGCACGTGTACCTTGCTACCAGAACG-TACCA-TGGAT-GGAAAATGAAGCTGCTACC
TACTCGTAATCTCTCTACTATA----------------------------------------------------------
-----------------------------------------------TATACATCACTCGACCAATGTGTTATGCAAATC
AAGTCTCACGCACAGCGCAA------CTT--GCTAGCCTGTCAATCATCGAATATATATCATCGACCGTA----CGTCCA
TCAGCTCGGAGAAGACCGTCCATTAATCGGTGAGTAGTAACTAGACTAGATGTGCCGC---------AATTAA---TCTT
GTTTAGGTTGTTG---AAATTCCTCACTGCATGCGTCAGTTGAGCTAGCTCTGTT-----GATCGATCTT--------AA
CCAGTGCGACGACGATGAGCTCCTCGGACGACGTCGCCGGTGGGTGCAAGAAGACTTCGTGGCCGGAGGTGGTCGGGCTG
ACCATCAAGGAGGCCAAGGAGATCATCATCAAGGACAAGCCTGACGCCGACATTGTCGTCGTGCCGGTTGGTTCGGCGGT
GACCGAAGACTTCAGGCCCAACCGCGTCCGCATCTTCGTCGGCACTGTCGCCGAGATCCCCCACGTTGGCTAGTTGGATT
GCCTTT----GCTTGCTGTGGCCGG----CATAGATGCTGGCTCATAAATAAATCAATAAT--GGAGGAATAAAAATGTA
TGGAAGTCATATGT------------------------------------------------------------------
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-------------------------------------
>chr2B_407
--------------------------------------------------------------------------------
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------TAAATAATATTATAATAAGTCCATGATTTTCAGGAGACTACGCTATAATAAGTTCATAGTTTTCGGGAGAGATA
ATATTATTATCCTTAATATTAATAGATTATGATTTTAGAATACCTGAAAATATTATCTCTTATCGCGTACATGGAAGTAA
GCATTCAAGACCATATCAATTCGCCAGCG--ACCTGTAGGTTGCTTGCTTGACCCAAACTTAATGGATGTGCCGACGAAG
AAGCTCTGCATGCAAGTCGTGTGGCACGTGTACCTTGCTACCAGAACG-TACCA-TGGAT-GGAAAATGAAGCTGCTACC
TACTCGTAATCTCTCTACTATA----------------------------------------------------------
-----------------------------------------------TATACATCACTCGACCAATGTGTTATGCAAATC
AAGTCTCACGCACAGCGCAA------CTT--GCTAGCCTGTCAATCATCGAATATATATCATCGACCGTA----CGTCCA
TCAGCTCGGAGAAGACCGTCCATTAATCGGTGAGTAGTAACTAGACTAGATGTGCCGC---------AATTAA---TCTT
GTTTAGGTTGTTG---AAATTCCTCACTGCATGCGTCAGTTGAGCTAGCTCTGTT-----GATCGATCTT--------AA
CCAGTGCGACGACGATGAGCTCCTCGGACGACGTCGCCGGTGGGTGCAAGAAGACTTCGTGGCCGGAGGTGGTCGGGCTG
ACCATCAAGGAGGCCAAGGAGATCATCATCAAGGACAAGCCTGACGCCGACATTGTCGTCGTGCCGGTTGGTTCGGCGGT
GACCGAAGACTTCAGGCCCAACCGCGTCCGCATCTTCGTCGGCACTGTCGCCGAGATCCCCCACGTTGGCTAGTTGGATT
GCCTTT----GCTTGCTGTGGCCGG----CATAGATGCTGGCTCATAAATAAATCAATAAT--GGAGGAATAAAAATGTA
TGGAAGTCATATGT------------------------------------------------------------------
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-------------------------------------
>chrUn_407
--------------------------------------------------------------------------------
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------TAAATAATATTATCGTAAATTCATGATTTTCTCAAGACTACACTATAATAAGTTCATAGTTTTCTGGAGAGATA
ATATTATTATCCTTGATATTAATATATTATAATTTTAGAATACCTGAAAACATTATCTCTTATCACGTACGTGGAAGTAA
GCATTCAAGACCATATCAATTCGCCAGC--TACCTGTAGGTTGCTTGCTTGACCC-AACTTAATGGATGTGTCCACGAAG
AAGCTTTGCATGCAAGTCGTGTGGCACGTGTACCTTGCTACTAGAACG-TACCA-TGGATGGGAAATTGCAGCTGCTACC
TACTCGTAATCTCTCTACTATA----------------------------------------------------------
-----------------------------------------------TATACATCACGCGACCAATGTGTTATGCAAATC
AAGTCTCACGCACAGCGCAA------CTT--GCTAGCCTGTTAATCATCGA----ATATCATCGGCCGTA----CGTCCA
TCAGCTGGGAGAAGACCGTCCATTAATCGGTGAGTAGTAACTAGA-----TGTGCAGC---------AATTAG---TCTT
GTTTAGTTTGTTGTTGAAATTCCTCACTGCATGCGTCAGTTGAGCTAGCTGTGTT-----GAT-----------------
--------------------------------------------------------------------------------
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-------------------------------------
>chr1D_677
--------------------------------------------------------------------------------
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-------------------------------------CTACTAGAAGG-TACCA-TGGGT-GGAAAATGAAGCTGCTACC
TACTCGTAATCTCTCTACTATA----------------------------------------------------------
-----------------------------------------------T-TACATCACTCGACCAATGTGTTATGCAAATC
AAGTCTCACGCACAGCGCAA------CTTTTGCTAGCCGGTCAATCATCGA----ATATCATCGGCCGTA----CGTCCA
TCAGCTCGGAGAAGACCGTCCATCAATCGGTGAGTAGCAACTAGA-----TGTGCCTC---------AACTGATCTTCTT
GTTTAGTTTGTTGCTGAAATACCTCACTCC--GCCTCAATTAAGCTATCTCTGATTGATCGATCGATCTCAAATTATCAA
CCAGTGCTACGAAGATGAGTTCCTCCGACGACCTCGCCGGTGGA---AAGAAGACTTCGTCGCCGGAGGTGGTGGGGCTG
ACCATCAAGGAGGCCAAGGAGATCATCCTGAAGGACAAGCCCGACGCCGACATTGTCATGGTGCCGGTCGGCTCCGCCGT
GACCGAGGACTTGAGGCCCAACCGTGTCCGCATCTTCGTGGGCACCGTCGCCGAGACCCCCCACGTTGGATAGGTGGATA
GCTCTTGCTGGCTTGCTGTGGCCTGCATACATACATGCTGGCTCACGAATAAATGAATA-T--GGAGAAATAAAGAAGTA
TGCAAGTCATGTGTGCTTAATCGGTCCTTAAAGTGTG--CTTAATCGGTGTTGTGGCAATTTTTATTTTATTTTAACTCG
TTTTGCCAATTTGTATCGAACTATGTATTTGATGGCTACTTCGTATAATAATATGGATGCATGCATCATTTTAATGCAGA
AACCGGGGG--TAATCCTTCTTT----TTAAAAAATCGTGTGCTTGATCGGTCAGTTATGTATGTACATGTATGCCAAAC
TGTGAAGTTCCAGCCAGAGTAGATTAAGACAAG---------------------------CCTAATTAAATTTGTGCATA
TCTCAATGCCATGCATGTAATTTCCGAGCAATCCCAAGTTCACAGCTCAATTTTAATCACCAAATTCTGGACA--GAAAT
ACCTTTCCTCTAAAAAGTTTAATCACTAATTCACTACCAAGAAAATATCCAAAAAAAG--AGAGAT----GTGTACCTAA
GGAAACGACCGAGCACCTAATGATGGT-------CTTGCGCGTGAGGTCTGGTCTCACATCCTGAGATGGATCTTCCTGC
CGAACCA-------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------GACGT-------------------CCTCACCTGGTGGTCTGATCT
TCAGCAGGGCATCCCTCCCAAGCTGAGAAAAGGTGTCAACTGGTTGATCCTCTGCTCGCTATGATGCATGTGCTTGAGAG
AAGCACAAGGGTGTT----CAACAACACCTCTCTGCTTCATACATCAGTAGTCGATAAAATTCACC----AGCA-TTGCC
TTGAGTCAAGGAAGATGGAGAAAGATAGTCTTAAGCGAG--TAGTTACTTAGTGTTGCGATGACGGAATGGGAAGTTTGG
GCTGCCGTTTATGTGGTGCTTATTTGTATATAATTCTTACTTCCTATCTAAAT---------------------------
-------------------------------------
>chr1D_682
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------AGAAGG-TACCA-TGGGT-GGAAAATGAAGCTGCTACC
TACTCGTAATCTCTCTACTATA----------------------------------------------------------
-----------------------------------------------T-TACATCACTCGACCAATGTGTTATGCAAATC
AAGTCTCACGCACAGCGCAA------CTTTTGCTAGCCTGTCAATCATCCA----ATATCATCGGCCGTA----CGTCCA
TCAGCTCGGAGAAGACCGTCCATCAATCGGTGAGTAGCAACTAGA-----TGTGCCTC---------AACTGATCTTCTT
GTTTAGTTTGTTGCTGAAATACCTCACTCC--GCCTCAATTAAGCTATCTCTGATTGATCGATCGATCTCAAGTTATCAA
CCAGTGCTACGAAGATGAGTTCCTCCGACGACCTCGCCGGTGGA---AAGAAGACTTCGTGGCCGGAGGTGGTGGGGCTG
AGCATCAAGGAGGCCAAGGAGATCATCCTGAAGGACAAGCCCGACGCCGACATTGTCATGGTGCCGGTCGGCTCCGCCGT
GACCGAGGACTTGAGGCCCAACCGTGTCCGCATCTTCGTGGGCACCGTCGCCGAGACCCCCCACGTTGTATAGGTGGATA
GCTCTTGCTGGCTTGCTGTGGCCTGCATACATACATGCTGGCTCACGAATAAATGAATA-T--GGAGAAATAAAGAAGTA
TGCAAGTCATGTGTGCTTAATCGGTCCTTAAAGTGTG--CTTAATCGGTGTTGTGGCAATTTTTATTTTATTTTAACTCG
TTTTGCCAATTTGTATCGAACTATGTATTTGATGGCTACTTCGTATAATAATATGGATGCATGCATCATTTTAATGCAGA
AACCGGGGG--TAATCCTTCTTT----AAAAAAAATCATGTGCTTGATCGGTCAGTTATGTATGTACATGTATGCCAAAC
TGTGAAGTTCCAGCCAGAGTAGATTAAGACAAG---------------------------CCTAATTAAATTTGTGCATA
TCTCAATGCCATGCATGTAATTTCCGAGCAATCCCAAGTTCACAGCTCAATTTTAATCACCAA-TTCTGGACA--GAAAT
ACCTTTCCTCTAAAAAGTTTAATCACTAATTCACTACCAAGAAAATATCCAAAAAAAG--AGAGAT----GTGTACCTAA
GGAAACGACCGAGCACCTAATGATGGT-------CTTGCGCGTGAGGTCTGGTCTCACATCCTGAGATGGATCTTCCTGC
CGAACCA-------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------GACGT-------------------CCTCACCTGGTGGTCTGATCT
TCAGCAGGGCATCCCTCCCAAGCTGAGAAAAGGTGTCAACTGGTTGATCCTCTGCTCGCTATGATGCATGTGCTTGAGAG
AAGCACAAGGGTGTG----CAACAACACCTCTCTGCTTCATACATCAGTAGTCGATAAAATTCACC----AGCA-TTGCC
TTGAGTCACGGAAGATGGAGAAAGATAGTCTTAAGCGAG--TAGTTACTTAGTGTTGCGATGACGGAATGGGAAGTTTGG
GCTGCCGTTTATGTGGTGCTTATTTGTATATAATTCTTACTTCCTATCTTAAT---------------------------
-------------------------------------
>chr1B_1340
--------------------------------------------------------------------------------
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-----------------------------------------TAAGCGGTGTTGTGGAAATTTTTATTTTATTTTAACTCG
TTTTGCCAACTTGTATCGAACTATGTATGTGATGGCTACTTTGTATAATAATATGGATGCATGCATCATTTTGATGCTGC
GG----------AATCCTTCTTTTGAAAAAAAAAATCGTGTGCTTGATCGGTCAGTTATGTATGT--------GCCAAAC
TGTGAAGTTCCAGCCAGGGTAGATTAAGACAAGCCTAATTAATCTTCGCAAAAAAACAAGCCTAATTAAATTTGTGCATA
TCTCAATGCCATGCATGTAATTTCCGAGCAATCCCAAGTTTACAGCTCAATTTTAATCACCAA-TTCTGGACA--GAAAT
ACCTTTCCTCTAAATAGTTTAATCACTATTTCACTACCAAGAAAATATCCAAAAA-AG--ATAGAT----GTGTACCTAA
GGAAACGACCGAGCACCTAATCATGCTTCGTGTGCTTGCGCGTGAGGTCTGGTCTCACATCCTGAGATGGATCTTC----
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-----CTGCCGAACCAGACATCCAGTGCTA--GGCGACGC-------------------CCTCACCTGGCGGTCTGCTCC
TCAGCAGAGCATCCCTCGCAAGCTGAGAAAAGGTGTCAGATGGTTGATCCTCTGCTCGCTACGATGCATGTGCTTGAGGG
AAGCACAAGGGTGTT----CAAGAAAACCTCTCTGCTTCATCCATCAGTAGTCGATAAAATTCACC----AGCA-TTGCA
TTGAGTCGCAGAAGGTGGGGAAAGATAGTCTTTAGTGAG--TAGTTACTTAGTCTTGCGATGACGGAATGGGAAGTTTGG
GCTGCCGTTTATGTGGTGGTTATTTGTATATGATTCTTACTTCCTATCTTAATATATGGGCACACTTATCTCATGCATTT
CTCAAAGAAAAAAA-GGATGTGTATATCATG------
>chr1A_1682
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----------------------TCACTAATTCACTACCAAGAAAATATCCAAAAA-AG--AGAGAT----GTGTACCTAA
GGAAACGACCGAGCACCTAATGATGCTTCGTGTGCTTGCGCGTGAGGTCTGGTCTCACATCCTGAGATG-ATCTTTCTGC
CGAACCAAGTGAATTGCAAAAATAATCGACATTGAAGGCTGGGGTTGCAGAAACCACAATTCTACGGTTTTGTGCCAAAG
AAAATTAATTTTGCGCCTACTTTTTTTCGCAAAAAACACTAGTTGACTGCTTAGGCCATTTTGATGATGATTATGGTAGG
TGGACCCCCCTTTTGTTGACGTGGCGTAACAGTTCGGGTAGATATCGTTAGACGTTTTTCTTTCCAGAAAACTCCTTCCT
CCAAAAGCAAAACAACCAACTCCTCCCCCCATGAGTGCTCAGGCGGCCCGTCGCTGGCGGCCACTTGCCCCACCGCCGGC
AGCCCTGCTCACGCCATCGGCCCTCCCACCGCGGGCCGCCCAGAGAGGCGCTTGATCACGCAGCCGTCCAGGAGGCCCTG
GAGTCGCCCCAGCCGCTCCCTTCTCCTTCCTCCTCTTTCTCTCCCTTCTCTCCTCCCCGACACTATGGGAAACAGTTAAT
TTGCCGTCAGGAGGCATCTTTGCTGTAAGCCTTTTGTCGAGCAGACGGTACAAAAAGGGTTTGCCGTTATCAGCAGATGG
CAAAAAGAAAGCGTCAAAATATACTTTGCCGTCTGCGAAAAAGAAAAACATAAGGCAAAGAGCTTACTTTGCCATAAGCA
AAAAATCTACATACAGCAAAGATCTTTGTCGTCTGCGTTTCTTATTACGGACTGCAAAGTATGCCTGTTTGCCGTCTGTA
ATAATAAAAGCAGAAGACATAGTCCTTTCCGTCTGTAATAAAAAAGCAGACGGCAAAGTAAAGAAACACACCTCGCGGAT
CGATCTCCGGGATCGATGAGGTGGCACAATCTGTAGCGGCTCCCACCCGTCTCTCTCTCACCACACGATCTGTAGCGGGT
GGGGATATGTTGATGGGTATTGTGGTGCTCGTCATCATCCATTTGTTCCTCGTCGCCACTGCACTTAGACTGTTCGTTAT
CGATCTATAAAGATTGTAGCTGCCAACTTTTGATGGTCAGGTGTCCTGTGAATTTTTTAATTAAAAAATTCTTTGCCGTT
TGTATAGTAGATAGGCAGATGGCAAACGTTGGCTATTGGCTGACGGCAAAGTTGTAATCTCTGCCGTCTATTAATGGGAT
TGGCTGACGGCAAAGTCGTTGCCGTCTGCCCGATGAAAAGCTGATGGCAAAGTATTCTTTGCCGTCTATCTTTGCCGTTA
GTAGGCTGACAGCAAGCTCTTTGCTGTCTGTACTCGCCAGATGGCAAACTAGTGGATTCTTGTAGTGTGACCTCTGTCTC
ACTGCTGCAGGTTGTGCCGCCGGAACACGCAGCATGAGCTGCCCCGCCCCCCAAATCCTTGCCGCCTCGTCGGTCTTTGT
TGCTTCAGCTGCCCACCAACGGATCGACCTCTGCCGACGTTGAAAACTGTCAGATCTAGCGGGCATCATCGACCTCGAGC
AGGCCCGCCCGCCCGAGGGATGCCTTGCAGCCCACCCACACCAAGCTCTACCACGGCCATGGTTCCCTGCTATGCCACGG
CCAGTGGCGATGCCCCATGGGCACGTTCCTCCCAGACCCCGTCGGCACTGTCCCTCGCCGGCAAGGAGACCCCATGCGGG
GCGACCCGCCGTGTTGCAATGCGTAGGGCAGCTCATGAGTTCATTGCTTTTTTTGGTTTTTTCTGAAGGTTGTCTATGGA
AAATTTTAGGTTCATTGTGTAAATATGGGCAAACCCCCTGTCTAACGCCGTCTGTGTGGAACCGTCACACCACGCCAGCA
AAAGAGGGGCCCACTTGTCATAATCATCATCAAAAAGGCCTAAGCAGTCAACTAGTGTTTTTTGCAAAAAAGAGAGGCAC
AAAAGTAGTATTCTTTGGCACAAAACTGTAGAATTGTGGTTTCTGCAACTCTAGCCTTCAATGTCGATGTTTTTTGCAAT
TCACTCTGCCGAACCAGACATCCAGTGCAACCGGCGACGT-------------------CCTCACCCGGTGGTCTGCTCT
TCAGTAGGGCATCCCTCCCAAGCTAAGAAAAGGTGTCAACTGGTTGATCCTCTGCTCGCTATGATACATGTGCTTGAGAG
AAGCACAAGGGTGTT----CAGGAACACCGCTCTGCTTCCTACATTAGTAGTCGATAAAATTCACC----AGCTTTTGCC
TTGAGTCGCGGAAGGTGGGGAAAGATTGTCTTAAGCGAG--TAGTTACTTAGTGTTGCGATGACGGAATGGGAAGTTTGG
GCTGCCGTTTATGTGGTGGTTATTTGTATATAG-TCTTACTTCC------------------------------------
-------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSS--------------------------------------------------------------------------
----------S--------S------------------------------------------------------------
------------------------S---SS--------------------------------------------------
------------------------------------------------------S-----------------S-------
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------------------------------------------------------S----------------S--------
-----S---S----------S-----------------------------------------------------------
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--S-----S-----------------------------------------------------------------------
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-------S------------------------------------------------------------------------
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------------------------------------------------------S-------------------------
-------------------------------------------------------------S------------------
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-----------------------------------------S--------------------------------------
------S-------------------------------------------------------------------------
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>forward_125
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-------------------------CTCCACACTGTAGCCACCAG-----------------------------------
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>reverse_1586
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-----------------------------------------------------------------CCATTTTGATGCAGA
GACCGG--------------------------------------------------------------------------
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