>input_sequence_86640
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--------------------------ATGGGCGCGAGCGTGGATCGACGTCGCCGTTGTCCGCTCCTCTTCTGCTACTGC
TCGGACGCG-AACACAAAACTCAGTCGCCGCCGTCCGCTCCTCCTC----GCCTCAAGGATGCGAGCACATGCCGCCGTC
CGCCGGTTGCCGCTCTCCTCTGCCGCCTCATGGATGCAAGCGAGGGTCTCCGGCACCATCGTCCGCTCCACCTCTGCTGC
CCCACGGACATGA-------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------
>chr6A_1_TraesCS6A01G062400
TTGAAGCGGTGTTGTGACAAGATTG-CCCATATACCGGTTTCCGACGAGTAAACACAGGCGGCCGCTTGCGTAATTTGTC
TTTCACTGAT------GCCTACCAAAGCAACATGGAAGTGGAGGACGTCTCCGGCGGAGCAAAGCACCGCGCCATTGATT
GAGGATTTATCCATGTCGAAGCCTGGGGGAA-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------CGGTTATGCGGTGCCGGTCGCCAATGACGGG
ATCCCAAACAAGGAGTTGGAGACGCTTCCAAAGAAAGATGAGTACAAGGCCATGGCGGCATCCAAGATAGACGATGCGCC
CCCCG---TCTTCGTGTT------------GCGATGAGAAGCGCTCGGGCAAGACACGATCCGGGGCCTTGAGGGAAGGC
GCGGAGGAGAGCCTGTCGTCTAGCTCTAGGAAGAAACCGAGGAGGGGAGGGTTGTGGCGATGGTGGTGGCGGAATCGGCG
GCAGAAGCCTGGATCGAAGACGAGGTCGCGTCAGCGCTTGCAGACGAGGGATGCGCGGGGGAGGGAGGACGGCTGTGGGG
GGAGGCGGAGGAGGATCTCGGAGAGGAGGTTGTCGTCCTCCAGCGGTGGCACCGCCGCCG---GCGAGGAGTGGCGGCGG
CGGA---GGTTGCTCATCTCGCCCTATGATATGGGATGCTTTTTTTTCTATCTATATCTATATCTATACTTCTATA--TC
TATATTATTATTAAAAAAGCAAACCTGAATTCCCCAACAGACACGCCACAAAGTGTACACAGAATCATCAAAAACGTTGG
ATTAATCCAACTAAATCATATCTAACAATCCATATTACATCAGGGGTCTATCACATAAATGAACGATGCAGATTAAATCT
TCTGCC--AGCAGACGCTCCT-------CC-TTCGTCCTCAATTAAT-GGGATAGGGGATTTCTATCCCGTAATCTTCTC
CCT-CCCTC-ACAACATGCCGTCTCTCCTCC-TCT--TGCCCCACCGATGCGAGAGCAGATCGCC-GCCA-CCGCCCACC
GCTCCTCCTCTGCTGGCTGCTGCCCCATGGGCGCGAGCGTGGATCGACGTCGCCGTTGTCCGCTCCTCTTCTGCTACTGC
TCGGACGCG-AACACAAAACTCAGTCGCCGCCGTCCGCTCCTCCTC----GCCTCAAGGATGCGAGCACATGCCGCCGTC
CGCCGGTTGCCGCTCTCCTCTGCCGCCTCATGGATGCAAGCGAGGGTCTCCGGCACCATCGTCCGCTCCACCTCTGCTGC
CCCACGGACATGAGCGTGGGGCACCGTGGCCGC-------CTACCGTTCTCCTCTGCTGACCCAGGTCCGTGCGACAGCC
CCGTCGATCCCCTTTGGGCGCATTCCGTTCGTTTTGCTGCCGATTTTCGTGGTGAGCATATGCTTGGGGGGAGCGTTCGT
CGGATGCCTATTCAGTGGCTCTGTTGCTGACGGAATTGGTCTTTTCAGCTCTGTGCGCCACTCTTCAGCTCATAAGATCA
GAAGTAACAGACTGATTGAACTTATATCCTTATGAACGTACAGAAACTGATGGTTAACTATATTTGTTAGTGCACACCAA
ATGTTTGATATTTGTTCTATGTGACTATTACAGAACTTTTGGGTTATACAGAGGATACAAGAGGGTTGTTTCACAGCTGA
TTCAGCATCTTCTTCAAGGTTACATCTCCCCTGTACTGATTTACTATCTTTTAAGTTCATATTTATTAGTGGCCAAAGAT
TCATGCTTGCTCCCAAGTTCTGTTGATAGAGATGTAAGACTTTTTCTTTTGTTAACATGAATTTAGTTGATTGTTAACAG
ATTTGTCTGTAAGGTTTGAGGCCGCATTTAACGGACTGAACATTTTTTCTTTCTGAACTATGATCTTATGGGAAGTAGCG
AGAGTGTGGGACTATGATTTGGCTATGGAGGCGTCACCTAACAATTCTGCATTCCAGGTATAGTTTCTGATCCTGATGGC
TAAAAATTATATATTTCTACAGTTCTTAATACAGTAATATCTGACGACATTTGTATGAAATTAATGTTGTTGTGATTAAA
TTCCATGTGTAAGAGGATCAGTTGGCGCGCTACAATAAGAGCTCATGATCAGTTAACGCACTAGAATAAAACATGGAGTA
AAGATGCTGGAAAAAAATGCATTCCTCGGTCATATGGTTACACGTGCGTTGCATGTGCATGGTTACTATGTGCTCACGAA
ATTCATGATTGAAAATCCTAATTCGGATGGAGCATAGTTTCTACAAACTTTATAGATACC
>chr6A_1
TTGAAGCGGTGTTGTGATAAGATCGCCCCATACACCGGTTTCCGACGAGTAAACACGGGCGACTGCTTGCGTAATTTGTC
CATCACTGCT------CCCTACCAAAGCCAGATGGAAGTGTTGGACGTCCCCGGCAGAGCGAAACACCGCGCCGCTGATT
GGGGATGTATCCGTGTCGAACCCCGGGGGGA-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------CGGCAATGTGGTGCTGGTCGCCGGTGACGGG
GTCCCACACAAGGAGCTGGAGACGCTTGCGAAGGTAGATGAGTGCCAGGCCATGTCGGCATCCAAGGGAGAAGAAGCGGT
CGACCAAATCTTCGTGTT------------GCAAGGAGAAGCGCTCGGGCGAGATACGATCCGGGGCCTTGAGGGAAGGC
ACGAAGGAGAGCCCGTCGTCTA---CTTGGAAGAAACCGAGGAGGGGAGGGTGGCGGCGGTGGCGGCGGCGGAATCGGCG
GCAGAAGCCTGGATCGGAGACGAGGCCGCGCCAGCGCTTGCAGACGAGGGATGCGCGGGGGAGGGTGGACGGCTGTGGGG
GGAGGCGGAGGAGGATCTCGGAGAGGAGGTTGTCGTCCTCCAGCGGCGGCACCGCCGCCG---GCGAAGGGCGGCGACGG
CGGA---GGCTGCTCATCTCGCCCTACGATGTGGGATG------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------TTTTTCTTTTCT----------------------------
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------------------------------------------------------------
>chr6D_1
TTGAAGCGGTGCTGTGATAAGATTGCCCCATACACCGGTTTCCGACGAGTAAACACGGGCGACTGCTTGCGTAATTTGTC
TCTCACTGCT------CCCTACCAAAGCCAGATGGAAGTGTTGGACGTCTCCGGCAGAGCGAAACACCGCGCCGCTGATT
GGGGATGTCTCCGTGTCGAACCCCGGGGGGA-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------CGGCAATGTGGTGCTGGTCGCCGGTGACGGG
GTCCCACACAAGGAGCTGGAGACGCTTGCGAAGGTAGATGAGCGCCAGGCCATGGCGGCATCCGAGGGAGAAGAAGCGGT
CGACCAAATCTGCGTGTT------------GCAAGGAGAAGCGCTCGGGCGAGACACGATCCGGGGCCTTGAGGGAAGGC
GCGAAGGAGAGCCCTTCGTCTAGCTCTTGGAAGAACCCGAGGAGGGGAGGGTTGCGGTGGTGGTGGCGGCGGAAGCGGCG
GCAGAAGCCTGGATCGGAGACGAGGCCGCGCCAGCGCTTGCAGACGAGGGAGGCGCGGGGGAGGGAGGACGGCTGTGGGG
GGAGGCGGAGGAGGATCTCGGAGAGGAGGTCTTCGTCCTCCAGCGGCGGCACCGCCGCCG---GCGAGGGGCGGCGGCGG
CGGA---GGCTGCTCATCTCGCCCTACGATGTGAGATGCTTTTTTTTC--------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------
>chr6B_1
TTGAAGCGGTGTTGTGATAAGATCGCCCCATACACCGGTTTCCGACGAGTAAACACGGGCGACTGCTTGCGTAATTTGTC
TCTCACTGCT------CCCTACCAAAGCCAGATGGAAGTGTTGTACGTCTCCGGCAGAGCGAAACACCGCGCCGCTGATT
GGGGATGTCTCCGCGTCGAAC-CCCGGGGGA-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------CGGCAATGTGGTGCTGGTCGCCGGTGACAGG
GTCCCACACAAGGAGCTGGAGACGCTTGCGAAGGTAGATGAGTACCAGGCCATGGCGGCATCCAAGGGAGAAGAAGCGGT
CGACCAAATCTTTGTGTT------------GCAAGGAGAAGCGCTCGGGCGAGACACGATCCGGGGCCTTGAGGGAAGGC
ATGAAGGAGAGCCCGTCGTCTA---CTTGGAAGAAACCGAGGAGGGGAGGGTTGCGGCGGTGGCGGCGGCGGAACCTGCG
GCAGAAGCCTGGATCGGAGACGAGGCCGCGCCAGCGCTTGCAGACGAGGGAGGCGCGGGGGAGGGAGGAAGGCTGTGGGG
GGAGGCGGAGGAGGATCTCGGAGAGGAGGTCTTCGTCCTCCAGCGGCGGCACCGCCGCCG---GCGAAGGGCGGCGGCGG
CGGA---GGCTGCTCATCTCGCCCTACGATGTGGGATGCTTTTTTTT---------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------
>chr6B_1
TTGAAGCGGTGTTGTGATAAGGTCGCCCCATACACTGGTTTCCGACGAGTAAACACGGGCGACTGCTTGCGTAATTTGTC
TCTCACTGCT------CCCTACCAAAGCCAGATGGAAGTGCTGTACGTCTCCGGCAGAGCGAAACACCGCGCCGCTGATT
GGGGATGTCTCCGTGTCGAACCCCGGGGGGG-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------CGGCAATGTGGTGCTGGTCGCCGGTGACGGG
GTCCCACACAAGGAGCTGGAGACGCTTGCGAAGGTAGATGAGCGCCAGGCCATGGCGGCATCCAAGGGAGAAGAAGCGGT
CGACCAAATCTTGGTGTT------------GCAAGGAGAAGCGCTCGGGCGAGACACGATCCGGGGCCTTGAGGGAAGGC
ATGAAGGAGAGCCCGTCGTCTA---CTTGGAAGAAACCGAGGAGGGGAGGGTTGCGGCGGTGGCGGCGGTGGAACCTTCG
GCAGAAGCCTGGATCGGAGACGAGGCCGCGCCAGTGCTTGCAGACAAGGGAGGCGTGGGGGAGGGAGGACGGCTAT-GGG
GGAGGCGGAGGAGGATCTCGGAGAGGAGGTTTTCGTCCTCCAGCGGCGGCACCGCCGCCG---GCGAGGGGCGGCGGCGG
CGGA---GGCTGCTCATCTCGCCCTACGATGTGGGATGCTTTTTTTT---------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------
>chr6B_1
TTGAAGCAGTGTTGTGATAAGATTGCCCCATATACCGGTTTCCGACGAGTAAACGCAGGCGACTGCTTGAGTAATTTGTC
TCGCACTGTT------GCCTACCAAGGCCACATGGAAGTGGTGGGCGTCTCCGGCAGCGCGAAGCACTGCCCCGCTANNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGCCAATGCGGTGCTGGCCGCCGGGGACGGG
GTCCCACACAAGGAGCTGTAGACGCTTCCAGAGGAAGATGAGCACGAGGCCATGGCGGCATCCAAGGGGGACGAAGCTGT
CGCCACGATCTTTGAGTT------------GCAAGGAGAAGCGCTCGGGCGAGACACGATCCGGGGCCTTGAGGGAAGGT
ACGAAGGAGAGCCCGTTGTCTA---CTTGGAAGAAACAGAGGAGGGGAGGGTTGCGGCGG------------AAGCGGCG
GCAGAAGCCTGCATGGGAGACGAGGCCGCGCCAGCGCTTGCAGACGAGGGAGGCGCGGGGGAGGGAGGACGGCTGTGGGT
GAAGGCTGAGGAGGATCTCGGAGAGGAAGTTGTCGTCCTCCAGCGGTGGCACCGCCGCCG---GCGAGGGGTGGCGGCGG
AGTA---GGCTGCTCATCTCGCCCTA------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------
>chr6B_5
----AGCGGCGTAGAGATAAGATTTCCCCACAAGCCGGTCTTTGACGAGTAAACACAGGCGAGCGCTCGTGTATGTTGTA
CGTCGTCGCCGTCTGCCACTGCCAGAACCACCTTGAAGTGCTGGGCGTCACCGTCAGCGCGAAGCACCGCCCCGTTGATT
AGGTTCT------TCTCGAACTCCCGGGGTA-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------CGGCAATGTGGTGCTGGTCGCCGGTGACGGG
GTCCCACACCAGGACCTGGAAACTCCTCGGAAGGTAGACGAGCACGAGACCATGGCGACATCCAAGGGTCGTGGA-----
----G---TCGTCGTGATCCTTGTCGCTCGGCAAGGAGAAGCGCTCGGCGGGGACACGATTGGGGGCATCCAGAGTAGGT
ACGAAGGGCCTACCCTTATATCTGTT---GAAGAAACCGAGGAGGGGAGGGTTGTGGCGATGGCGGATGCGGAATCGGCG
GACGAAGCCGGGGTCGGAGACGAGGCAGCGCCAGCGCTTGCAGACGAGGGATGCGCGCGGGAGGGAGGAGGGCTGCGGCG
GGAGGCGGAGCAGGATCTCGGAGAGCAGGTCGTCGTCGTCCAGGGGCGCGGCCGCCGGCGAGCGGGCG---TGGCGGCGG
CGGCGGCGGCTGCTCATCTCGCCCTA------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------
>chr6B_64
----------------------------------------------------------------GCTTGCGTAATTTGTC
TCTCACTGCT------CCCTACCAAAGCCAGATGGAAGTGTTGTACGTCTCCGGCAGAGCGAAACACCGCGCCGCTGATT
GGGGATGTCTCCGTGTCGAACCCCGGGGGGA-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------CGGCAATGTGGTGCTGGTCGCCGGTGACGGG
GTCCCACACAAGGAGCTGGAGACGCTTGCGAAGGTAGATGAGCGCCAGGCCATGGCGGCATCCAAGGGAGAAGAAGCGGT
CGACCAAATCTTGGTGTT------------GCAAGGAGAAGCGCTCGGGCGAGACACGATCCGGGGCCTTGAGGGAAGGC
ATGAAGGAGAGCCCGTCGTCTA---CTTGGAAGAAACCGAGGAGGGGAGGGTTGCGGCGGTGGCGGCGGCGGAACCTGCG
GCAGAAGCCTGGATCGGAGACGAGGCCGCGCCAGCGCTTGCAGACGAGGGAGGCGCGGGGGAGGGAGGACGGCTGTGGGG
GGAGGCGGAGGAGGATCTCGGAGAGGAGGTCTTCGTCCTCCAGCGGCGGCACCGCCGCCG---GCGAGGGGCGGCGGCGG
CGGCGGGGGCTGCTCATCTCGCCCTACGATGTGGGATGAGTTTTTTTT--------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------
>chr6D_108
--------------------------------------------------------------------------------
----------------------------------GAAGTGCTGGGCGTCACCGTCAGCGCGAAGCACCGCCCCGTTGATT
AGGTTCT------TCTCGAACTCCCGGGGAA-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------CGGCAATGTGGTGCTGGTCGCCGGTGACGGG
GTCCCACACCAGGACCTGGAAACGCCTCATACGATAGACGAGCACGAGACCATGGCGACATCCAAGGGTCATGGA-----
----G---TCTTCGTGATCCTTGTCGCACAGCAAGGAGAAGCGCTCGGGAGGGACACGATTGGGGGCATCCAGAGTAAGT
AGGAAGGGCCGACCTTCATATCTGTC---GAAGAAACCGAGGAGGGGAGGGTTGTGGCGATGGCGGAGGCGGAATCGGCG
GAAGAAGCCGGGGTCGGAGACGAGGCAGCGCCAGCGCTTGCAGACGAGGGATGCGCGCGGGAGGGAGGAGGGCTGCGGCG
GGAGGCGGAGCAGGATCTCGGAGAGCAGGTCGTCGTCGTCCAGGGGCGCGGTCGCCGGCGAGCGGGCGTGGCGGCGGCGG
CGGCGGCGGCTGCTCATCTCGCCCTA------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------
>chr5B_643
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------------TATCTATATCTATATCTATACTACTATTAATC
TATACTACTATTAAAAGAGCAAACATGATTTCTCCTACAGACACACCACAAAGTGTACACAGGATTACTAGAGGCGTTCG
ATCAATCCAATTAAATCACATCTAGCGGTCCATATTACATCAAGGGTCTGCCACACAAATGAACGATCCAGATGAAATGT
TCTGCCGGAGCAGACTGCCCACCGCACCCC-TTCGTCCTCAATTAGCGGGGATAGGGGATTTCAATCCCGTAATTTTCTC
TGCCCTCACAATCACAATTTGTCTGTCCTCC-TTCGCTGCCGCACGGATGCCAACGCGGATCCCC-GCCACCCGCCCACC
GCCCCTCCTCTGCTGGCTGTTGCCCCATGGACGCGAGCACTAATCCACGTTCCCGCGGTTCTCTCCTCTTCTGCTGCCCA
ATGGACGCG-AACACTGGACTAAGCCGCCGCTGTCCGCTCCTC---TACAGCCCCAAGGACGCGAGCGCAGGCCGCTGTC
-GCTGCTTGCCGCTCTCCTCTGCTGCCCCATGGATGCCAGCAAGGATCTCCGGCGCCACCGTCCGCTCCACCTCTGCTGC
CCCACGGACGTCAGCGCAGGGCGCCATGGCCGC-------CTGCAGATCTGCCTTACTGACCCA----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------------------------------------------------
>chr1A_663
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------CTTCTATA--TC
TATACTACTATTAAAAGACCAAACATGAATTCCCCTACAGACACACCATAAAGTGTACACAGGATTACTAGAGACGTTTG
ATTAATCCAACTAAATCACATCTAACAGACCATATTACATCAAGAGTCTACCACGCAAATGAGCGATTCAGATTAAATGT
TCTGCC--AGCAGACGCGTCCCAC--------TCGTCCTCAATTAGCAGGGATAAGGGATTTCTATCCCGTAATCTTCTC
TCTG---------ACACGTTGTCTCTCCTGCCTCA--TGCCCCACGAACGTGAACGCATATCGCC-GCCA-CCGCCCACC
GCTCCTCCTA--CTGGCTGCTCCCCCATGGGCGCGAGCGCGGATCGACA---CCGCTGCCTGCTCCTCTTCTGCTATGGC
ACGAACGCG-AAAACAGGACTCAGACGCCGCCGTTCGCTCCTTCTCTACTGTCCCAAGGACGCGAGCACAGGCCGTCGTC
CGCCACTTGCTGCTCTCCACTTCCGCCTCATGGATGTGAATGAGGGTCTCCAGCACCACCGTCCGCTCCACCTCTGCTGC
CCCACGGACGTGAGCACGGGGCACCGTGGCCGCTGCTCGCCTGCTGCTCTCCTCTGCTGACCCA----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------
>chr5B_665
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------TCTATA--TC
TATACTACTATTAAAAGAGCAAACATGAATTCCCCAACAGACACATCATAAAGCGTACACAGAATCACCAGAAACGTTGG
ATTAGTCCAACTAAATCATATCTAACAATCCATATTACATCAGGGGTCTGTCACACAAATAAACGATGCAGATTAAATGT
TCTGCC--AGCAGACGCTCCT-------CC-TTCGTCCTCAATTAAT-GGGATAGGGGATTTCTATCCCGTAATCTTCTC
TCT-CCCTC-ACAACACGCCGTCTCTCCTCC-TCT--TGCCCCACCGACGCGAGAGCAGATCGCC-GCCA-CCGCCCACC
GCTCCTCCTCTGCTGGCTGCTGCCCCATGGACGCGAGCGTGGATCGACGTCGCCGTTGTCCGCTCCTCTTCTGCTACTGC
TCGGACGCG-AACACAAAACTCAGTCGCCGCCGTCCGCTCCTCCTC----GCCTCAAGGATGCGAGCACATGCCGCCGTC
CGCCGGTTGCCGCTCTCCTCTGCCGCCTCATGGATGCAAGCGAGGGTCTCCGGCACCATCGTCCGCTCCACCTCTGCTGC
CCCACGGACATGAGCGTGGGGCACCGTGGCCGC-------CTGCCGTTCTCCTCTGCTGACCCAGGTCCGTGCGACAGCC
CCGTCGATCCCCTTTGGGCGCATTCCGTTCGTTTTGCTGCCGATTTTCGTGGGGAGCATATGTTT-GGGGGAGCGTTCGT
CGGATGCCTATTCAGTGGCTCTGTTGCTGACGGAATTGGTCTTTTCAGCTCTGTGCGCCACTCTTCAGCTCATAAGATCA
GAAGTAACAGACTGATTGAACTTATATCCTTATGAACGTACAGAAACTGATGGTTAACTATATTTGTTAGTGCACACCAA
ATGTTTGATATTTGTTCTATGTGACTATTACAGAACTTTTGGGTTATACAGAGGATACAAGAGGGTTGTTTCACAGCTGA
TTCAGCATCTTCTTCAAGGTTACATCTCCCCTGTACTGATTTACTATCTTTTCAGTTCATATTTATTAGTGGCCAAAGAT
TCATGCTTGCTCCCAAGTTCTGTTGATAGAGATGTAAGACTTTTTCTTTTGTTAACATGAATTTAGTTGATTGTTAACAG
ATTTGTCTGTAAGGTTTGAGGCCGCATTTAACGGACTGAACATTTTTTCTTTCTGAACTATGATCTTATGGGAAGTAGCG
AGAGTGCGGGACTATGATTTGGCTATGGAGGCGTCACCTAACAATTCTGCATTCCAGGTATAGTTTCTGATCCTGATGGC
TAAAAAT-ATATATTTCTACAGTTCTTAATACAGTAATATCTAACGACATTTGTATGAAATTAATGTTGTTGTGATTAAA
TTCCATGTGTAAGAGGATCAGTTAGCGCGCTACAATAAGAGCTCATGATCAGTTAACGCACTAGAATAAAACATGGAGTA
AAGATGCTGGAAAAAAATGCATTCCTCGGTCATATGGTTACACATGCGTTGCATGTGCATGGTTACTATGTGCTCACGAA
ATTCATGATTGAAAATCCTAATTCGGATGGAGCAAAGTTTCTACAAACTTTATAGATACC
>chrUn_665
TCTT----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------ATC
TATACTACTATTAAAAAAGCAAACATGAATTCCCCAACAGACACACCATAAAATGTACACAGAATCACCAGAAACGTTGG
ATTAATCCAACTAAAGAATATCTAACAATGCATATTACATCAGAGGTCTATCACACAAATGAACGATGCAGATTAAATGT
TCTGCC--AGCAGACGCTCCT-------CC-TTCGTCCTCAATTAAT-GGGATAGGGGATTTCTATCCCGTAATCTTCTC
TCT-CCCTC-ACAACACGCCGTCTCTCCTCC-TCT--TGCCCCATCGACGCGAGAGCAGATCGCC-GCCA-CCGCCCACC
GCTCCTCCTCTGCTGGCTGCTGCCCCATGGGCGCGAGCGTGGATCGACGTCGCCGTTGTCCGCTCCTCTTCTGCTATTGC
TCGGACGCG-AACACAAAACTCAGTCGCCGCCGTCCGCTCCTCCTC----GCCTCAAGGATGCGAGCACATGCCGCCGTC
CGCCGGTTGCCGCTCTCCTCTGCCGCCTCATGGATGCAAGCGAGGGTCTCCGGCACCATCGTCCGCTCCACCTCTGCTGC
CCCACGGACATGAGCGTGGGGCACCGTGGCCGC-------CTGCCATTCTCCTCTGCTGACCCAGGTCCGTGCGGCAGCC
CCGTCGATCCCCTTTGGGCGCATTCCGTTCGTTTTGCTGCCGATTTTCGTGGGGAGCAT----TTGGGGGGAGCGTTCGT
CGGATGCCTATTCAGTGGCTCTGTTGCTGACGGAATTGGTCTTTTCAGCTCTGTGCGCCACTCTTCAGCTCATAAGATCA
GAAGTAACAGACTGATTGAACTTATATCCTTATGAACGTACAGAAACTGATGGTTAACTATATTTGTTAGTGCACACCAA
ATGTTTGATATTTGTTCTATGTGACTATTACAGAACTTTTGGGTTATACAGAGGATACAAGAGGGTTGTTTCACAGCTGA
TTCAGCATCTTCTTCAAGGTTACATCTCCCCTGTACTGATTTACTATCTTTTCAGTTCATATTTATTAGTGGCCAAAGAT
TCATGCTTGCTCCCAAGTTCTGTTGATAGAGATGTAAGACTTTTTCTTTTGTTAACATGAATTTAGTTGATTGTTAACAG
ATTTGTCTGTAAGGTTTGAGGCCGCATTTAACGGACTGAACATTTTTTCTTTCTGAACTATGATCTTATGGGAAGTAGCG
AGAGTGCGGGACTATGATTTGGCTATGGAGGCGTCACCTAACAATTCTGCATTCCAGGTATAGTTTCTGATCCTGATGGC
TAAAAAT-ATATATTTCTACAGTTCTTAATACAGTAATATCTAACGACATTTGTATGAAATTAATGTTGTTGCGATTAAA
TTCCATGTGTAAGAGGATCAGTTAGCGTGCTACAATAAGAGCTCATGATCAGTTAACACACTAGAATAAAACATGGAGTA
AAGATGCTGGAAAAAAATGCATTCCTCGGTCATATGGTTACACATGCGTTGCATGTGCATGGTTACTATGTGCTCACGAA
ATTCATGATTGAAAATCCTAATTCGGATGGAGCAAAGTTTCTACAAACTTTATAGATACC
>chr2D_665
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------TCTATA--TC
TATACAACTAATAAAGGAGCAAAGATGAATTACCCAACAGACACGCCACAAAGTGTACACAAGATTACTAGAGGCATTCG
ATCAATCCAACTAAATCACATCTGACAGTCCATATTACATCAATGGCCAGCCACGCAAATGAATGGTCCAGATTAAATGT
TCTGCCGGGACAGACTGCCATGCGCACCCG-TTCGTCCTCAATTAGCGGGATTAAGGGATTTCTATCCCGTAATTTTCTC
TCTTCCCTC-ATAACAAGTTGTCTCTCCTCC-TCTGCTGCCCCGCGGATGCGAGCGCAGATCGCC-TCCC-CTGTCCGTC
GTTCCTCCTCTGCTGGCTGCTGCC--------GCGAGCGCGGATCGACATCGCCGCTTCCCGCTCCTCTTCTACT--CCC
ACGGATGCG-AACAGGGGACTCAGTCACTGGCGTCTGCTCCTCCTCTACTTCCCCAAGGACGCGAGCACAGGCCGCCATG
-GCTGCTTCCCACTCTCCGTTGCCGCCCCATGGATG--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------
>chr5A_667
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------TATA--TC
TATACTACTATTAAAAGAGCAAACATGAATTCCCCAACAGACACACCATAAAGTGTACACAGAATCATCAGAAACGTTGG
ATTAATCCAACTAAATCATATCTAAGAATCCATATTACATCAAGGGTCTGGCACACAAATGAACGATGCAGATTAAATGT
TCTGCC--AGCCGACGCTCCT-------CC-TTCGTCCTCAATTAAT-GGGATAGGGGATTTCTATCCCGTAATCTTCTC
TCT-CCCTC-ACAACACGCCGTCTCTCCTCC-TCT--TGCCCCACCGACGCGAGAGCAGATCGCC-GCCA-CCGCCCACC
GCTCCTCCTCTGCTGGCTGCTGCCCCATGGACGCGAGCGTGGATCGACGTCGCCGTTGTCCGCTCCTCTTCTGCTACTGC
TCGGACGCG-AACACAAAACTCAGTCGCCGCCGTCCGCTCCTCCTC----GCCTCAAGGATGCGAGCACATGCCGCCGTC
CGCCGGTTGCCGCTCTCCTCTGCCGCCTCATGGATGCAAGCGAGGGTCTCCGGCACCATCGTCCGCTCCACCTCTGCTGC
CCCACGGACATGAGCGTGGGGCACCGTGGCCGC-------CTGCCGTTCTCCTCTGCTGACCCAGGTCCGTGCGACAGCC
CCGTCGATCCCCTTTGGGCGCATTCCGTTCGTTTTGCTGCCGATTTTCGTGGGGAGCATATGTTT-GGGGGAGCGTTCGT
CGGATGCCTATTCAGTGGCTCTGTTGCTGACGGAATTGGTCTTTTCAGCTCTGTGCGCCACTCTTCAGCTCATAAGATCA
GAAGTAACAGACTGATTGAACTTATATCCTTATGAACGTACAGAAACTGATGGTTAACTATATTTGTTAGTGCACACCAA
ATGTTTGATATTTGTTCTATGTGACTATTACAGAACTTTTGGGTTATACAGAGGATACAAGAGGGTTGTTTCACAGCTGA
TTCAGCATCTTCTTCAAGGTTACATCTCCCCTGTACTGATTTACTATCTTTTCAGTTCATATTTATTAGTGGCCAAAGAT
TCATGCTTGCTCCCAAGTTCTGTTGATAGAGATGTAAGACTTTTTCTTTTGTTAACATGAATTTAGTTGATTGTTAACAG
ATTTGTCTGTAAGGTTTGAGGCCGCATTTAACGGACTGAACATTTTTTCTTTCTGAACTATGATCTTATGGGAAGTAGCG
AGAGTGCGGGACTATGATTTGGCTATGGAGGCGTCACCTAACAATTCTGCATTCCAGGTATAGTTTCTGATCCTGATGGC
TAAAAAT-ATATATTTCTACAGTTCTTAATACAGTAATATCTAACGACATTTGTATGAAATTAATGTTGTTGTGATTAAA
TTCCATGTGTAAGAGGATCAGTTAGCGCGCTACAATAAGAGCTCATGATCAGTTAACGCACTAGAATAAAACATGGAGTA
AAGATGCTGGAAAAAAATGCATTCCTCGGTCATATGGTTACACATGCGTTGCATGTGCATGGTTACTATGTGCTCACGAA
ATTCATGATTGAAAATCCTAATTCAGATGGAGCAAAGTTTCTACAAACTTTATAGATACC
>chr2D_675
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--TATTACTATTAAAAAAGCAAACATGAACTCTCCTAGAGACATACCACAAAGTGTACACAGGATTACCAGAGACGTTCG
ATTAATCTAACCAAATCACATCTAACAGTCTATATTACATCAAGGGTCTGTCACGCAAATGAACGATCCAGATTAAATGT
TCTGCC--AGCAGACGCGCCT-------CCCTTGGTCCTCAATTAGCGGGGATAGGGAATTTCTATCCCGTAATCTTCTC
TCTGCCCTC-ACAACACGTTGCCTCTCCTCC-TT-----CCCCACGGACGCGAGCACAGATCGCCCGCCA-CCGCCCACC
GCTCCTCCTCTGCTGGCTGCTGCCCCATGGGGGCGTGTGCAGATTGACGTCGCCGCTGTCCGCTCCTCTTCTGCTGCTGC
ACGGACGCGTAACACAGGACTCAATCGCCACTGTCCGCTCCTCCTCTACTGCCACAAGGATGTGACCACAGGCCGCCGTC
TGCCGCTTGCCGCTCTCCTCTGTGGCCTAATCGATGCGAGCGAGGGTCTCCGGCACCACCGTCCGCTCCACCTCTGCTGC
CACACAGACGTGAGCGGGGGGCGCCGTGGCCGC-------CTGCCGCTGTCCTCTGCTGACCCA----------------
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>chrUn_1501
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----------------------------------------------------------TATATTTGTTAGTGCACACCAA
ATGTTTGATATTTGTTCTATGTGACTATTACAGAACTTTTGGGTTATACAGAGGATACAAGAGGGTTGTTTCACAGCTGA
TTCAGCATCTTCTTCAAGGTTACATCTCCCCTGTACTGATTTACTATCTTTTCAGTTCATATTTATTAGTGGCCAAAGAT
TCATGCTTGCTCCCAAGTTCTGTTGATAGAGATGTAAGACTTTTTCTTTTGTTAACATGAATTTAGTTGATTGTTAACAG
ATTTGTCTGTAAGGTTTGAGGCCGCATTTAACGGACTGAACATTTTTTCTTTCTGAACTATGATCTTATGGGAAGTAGCG
AGAGTGCGGGACTATGATTTGGCTATGGAGGCGTCACCTAACAATTCTGCATTCCAGGTATAGTTTCTGATCCTGATGGC
TAAAAAT-ATATATTTCTACAGTTCTTAATACAGTAATATCTAACGACATTTGTATGAAATTAATGTTGTTGTGATTAAA
TTCCATGTGTAAGAGGATCAGTTAGCGCGCTACAATAAGAGCTCATGATCAGTTAACGCACTAGAATAAAACATGGAGTA
AAGATGCTGGAAAAAAATGCATTCCTCGGTCATATGGTTACACATGCGTTGCATGTGCATGGTTACTATGTGCTCACGAA
ATTCATGATTGAAAATCCTAATTCGGATGGAGCAAAGTTTCTACAAACTTTATAGATACC
>SNPs
-----------------S-------------------------------------------S------------------
-S------S-------------------S------------S-------------S----S------------S------
-S----------S-------S--S--------------------------------------------------------
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----------------------------------------------------SS---------S-------SS-------
S-----S--------S-----------------------------S--------------------SS------S---SS
-S------------------------------S-S---------------S-----------------------------
---S---------S-------------S--------------------------------------S-------------
----------------S--------S----S-------------------------------------------------
---------------------------------------------------------------------S----------
---------S----------------S---S-------------------------------------------------
-------S----------------S---------------------------------------------S---------
-------------------------------------------------------S----------------------S-
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S---------------S---------------------------------------------------------------
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------------------------------------------S-------------------------------------
----------------------------------------------------S---------S-----------------
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----------------------------------------------------S---------------------------
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------S-------------------------------------------------------------------------
-------S----------------------------------S-------------------------------------
-----------------------S--------------------------------------------------------
-------------------------------------------S------------------------------------
----------------------------------S-------------------------
>forward_560
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------------------------------------------------------------TCCAAGATAGACGATGCGCC
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>reverse_2344
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-----------------------GGCGCGCTACAATAAGAGCT-------------------------------------
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------------------------------------------------------------
