>input_sequence_86526
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------ATGAGCTGC
GCCGCCCCAAAAGCCCCCGCCGGAGAGGAGAAGAAGACGTCATGGCCGGAGGTAGTGGGAAAGTCCATCGAGGAGGCCAA
GGAGATCATCCTTAAGGACATGCCTGACGCCGACATCGATGTCCTTCCTGCTGGCTCGGCGGCGACCCTCGACTTCAGGA
CCAACCGTGTCCGCATCATCGTCGACACTGTCTCGACCACCCCTTCCATTGGTTAG------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------
>chr1B_1_TraesCS1B01G035100
GACCCAGTTAGGTTATAAAGCTCCGCTTTCCCTTAAAATAAATCTAGAACGGAGGTGGTACTAAACAAGTCCTTCCACCA
GCTCCCTCCTGACCAATCTGGAGCATCCATTCGATATCCAACGGCCCGTGGTAATTATTGTCAAAGTTTGACCATAAAAT
GAACTAATAAAATATAATCTCTATGGCAG-AAAATATATTATGTGAATTCTCTTTTGAATGCAAATCTTCAATGATATAC
TTTTTGTATTATATAAATATTAC-ATGTGACTGCGCTATATGGATGATTAACTTTTGATCCAAAATACTAGTAGTAGGTC
TAATAAACCTTAACGAGGGAGTATGCAAGTAG---------------CCGACATGATCTACACCGAGCTACACGTCCATC
GACCCTTGAATCACGGGC-ACGTTGTCGTCTTCTTTATCAGCCCCACGTGTTGTCCATTACGAAATCAAGTGTGTCCAAT
TTAGGAGCCACGTCGTGTACCA--GACGGCGCATGCACGCATGTGCCAGAGC-ATCTTCTCTGCATATGAGGCTAGTTAG
CACAATGAAACAAGTAGTCGTGTTCCACGCCTGCATGTGTGACAGCATCTTATCTTCTCTCGTGCTTGTCTCATGCATGT
GGGAGCATCCTAT-CCCATCTTCTCTTGTGATAGATCTTCCCTATAAATAGGCCAAAGTGTTATGCAAATACTCATATCA
GTCAAGTTCAGAGTTAGCTCAAGGTCCATTTAGCTGGTGAGTAGTGTTGGGTATATATTCCATATT-------TCCATTT
CCATATGCTTTCTGTCAATAAGTTTCTCTGTATCCATCGTCCTCATGCAGAGGCCGGGGTTATCCTCCTTTTCGAAAAAA
GCTATATGACTAGCATTAT-GTTATTTTGATCTGTAGTCTGAACCAA-AAAAGGAAGATGATTTGGTGAACTATTTGGGC
CAACTGTTGTTGTCATTTGTAGTCTGAACTGAACTATTTTAATCAATTGTTTACAGCTCACGGAATCAAGGATGAGCTGC
GCCGCCCCAAAAGCCCCCGCCGGAGAGGAGAAGAAGACGTCATGGCCGGAGGTAGTGGGAAAGTCCATCGAGGAGGCCAA
GGAGATCATCCTTAAGGACATGCCTGACGCCGACATCGATGTCCTTCCTGCTGGCTCGGCGGCGACCCTCGACTTCAGGA
CCAACCGTGTCCGCATCATCGTCGACACTGTCTCGACCACCCCTTCCATTGGTTAGCAAGCTTTGTGAGCGAGAGACAAA
ATGGATGCACTTATGCATGCTGATGAATAAGTAGTTTCAGTAATCATGGATGAATAAATACACGCTGACCAATGGCGTGT
GTCGATGTACTTATGGTTCAATGGACTTGACCAGTTATTTTTAATATATGAGATGTCGGCTTGTTGTTCATGTGTTTAAT
AAAATGCTCATGAAATATGCAT-ACTGTGGGCATGTTGCTGGATTATTTCAACAACTTAGACCTGATGGTGTCATTAGAA
TGAAATATGCTAATCACACCTTAATCTACTTAGAGAAGAACTTGAGCCCCATGAGATATCTTAAATGGATTCTTTCGTGC
TTTGGACAAACTTCTGAGATGAGAATTTGTTTTAGTGTGACCCCGTGCCTA-TCAACATTATTGTTGATGAGGCTTAACC
TTTTCCTCAAACCCTTTGCCGACAAATAAGAAACATGACCCCGTGCCTATCAACATTATTGCTGATGAAAGAACTAGATT
TTTCAGAAGATTTATGGATAGAGGATGCTGTTTTAGGTGACAAGCTAGTACTCCATGTTATACGATTTATCTTTGTGTAA
GCATATCTCTGTAGCTAGAGTGCTAGGCACTAATGCCACTGCTCTAAAATTTAG-AAGGA-ATATATATGCTGATACTGC
TGGGCTGTGGCATCAATTACTTGCTGATTGTGAAGGTTTTTGTG-TGGGAAATAAGCAAGATTCATAGTAGA--------
---------------TGGATTTTAGAGACGAACGGGGTATTTTTGAGT-ATTCTATGTATATAGCTTTGAAAGCTCGGCA
AATGAAGCGACCTTGTAGAAAATGTTGGTATGTAAAAGTTCTACTGAAGATCAAAGTATTTCTTTGGTGAACATTCGGAA
GTAGTATCC--------TAACCAGAGATAATAAGAATCATATATAGTCGTAGTGTGGTGCAGGAAAATTGTCC----TTT
TTTTGCAGTAGAAAAGA---GTCAGGGAATCATATCTTCTTTATGAGTTTGGTTGCTCGT
>chr1A_125
--------------------------------------------------------------------------------
--------------------------------------------CCCGTTGTAATTATTGTCAAACTTTGACCATAAAAT
GAACTAATAAAATATAAACTATACGTGACAAAACTATATTGTATGAATTCTCTTTTGAATGCAAATA--CAATTCTATAC
TTTTTGTATTATATAAATAATACGATGTGACTAAGTTATATAAATGAGCAACATTTGATACAAAATACTAGTAGGG---C
TAATAAACCTTGATGAGGGAGTATGCAAGTAG---------------CCGACATGATCTACGCCGAGCAACACGTCCATC
CACCCTTGAATCACGTGGTACGTTGTTGTCTTCTTTAGCAGCCCAACGTGTTGTCCACTACGAAATCAAGTGTGGCCAAT
TTAGGAGCCACCTCGTGTACCACGCACGCTGCATGCATGCATGTG-CGACAGTACCTTCTCTGCATATGCGGCTAGTTAG
CACAAGCAAACAATTTCTCGTGCTCCACGCCTGCATGTGTGAGAGCATCTTATCTTCTCTCCTGCTTGTTTCATGCATGT
GACAGCATC-TAT-GTCATCTTCTGTCGTGATAAATCTTCCCTATAAATAGGGC-AAGTGTTATGCAAATACTCATATCA
GTCAAGTTCAGAGTAAGCTCGAGGTCCATTTAGCTGGTTAGTACTGTTGGGTATATATTCCATATT-------TTCATTT
CCATATGCTTTCTGCCAATAAGTTTCTCTGTATGCATCATCCTCATACAGAGGCCGGGGTTATCCTTCTTTTCGAAAAAA
GATATATGACTAACATTAGCATTGTTTTGATCTGTAGTCTGAACCAA-AAAGGAAAGACGATTTGATGAACTATTTGGGC
CAACTGTTATTGTGATTTGTAGTCTGAACTGAACTATTTTGATCAATTGTTTGCAGCTCACCGAATCAAGGATGAGCTGC
GCCGCCCCAAAAGCCCCCGCCGGAGAGGAGAAGAAGACGTCATGGCCGGAGGTAGTGGGAAAGTCCATCGAGGAGGCCAA
GGAGATCATCCTTAAGGACATGCCTAACGCCGACATCGATGTCCTTCCTGCTGGCTCGGCGATGACCCTCGACTTCAGGA
CCAACCGTGTCCGCATCATCGTTGACACTGTCGCGATCACCCCTTCCATTGGTTAGCAAGCTTTGCGAGCGAGATACAAA
ATGGATGCACTTATGCATTCTGATGAATAAGTAGTTTCAATAATCATGGATGAATAAATACACGCTGATCAATGGCGTGT
GTCGATGTACTTATGGTTCAATGGACTTGACCAGTTATTTTTAATTTATGAGATCTCGGCTTGCTGTTCATGTGTTTACT
AAAATGCTCATGAAATATGCAT-ACTATGGGCATGTTGCTGGATTATTTCAACAACTTAGACCTAATGGTGTCATTAGAA
TGAAATATACTAATCACACCTTAATCAACTTAGAGAAGAACTCCAGCCCCATGAGATATCTTAAATGGATTCTTTTGTGC
TTTGGACAAACTTCTGAGATGAGAATTAGTTTTAGTGTGACCCCGTGCCTA-TCAACATTATTGTTGATGAGGCTTAACC
TTTTGCTCAAACCCTTTGCCGACATATAAGAAACATGA------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------
>chr1B_131
--------------------------------------------------------------------------------
--------------------------------------------------GTAATTATTGTCAAACTTTTACCATAAAAT
GAACTAATAAGATATAAATTATATA-GATAAAATTATAGTGTGTGAATTCTCTTTTGAATGCAAATCCT--ATTATATAC
TTTTTGTATTATATAAATAACACAATGCGATTGAGTTATATAGATGATCAACTTTTGATCTAAAATACTAGTATGG---C
TAATAAACCTTGACGAGGGAGTACGCAAGTAG---------------CCGACATGATCTACACCGAGTTACAAGTCCATC
GACCCTTGAATCACGGGC-ACGTTGTCGTCTTCTTTAGCAGCCCCACGTGTTGTCCATTACGAAATCAAGTGTGTCCAAT
TTAGGAGCCACGTCGTGTACCA--CACGGTGCATGCACGCATGTG-CAGAGC-ATCTTCTCTGCAAATGAGGCTAGTTAG
CACAATAAAATAAGTAGTCGTGCTCCACGCCTGCATGTGTGAGAGCATCTTATCTTCTCTCGTGCTTGTCTCATGCATGT
GGGAGCATCCTATCCCCATCTTCTCTAGTGATAGATCTTCCCTATAGATAGGCCT-AGCGTTATGCAAATACTCATACCG
GTCAAGTTCAGAGTGAGCTCGAGGTTCATTTAGCTGGTGAGTAGTGTTGGGTATGTATTCCATATT------TTCCATTC
CCATATGCTTTCTGTCAATAAGTTTCTCTGTATGCATCGTCCGCGTGGAGAGGCCGGGGTTATCCTCCTTTTCGAAAAAA
GCTATATGACCAGCATTAT-GTTATTTTGATCCGTAGTCTGAACCAATAAAAGAAAGATGATTTGGTGAACTATTTGGGC
CAACTGTTATTGT-ATTTGTAGTCTGAATTGAACTATTTTGATCAATTGTTTGCAGCTCACGGAATCGAGGATGAGCTGC
GTCGCCCCAAAAGCCCCCGCCGGAGAGGAGAAGAAGACGTCATGGCCTGAGGTAGTGGGAAAGTCAATCGAGGAGGCCAA
GGAGATCATCCTTAAGGACATGCCTGACGCCGACATCGATGTCCTTCCTGCTGGCTTGGCGATGACCCTCGACTTCAGGA
CCAACCGTGTCCGCATCATCGTCGACACTGTAGCGACCTCCCCTTCCATTGGTTAGCAAGCTTTGCGAGCGAGAGACAAA
ATGGATGCACTTATGCATGCTGATGAATAAGTTGTTTCAATAATGATGGATGAATAAATACACGCTGACCAATGGCGTGT
GTCGATGTACTTATTGGTAAATGGACTTGACCAGTTATTTTTAATTTATGAGATGTGGGCTTGTTGTTCATGTGTTTACT
AAAATGCTCATGAAATATGCAT-ACTGTGGGCATGTTGCTGGATTATTTCAACAACTTAGACCTAATGATGGCATTAGAA
TG-AATATACTAACCACACCTTAATCTACTTAGAGAAGAACTCGAGCCCCATGAGATATCTTAAATGGATTATTTCGTGC
TTTGGACAAACTTCTGAGATGAGAATTAGTTTTAGTGTGACCCCGTGCCTA-TCAACATTATTGTTGATGAGGCTTAACC
TTTTGCTCAAACCCTTTGCCGACATATAAGAAACATGA------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------
>chr1D_133
--------------------------------------------------------------------------------
----------------------------------------------------AATTATTGTCAAACTTTGACCATAAAAT
GAACTAATAAAATATAAACTATATGTGACAAAACTATATTGTGTGAATTCTCTTTTGAATGCAAATA--CAATTCTGTAA
TTTTTGTATTATATAAATAATACGATGTGACTGAGTTATATAAATGAGCAACATTTGATACAAAATACTAGTAGGG---C
TAATAAACCTTGACGAGGGAGTATCCAAGTAG---------------CCGA---------------GCAACACGTTCATC
CACCCTTGAATCACGTGGTACGTTGTTGTCTTCTTTAGCAGCCCAACGTGTTGTCCACTACGAAATCAAGTGTGGCCAAT
TTAGGAGCCACCTCGTGTACCACGCACGCTGCATGCATGCATGTG-CGACATTATCTTCTCTGCATATGCGGCTAGTTAG
CACAAGCAAACAATTTCTCGTGCTCCACGCGTGCATGTGTGAGAGCATCTTATCTTCTCTCCTGCTTGTCTCATGCATGT
GAGAGCATC-TAT-CTCATCTTCTGTCGTGATAAATCTTCCCTATAAATAGGGC-AAGTGTTATGCAAATACTCATATCA
GTCAAGTTCAGAGTAAGCTCGAAGTCCATTTAGCTGGTTAGTAGTGTTGGGTATATATTCCATATTCCATATTTCCATTT
CCATATGCTTTCTGCCAATAAGTTTCTCTATATGCATCATCCTCATACAGAGGCCGGGGTTATCCTTCTTTTCGAAAAAA
GATATATGACTATCATTAGCATTGTTTTGATCTGTAGTCTGAACCAA-AAAGGAAAGAAGATTTGATGAACTATTTGGGC
CAACTGTTATTGTGATTTGTAGTCTGAACTGTACTATTTTGATCAATTGTTTGCAGCTCACCGAATCAAGGATGAGCTGC
GCCGCCCCAAAAGCCCCCGCCGGAGAGGAGAAGAAGACGTCATGGCCGGAGGTAGTGGGAAAGTCCATCGAGGAGGCCAA
GGAGATCATCCTTAAGGACATGCCTAACGCCGACATCGATGTCCTTCCTGCTGGCTCGGCGATGACCCTCGACTTCAGGA
CCAACCGTGTCCGCATCATCGTTGACACTGTCGCGACCACCCCTTCCATTGGTTAGCAAGCTTTGCGAGCGAGATACAAA
ATGGATGCACTTATGCATTCTGATGAATAAGTAGTTTCAATAATCATGGATGAATAAATACACGCAGATCAATGGCGTGT
GTCGATGTACTTATGGTTCAATGGACTTGACCAGTTATTTTTAATTTATGAGATCTCGGCTTGCTGTTCATGTGTTTACT
AAAATGCTCATGAAATATGCAT-ACTATGGGCATGTTGCTGGATTATTTCAACAACTTAGACCTAATGGTGTCATTAGAA
TGAAATATACTAATCACACCTTAATCAACTTAGAGAAGAACTCGAGCCCCATGAGATATCTTAAATGGATTCTTTTGTGC
TTTGGACAAACTTCTGAGATGAGAATTAGTTTTAGTGTGACCCCGTGCCTTTTCAACATTATTGTTGATGAGGCTTAACC
TTTTGCTCAAACCCTTTGCCGACATATAAGAAACATGA------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------
>chr1D_133
--------------------------------------------------------------------------------
----------------------------------------------------AATTATTGTCAAACTTTGACCATAAAAT
GAACTAATAAAATATAAACTATATGTGACAAAACTATATTGTGTGAATTCTCTTTTGAATGCAAATA--CAATTCTGTAA
TTTTTGTATTATATAAATAATACGATGTGACTGAGTTATATAAATGAGCAACATTTGATACAAAATACTAGTAGGG---C
TAATAAACCTTGACGAGGGAGTATCCAAGTAGCCGACATGATCTACACCGA---------------GCAACACGTTCATC
CACCCTTGAATCACGTGGTACGTTGTTGTCTTCTTTAGCAGCCCAACGTGTTGTCCACTACGAAATCAAGTGTGGCCAAT
TTAGGAGCCACCTCGTGTACCACGCACGCTGCATGCATGCATGTG-CGACATTACCTTCTCTGCATATGCGGCTAGTTAG
CACAAGCAAACAATTTCTCGTGCTCCACGCGTGCATGTGTGAGAGCATCTTATCTTCTCTCCTGCTTGTCTCATGCATGT
GAGAGCATC-TAT-CTCATCTTCTGTCGTGATAAATCTTCCCTATAAATAGGGC-AAGTGTTATGCAAATACTCATATCA
GTCAAGTTCAGAGTAAGCTCGAAGTCCATTTAGCTGGTTAGTAGTGTTGGGTATATATTCCATATTCCATATTTCCATTT
CCATATGCTTTCTGCCAATAAGTTTCTCTGTATGCATCATCCTCAT----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------
>chr1D_133
--------------------------------------------------------------------------------
----------------------------------------------------AATTATTGTCAAACTTTGACCATAAAAT
GAACTAATAAAATATAAACTATATGTGACAAAACTATATTGTGTGAATTCTCTTTTGAATGCAAATA--CAATTCTGTAA
TTTTTGTATTATATAAATAATACGATGTGACTGAGTTATATAAATGAGCAACATTTGATACAAAATACTAGTAGGG---C
TAATAAACCTTGACGAGGGAGTATCCAAGTAGCCGA------------------------------GCAACACGTTCATC
CACCCTTGAATCACGTGGTACGTTGTTGTCTTCTTTAGCAGCCCAACGTGTTGTCCACTACGAAATCAAGTGTGGCCAAT
TTAGGAGCCACCTCGTGTACCACGCACGCTGCATGCATGCATGTG-CGACATTATCTTCTCTGCATATGCGGCTAGTTAG
CACAAGCAAACAATTTCTCGTGCTCCACGCGTGCATGTGTGAGAGCATCTTATCTTCTCTCCTGCTTGTCTCATGCATGT
GAGAGCATC-TAT-CTCATCTTCTGTCGTGATAAATCTTCCCTATAAATAGGGC-AAGTGTTATGCAAATACTCATATCA
GTCAAGTTCAGAGTAAGCTCGAGGTCCATTTAGCTGGTTAGTAGTGTTGGGTATATATTCCATATTCCATATTTCCATTT
CCATATGCTTTCTGTCAATAAGTTTCTCTGTATGCATCATCCTCAT----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------
>chr1A_606
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------TGTCTCATGCATGT
GAGAGCATC-TAT-CTCATCTTCTCTCGTGATAAATCTTCCCTATAAATAGGGC-AAGTGTTATGCAAATACTCATATCA
GTCAAGTTCAGAGTAAGCTCGAGGTCCATTTAGCTGGTTAGTAGTGTTGGGTATATATTCCATATT-------TCCATTT
CCATATGCCTCCTGCCAATAAGTTTCTCTGTATGCATCATCCTCATACAGAGGCCGGAGTTATCCTTCTTTTCGAAAAAG
GATATATGACTAGCATTAGCGTTATTTTTATGCGTATTCTTAACCAA-AAAAGAAAGACGATTTGATGACCTATTTGGAC
CAACTCTTATTGTGATTTGTAGTCTGAACTGAACTATTTTGATCAATTGTTTGCAGCTCACCGAATCAAGGATGAGCTGC
GCCGCCCCAAAAGCCCCCGCCGGAGAGGAGAATAAGACGTCATGGCCGGAGGTAGTGGGAAAGTCCATCGAGGAAGCCAA
GGAGATCATCCTTAAGGACATGCCTGACACCGACATCGATGTCCTTCCTCTTGGCTCGGCGATGACCCTCGACTTCAGGA
CCAACCGTGTCCGCATCATCGTCGACACTGTCGCGACCACCCCTTCCATTGGTTAGCAAGCTTTGCGAGCGAGAGACAAA
ATGGATGCACTTATGCATGTTGATGAATAAGTAGTTTCAATAATCATGAATGAATAAATACACGCTCACCAATGGCGTGT
GTCGATGTACTTATGGTTCAATTGACTTGACCAGTTATTTTTAATTTATGAGATGTCGGTTTGGTGTTCACGTGTTTACT
AAAACGCTCATGAAATATGCATTACTGCGGGCATGTTGCTGGATTATTTCAACAACTTAGACCTATTGGTGTCATTAGAA
TAAAATATACTAATCACACCATAATCTACTTAGAGAAGAACTCGAGCCCCATGATATATCTTAAATGGATTCTTTCTTGC
TTTGGACAAACTTCTGAGATGAGAATTAGTTTTATTGTGACCGCGTGCCTA-TGAACATTATTGTTGATGAGGCTTAACC
TTTTGCTCAAACCATTT---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------
>chr1B_910
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------ATTTGGTGAACTATTTGGGC
CAATTGTTATTATGATTTGTGGTCTGAACTGAACTATTTTGATAAACTGTTTGCAGCTCACGGAATCGAGGATGAGCTGC
GCCGCCCCAAAAGCCCCCGCCGGAGAGGAGAAGAAGACGTCATGGCCAGAGGTAGTGGGAAAGTCCATCGAGGAGGCCAA
GGAGATCATCCTTAAGGACATGCCTGATGCCAATATCGATGTCCTTCCTGCTGGCTCGGCGATGACCCTCGACTTCAGGA
CCAACCGTGTCCGCATCATCATCGACACTGTCGTGACCACCCCTTCCATTGGTTAGCAAGCTTTGCGAGCGAGAGACAAA
ATGGATGCACTTATGCATGCTGGTGAATAAGCAGTTTCAACAATCATGAATGAATAAATAGACACTTACCAATGGTGTGT
GTCGATGTACTTATGGTTCAATGGACT---CCAGTTATTTATAATTTATGAGATGTCAGCTTGTTGTTCATGTGTTTACC
AAAATGCTCATGAAATATGCAT-ACTGTGTTCATGTTGCTGGATTATTTCAACAACTTAACCCTAATGGTGTCATTAGAA
TGAAATATACTAATCACACCTTACTCTACTTAGAGAAGAACTCGAGCCCCATGAGATATCTTAAATGGATTCTTTCGTGG
TTTGGACAAACTTCTGAGATGAGAATTAGTTTTAGGGTGACCCTGTGCCTA-TCAATATTATTGTTGATGAGGCTTAACC
TTTTGCTCAAACCCTTTGCCGACATATAAGAAACATG-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------
>chr1B_1708
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------GCTGATGAAAGAACTAGATT
TTTCAGAAGATTTATGGATAGAGGATGCTGTTATAGGTGACAAGCTAGTACTCCATGTTATACGATTTATCTTTGTGTGA
GCATATCTCTGTAGCTAGAGTGCTAGGCACTAATGCCACTACACTAAAATTTAC-AAGGA-ATATATATGCTGATACTGC
TGGGCTGTGGCATCAATTATTTGCTGATTGTGAAAGTTTTTGTG-TGAGAAATAAGTAAGATTCATAGTACA--------
---------------TGGATTTTAGAGACGAACGGGGTATTTTCTGTGCATTCTATGTATATAGCTTTGAAAGCTCAGCA
GATGAAATGACCTTGTAGAAAATTTTGGTATGTAAAAGTTCTACTGAAGATCAAAGTATTTCTGCGCTTAACATTCAGAA
ATAGTATCTTAAGTTCTTAACCAGAGATAATCTGAATCATCTATAGTGGTAGTTTGGTACAGGAAAATTGACCATCTTTT
TTTTGCAGTAGAGAAGA---GTAAGGGGATCATATGTTGTTTACGTGTTTCATTGCTCGT
>chr1B_1708
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------GCTGATGAAAGAACTAGA-T
TTTCAGAAGATTTATGGATAGAGGATGCTGTTTTAGGTGCCAAGCTAGTACTCCATGTTATACGATTTATCTTTGTGTGA
GCATATCTCTGTAGCTAGAGTGCTAGGCACTAATGCCAGTGCTCTAAAATTTACAAGGAATATATATATGCTGATACTGC
TGGGCTGTGGCATCAATTATTTGCTGATTCTGAAAGTTTTTGTG-TGAGAAATAAGCAAGATTCATAGTACA--------
---------------TGGATTTTAGAGACGAACGGGTTATTTTCTGTGCATTCTATGTATATAGCTTTGAAAGCTCAGCA
GATGAAATGACCTTGTAGAAAATTTTGGTATGTAAAAGTTCTACTGAAGATCAAAGTATTTCTGCGCTTAACATTCAGAA
ATAGTATCTTAAGTTCTTAACAAGAGATAATCTGAATCATCTATAGTGGTAGTTTGGTACAGGAAAATTGACTATC-TTT
TTTTGCAGTAGAGAAGA---GTAAGGGGATCATATGTTTTTTACGTGTTTCGTTGCTCGT
>chr1B_1708
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------GCTGATGAAAGAACTAGGTT
TTTCAGAAGATTTATGGATAGAGGATGCTATTTTAGGTGACAA-CTAGTACTCCATGCTATGCGATTTATCTTTGTGTAA
GCTTATCTCTGTAGCTAGAATTCTAGGC--------CACTGCTTTAAAATTTAGAAAGGA-ATATATATGCTGAAACTGC
TGGGCTGTGGCATCAATTACTTGCTGATTGTGAAGTTTTTTATG-TGAGAAATAAGCAAGATTCATAGTAGA--------
---------------TGGATTTTAGAGAAGAACGGGGTATTTTCTGTGCATTCTATGTATATAGCTTTGAAAGTTCGGCA
GATGAAATGACCTTGTAGAAAATTTGTGTATGTAAAAGTTCTACTGAAGATCAAAGTATTTCTGCGCTTAACATTCAGAA
ATACTATCTTAAGTTCTTAACCAGAAATAATCTGAATCTTCTATACTGGTAGTGTGGTACGGGAAAATTGACT-TC-TTT
TTTTGCAGTAGAGAAGAAGAGTAAGGGGATCATATCTTTTTTACGTGTTTCGTTGCTCGT
>chrUn_1708
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------GCTGATGAAAGAACTAGGTT
TTTCAGAAGATTTATGGATAGAGGATGCTATTTTAGGTGACAA-CTAGTACTCCATGCTATGCGATTTATCTTTGTGTAA
GCTTATCTCTGTAGCTAGAATTCTAGGC--------CACTGCTTTAAAATTTAGAAAGGA-ATATATATGCTGAAACTGC
TGGGCTGTGGCATCAATTACTTGCTGATTGTGAAGTTTTTTATG-TGAGAAATAAGCAAGATTCATAGTAGA--------
---------------TGGATTTTAGAGAAGAACGGGGTATTTTCTGTGCATTCTATGTATATAGCTTTGAAAGTTCGGCA
GATGAAATGACCTTGTAGAAAATTTGTGTATGTAAAAGTTCTACTGAAGATCAAAGTATTTCTGCGCTTAACATTCAGAT
ATACTATCTTAAGTTCTTAACCAGAAATAATCTGAATCTTCTATACTGTTAGTGTGGTACGGGAAAATTGACT-TC-TTT
TTTTGCAGTAGAGAAGAAGAGTAAGGGGATCATATCTTTTTTACGTGTTTCGTTGCTCGT
>chr1D_1719
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------AACTAGA-T
TTTGAGAAGATTTATGGACAGGGCGTGCTGTTTTAGGTGACAAG----TACTCCAGATTATACAGTATATCTTTATGTAA
GCATATCTCTGTAGCTAGAGTGCTACACGCTAATTACACTGCTCTAAAATTTAGAGAGGATCAG--TATGGTGAAACTGC
TGAGCTATCGCATCGATTGCTTGCTGATTGTGAAGGGTTTTGTCTTGAGGAATGAGCAAGGTTCATGTAGATGACCCCAC
AGAAAAATCATGTATTGGCTTTTAGAGAAGAATGGAGTATTTTCTGTGCATCCTATATTTATAGCTTTGACAGCTCAACA
AGTGAAATGACCATAAAGAAAATTCTGGTTTGTAGAAGGTCCGCTGAAGATTATAGTATTTTTGTGGTTAGCATTCAGAA
ATAGCATCAG-----------CAGAGATAATGTGAATC----ATAGAGGTAGTGTGGTATAGGAAAGTGTCA-------T
TTTTGCAGTAGAAAAGAACCGGT---GGATCATATCTTCCTTGAGTGTTTGGTT------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----S---------------S--------------
-----------------S--S----SS-S----S------S--------------------------S-----S------
-------------------S-------------S-S-----S------S-------------------------SSSSS-
-----------S--------------------------------------------------------------------
-------------------------------------S------------------------------------------
------------------------S----S---------------S----------------------------------
------S---------------S-------------------S-------------------------------------
--------------------------S---------------------------S-------------------------
--------------S-----S-----------------------------------------------------------
---------------------------------S----------------------------------------------
-----------------------------------------------------S--------------------------
--------S----S--------------------------S-----------S---------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------SS-----------------
--------------------------------S--------------------------------S--------------
---------------------------------------S----------------------------------------
---------------------------------------------S--------------------------------S-
----------------------------------------------------------------S---------------
--------S---------------------------------S-------------------------------------
---------------------------S----------------------------------------------------
----S-------------------S-------------SSSSSSSSSSSSSSSSSSSSSS--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------S--------------------------------
-------------------------------------------SSSSS--------------------------------
------SS---------------S---------------------------------------S----S-------S---
S-------S----------------------SS-------S------S----------S-----------S---------
----------------------S----S---------------S-S--------------
>forward_99
-------------------------------------------------------------------------------A
GCTCCCTCCTGACCAATCT-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------
>reverse_1685
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----CCTCAAACCCTTTGCCGACA--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------
