>input_sequence_86520
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----------------------------------------ATGGCCATTTCATCAAATACGGTCGTGGTTTTCATGTTGC
TGCTCAGTACTGCCTTCATGCAGCTTCCTGTGCCAGCTGATGCAAGGAGGCTAGAAGTGAAGGCGCCTATCGTCAGCGTG
CGTCCTCCCTGCACTGGAAGGAGCACTCTGGGGGCGCCTGCGGAGCAAGTCGAGTCGACAACTCCAGGTCATAGCCCTAG
CATTGGCCATAATAGTCCACCAAACTGA----------------------------------------------------
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>chr7D_1_TraesCS7D01G401600
TGTTTGTTCCCTCCACCTAAGACTTGATGAGTTCTGATAGAAGATCCAACTTGCTGTTCTTCCTTAAACTTTGACTGGAA
CATGTCAAGTGAGGCACTTTGATAGTTCAAGTTTGCAAGTTGCATGCTTAATGAGGCTTCCATGACCCCCCAACCCCAAG
TATGCCATACTAGTACAACTGGGTCAACTTGTGCGTTAAACTTAGGTTGTCGAGGAGATCTTTCGTTAGAATAACGGATG
ATATGCTGGTGACTAGATGATTCATAACTGCCTCTTCAGTCTTTGGTAACACTAAATAAAGAAAAGTTAGTAGCTGTTTG
TTTGGTTGATGCACTGGCAAAAAGATTAGTAAATTACCATGCTGGTAAGAAGGATAATTCACATGAAAGTATCACTCCGA
CTGGTCATGGAAACAATATCACACTGATACCTGTCAGGCTGTCACAGAGTTCAGGCCAAACTTGAGGCATATTCACATGC
CATTGCTCTTTTTAATAACCCTCACTTCACTACCTGGAAACAGCCTCTTGCAGAAATGTAGGGAAAGGCTGCGCACAATA
GACCCAAAGTGGTCGGACCCTTCCCCGGACCCTGCGCAAGCGGGAGCTACATGCACCGGGCTGCCCTTTGCCCTCGCTTC
ATACAGTGTTTATCCAGGTAGAAGAAGCTTAGATGTTTCTTAGAATAAAACTGGATTGGGAAAAGGTGTTCCCTTTAGCA
TATAATTCGTGAAAGAAGAAAATATGTTGAGACATCCAAATTGTAAACAATGGGCTGGAGATTGTTGTTATCACCTCCCT
GGTCCTCCCATCACTCGACTCCTTCAAAAGTACCTTTCTTGAACTAAAATAGTGACACAATCTGCATATATAAAGAAGGG
AGCTGGCTCTAGAGGTAAGCCATCTTAGTAGTGAGTGAGTAACTTGTGTCTTCAGCTCTTACTCTTGCCCTCATCCATTG
TTCAAGCTAGCTACCACTAGCTACTTCTCTCATCGATACCATGGCCATTTCATCAAATACGGTCGTGGTTTTCATGTTGC
TGCTCAGTACTGCCTTCATGCAGCTTCCTGTGCCAGCTGATGCAAGGAGGCTAGAAGTGAAGGCGCCTATCGTCAGCGTG
CGTCCTCCCTGCACTGGAAGGAGCACTCTGGGGGCGCCTGCGGAGCAAGTCGAGTCGACAACTCCAGGTCATAGCCCTAG
CATTGGCCATAATAGTCCACCAAACTGAGATGGCCAGCTGCTGCTTCGTTCCATACCAGGACTTTGCAGCTTGGTATATG
ATACTCCTTTGGTGTATTCTCTGTGTGTTTGTTACGAAAGGCATAAGGCATGCGATCGACGCTAGGGGAGATTTTATTTC
CCTTATATTTGTTTTGTCACCAGTGAAACTTGTGCCTGCATTTTCTTTCACTCTTACGTCAAAAACTTTTGCTTACCGT-
-TCTCTGAGGAGGGCCTATTGATCTGTAGCAGTTTGCTTTTAGATTTTTTTTACTCTTCCTATGTTGTAAACTTGAGGAG
GTGTATGTGAGCTTGTTGAAAGTTTTCCTGCAATGATGACGTAAAGTTGAAAGAGATCCATTGTGAATGGCACTTTGGTT
TCCCATCTAAATGGAACAGCTTAGCTCGGTACTGGTCTACTGGATCCATCTATGTAACCGTTGCACAATACCTTCAATAT
AAACATTAAGTTTGTGTAAATTGGTCAAGGCTAAAATAATTGTTAAGCAAGCCCTTAGAATATAGGGGCATACTTTGCTG
AAGGAACAGATA------CACAAACAAGGCGTCATGC-------------------------------------------
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-------------------------------------------------CCAGCCTTTGTTGTTGGTGGTCTTATCAGTG
ATCTGCAGCTGATCCGGCTGAATGTAGCGGAACATTAGCTG-AACATCCATGTACAGGCAGCGCCTGGGGTGACTGCTTC
TTCGTTTTTCTTATGCTTCCTCCCTCTCTTTCTCCATTGTGTTTTCCTCTTGTACATTCCTAATCTATGATGCAAAGGCA
GAGCACCTGCCATTTCCCCCTCAAAAAAGAACAACACAGGTTTGTAAATTGTTTGGTTTCTTACTTCCCTTGGAGCTCTA
TGTACTCGACCATCTATTTTCCTAAC----TTCATTCTTATGGCTGTATTCCTGTTGCGAAGTGAGCTGA----------
--------------TCTTTCCACAATTATTTTGCCTCACCGAGTGTTTTCATTTGCAATTACCCTGAAAATTCATGCCAC
AAAGGATTTAAAAGAATCATAGTATAGTCAATATTGT
>chr7B_1
TGTTTGTTCCCTCCACCTAAGACTTGATGAGTTCTGGTAGAAGATCCAACTTGCTGTTCTTCCTTAAACTTTGACTGGAA
CATGTCAAGTGAGGCACTTTGATAGTTCAGGTTTGCAAGTTGCATGCTTAATGAGGCTTCCATGACCCCC------CAAG
TATGCCATACTAGTACAACTGGGTCAACTTGTGCGTTAAACTTAGGTTGTCGAGGAGATCTTTCGTTAGAATAACGGATG
ATATGCTGGTGACTAGATGATTCATAACCGCCTCTTCAGTCTTTGGTAACACTAAATAAAGAAAAGGTAGTAGCTGTTTG
TTTGATTGATGCACTGGCAAAAAGATTAGTAAATTACCATGCTGGTAAGAAGGATAATTCACATGAAAGTATCACTCTGA
CTGGGCATGGAAACAATATCACACTGATACATGTCATGCTGTCACAGAGTTCAGGCCAAACTTGAGGCATATTCACATGC
CATTG--TTTTTTAATAACCCTCA--------------------------------------------------------
----------------------------------------------------------------------------CTTC
ATACAGTGTCTATCCAGGTAGAAGAAGCTTATATGTTTCTTAGAATAAAACTGGATTGGGAAAAGGTGTTCCCTTAAGCA
TAAAATTCGTGAAAAAA---AATATGTTGAGACATCCAAGTTGTAAACAATGGGCTGGAGATTGTTGTTATCACCTCCCT
GGTCCTCCCATCACTCGACTCCTCTAAAAGTATCTTTCTTGAACTAAAATAATGACACAATCTGCATATATAAAGAAGGG
AGCTGGCTCTAGAGGTAAGCCATCTTAGTAGTGAGTGAGTAACTTGTGTCTTCAGCTCTTATTCTTGCCTGCTTCCATTT
TTCAAGCTAGCTACCACTAGCTACTTCTCTCATCGGTACCATGGCCATTTCATCAAATACGGTCGTGGTTTTCATGTTGC
TGCTCAGTACTGCCTTCATGCAGCTTCCTGTGCCAGCTGATGCAAGGAGGCTAGAAGTGAAGGCGCCTATCATCAGCGTG
CGTCCTCCCTGCACTGGAAGGAGCACTCTGGAGGCGCCTGCTGAGCAAGTCGAGTCGACAACTCCAGGTCATAGCCCTAG
CATTGGCCATAATAGTCCACCAAACTGAGATGGCCTGATGCTGCTTCATTCCATACCAGGACTTTGCAGCTTGGTATATG
ATACTCCTGTGGTGTATTCTCTGTGTGTTTGTTACGAAAGGCATAAGGCATGCGATCGACGCTAGGGGAGCTTTTGTTTC
CCTTATATTTGTTTTGTCACCAGTGAAACTTGTGCCTGCATTTTCTTTCACTCTTACGTGAAAAACTTTTGCTTACCGTT
GTCTCTGAGGAGGGCCTATTGATCTGTAGCAGTTTGCTTTTAGAA-TTTTTTACTCTTCCTATGTTGTAAACTTGAGGAG
GTGTATGTGAGCTTGTTGAAAGTTTTCCTGCAATGATGACGTAAAGTTGAAAGAGATCCATTGTGAATGGCACTTTGGTT
TCCCATCTAAATGGAACAGCTTAGCTCGGTCCTGGTCTACTGGATCCATCTCTGTAACCGTTGCACAATACCTTCAATAT
AAACATTAAGTTTGTGTAAATTGGTCAAGGCTAAAATAATTGTTGAGCAAGCCCTTAGAATATAGGAGCATACTTTGCTG
AAGGAACAGATGCATCTTCACAAACAAGGCCTCATGT-------------------------------------------
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-------------------------------------------------CCAGCCTCTGTTGTTGGTGGTCTTATCAATG
AGCTGCAGCTGATCCGGCTGAATGTAGCAGAACATTAGCAG-AACATCCATGTACGGGCAGCGCCTGGGGTGACTGCTTC
TTCGTTTTTCTTATGCTTCC-CCCTCTCTTTCTCCAATGTGTTTTCCTCTTGTACATTCCTAATCTATGATGCAAATGCA
GAGCACCTGCCATTGTCCCCTCAAAAAAGAATAACACAAGTTTGTAAATTGTTTGGTTTCTTACTTCCCTTGGAGCTCTA
TGTACTCGGCCATCTATTTTCCCAACCAGTTTCATTCTTATGGCTGTATTCGTGTTGCATACACTTGATTCAAACAGCTA
GCCAGGATACACGCTCGTTGCACAATTATTTTGCCTCGCTGAGTGTTTTCATTTGCAATTACCCTGGAAATTCATGCCAC
AAAGGATTTAAAAGAATCATAGTATAGTCAATATTGT
>chr7A_1
TGTTTGTTCCCTCCACCTAAGACTTGATGAGTTCTGATAGAAGATCCAACTTGCTGTTCTTCCTTAAACTTTGACTGGAA
CATGT---------CACTTTGATAGTTCAAGCTTGCAAGTTGCATGCTTACTGAGGCTTCCATGACCCCC------AAAG
TATGCCATACTAGTACAACTGGGTCAACTTGTGCGTTAAACTTAGGTTGTCGAGGAGATCTTTCGTTAGAATAACGGATG
ATATGCTGGTGACTAGATGATTCGTAACTGCCCCTTCAGTCTTTGGTAACACTAAATAAAGAAAAGGTAGTAGTTGTTTG
TTTGATTGATGCACTGGCAAAAAGATTAGTAAATTACCATGCTGGTAAGAAGGATAATTCACATGAAAGTATCACTCTGA
CTGGTCATGGAAACAATATCACACTGATACCTGTCAGGCTGTCACAGAGTTCAGGCCAAACTTGAGGCATATTCACATGC
CATTGCTTTTTTTAATAACCCTCA--------------------------------------------------------
----------------------------------------------------------------------------CTTC
ATACAGTGTCTATCCAGGTAGAAGAAGCTTATATGTTTCTTAGAATAAAACTGGATTGGGAAAAGGTGTTCCCTTGAGCA
TAAAATTCGTGAAAAAA---AATATGTTGAGACATCCAAGTTGTAAACAATGGGCTGGAGATTGTTGTTATCACCTCCCT
TGTCCTCCCATCACTCGACTCCTCTAAAGGTATCTTTCTTGAACTAAAATAATGACAAAATCTGTATATATAAAGAAGGG
AGCTGGCTCTAGAGGTAAGCCATCTTAGTAGTGAGTGAGTAACTTGTGTCTTCAGCTCTTATTCTTGCCCGCTTCCATTG
TTCAAGCTAGCTACCACTAGCTACTTCTCTCATCGATAGCATGGCCATTTCATCAAATACGGTCGTGGTTTTCATGTTGC
TGCTCAGTACTGCCTTCATGCAGCTTCCTGTGCCAGCTGATGCAAGGAGGCTAGAAGTGAAGGCGCCTATCATCAGCGTG
CGTCCTCCCTGCACTGGAAGGGGCACTCTGGAGGCGCCTGCTGAGCAAGTCGAGTCGACAACTCCAGGTCATAGCCCTAG
CATTGGCCATAATAGTCCACCAAACTGAGATGGCCCGATGCTGCTTCGTTCCATACCAGGACTTTGCAGCTTGGTATATG
ATACTCCTGTGGTGTATTCTCTGTGTGTTTGTTACGAAAGGCATAAGGCATGCGATCGACGCTAGGGGAGATTTTGTTTC
CCTTATATTTGTTTTGTCACCAGTGAAACTTGTGCCTGCATTTTCTTTCGCTCTTACGTGAAAAACTTTTGCTTACCGCT
GTCTCCGAGGAGGGCCTATTGATCTGTAGCAGTTTGGTTTTAGATTTTTTTTACTCTTCCTATGTTGTAAACTTGAGGAG
GTATATGTGAGCTTGTCGAAAGTTTTCCTGCAATGATGACGTAAAGTTGAAAGAGATCCATTGTGAATGGCACTTTGGTT
TCCCATCTAAATGGAACAGCTTAGCTCGGTACTGGTCTACTGGATCCATCTATGTAACCGTTGCACAATACCTTCAATAT
AAACATTAAGTTTGTGTAAATTGGTCAAGGCTAAAATATTTGTTAAGAAAGCCCTTAGAATATAGGGGCATACTTTGCTG
AAGGAACAGATGCATCTTCACAAACAAGGCCTCGTGT-------------------------------------------
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-------------------------------------------------CCAGCCTCTGTTGTTGGTGGTCTTGTCAATG
ATCTGCACCTGATCCGGCTGAATGTAGCAGAACATTAGCTGAAACATCCATGTACAGGCAGCCCCTGGGGTCACTGCTTT
TTCGTTTTTCTTATGCTTCCTCCCTCTCTTTCTCCAATGTGTTTTCCTCTTGTACAATCCTAATCTATAATGCAAAGGCA
GAGCACCTGCCATTTTCCCCTCAAAAAAGAATAACACAAGTTTGTAAATTGTTTGGTTTCTTACTTCCCTTGGAACTCTA
TGTACTTGACCATCTATTTTCCTAACCAGTTTCATTCTTATGGCTGTATTCCTGTTGC----------------------
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>chr4B_1771
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------------------CACAAACACGGCCTCATGCCCAGTCTCTGTTGGTGGTGGTGTTGTCAATGATCTGCAGCTCA
TCTGGCTGAATGTAGTAGAACCTTAGCTGAACATCCATGTACAGGCAGCGCCTGGGGTGACTGCTTCTTCGTTTTCCTTT
GCTTCCTCCCTCTCTTTCTCCATTGTGTTCTCCTCTTGTACATTCATAATCTATAACAAAGGCAGAGCGCCTGCCATTTT
CCCTCGGAAAATATATAATATGCTAACTAAATGTTGTAAAGTTCATTCCATTGTGCTGGTCTGCGGAAAAAATGAGCAAA
AAATATTTAAACACTTAACATAGCATGTATCACTTGATGTGGTCAAGAAATCAACATGTTTTCACTGCCTGGAGAAATAA
AAACAACCAGAAACTTTGCGCACTATCTTGACTGAATGACATGGATATTAAAGAGGAAAATCATGAACTGCAACTGCTTA
GAATCTATCACAACTCTTCTAAAAAATTAGATGACAAAAATCAAAATACATAACCATTTCATATACAGATGCACCATTTA
CACAAAAAGGAAGTTGCTGGGCGGCCAAGTGAAATTAGGTTAAGCACCAATTAATTCACCTCACGAGTTTCTCAAATTTG
GTGCATCTTGGTCATCCTACAGTGAATGCAACATTACCATACTATTTGTACAACCTATAACCATGGAGTACTCTGCTAGC
TTTTTCTTTAGAGCTCCAGCATTGTTTCAGGATGACAACAATATACAATCTCTCTCACATGGAACAAATGCTACAAAATC
AGAGTGTAACTAACCCTTCAACTACAAAAGCAGAAAAAAAAACAGTGCCATGACCAATACATCTAAAAGAACTTCGGGAA
TAATGTATTCCCGTAACAGTTGATCTAGAACAAAACAAATATTGTTGTTGTAAATCTATGGTGAAGTAGTAAATCGTAAT
AATCGTAAATCTGAACAAAGAACCAAATGAGCAATTTTTAACAAGCAAGCACAAAGGTGGACGTAAATTTCCATGATACA
TTAAAGGGATGAGGAAAATTACCTTGACTCAGGACTAATATTCCAGATATTTGAATGACCCTAAGTATGAAATTTAGACC
ATATGCTGCTGAGGTTAGAGCACTACCTGTTCCGTTTCTGGCACAAAAACAAATTGAACTCAGCCTGCAGTTAAACACCG
CAGAATAAGACTTCGGAATAAGATCAATAATTTGCGCATGTTGTACAAAGAAATCTATAGCTGAAGCAGGAGATTTGTGA
AAAATTAACATGCTGTTAAAGTAATACAAAAAACAAACTCATAACCTGTGGTGAACATAGCTACATAATGCAGTGGTGCT
GATTCAGCATAAAAGATGATATGTCTAATTCACTGGTGTATTATAGCTGAATACATTACATGTGAACCCAACAGGAATAA
AAGATTAAATTAAATTCCTATATATTAATTTAGGCTATGGTGATAGAGGAACATTTGGACATATTAATTTAGGCTATGGT
GATAGAGGAACATTTGGACAAGTTGTGTATTTTTATTTTTTTCAAGTACCTGCACAAAGAGACACACAGGGAAAATATGG
CTTGAGAGCAACAAAAGATCAAATGAAGCCCTTGTCCATGTCCAGAACTAGTTATATTGAATTTTGATGCTTCACCTAGG
CGTTTACTGCATGAAGAAAAATAATCATGAAGGGTAGCTGCCAAGAATTTTAGATGAAAAATTCATACTTTTTAACAAAT
TCATAACCAGTTTTCTGCTGCACGACATCATATAAAAACTAAGAATAAAGAAAATGAAATGCTTAGAAAATTTCATACAG
CAAACTGATCTTCTCTGCACTGGATATATGCATTCCAGGCTCAGATATACTGCCACCACGCAAAAATCAGGGCAAAACAA
ACTAATTCACCAACAAATTTGGTCAAACTTGGTATAGTCGGGGTCATCCTACTTCCCAGATTAAGGTACAACTGAGCTTT
GTACAAAGAACGTGCATACACTTCTCTTTCACAGTAACTTGTTCTGCATAGGCATGAAGGAGCAACTTACAGTGTGCGGG
TTGTGCAGCTTCTCATTCACCTGCTTTTCATGCTGAAACCACAAGAGGCTCAAGTTAAAACACAGGAGGATATGTAGCAG
ATGTAGCCATCCTTTTTTTTTTCTACATCGCAAGCTAGGTTCCACAAATCGAACAAAAACAGTCCTCTGATGCAGATGCA
CCACCTTGGATCAGCTCGGCACAAGCGCATGATTCGCCTGCATAGGCTGTAGTTGCATATGAGCATATATTTGGTGCAAG
TCGAGGCCTCCTCTAAGCCACATCATCAACACTCTTATACACCTAAACAAACAATCAAAGGATCATTTACTGCAACTGAA
ATATCACTTGTTCAAATTTTGGATAAGCGAACATAAAATAATAAAAGAGCTCCAAATGCAGGTGGATAAGGCAAGATCAT
TTACTGCAACTAAAATATTCACCGATTCCAATGGTGATGGCCATATGACTGAACCAGCAAGGTTTGCAATAAGAAAAGGC
TGACATCGCCAAGGGGAGTAACCATGACTTCCGAAACACATGAAGTTATTTCTTTTTGAGAACTGCATTGAGAAGATGCA
TCCATGGTCTATCTACTTACTATTGACCAATAGCAAAGCAAAAGAACACCTTGCTTCGGTCATGCATTGTAGATTTTGTA
AATAGCTGTGCTGCTAACCAAGCCCTATCTAAGAATCAAGAAACCACGGTTTTACCTAAGGAAGAGCATGAGAATTACTT
GTTCAGAATTTTGGATAGAGTTTTACTGTCAAGTTCAATGGTTTGGATGAAACCTTGGGTAGAGCAACAACCAGTCATAA
ATGCCAAAAGAGCAGGATGAGAACCCATGATGACCTTGGACTGCCTGGAAGAACCCATCCCGACCATGGACTTGCTTCCC
ACTGGCCTGCTCTGCGGGTGATTTGAGCTTGTTTCGTGCATCCACCACTGTTTCGCTGGGCGATGGAAAGCTTACGCCTT
TTTGGCTCTGCTCTGATAGACCTTGCTCCAAAGCTTTTCAATCTGACGAAGAAGGAAGAGCCTGACGGTTGCAGCTGCCC
TCTCGGATGACAGATGGATGAAGGGCCTTCAGCGTATCAACTCTTCTGACGAGATCGATTCCTTCGTGGATCTTTGAATC
GTGGACCGGGGCAGCCAACATGACGACAAATGCGCCCTATGCGATCAGATTATCGAATCTGCAGCTCACCCTCTTTTGTC
AATGCCCTTTCATCGCTGAAATGTGGTTCAAACTTGGCGCTTCAAATCCAGCTATCCAACAAGTAAACATCACATCCTTC
AACTCCATTGGCAAGTGGTGGCCGCACCTTGCTGGAGGGCCAAAGAACACGGCTGTTACAGGGGCATATTTTGCTTGGCA
CATCTGGAACGAAAGGAACAGAGGTATCTTCACAAACACGGCCTCATGCCCAGTCTCTGTTGGTGGTGGTGTTGTCAATG
ATCTGCAGCTCATCTGGCTGAATGTAGTAGAACCTTAGCTG-AACATCCATGTACAGGCAGCGCCTGGGGTGACTGCTTC
TTCGTTTTCCTT-TGCTTCCTCCCTCTCTTTCTCCATTGTGTTCTCCTCTTGTACATTCATAATCTATAA--CAAAGGCA
GAGCGCCTGCCATTTTCCC-------------------------------------------------------------
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>SNPs
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----------------------------------------------------------------------SSSSSS----
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------------------------------------------------------------------S-------------
----S------------------------------------------------------------------------S--
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-------S----------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----
---------S---------------------S-------------------------------------------S----
--S-----------S--SSS-------------------S----------------------------------------
-----------------------SS-------S------------------S----------------------------
-------------------------------------------------------------S--------S-S-------
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-----------------------------------------------------------------------S--------
-------------------------------S---------S--------------------------------------
-----------------------------------S-S------------------------------------------
--------S------------------------------------------------------------------S----
-----------------------------------------------------------S--------------------
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-----------S------------------S-------------------------------------------------
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--------------------------------------------------------S--------------------S--
----------------------------S---------------------------------------------------
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---------------S---------------S------S-----------------------------------------
----------------------------------------------------------SS-SSSSSSSSS----------
----------------S--S-----------------S-S--------------------------S-------------
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>forward_561
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-------------------------------------------------------------GGAAAGGCTGCGCACAATA
G-------------------------------------------------------------------------------
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>reverse_1772
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-----------ACACAAACAAGGCGTCATGC-------------------------------------------------
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