>input_sequence_86692
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-ATGTTGCCGCCGGCGACGCTGTTCGCGGTGGGGTTCATGCTCTGCCCGTTCCCCGCCTTGGTGCCGTCCGGCCGTAACC
TCACCGCGCTGCTGCCGGAGCTCTGCGACCTCCTCGGCTCCCTCTACTGCCACGTCCGGGACGACCTCGTCCTGCCGCTC
ACCGTCGCGGTCACGGCCCCCCGCCGGCGCCCACGGTGGCGCTCTTCGAGATACCGATGA--------------------
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>chr5B_1_TraesCS5B01G040500
CACCACCAGAGAACTTTGTCAAAATACAAGTTGATGCGGGTGTTAGGGCCTCAAGAGGAGGATCAGCGGTAGCGGTATGC
CGTGACAGAAATGGGACCTTCCTGGGAAGTTCTGCACTGGTGATTGCTGGAGTGGCGGATCCAGCTACCCTGGAGGCGAT
TGCTTGCAGAGAGGCCATTGCTTTGGCTCAAGATTTAAATGTGCAGCAAGCTATGATCACTTCCGACTCGAAGCAAGTCA
TTGGAGATATCCATGGAGGGAACAAAGGACTCTATGGTCCGATCATTACCGAAATTAAAGCTGGAGCCTCTCTTTTGAAT
TGTAATTTTTCTTTCGAGGGTCGTGCAACCAATATGGATGCACATAGATTAGCTAAGTTTGCTTTATCCTTAGTTCCGGG
GCGTCATGTATGGCTTGGCCAGCCTCATCCCCCGACTCGTATCCCACACGTTGTGATGTTTGATTAATAAAGTTGGTTTT
ACCCCAAAAAAAACTGGGGCATAAAGCGCCGAATAGGAAATGCAGGGCGATGGTGGCC----------------------
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----------------------------------------------------------------ATCGGGCGCAGTCC-T
CTTCAGTTCTTCTGGCCTGAATATGAACGTCGTATTTGTTCCCTAAAAAACAAAAAAGAACGC-CGTGTTGTTATTTTAC
ATTTTTGGTCACCAGCAA--------------------------------------------------------------
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------------------------------------------------------------------------------TA
TCTTTTTCCATTCGCAAAAAAGGAAAAATCCTTTTCCGTTGCATAAGAAACAGCAAAAGATAAATGGCACTTGGCACTGG
ACGCACATCAGA---------------CATCACCATACTCTGGTGTTACTCTCGTAGGTAGGCATCACCTCGACTGGTTA
TGCTCCGGGCCAGCGCCTCGCACAACGATGGCCACGC------------------------GAAACGCAGCTAACTTTCT
CCTCACCTGCGAGTCAAGCACGCCCTCACCCAACCCAATGAATAACGACGACCCTCTCACCTCTATATACT-ACACACTG
ATTGCCTTCAACAGCATCGCGGGGATACTTCA-------------CACAACACGAGTGCAAAATCGGTCGTCGAAGCGTC
GATGTTGCCGCCGGCGACGCTGTTCGCGGTGGGGTTCATGCTCTGCCCGTTCCCCGCCTTGGTGCCGTCCGGCCGTAACC
TCACCGCGCTGCTGCCGGAGCTCTGCGACCTCCTCGGCTCCCTCTACTGCCACGTCCGGGACGACCTCGTCCTGCCGCTC
ACCGTCGCGGTCACGGCCCCCCGCCGGCGCCCACGGTGGCGCTCTTCGAGATACCGATGAAAACTTGTACTGTATCTCAG
TTCTCTCATATATACTCT----CTTGGATGCATGATTATGTGCATGATGGTGTACTCGTG-GTTCTAGTAGTATGTAAAG
AATGT-----ATCAAATGTGCTAGTAATTGGTTCTTCGTAGTTCTCACTA--------CGGTTTTGTTCTCAAACTGCCA
CACTTTCCTTTGACTGTTTACATTCAGTACGTGCGGTTTGGTAGGTTCTCCGTTCATTCTAATTGCAACTAAATTAATTT
CAATTTA-------------------------------------------------------------------------
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--TAGATCCCTAGAAAAAAATCGTAGAGCAAAACTAAGAAGGCTATAAC-TTGTTTCGGCTAACATTTCAAATTTCGGGT
TTAATGTTAACATCGGTTGTGTACCTAGGTTTGAGCAGTGAGGATCTTGTTCTTTTTATTTGGAATTCCAGGGAAATTAA
AAGAGGCACGCAAGCTGCCAGAACGGTGCACATATTTCGCTTGTGTTAGGTTCCTCTCCTCTGGATCTAGGGATCATTTT
TACTTTTTTCGCAAATACGCTCGAAAGTCTATCATTCCATTGATAGAAGAGGGGAAGAATACAAAGTTAGTAGTTCCAAA
ATGCCATGCACAGAGAGAGGCGGCATTTGGGATACCGTTGATCCGGAGAAGGGGGTTGCTCAGCCCCAATACACATAGAT
CAGGCTACGTGAATGATCCTATCTAGTCGAGTAAATAGCATAAACTACTACTTTACATGCCAGGGTTTCAAAAAACTACT
GATTTTTAATTTTTCTCAGATAACTATGAAATGGGTAGTAGGCTGTTTCAAAAAATCCAAATCGTCGAGTCTTTATCAGT
TGATCACGATTATGATAGGTCGGGCCCACACCTAAACAAACCATTAGTTTGATCTTAGTTTGACCATTAACTTACATGTG
GGGCCCACATGTAAGTTTCCTCTTCCTCTTCTCTTTCTTCTTCCTCTCTATCTCTTCTCTTCCCTGCTCTGTGGCTCCTA
TGCTAGACCTCTCCCCTCCCGAGCCGGCGACCCC
>chr5D_492
AACTGGC-------------------------------------------------------------------------
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------------------GCATAAAGCGCCGAATAGGAAATGCAGGGCCATGGTGGCCTCCCTCGAGGTGGCCATTGGGC
GTAAGGATGGCAATGGGTCGGGTTTAGATCGGGTTGAACAATATCAAATCCATATCCATATGCATGATGACACTCTTTGC
CCGCCCATGAAAAAATCCACGGATGTAAAGTTGTGTCCATATCCAAACCCGATGGATATCCATACCCACTGGATATCCAT
TGGGTCTTCTCAAGACATATAAATAAGACATAAGACAATGTTAACATAATATTTTTCCATTCTTCACCTCGTGGCAAGCT
AGGCTTCACTTATTGTAAACATCAACTTATGGTAAATCAACGTCCACTAACAACCTAATATCATTTAGTATTTTTTTAAA
AGATGAGAATGACGAGTCATTTTAACTAGGAGATAAAAAATAAAGGAAGAGGCGCTGGAGTATGCCAGCGGGGATTGAAT
GTCAACTAATAAAAGTTACGGTGGGAATTGTGCAATTTATTTTGCATGTTTTACATAAAAAGGTGTAAAATTGCAGTGGG
ACATGTGACTGTGGGGTAGGGATAGTAGATTTTTGCCCATTAATGCATACTATCGGGTCGGGTTTGAGTATATCCGCGGG
CACAAGATTATATCCATGCCCTACCCACGAGCAATCGGGTCGGGTTTGGGCACCGTCCATGGGCACAAAAGCATATCCAA
ACCCTATCCATTTGGGTCGGATATCCATGGGTATCCATGTCCATGGGTAAAATTGCCATCCTTAATCAGGCGCAGTCCTT
CTTCAGTTCTTCTGGCCTGAATATGAACGTCGTATTTGTTCCCTAAAAAACAAAAAAGAATCATCGTATTGTTATTTTAC
ATTTTTGGTCCCGGTAATACTCCCCCGTCCCAAAATAAGTGTCTTAACTTTGTACTAACTTTAGTATAAAGTTGTACTCG
AGTTTTTTTTCGAGAGTATGCAAATTGTGTACCTTAACTTTATAGAAGGAGAGAAGAACAAATCTACAACAATATCTACC
ACTCGCTGCGAACAACGAGCGTAGCAACACCACAGACAACACACACAACTACGATGCCAATGAGCCTACCCAAAACCGCG
AACCTCGCCGCGTCTCGACCAACACCGGTCATCTCCGAAGAACAGTAACTCCAGCTTCTTTGGATAAACCAGCAACGACC
GTACATAGCGCCTGAAAGGAGCTATCCGGGCAGCCGCGAACACCGGAGGAGTGCAACAAAGGGCCTCTCGTCTCCCAGCA
CAATGCTCTCAATAGAGGAACGGCCTCAAAGACACCGCCATCATGCCGATCCTGCGAATCAAGGCTTTCGCCCCGGAGAC
AATTGCCGCCACCGGGCAACGAAACAAATGGCAACACACACGGCGACGCCTCCAGAAGGGAAATGACATCCACGGATGCC
ATCGACGCCGGTCCGACCAAAGCCGAACAGGATTTTTATCCGTAGCGCTGCACATCTCCACGCCGCCAAGATCATGGCCA
GCCCTGACCGAAGCCTCGCACCGCTGTCGCAGCAGCAACATGACATCGAAGCCACACCAACGAGAACCACTCCAACCTCA
CTGCCGAGGGAGGACGCCTCAAGCCACCGCCTGCAACACAAACGAAGAACCGCAGCATCCACCGAGCGGTGCAAGGACCA
AACCACCACGACGACCTTCGCCCGCACCAGGGGACTGCCAACCTATCCGATCTGACCCGCACCTCGAACCACTCTCCGGC
ACCAACTACGTCGAGGCCTCACCGCGCGCCTCACACGGCTGCAGCCGAGCGCCCGCTGCCTGCCAGGACCCTTCCTAGCA
GGGCCTCGCAGCGCCGCCGCCTCCATGGCTGCGCTCACGCCGCCGCCACGAACGGTGCCGGTGCACCACCAACTCCTACC
AGCCTGTTGCGCCCTACGCCAGGCTCCAGACGACCGCCGCCAGCACACACACCCCGCTGCGAGCCCCGCCCCCGCGTCGT
TGCTTCACAGGCAACTCCACTGGACGTTGCCACTGCCCACTACCACCACCGCCGGACAGGGCTGCCACCGAAGCCTGGAC
GCGCCGCGCCTCCAGGAGCTCCGCCGGACGAGATCCCATCTGAGGTAGGGAGGAGAAGTCGCGCCGCCCGACACCGCTGT
CACCCAGCACCACCGGACGAAGCAGAAGCCCACCACCACCTCCGCTGAACAGGGCTACCACCAGAGCCTAGGCGCGCCGC
GCCGCCAGAAGCTCCGCGGACGAGATCCCGTCAAGGGAAGTGAGGGGGAGCCGCACCGCCGACCACCGGTGCCGCTGCGC
GACAACATGCGCCAGATCTGGGCCGCCCGAACACCTAGCGCCCATGCCCGACACCTTCTTGCACAACCAGGCCGTGCCAC
AGCGCGCCCACCAGGCGCAATCACCCCGCTCACCGCGCGCCCTCCAGGCGCCAGATCCACGCGCGTCCGCACCGCGACCT
GCGGGCCCGAGCCAACCAGCGCCGCGACGCCGTCTTGTCGCGCAGGCTCGAGCACGCGCGTCCACACGAGCTCCTCCGAG
ACCAACGGCCCGCGCCGCCTTCCCCCGAGACGGAGGTGGATAGGGCCCCGCCGCCGCCAGGCCGCGCGGGCTTTGCCCAG
CGACCCGTGCCGGCGGCGGCGAGGGGAGAAAGGTTGGTGGAGTGGTGCTGGCGGCGACGGCTAGGGTTTACTCCCGGGCC
GCCCGCGGGAGCGACACGGGAGTCGCTCGAGGGGCAAGTTGTACTAGAGTTGAGACACTTATTTTGAGACGGAGGGAGTA
TCTTTTTCCATTCGCAAAAAAGGAAATCTCCTTTTCCGTTGCATAAGAAACAGCAAAAGATAAATGGCACTTGGCACTGG
ACGCACTCGGCAGAGCCATGTAGACATCATCACTATACTCTGGTGTTACTATCGTACGTAGGCTTCACCTCGACTGGTTA
TGCTCCGGGCCACCGCCTCGCACAACGATGGCCACGCGAATCGGAGCTGCCCAGGGCCCATGAAACGCAGCTAACTTTCT
CCTCACCTGCGAGTCAAGCACGCCCTCACCCAACCCAATGAATAACGACGACCCTCTAACCTCTATATACT-ACACACTG
ATTGCCTTCAACAGCATCGCGAGGATACTTCA-------------CACAACAGGAGTGCAAAATCGACCGTCGAAGCGTC
GATGTTGCCGCCGGCGACGCTGTTCGCGGTGGGGTTCCTGCTCTGCCCGTTCCCCGCCTTGGTGCCGTCCGGCCGCAACC
TCACCGCACTGCTGCCGGAGCTCTGCGACCTCCTCGGCTCCCTCTACACCCACGTCCGGGACGACCTCGTCCTGCCGCTC
ACTGTCGCGGTGACGGCCCCCCGCCGGCGCCGACGGTGGCGCTCTTTGAGATACCGATGAAAACTTAC-----ATCTCAG
TTCTCTCACATAGTCTCTTGAACTTGGATGTATGATTATGTGCATGATGGTGTACTCGTG-GTTCTG---GTATGTAAAG
AATGTATCAAATCAAATGTGCTAGTAATTGGTTCTTCGTAGTTCTCACT-------------------------------
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>chr5A_668
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---------------AAAAAAGAAATGTCCTTTTCCCGTTGCATCAGAAACAGCAAAAGATAAATGGCACTTGGCACTGG
ACGCACTCGGCAGAGCCAAGTACG---CATCACCATACTCTGGTGCTACTATCGTACGTAGGCTTCACCTCGACTGGTTG
TGCTCCGGGCCACCGCCTCGCACAAGGATGGCCACGCGAACCGGAGCTGCCCAG--CCCCTGAAACGCAGCTAACTTTCT
CCTCACCTGCGAGTCAAGCACGGCCTCACCCAACCCAATG-ATAACGACGACCCTCTCACCTCTATATACACACACACTG
ACTGCTTGCAACAGCATCGCGAGGATACTGTGGCTTGCTACACTTCACACAAGGAGTGCACAAATCGAT-------CGTC
GATGCTGCCGCCGGCGACGCTGTTCGCGGTGGGGTTCCTGCTCTGCCCGTTCCCCGCCTTGGTGCCGTCCGGCCGTAACC
TCACCGCGCTGCTGCCGGAGCTCTGCGACCTCCTCGGCTCCCTCTACACCCACGTCCGGGACGACCTCGTCCTGCTGCTC
ACCGTCGCGGTCACGGCGCCCCGCCACCGCCGACGGTGGCGCTCTTTGAGATACCGATGAAAACTTGTACTGTATCTCAG
TTCTCTCATCTATACTCT----CTTGGATGTATGATTATGTGCATGATGGTGTACTCGTTAGTTCTG---GTATGTAAAG
AATGT-----ATCAAATGTGCTAGTAATTGGTTCTTCGTAGTTCTCACTGTATGCGTGCGGTTTTGTTCTGAAACTGGTT
CACTTTCCTTTGATTGTTTTCATTCAGTACGTACGCTGTGGTAGGTTCTCCAGTCATTCTAA---CAACTAAATTAATTC
CAATTTGTTTTTTTTAATTTTTTTTATTTTTTTAGAAAAGGAGGATGACCCCCGGCTTCTGCATCTGGGCGATGCATACG
GCCACTTTATTAATTATTCTCACAAGACTTTACAAAGTAATACAACAGTAAGACTAAAGCCGCCGTCTAAGTCACTCTAT
CCAGTTGATGAAGGGGCGCAGATAGCCTGGGCCTAATACCAAACAGGCATCGCAGCCAAACCTAACATCTAAGACCTGAG
ATCCCATCCAGGATGCCTGCCGGGCATGGGTCTCACCGGTCCGGCGTGCACTCAGAGGCCGCCGCCACCAACTTCCACCG
CTCCATCTTCAGAATTGTACTAATGCATCAACCTTGCTCGGTCCAGCTATCGTCGACGCCACCACGGCGCCCAACGGCAC
CTCCTCCCTGCGCGCAAACATCTGAGGACGCCGCGGTCGCTACTGATACACCTCAGCACCATGCTGCCAAGTACCACCAG
CCGACACAGCTTGAAGTCTTTGGAAGATCTGTCGTGCGTAGCACCTGCCGACCAGGCATGACAAAGCGTAGCACCTGTCG
GTCAGGCATGACTTGACATCTCCACCGAAGCTCCGTGCAAGATGAAGCCGCTCCACCTCCAGCCTTTCTGAACGGGATGG
GAGCACCCCAGGAAGACACGGCGAAGAGTTGGGCACCACAATCACCACGAGAGCCGGACCAGCCGACCGCCATGGCGAAG
CGACACCACTAAAGAGAACCGCCGCCATCAGGAACGCCAAGAACGCGTTGCAGCTGTCCCACCTCCCCGCGGACCCAAAG
CGGCGCCTTCAAGAAGGTGACGGAGCCGGGCACCGCCGCCGCCCAACCAAAGTTGTGGGTTTTCACCCGGGTGCAGGGGG
AGGACGAGGGGGGGGGGCTGGATCTCGAAGCCGCCTTCAAGAAGGAAACAGCGCCTGGGGCGCGGCCGGCGTCGTGGCCG
CCGTAGCCGGCCAAGAAATTACTCCGATCCAGAGATCCCAACCCCACATCCGCGCAGTCCGCCACCGGATCCGGCCGGAT
TGACGAAGAGGAAGCAGCATCGCGGGGGCGTCGTCTTCAAATCTGGCGAAGGAGAGCAGCAGGGGATCCCTCCACGTGGC
GCCCGCATCCACCGCCAACTCGCCGCCCGCGCGGCCGAGAAGACGCGGTCCACAACTTCGGCGAGCGCGGCCCGCCTCCC
GGACGACGCCGCCCTCACCAGCAGAGGCCGCCGCCTCAAACCCTATGCCCGGGCCGGACGGATCTGGCGGATCCGATCCA
TGCACCTGCCCGAGCGCGAGAAGCTCCCCGCCGCCACCTTCCTTGGCTGCGCCCAGGGCCTGCCCGGCGCTAGCCTCTGG
CAGCGGCGAGGACAGGAGGAACGTGGTGACGACGAGGGGCGGCGGCGTGAGATCGCCCCCGTGTCGCCCTAATTCCAATT
TGTAGATCCCTAAAAGAAAATCGTAGAACAAAACTAAGAAGGATATAACTTTTTTTCTGCTAAAGTTTCAAATTTGGGGT
TTAATGTTTACATCGGTTGTCTACCTAGGTTTGAGCAGTGAGGATCTTGTTCTTTTTACTTGAAATTCAAGAGAAATTAA
AAGGGGCATGCAAGCTCCCAGAACGGCGCACATATTTGGCTTGTGTTAGGTTCCTCTCCTCTCGATCTAGGGTTTTTTCT
TTCTTTTTCACGAATATGCCTCGAGAG-----------------------------------------------------
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>SNPs
S--SSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSS------------------------------S-------------------------------
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-------------------------------------------------------------------S------------
------------------------------------------------------------SSS----S------------
----------S-SSSS-S--------------------------------------------------------------
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--------------------------SS----------------------------------------------------
------SSSSS---------------------------------------S-----S------S----------------
------------S-------------------------------------------------------------------
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---------------------S------------------------------S--------------S------------
-------------------------------------S------------------------------------------
-----------------------------------------------SS-------------------------------
-------------------------------S--------------S---------------------------------
------------------------------S-----------------------------------SSSS----------
-------------------------------------------------S--------------------S------SSS
-------------S-----S------------S--S-S-------------SS---------SSS--------------S
------S-------------------------------------------------------------------------
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------------S--S-----------S--------------S---------S----S-----SS----------S----
--------S-----------S-------------------------------------S---S-----S--S--------
---S----S-------S---------S----------S------------------------S---------S-SS--S-
-S------SSSS--SSSSS-----S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_178
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TGCTTGCAGAGAGGCCAT--------------------------------------------------------------
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>reverse_6171
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----------TATGATAGGTCGGGCCCACA--------------------------------------------------
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