>input_sequence_86704
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--------------------------------------------------------------ATGTCTCAG---------
--------------------------GAGGAGTTTGGGTTCACAAATGATGGGAGGATCACACTGCCTTGTGATACAGCG
GTGATGGAGTATGTGATGTGTTTGGTTAGGAGAGAAGCTTCAAAGGATGTTGAGAGGGCACTCCTCAGTTCCATAGTGAT
AGCTTGCCACCACCCAAGTAGAATGGTCCAATCACTCAGCGGACTTAACCAGCAATTTGCCGTGTGCAGCTCCTGA----
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>chr7D_1_TraesCS7D01G273300
CTTTGCCCGGCGAAGGCGAGGGGAGGAGGTGGGCGGAGAGGTAGAGACCGGCGGCGCTGGGGTGGCCCTCCCTATCGCCT
GCGGGAGG-----------GGAAGGGGGAGGTTTTTTTCGTGGAGCCCCCTCCCCA-CTCTCTCGCGGTGATTCTTCAAA
AGAAAAAGAACTTCGGAGGTCAGCCATAAGACCCCCTAAAGAGGCCTCGAGTAATGTTCTAATTTGTCTTGACAGCTCAA
ATGTGT--------------------------------------------------------------------------
--AAAGCATCTGAAGCCATGTAACCAAGAAACCTTATTTTGGGAATTGGTGGCCGTGATGGTCCGTCCATCCACACCTCG
CACATCTCTTTCCCACCCTTCAAGAAAAATCCCTATATGATCGATTATAAATTCTTTGTCCGTAGAAAGGATATTTTGCT
AGTAAGCTTGTTATGTCAGATCTAGAAAATTCTACAATGGCGCCTGGAA--TTTTTTTTACTTCTGTGTCAAAATACTCT
CAGCCCACAGATATGGCCAGCTACATACCAAGCCAGTAAAGATGTCCCACCATGTAACGATAATGGTCCAGTGCACTAAA
TCTTGCGGAAACATATAGCAACATCTCAACAAGGGAGTTCAAATGCCTTGTCCCTGGACAACTTGCTATCTTTGATGGTT
GTGGAACCAAAGATGCATACCCTCCCATCACACCCGGTTCCTGTAAATACATGCTCATGGCACAAACCATCAC-------
---CACACACAGACCCACTTTTTCCTCTGACCATTTCTTCTCAGAGTCACAACCCATCTTGGTAAAAAAACAAAACAAGC
GACCACGATCAGCTCCAAGAAGCTAGCTCAACTTTCCAAGAAGTGGCAGGCAGTGGGTGCTATCGGGCGAAGAAGGGCAA
CTATAGTGGGCAAGGAGA--TACACCCATCATGCAGTACAGTTGCAGACAAGGGCCACTGTGTTGTCTACTCTTTCGACG
GCAGGCGGTACAAGATCCCCTTGGTGTACCTCCGCGCAAGAGTCTTCCAGGAACTCTTGAGGATGTCTCAG---------
--------------------------GAGGAGTTTGGGTTCACAAATGATGGGAGGATCACACTGCCTTGTGATACAGCG
GTGATGGAGTATGTGATGTGTTTGGTTAGGAGAGAAGCTTCAAAGGATGTTGAGAGGGCACTCCTCAGTTCCATAGTGAT
AGCTTGCCACCACCCAAGTAGAATGGTCCAATCACTCAGCGGACTTAACCAGCAATTTGCCGTGTGCAGCTCCTGAAGAG
TGAAGAGTTTAGACCCACAGC--TTTTTCACCTTCCATCTTTTTTTGCC-AACTGTACACCTGGAGCGCGGTTTTGTGCA
ACGTTTTTCCAAAGGTACTGTGGATGCATGTAAAAAAATCACATCTTGAATAGAAACAAAGGAACCGAGCTTTCCATCAA
AATAGTAACAACTACTCAACCACTTCCTTAGATTCCACCAAAGATATATCGTGTATG------------CACCAAACAAA
AGTAAAATCAGAACTAATGGTCTAGTGAGCCTCTTAACCATTTGCAGGGGCAGTTGCCTCTTAATCGAGCTTTTGTTGAT
AAACCTACAAAGGATACTACTCCCTCCAGTTCACAAATAAGTGATCTTTTGGACATTGATGGTCTTCAAGATATAACTTT
GACCATTAGTTTGTATATAAAGATACCTAAGAAGATTATAGTATTCGGCTATTCGCCCATCCTATCGACCATTAGTTTGT
ATATAAAGATACCTAAGAAGATTATAGGATTCAGCTATTCGCCCATCCTATCGACCATTAGTTTGTATATAAAGATACCT
AAGAAGATTATAGTATTCGGCTATTCGCCCATCCTATCGAGAATACTGACCAGCGAGATGCAAAGAGCAGAGTAACACTT
TGAAGCAATATCATGCAGTTGTATGCCAGACTGAAACAGATACGCTATAATACTGTTCACGCTTTTCAGCTTCTGCCAAG
AGGTGGTACATGAGCAACTAAAACATTGTAGGTGTAGTTCAAAGTTGCAGGACTCCTGAGTGA-TCGGTTGATTGACTGG
TTCACCGTCGAACCGCCAGCTAAGCCGGTTCATTGTGGATGAAGAAAAGTCAAATTTAAATTTTGTTGGTGCGTTGCCAC
GGCCATTTGAAATATTTTAATGGTGTTATATATAAAAATAATGCATGTTAATTTTTACATGTAAAGAAATGATAGCCAAT
AACAATTGGGTAATAATTGAGATCCACTTCACTAGCAATGTAAGTTGATAAA
>chr7B_1
CTTTGCCCAGCGGCGATGAGTGGAGGAGGTGGGAGGAGAGGTAGAGACTGGCGGTGCTGGGCTGGCCGTCCCGGTCGCCC
GCGGGAGCGACGCGGGAACGGAGGGGGGAGTTTTTTTTCGTGGAGCCCCCTCCTCCCCTCTCTCGCGGTGATTCCTCAAA
AGAAAATGAACTTCGGTGGTCAGCCATAAGACCCCCTAAAGAGGCCTCAAGTAATGTTCTAATATACTCCCTCCGTTCTA
AAATAGATGACTCAACTTTATACTAACTTTAGTATAAAGTTAGTACAAAGTTGGGTCATCTATTTTGAAACGGAGGGAGT
ACAAAGAATCTAAAGCCATGTAACCAAGAAACCTTATTTTGGGAATTGGTGGCCATGATG----GTCCATCCACATCTCA
CACATCTCTTTCCCACCCTTCAAGAAAAATCCCTATATGATCGATTATAAATTCTTTGT---------------------
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---------------CACTTTTTCCTCTGACCATTTCTTCTCAGAGTTGCAGCCTATCTTGGTAAAAAAACAAAACAAGT
GACCATGATCAGCTCCAAGAAGCTAGCTCAACTTTCCAAGAAGTGGCATGCAGTGGGTGCTATCGGGTAAAGAAGGGCAA
CGATAGTGGGCAAGGAGAGATACACCCATCCTAAGGTACAGTTGCAGACAAGGGCCATTGTGTTGTCTACACTTCCGACG
GCAGGCGGTACGAGATCCCCTTGGTGTACCTACGCACAAGAGTCTTCCAGGAACTCTTGAAGATGTCTACAGAGGAGTTT
TTTTTTGAAACGGAGGCAAATCTACAGAGGAGTTTGGGTTCATAAATGATGAGAGGAA-ACACTGCCTTGTGATACAGCG
GTGATGGAGTATGTGATGTGTTTGCTTAGGAGAGAAGCTTCAAAGGATGTTCAGAGGGCACTCCTCAGTTCCATAGTGAT
AACTTGCCACCATCCAAGCAGAATGGTGCAATCACTCAGCGGACTTAACCAACAACTTGCCGTGT--AGCTCCTGAAGAG
TGAAGA-------CCCACAAC--TTTTTCACCTTCCATCTTTTTTTGCC-AACTGTACACCTGGAGCACGGTTTTGTGCA
ACGTTTTTCCAATGGTACTGTGGATGCATTAAAAAAAACAC---------------------------------------
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>chr7A_184
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-----------------------------------CTAAAGAGGCCTCAAGTAATGTTCTAATTTGTCTTGGCAGCTCAA
AAATGT--------------------------------------------------------------------------
--AAAGCATCTGAAGCCATGTAACCAAGAAACCTTATTTTGAAAATTGGTGGCCGTGATGGCACCCTCA--CACACCTCA
CACATCTCTTTCCCACCTTTAAAG-AAAATCCCTATATGATCGATTATAAATTCTT-GTCCGTAGAAAGGATATTTTGCT
AGTAAGCTTGTTATGTCAGATCTAGAAAATCCTACAATGGCGCCCGACATTTTTTTTTTACTTCTGTGTCAAAATACTCT
CAACCCACAGATATGGCCAGCTACATACAAAGCCAGTAAAGATGTCCCACCATGTAAGGATAATGGTCCAGTGCACTAAA
TCTTGCGGCCACATATAGCAACATCTCAACA-GGGAGTTC-AATGCCTTGTCCTTTGACAACTTGCTATCTTTGATGGTA
GTGGAACCAAAGATGCATAGCCTCCCATCACACCTGCTTCCTACAAACACATGCTCATGGCACAAACCATCAC-------
---CACACACAAACCGAC-TTTTTCTCTGATCATTTCTTCTCAGAGTCACAGCCCATCTTGGTAAAAAAATAAAACAAGC
GACCACGATCAGCTCCAAGAAGCTAGCTCAACTTTCCAAGATGTGGCAGGCA------GCTATCGGGTGAAGAAGGGCAA
CGATAGTGGGCAAGGAGA--TGCACCCATCCTGCAGTACAGTTGCAGACAAGGGCCACCGTGTTGTCTACTCTTCCGACG
GCAGGCGGTATGAGATCCCCTTGGTGTGCCTCTGCACAAGAGTCTTCCAGGAACTCTTAAGGATGTCTCAG---------
--------------------------GGGGAGTGTGGGTTCACAAATGATGGGAGGATCACACTGCCTTGTGATACAGCG
GTGATGGAGTATGTGATGTGTTTGCTTAGGAGAGAAGCTTCAAAGGATGTTGAGAGGGCACTCCTTAGTTTCATAGTGAT
AACTTGCCACCACCCAAGCAGAATGGTGCAATCACTCAGCGGACTTAACCAGTAATTTGCCATGTGTAGCTCCTGAATAG
TGA-------AGACCCACAAC--TTTTTCACCTTCCATCTTTTTTTTGCCAACTATACACCTGGAGCACGGTTTTGTGCA
ATGTTTTTCCAAAGGTACTGTGGATGCATGTAAAAAAATCACATCTTCAATAGAAACAAAATAATCGAGCTTTCCATCAA
AATAGTAACTACTGCTCAATCACTTCCGTAGATTCCACCAATTATATATCATGTATGCTATTTGCATTACACCAAACAAA
AGTAAA-TCATAACTAATGGTCCAGTGAGCCTCTTAACCATTTGCAGGTGAAGTTGCCCCTTAAT---------------
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>chr7D_561
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----------ACAGATAGGAACATCCCACCAAGGGAGTTCATG-GTCTTGTCCCCTGACGATTTGCTATCTATGATAATT
GTGGAAACGAAGATGCAGATT-TCCCACCAGACCTGCCCACTATAAATATATGATCATGGCACAAACCATCGACAGAA--
--ACACACACAGACCGACTTTTTTCTCTGATCATTCCATCTCAGAGTCACAGCCCATCTCCTTG---AAACAAAACAAGC
AACCATGATCAGCTCCAGGAAGCTAGCTCAACTTTCCAAGAAGTGGCAGGGCATTGGCGCCATCGGGCGAAG---GTTCG
CAACGTCAGACAAGGATA--TCCACCCATCATGCAGCTCAGTCGCAGGCAAGGGCCACTTCGTCGTCTACTCTTCCGACG
GGAGGCGGTTCGAGATCCCCCTGGTGTGCCTCCGCACAACAGTCTTCGAGGAGCTCCTGAGGATGTCTCAG---------
--------------------------GAGGAGTTTGGGTTCACAAGCGATGGGAGGATCACGCTGCCTTGTGATACAACG
ACAATGGAATATGTGATGTGTTTGCTAAGGAGAGAGGCCTCCCAAGATGTTGAGAGGGCACTCCTCAGTTCCATAGTGAC
GACTTGCCACCGCCCAAGCAGAGTGATGCAACCAAACAGCGGACTTAACCAGCAATTCGCTGTGCACAGCTCCTGAAAAA
TGAAGATCTTGCGGCTTCTTTCTTTTTTCAACTTCCATCTTTTTTTTCCCGGACGTACTTTTGGAGCACACTTCTGTGCG
GCTTTTTTCCAATTGTCCCGTGGATG------------------------------------------------------
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>chr7A_561
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----------ACAAATAGGAACATCCCACCAAGGGAGTTCATG-GTCTTGTCCCCTGACGATTTGCTATCTGTGATAGTT
GTGGAAACGAAGATGCAGATT-TCCCACCAGACCTGCCCACTATAAATATAGGATCATGGAACAAACCATCA------AC
ACACACACACAGACCGACTTTTTTCTCTGATTATTCCATCTCAGAGTCACAGCCCATCTCCTTG---AAACAAAACAAGC
AACCATGATCAGCTCCAGGAAGCTAGCTCAACTTTCCAAGAAGTGGCAGGGCATTGGCGCCATTGGGCGAAGAAGGTTCG
CAACATCAGACAAGGATA--TCCACCCGTCATGCAGCTCAGTTGCAGGCAAGGGCCACTTCGTTGTCTACTCTTCCGACG
GGAGGCGGTTCGAGATCCCCCTGGTGTGCCTCCGCACAACGGTCTTCGAGGAGCTCCTGAGGATGTCTCAG---------
--------------------------GAGGAGTTTGGGTTCACAAGCGATGGGGGGATCACGCTGCCTTGTGATACAACA
ATGGTGGAGTATGTGATGTGTTTGCTAAGGAGAGAGGCCTCCCAAGATGTTGAGAGGGCACTCCTCAGCTCCATAGTGAC
GACTTGCCACCGCCCAAGCAGAGTGATGCAACCACCCAGCGGACTTAACCAGCAATTCATTGTGCACAGCTCCTGAAAAA
CGAAGATCTGGCAGCTTCTTTCTTTTTTCACCTTCCATCTTTTTTTTCCCGGACGTACTTTTGGAGCACACTTCTGTGCA
GATTTTTTCCAATTGTCCCGTGGATG------------------------------------------------------
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>chr7B_561
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----------ACAGATAGGAACATCCCACCAAGGGAGTTCATG-GTCTTGTCCCCTAACGATTTCCTATCTATGATAATT
GTGGAAACCAAGATGCAGATT-TCCCGCCAGACCTGCCCACTATAAATATATGATCATGGCACAAACCATCGACAGACAC
ACACACACACAGACCGACTTTTTTCTCTGATTATTCCATCTCAGAGTCACAGCCCATCTCCTTGC---AACAAAACAAGC
AACCATGATCAGCTCCAGGAAGCTAGCTCAGCTTTCCAAGAAGTGGCAGGGCATTGGCGCCATCGGGCGGAGAAGGTTCG
CAACATCAGACAAGGATA--TCCACCCATCATGCAGCTCAGTTGCAGGCAAGGGCCACTTCGTTGTCTACTCTTCCGACG
GGAGGCGGTTCGAGATCCCCCTGGTGTGCCTCCGCACAACGGTCTTCGAGGAGCTCCTGAGGATGTCTCAG---------
--------------------------GAGGAGTTTGGGTTCACAAGCGATGGCAGGATCACTCTGCCTTGTGATACAACA
ATGATGGAGTATGTGATGTGTTTGCTCAGGAGAGAGGCCTCCCAAGATGTTGAGAGGGCACTCCTCAGTTCCATAGTGAC
GACTTGCCACCGCCCAAGCAGAGTGATGCAACCAAACAGCGGACTTAACCAGCAATTCTCTGTGCACAGCTCCTGAAAAA
CGAAGATCTGGCAGCTTCTTTCTTTTTTCACCTTCCATC-TTTTTTTCCCGGACGTACTTTTGGAGCACACTTCTGTGCG
GCTTTTTTCCAATTGTCCCGTGGATG------------------------------------------------------
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>chr7A_1531
ACCACAAAGGA---------------------------------------------------------------------
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-----------------TACTCCCTCCAGTTCACAAATAAATGATCTTTTGGATATTGATGGTCTTCAAGATATAACTTT
GACCATTAGTTTGTATATAAAGGTACCTAAGAAGATTATAGTATTCG---------------------------------
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---------------------------CCCATCCTATCGAGAATACTGACCAGCGAGATGCAAAGAGCAGAGTAACACTT
TGAAGCAATATCATGCAGTTGTATGCCAAACTGAAACAGATAGGCTGTAATAGTGTTCACACTTTTCAGCTTCCACGAAG
AGGTGGCACATGAACAGCTAAAAAATTGTAGGCGTAGTTCAAAGTTGCAGGACTCCTGAGTGAATCGGTTGATCGACTGT
TTCACCGTTTAACCGCCGGCTAAGCCAGTTCAATGTGGACGAAAATAAGCCAAATATTAATTTTGTTGGTACATTGCCAC
GGCCATTTGAAATATTT-AATGGTGTTATATATAAGCATAATGCATGTTAATATTTACATGTAAAGAAACGATAGCCAAT
AACAATGGGATAATAATTGAGATCCACTTCACT-------------------
>SNPs
------------SS-SS---S------------S--------------S-----S------S-----S----SS-----S
-------S--------------S-------S----------------------S-S------------------S-----
------S---------S-------------------------------S----------------------S--------
-SS-----------------------------------------------------------------------------
-------------------------------------------------------------SS----------------S
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------------------------------S-------------S-SS--------------------------------
--S-------------------------S----------------------------S----------------------
--------SS---------------------------------------------S------------------------
-------------------S--------------S-S-----S-------------------------------------
---------------------------------------------------S----------------------------
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-S------------------------------------------------------------------------S-----
-----------S-----------------------S--------------------------------------------
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------------------------S-------------------------------------------------------
-S----------------S--------S----------------------------------------------------
------SS-----------S-----------------------------------------------S------------
-----------------------------------------------S------------SS--S---------------
---------S---S-----S-------S-------------SS-------S-----------------------------
------S---S-----------S-------------------------S-S-------S------SSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSS-----------------------S------------S--------------------------
----------------------S------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------------------------------------
----------------------------S-------------S---S-----S-------S------------SS-S---
------S------S--S------S--------S----------------------------------------S-----S
--------SS-------S--------S-----S------S---S-S---S-----S-S------------S-S-------
-----------------S-----------------SS---------------S----------------S----------
------S--S-----------------------SSSSSSSSSSSSSSSSSSS
>forward_155
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-------------------------------------------------------CACTCTCTCGCGGTGATTCT-----
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>reverse_2154
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-------------------------------------------------------------------------TGACTGG
TTCACCGTCGAAC-------------------------------------------------------------------
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----------------------------------------------------
