>input_sequence_86515
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----------------------------------ATG-------------------------ATTATTAAAGCAGAAGAT
TGTTCTTTTACCAAACAAATGCAGATCAAACCAC--CTCTT---------------------------------------
------------------------------------------------------------------ATCATAAGAAGAAA
TCTTTCTCGGTATCAATCCCCTTGGC-CCTCATTCTTTGAGAATCGGAATGATCCTTTTCGAGTTTCCATTTCTTCATTT
GAAATCTGGGCTCTTCTGTCTCTGACTT-A--TT---T-TTTTGGCTTTATTCTTTATTTATTTCATTT-GATTTTTTAC
TAA-----------------------------------------------------------------------------
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>chr7A_1_TraesCS7A01G503500
CGGTGCTCGCTTGTTTTCTTGTCTCGATGCTCAACCAAATTGATTATACAAATGTCTTAATTATGTTGGATTTGATCTAT
CG---TTTCATCATGCCCTTTAGACGTACACA---G-TTATATGGTTTTGGCCCTCTAGTTTGTA----CAGTTCTTATC
TGAATATGTGAACTCTTATACTAGATTCTACGTATTTAATA---TGTGAATTA---TTATT---ATATCTTACCTTCTAT
TTTTGTAGGGTCTGGTTCGTATACCATAACAGCAATTGTTGTTGCTGGGCTTATCGGCTATGCATACGTCAGGTGGAAGG
TAAACTCTCATTCTTTTATTTTAGGCCATCCAAGATTACACAACACTGAGGCTGTAA-----------------------
-TTCTAGTTGCAGGCCATTCTGCTTTTTGAAGTCATATCCAGAGTTGCTAATTCACC----TGCTAG---TATCTAAAGT
TCGCGCAATAATTTACAGGGTTGGAAGATTTCTGACATGATGTGGGTGACGAAGCGCGGTCTGGCTGATGCCTGCGATGT
CGTGGGCAAACAGTTAGATGATGTTTCAAATACAGTGCAGGTAAGTTTTTTT--TTTTTTTTTACTGATGTTGCACATTA
TGGACTGT----CTGAACGATGCTG---TACATCCATCTCGACCTTTTCATCTTACATG-------AAGAACAAATATGT
GTCCATTTCAGGTTACGAAGAAACATCTAGCTGTTAGGATCGACCGGGTCGATGCTAATCTAGACGAAACACAAGAAATT
ATCGAAGGGACAAGGGATGAGGTT----GGAACATTCCTGCTGCATAAATATTTCCTTTTCTGGTACTTTTGGATGGTGA
AACGAAACAACGATACCTCTACAGAACCGTACATATGAGTTT--CACCTCATACGGCTCCTCGGTCAGTTCTTTCGAAGG
AATCCTTTTCCTTATTCGAGAATCTCCGCCTTTCTTCCACTCCGGCCCAAAGACTAACTAAGACCAA-CCGAGTCACGTT
TTCATGTTCTAATTGAACACTTTCCATTTGTTATATG-------------------------ATTATTAAAGCAGAAGAT
TGTTCTTTTACCAAACAAATGCAGATCAAACCAC--CTCTT---------------------------------------
------------------------------------------------------------------ATCATAAGAAGAAA
TCTTTCTCGGTATCAATCCCCTTGGC-CCTCATTCTTTGAGAATCGGAATGATCCTTTTCGAGTTTCCATTTCTTCATTT
GAAATCTGGGCTCTTCTGTCTCTGACTT-A--TT---T-TTTTGGCTTTATTCTTTATTTATTTCATTT-GATTTTTTAC
TAAATTTATTTACTGTGTTTGTAGGTCGCAGTGATCCATGTGGATCTGAGCGCCTTTCAGAAGGAGCTCCAAGAAGTCAG
CCGTACGGTTGAAATATGGGTCGGTGCCTTGTACT--GAAACTTGTATA-T------ACCTTGCTT---ATTGGAGCTAC
ATATCACTTACGGGTGCACTTATTTATCTTG---AATATG--------CAGGGGTCAAGGCTGTCTGGTATCGAGGACAC
CCAGGTAAGCACATGTCCAT------CATATACACCCTTCCCCTTCCT-CTAACCCACACCCACACCGTTTT--------
---------------------------------------------TTCGTTAAATGTTCCTGACATTAT---CTACTTTC
AAACCGGTATCAGGATCGTACAGTGCGTGCAACTGAAGCCTTAGTTGGGTTCAGCCAACAACTGGAACATGGTGGCCAGA
ATCCCAATATTCGTCAGGCAA---GTCGGCGGCCCAGCTTATGCAATTCCTTAGTG----GCATGTTGGTTACATGATTA
GGC--TATTGGTTCTGCATCAACTATCGTTGCT------TCTAGAG-----CTCTGAAGAGATATTTTCAATTTTCAGGT
CTCATTGTTCCTTCCAGCTCTAGGATCCTCTTC---AGAGAAAAGGAT---TAAAATGGTAAATTAAACTAACTTTTGTT
TTCGT-ATTAAAATTTTTTTAGGTG-AAATAAAGGCTCTGCCTTTCCAGCCTTTGCTA-CTGGGAATCTAATTTATGTGT
TTCTTGCTGCATGTTACTTTCCTGCAGTTGCCCCAGTCTCCTCTTGTATCTCTTCAACCGGTCGCATCAGTAGCCGAGCC
TAGCGAGGACAAAAGCAAGGTTTGGTTTCAGATTCCTAACATTGCAAACAATGA----CCCCTTT-T-ATCTATGCGTTC
TGTTTGCACAAATCAAGTTGGTTTTGCTGCCT---------------------------TGGATGATGATTTTA-ATTGG
CTCTACT----TGCATTCCAGGAGAACCACAAGGCGTTGCCCTCGAGTGAAGGAAGCATGAGGTGGAAGCTACCTGGACT
TGGGCTTAGCTTCATAAGGAGTTCATCTAATGTATA
>chr1D_3
--GTGCTCGCTTGTTTTCTTGTCTCGATTCTCAACCAAATTGATTATGCAAATGTCTTA----TGTTGGATTCGATCAAT
TG---TTTCA---------------------------TTATATGATTTTGGCCCTCTAGTTTGTA----CAGTTCTTACC
TGAATATGTGAATTCTTATATCTGG---CACATATTTAATA---TGTGAATTA---ATATTGTCATATCTTACCTTCTTT
TTTTGTAGGGTCCGGTTCGTATACCATGTCAGCAATTGTTGTTGCTGGGCTTATCGGCTACGCATACGTCAGGTGGAAGG
TAAACTCTCATTCTTTTA-----GGCGATCCAAGATCACGCAACACCGAGGCTGTAATACTATATATCCTAGATTATG--
-TTCTAGTTGCAGGTCATTCTGCTTTT-GAAGTCATATCCAGAATTACTTATTAGTCACCGTGCCAG---TATCTAAAGT
TCACGCATAAGTTTACAGGGTTGGAAGATTTCTGACATGATGTGGGTGACGAAGCGGGGTCTAGCCGATGCCTGCGATGT
CGTGGGAAAACAGTTAGATGGTGTTTCAAATACAGTACAGGTAAGGTC-TTT--TTTTTTTTTACTGATATTACACATC-
--G-CTGTTGTGCCGAACCA---TGCTATACATCCATCTTGACCTTTTTATCTTACATG-------AAGAACA--TTTAC
GTCCATTTCAGGTTACTAAGAAACATCTTTCCGGGAGGATCGACCGGGTCGATGCTAATCTAGACGAAACACAAGAAATT
ATCGAAGGGACAAGGGATGAGGTT----GGAACATTC-TGCTGCATAAATATTTCCTTTTCTGGTACTTTTAGATAGCGA
AACAAAACAACGATACCTCTAAAGAACCGTACATGAGATTTT--CACCTCAAACGGCTCCTCGGTCAATTCTTTCGAAGG
GATCCTTTATTTTGTTCAAGAGTCTCCGCCCTTCTTTCACTCCACCCCGAAGACTAACTAAGACCAA-CTAAGTCACGCT
TTCATGTTCTAATTGAACACTTCCCATTTATTATATG-------------------------ATC---AAAGAAGAAGAT
TG----TTTACCAAACAAATGCAGATCAAACACGTCTTCTT---------------------------------------
------------------------------------------------------------------GTAATAAGAAGAAA
TCTCTCTCGGTACCAATCCCCTTGCC-CCTCATTCTCTGAGAATCAGAATGATCCTTTTCGAGTTTTCATTTCTTCATTT
GGAATCTGGGCTCTTCTATCTTTGACTT-A--TT---T-TGTTGGCTTTATTTCTTATTTATTTCATTTTGATTTTGTGC
TAA----ATTTACTGTC-TTGTAGGTCGCAGTGATCCATGTGGATCTGAGCGCCTTTCAGAAGGAGCTCCAAGAAGTCAG
CCGTACTGTTGAAATATGGGTAGGTGCCTTGTACC--GAAACATG--TA-T------ACCTTGCTT---AATGGAGCTAC
ATATCACTCTGAAACATG--TATTTATCTTG---AATACG--------CAGGGGTCAAGGCTGTCCGGTATCGAGGACAC
CCAGGTAAGTACATGTCCAT------TATA--CACCCTAACCCTAAACCCTAACCCCCCCACACACCGGTTT--------
---------------------------------------------TTCTTTACATGTTCCTGAAATTAT---CTACTTTC
AAACCTCTATTAGGATCGCACTGTCCGTGCGACAGAAGCGTTGGTTGGGTTCAGCCAACAACTGGAACATGG---CCAGA
ATCCCAATATTCGCCAGGCAA---GT---CGGCCTAGCTTATGCAATACCTGAGGGGCATGCATGTTGCTTACATGATTT
GCTAATAATGGGTCTGCATCAGCTACCGTTCCT------TCTACATTCTTACCCTGAAGAGACATTTTCAATTTTCAGGT
CTCATCGTTCCTTCCAGCTCTAGGATCCTCATC---AGAGCAAAAGAT---CAAAATTGTAAATAAGACTAACCTTTCTT
TTCGT-ATTAAAAGTATTTTTGGTAAAAAAAAAGGCTCTGCCTTTCCAGCTCTTGCCA-CCGGGAATCTAATTTATGCGT
TTCTTGCTGCATGTTACTTTCCTGCAGTTGCCGCAGTCTCCTCTTGTATCTCTTCAAACGGTCGCATCAGTAGCCGAGCC
TAGCGAGGACGAAAGCCAGGTCTGGTTTCAGTTTCCGAACATTGCAAACAATGA----CCCCTTT-T-ATCGATGCACTC
TGTTTACACAAATCAAGTTGGTTTTGCTGCTT---------------------------TGGATGATGATTTTA-ATTGG
CTCTAGT----TGCATTCCAGGACAACCACAAGGCGTTGCCCTCGAGTGAAGGAAGCATGAGGTGGAAGCTACCTGGACT
TGGGCTTAGCTTTCTAAGGAGTTCATCCGATGTATA
>chr1B_3
--GTGCTCGCTTGTTTTCTTGTCTCGATTCTCAACCAGATTGATTATGCAAATGTCTTAATTATGTTTGATTTGATCTAT
CG---TTTCATCATGCCCTTTAGACGTACACGGTTAATTATATGATTTTGGCCCTCTG----GTTTGTAGAATTCTTTTC
TGAATATGTGAATTCTTATAGCTGG---TACATATTTAATACTATGTGAATTATTATTATT---ATATCTTACCTTCTTT
TTTTGTAGGGTCTGGTTCGTATACCGTAATGGCAATTGTTGTTGCTGGGCTTATCGGCTACGCATACGTCAGGTGGAAGG
TAAACTCTCATTCTTTTG-----GGCGATCCAAGATTACGCAACACCGAGGCTGTAATACTAT----CCTAGATTA----
-TTCTAGTTACAGGTCATTCTGCTTTT-GAAGTCATGTCCAGAATTGCTAAT---TCACCGTGCCAG---TATCTAAAGT
TCGCGCAATAATTTACAGGGTTGGAAGATTTCGGACATGATGTGGGTGACGAAGCGCGGTCTGGCCGATGCTTGCGATGT
CGTGGGTAAACAGTTAGATGATGTTTCAAATACAGTACAGGTAAGGTC-TTTCTTTCTTTCTTGCTGATGTTGCACATC-
--GACTGTTGTGCCGAACATATATG-----------------------TATCTTACATGCATGAAGAAGAACA--TATAT
GTCCATTTCAGGTTACCAAGAAACATCTCGCTGGAAGGATCGACCGGGTCGATGCTAATCTAGACGAAACACAAGAAATT
ATCGAAGGGACAAGGGATGAGGTTCGTTGGAACATTCCTGCTCCATAAATATTCCCTTTTCTGGTACTTTTGGATGGCGA
AACGAAACAGCAA-------------------------------------------------------------------
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-----------------------------------------------------------------------------CAC
TAAATTTATTTACTGTCTTTGTAGGTCGCAGTGATCCATGTGGATCTGAGCGCCTTTCAGAAGGAGCTCCAAGAAGTCAG
CCGTACGGTTGAGATATGGGTAGGTGCCTTGTACC--GAAACATG--TA-TGTATATACCTTGCTT---TCTGGAGCTAC
ATATCACTCACGGTTGCACTTATTTATCTTGTTGAATATG--------CAGGGGTCAAGGCTGTCTGGTATCGAGGACAC
CCAGGTAAGTACACGCCCAT------TATA--CTGTTATCTACTAC----------------------------------
---------------------------------------------TACTTTACATGTTGCTGATTTTATCTACTACTTTC
AAACCTGTATCAGGATCGTACCGTGCGTGCAACCGAAGCCTTGGTTGGGTTCAGCCAACAACTGGAACATGGTGGTGG--
------ATATTCGCCAGGCAA---GTCGTCGGTCTATCTTATGCAATTCTTTACTG----GCGTGTTGCTTACATGATTC
GCTA---CGGGTTCTGCATCAACCACCG-TACT------TCTAGAGTCTTACTTTGAAGAGATATTTTCAA-TTTCAGGT
CTCATCGTTCCTTCCAGCTCTAGGATCCTCCCCTTCAGAGCAAAACATTAATAAAATGGTAAATAAGACTAAACTTTGTT
TTTGT-ATTCAAAGTAAAGGCT-------------CTGTTCTTTTCCAGCTCTTGCCA-TCAGAAACCTAATATATGTGT
TTCTTGCTGCATGTTACTTTCCTGCAGCTGCCGCATTCTCCTCTTGTATCTCTTCAAATGGTCGCATCAGTAGCCGAGCC
TAGCGAGGACGAAAGCCAGGTTTGGTTTCAGTTTTCTAACTTTGCAAACAATGATGATCCCTTTT-T-ATCAATGTGCTC
TGTTTACACAAATTAAGTTGGTTTTGCTGCTT---------------------------TGGATGATGATTTTA-ATTGG
CTCTAGTTGCATGCATTCCAGGAGAATCACAAGGTGTTGCCCTCGAGCGAAGGAAGCATGGGGTGGAAGCTACCTGGACT
CGGACTTAGCTTTCTAAGGAGTTCATCTAATGTATA
>chr1A_3
--GTGCTCGCCTGTTTTCTTGTCTCGGTTCTCAACCAAATTGATTATGCAAATGTGTC--TTATGTTGGATTTGATCTAT
CGTTTTTTCATCATGCCCTTTAGACGTCGTACATGG-TTATATGATTTTGGCCCTCTAGCTAGTTTGTACAATTCTTATC
TGAATATGTGAATTCCTATAGCTGG---TAAGTATTTAATA---TGTGAATTATTATCATATCTTAG--TTACCTTCTTC
TTTTGTAGGGTCTGGTTCCTATACCATAACAGCAATTGTCGTTGCTGGGCTTATCGGCTACACATACATCAGGTGGAAGG
TAAACTCTCATTGTTTTA-----GGCGATCCAAGACTACACAACACTGAGGCTGTAATACTAT----CCTAGATTATTTC
CTTCTAGTTGCAGGTCATTCTGCTTTT-GAAGTCAT--CCAGAATTGCTAATTATCACCATGCTAGTATATATCTAAAAT
TCGCGCGATAATTTACAGGGTTGGAAGATTTCTGACATGATGTGGGTGACGAAGCGCGGTCTAGCCGATGCCTGTGATGT
CGTTGGAAAACAGTTAGATGGTGTTTCAAATACAGTACAGGCAAGGTC------CTTTTTTTTACTGATATTGCACATC-
--GACTGTTGTGCCGAACCA---TGCTATACATCCATCTTGACCTTTTTATCTTA----CATGAAGAAGAACA--TATAC
GTCCATTTCAGGTTACTAAGAAACATCTTTCCGGAAGGATCGACCGGGTCGATGCTAATCTAGACGAAACACAAGAAATT
ATCGAAGGGACAAGGGATGAGGTT----GGAACATTCCTGCTGCATAAATATTTCCTTTTCTGGTACTTTTGGATGGCGA
AACGAAACAACGATACCTCTACAGAACCATACATGACATCTT--CACCTCATACGGCTCCTCGGTCAATTCCTTTGAAGG
AACC-----------------------------------------------------CTAAGGCCAA-CTAAGTCACGTT
TTCATGTTCTAATTGAACACTTTCCATTTAATCATAATTGAAAACTTTCCATTT---ATCATATGATT----AAGAAGAT
TGTTCTTTTACCAAGAAAATGCAGATCAAATCAT--GTCTTATACTCCCTCCGTCCGGAAAAACTTGTCCCTCAAATGGA
TGTATCTAGCACCAAGTTAGTGTTAGATACATCCATTTGAGGGACAAGCTTTTCCAGACGGAGGGAGTAATAAGAAGAAA
TCTTTCTCGGTATCAATCCCCTTGCC-CCTCATTCTTTTAGAATCATAAGGATCGTTTTCGAGTTTCCATTTATTCATTA
GGAATCTGGGCTCGTCTATCTTCGACTT-A--AATTAT-TTTTGGCTATATTCTTTATTTATTTCATTTTGGTTTTGCAC
TAAATTTATTTACTGTC-TTGTAGGTTGCAGTGATCCATGTGGATCTGAGCGCCTTTCAGAAGGAGCTCCAAGAAGTCAG
CCGTACGGTTGAAATATGGGTACGTGCCTTGTACT--GAAACATG--TA-A------AACTTGCTTAC-TCTGGAGCTAC
ATATCACTCACGGGTGCACTTATTTATCT---------TG--------CAGGGGTCAAGGCTGTCTGGTATCGAGGACAC
CCAGGTAAGTACATGTCCAT------TATT--CGCCCTTCCCCTTCT--------------------GTTTT--------
---------------------------------------------TCCTTTACATGTTCCTGATATTATCTAG---TTTC
AAACCTGTATCAGGATCGTACTGTGCGTGCAACTGAAGCCTTGGTTGGGTTCAGCCAACAATTAGAACATAGTGGCCAGA
ATCCCAATATTCGTCAGGCAA---GTCGTCGGCCTAGCTTATGCAATTCCTTAGTG----GCATGTTGCTTACATGATTC
GCTA---CTGGTTCTGCATCAACTGCCA-TACT------TCTAGATTCTTAGTCTGAAGAGACGTTTTCAATTTTCAGGT
TTCATCGTTCCTTCCAGCTCTAGGATCCTCATC---AGAGCAAAAGAT---CAAAATTGTAAATAAGACTAACCTTTGTT
TTCGT-ATTAAAAGTTTTTAAGGTG-AAAAAAAGGCTCTGCCTTTCCAGCTCTTGCCA-CCGGGAATCTAATTTATGCAT
TTCTTGCTGCATGTTACTTTCCTGCAGTTGCCGCAGTCTCCTCTTGTATCTCTTCAAACGGTCGCATCAGTAGCTGAGCC
TAGCGAGGACGAAAGCCAGGTTTGGTTTCAGTTTCCGAACATTGCAAACAATGA----CCCCCTTAT-ATCGATGCGCTC
TGTTTACACAAATCAAGTTTGTTTTGCTGCCT---------------------------TGGATGATGATTTTTGATTGG
CTCTCTT----TGCATTCCAGGAGAACCACAAGGTGTTGCCCTCGAGCGATGGAAGCATGAGGTGGAAGCTACCTGGACT
TGGACTTAGCTTTCTAAGGAGTTCATCTGATGTATA
>chr1B_133
--------------------------------------------------------------------------------
----------------------------------------------------------------TTTTACAAATCTTATC
TGAATATGTGAATTCTTATAGCTGG---TACGTATTTAATA---TGTGAATTACTATTATT---ATATCTTACCTTCTTT
TTTTGTAGGGTCTGGTTCGTATACCATAACAGCAATTGTTGTTGCTGGGCTTATAGGCTACGCATACGTCAGGTGGAAGG
TAAACTCTCATTCTTTTA-----GGTGACCCAAGATTACACAACACCGAGGCCGTAATGCTAT----CCTAGATTATTTC
CTTCTAATTGCAGGTCATTCTGTTGTT-GAAGTCATATCTAGAACTGCAAAT---TCACCGCGCTAG---TATCTAAATT
TCACGCGATAATTTACAGGGTTGGAAGATTTCTGACATGATGTTGGTGACGAAGCGCGGTCTAGCCGATGCCTGCGATGT
CGTGGGTAAACAATTAGATGATGTTTCAAATACAATACAGGTAAGGTA------TTTTTTTTTACTGATGTTGCACATTA
TCGACCGTTGTTCTGAACCATGCTG---TACATCCATCTTGACCTTTTCATCTTA----CATGAAGAACAT-A--TATGT
GTCCATTTCAGGTTACGAAGAAACATCTTTCCGGGAGGATCGACCGGGTCGATGCTAATCTAGATGAAACACAAGAAATT
ATCGAAGGGACAAGGGATGAGGTTCGTCGGAACATTTTTGCTGCATAAATATTTCC-TTTCTGGTACTTTTGGATAGCGA
AGCGAAACAATGAGACCTCTACAGAACCGTACATGACATTTTCACACCTCATACGGCTCCTCGGTGAATTGTTTCAAAGG
GATCATTTTCCTCATTCGAGAGTCTTCGTCCTTCTTCCACTCCATCCCGAAGACTAACTAAGACCAA-CTGAGTCACATT
TTCATGTTCTAATTGAACACTTTA-------------------------CATTT---ATCATATAATTAAAGAAAAATAT
TGTTCTTGTACCGAACAAATGCAGATTAAATCAC--GTCTT---------------------------------------
------------------------------------------------------------------ATTATAAGAAGAAA
CCTTTCTCGGTTTCAATCCCCTTGCC-C-TCATTCTTTGAGAATCATAATGATACTTTTTGAGTTTCCATTTATTCATCT
GCAATCTGGACTCTTCTATCTTCGACTTGATTTT---T-TTTTGGCTTTATTCCTTATTTATTTCATTTTGATTTTTTAC
TAAATTTATTTACTGTCTTTGTAGGTCGCAGTGATCCATGTGGATCTGAGCGCCTTTCAGAAGGAGCTCCAAGAAGTCAG
CCGTACGGTTGAGATATGGGTAGGTGCCTTGTACCCTGAAACATG--CA-T------ACCTTGCTT---ACAGGAGCTAC
ATATCACTCACGGGTGCACTTATTTATCT---------TGAATA--TGCAGGGGTCAAGGCTGTCTGGTATCGAGGACAC
CCAGGTATACA------------------------------CCTTCCT-CCAACCCACACCCACACCGTTTT--------
---------------------------------------------TACTTTACATGTTCCTGATGTTATCTACTACTTTC
AAACCTGTATCAGGATCGTACCGTGCGTGCAACCGAAGCCTTGGTTGGATTCAGCCAACAACTGGAACATGGTGGCCAGA
ATCCCAACATTCGTCAGGCAA---GTCGTCGGCCTAGCTTATGCAATTCCTTAGTG----GCATGTTGCTTACATGATTT
GCTA---CCGGTTCTGCATCAACCACAGTACTTCTCGAGTCTAAACCCTAACTCTGAAGAGATATTTTCAA-TTTCAGGT
CTCATCGTTCCTGCCAGCTCTAGGATCCTCCTCTTCAGAGCAAAGCATCAATAAAATGGTAAATAAGACTAACCTTGGTT
TTTTTAATTCAAAGTAAAGGCT-------------CTGTTCTTTTTCAGCTCTTGCCATTCAGAAACCTAATATATGTGT
TTCTTGCTGCATGTTACTTCCCTGCAGCTGCCGCCGTCTCCTCTTCCGTCTCTTCAAACGGTCAAATCAGTAGCCGAGCC
TAGCGAGGACGAAAGCCAGGTTTGGTTTCGGTTTCCTAACATTGCAAACAATGA----CCCCTTT-T-AGACA--CGCTC
TGTTTACACAAATCAAGTTGGCTTTGCTGCCT---------------------------TGGATGATGATTTTA-ATTGG
CTCTACT----TGCGTTCCAGGAGAACCACAAGGTGTTGCCCTCGAGTGAAGGAAGCATGAGGTGGAAGCTACCTGGACT
TGGGCTTGGCTTTCTGAGGAGTTCATCTGATGTATA
>chr1B_133
--------------------------------------------------------------------------------
----------------------------------------------------------------TTTTACAATTCTTATC
TGAATATGTGAATTCTTATAGCTGG---TACGTATTTAATA---TGTGAATTA---ATATC---ATATCTTACCTTCTAT
TTTTGTAGGGTCTGGTTTGTATACCATAACAGCAATCGTTGTTGCTGGGCTTATCGGCTACGCATACGTCAGGTGGAAGG
TAAACTCTCATTCTTTTG-----GGCGATCCAAGATTACGCAACACCGAGGCTGTAATACTAT----CCTAGATTA----
-TTCTAGTTGCAGGTCATTCTGCTTTT-GAAGTCATGTCCAAAACTGCAAAT---TCACCGCGCTAG---TATCTAAAGT
TCGCACGATAATTTACAGGGTTGGAAGATTTCTGACATGATGTGGGTGACGAAGCGCGGTCTGGCTGATGCCTGCGATGT
CGTGGGTAAACATTTAGAT-ATGTTTCAAATAGGTAAGGTG--------------TTTTTTTTACTGATGTTGCACATCA
TCGACAGTTGTTCTGAACCATGCTGCTATACATCCATCTTGACCTTTCCATCTTA----CATGAAGAACAT-A----TAT
GTCCATTTCAGGTTACCAAGAGACATCTAGCTGGCAGGATCGACCGGGTCGATGCTAATCTAGACGAAACACAAGAAATT
ATCGAAGGGACAAGGGATGAGGTT----GGAACATTCCTACTGCATAAATATTTCCTTTTCTGGTACTTTTGGATGGCGA
AACAAAAGAATGACGCCTCTACAAAACCGTACATGACATTTTCACT--TCATACAGCTCCTCAGTCAATTCTTTCGAAGG
GATCCTTTTCCTCGTTCGAGAGTCTCCGCCCTTCTTCCACTCCATCCTGGAGACTAACTAAGACCAAACCGAGTCACGTT
TTCATGTTATAATTGAACACTTTCCATTTAATCATAATTGAACACTTTCCATTT---ATCATATGATTAAAGAAGAAGAT
TGTTCTTTTACCAAACAAATGTAGATCAAATCAC--GTCCT---------------------------------------
------------------------------------------------------------------ATGATAAGAAGAAA
TCTTTCCCGGTATCAATCCCCTTGCCAC-TCATTCTTTGAGAATCAGAAGGATCCTTTTCGAGTTTTCATTTCTTCATTT
GGAATCTGGGCTCTTTTATCTTCGACTT-G--TT---T-TACTGACTTTATTATTTATTTATTTTATTTTGATTTTTTAC
TAAATTTATTTACTGTC-TTGTAGGTCGCAGTGATCCATGTGGATCTGAGCGCCTTTTAGAAGGAGCTCCAAGAAGTCAG
CCGTACGGTTGAGATATGGGTAGGTGCCTTGTACCCTGAAACATG--CA-T------ACCTTGCTT---ACATGAGCTAC
ATATCACTCACGGGTGCACTTATTTATCT---------TGAATATA--CAGGGGTCAAGCCTGTCTGGTATCGAGGACAC
CCAGGTAAGTACACGCCCATGCCCATTATA--CTGTTATCTACTACTCTCTCAGTTCCAAAACAGATGACCAACTTTGTA
CTAAGTTAGTACGAAGTTGGGTCATCTATTTTGAAACGGAGGGAGTACTTTACATGTTGCTGATTTTATCTACTACTTTC
AAACCTGTATCAGGATCGTACCGTGCGTGCAACCGAAGCCTTGGTTGGGTTCAGCCAACAACTGGAACATGGTGGCCAGA
ATCCTAATATTCTTCAGGCAAGTGGT---CTGCCTAGCTTATGCAATTCTTTAGTG----GCATGTTGGTTACATGATTC
GCTA---TTGGTTCTGCATCAACTACCGTTACT------TCTAGAGTCTTACTTTGAAGAGATATTTTCAA-TTTCAGGT
CTCATCATTCCTTCCAGCTCTAGGATTCTCCTCTTCAGAGCAAAACATTAATAAAATGGTAAATAAGACCAACCTTTGTT
TTTGT-ATTCAAAGTAAAGGCT-------------CTTTTCTTTTCCAGCTCTTGCCA-CCGGGAATCTAATTTATGTGT
TTCTTGCTGCATGTTACTTTCCTGCAGTTGCCGCAGTCTCCTCTTGTATCTCTTCAAACGGTCGCATCAATAGCCGATCC
TAGCGAGGACGAAAGCCAGGTCTGGTTTCAGTTTCTGAACATTGCAAACATTGA----CCCCTTT-TTATCGATGCACTT
TGTTTACACAAATCAAGTTGGTTTTGCTGCCT---------------------------TGGATGATGATTTTA-ATTGG
CTCCAGT----TGCATTCCAGGAGAACCACAAGGTGTTGCCCTCGAGTGAAGGAAGCATGAGGTGGAAGCTGCCTGGACT
TGGGCTTAGCTTTCTAAGGAGTTCATCTAATGTATA
>chr1B_689
--------------------------------------------------------------------------------
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-----------------------------------AGGATCGACCGGGCCGATGCTAATCTAGACGAAACACAAGAAATA
ATCAAAGGGAGAAGGGATGAGGTT----GGAACATTCCTGCTGCATAAATATTTTCCTTTCTTGTACTTTTGGATGGTGA
AACGAAACAGCGATACCTCTACGGAACCGTACATGAGATTTT--CACCTCATACGGCTCCTCGGTCAATTCTTTCGAAGG
GATTCGTTTCCTCATTCGAGAGT----------------CTCCACCCTGAGGACTAGCTAAGACCAA-CTGAGTCACGTT
TTCATGTTCTAATTGAACACTTTCCATTTAATCATAATTGAACACTTTCCATCT---ATCATATGATTAAGGAAGAAGAT
TGTTCTTTTACCAAACAAATGCAGATCAAACCAC--CTC-----------------------------------------
------------------------------------------------------------------ATCATCAAAAGAAA
ATTTTCTCAGTATCAATCCCCTTGCCCC-TCATTCTTTGAGAATGAGAAGGATCCTTTTCGAGTTTTCATTTCTTCATTT
GGAATCTAGGCTCTTCTATCCTCGACTT-A-TTT---T-TTTTGGATTTATCATTTATTTATTTCATTTGGATTTTTTAC
TAAATTTATTTACTATC-TTGTAGGTCGCAGTGATCCATGTGGATCTGAGCGCCTTTCAGAAGGAGCTCCAAGAAGTCAG
CCGTACGGTTGAAATATGGGTAGGTGCCTTGTACCCTGAAACATG--TA-T------ACCTTGCTT---ACTGGAGCTAC
ATATCACTCTGAAACATG--TATTTATCTTG---AATACG--------CAGGGGTCAAGGCTGTCCGGTATCGAGGACAC
CCAGGTAAGTACATGTCCAT------TACA--CACCCTTTCCCTTCAT-CTAACCCACACCGACGCCGTTTT--------
---------------------------------------------TTCTTTACATGTTGCTGATATTAT---CTACTTTC
AAACCTGTATCAGGATCGTACTGTGCGCGCAATTGAAGCCTTGGTTGGGTTCAGCCAGCAACTGGAACATGGTGGCCATA
ATCCCAATATTCGTCAGGGAA---GT---CGGCCTAGCTTATGCAATTCCTTAGTG----GCATGCTGCTGACATGATTT
GCTA---GTGGTTCTGCATCAACCACCGTACTTCTCGAGTCT------TAACTCTGAAGAGATATTTTCAA-TTTCAGGT
TTCATCGTTCCTTCCAGCTCTAGGATCCTCATC---AGAGCAAAAGAT---CAAAATTGTAAATAAGACTAACCTTTGTT
TTCGT-ATTAGAAGTTTTTTAGGTG-AAAAAAAGGCTCTGCCTTTCCAGCTCTTGCCA-CCGGGAATCTAATTTATGTGT
TTCTTGCTGCATGTTACTTTCCTGCAGTTGCCGCAGTCTCCTCTTGTATCTCTTCAAACGGTCGCAA-------------
----------GAAAGCCAGGTTTGGTTTCAGATTCCGAACATTGCAAACAATGA----CCCCTTT-T-ATCGATGCACTC
TGTTTACACAAATCAAGTTGGTTTTGCTGCCT---------------------------TG-------------------
-------------CATTCCAGGAGAGCCACAAGGTGTTACCCTCGAGTGAAGGAAGCATGAGGTGGAAGCTACCTGGACT
TGGGCTTAGCTTTCTAAGGAGCTCATCTGATGTATA
>chr1A_689
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------AGGATCGACCGGGCCGATGCTAATCTAGACGAAACACAAGAAATA
ATCAAAGGGACAAGGGATGAGATT----GGAACATTCCAGCTGCATAAATATTTCCCTTTCTTGTACTTTTGGATGGCGA
AACGAAACAGTAATACCTCTACAGAACCGTACATGAGATTTA--CACCTCATACGACTCCTCGGTCAATTCTTTTGAAGG
GATTCATTTCTTCGTTCGAGAGT----------------CTCCACCCTGAAGACTAACTAAGACCAA-CTAAGTCACGTT
TTCATGTTCTAATTGAACACTTTCCATGTAATCATAATTGAACACTTTCCATTTATCATCATATGATTAAAGAAGAAGAT
TGTTCTTGTACCAAGCAAATGCAGACCAAATCAT--TTCTT---------------------------------------
------------------------------------------------------------------ATAATTAGAAGAAA
TCTTGCTTGGTATCAATCCCCTTGCCCC-TCATTCTTTGAGAAACGGAAGGTTCCTTTCCGAGTTTCCATTTCTTCATTT
GGAATCTAGGCTCTTTTATCTTTGAATT-ATTAT---T-TTTTGGCTTTATTCTTTATTTGTTTCATTTTGGGTTTTTAC
TAAAAAAAATTACTGTC-TTGTAGGTCGCAGTGATCCATGTGGATCTGAGCGCCTTTCAGAAGGAGCTCCAAGAAGTCAG
CCGTACGGTTGAAATATGGGTAGGTGCCTTGTACC--GAAACATG--TA-T------ATACCTTGCTTAATTGGAGCTAC
ATATCACTCAAGGGTGCACTTATTTATCTCA---------AATA--TGCAGGTGTCAAGGCTGTCTGATATCGAGGACAC
TCAGGTAAGTGCATGTCCAC------TATA--CACCCTTCCCCTTCCT-CTA------ACCCACACCATTTT--------
---------------------------------------------TCCTATATATGTTCCTGATATTAT---GTACTTTC
AAACCTGTATCAGGATCGTACTGAGCGTGCAACAGAAGCCTTGGTTGGGTTCAGCCAACAACTAGAACATGGTGGCCAGA
ATCCCAATATTCGCCAGGCAA---GTTGGCGGCCCAGCTTAAGCAATTCCTTAGTG----GCATGTTGCTTACATGATTC
GCTA---CTGGTTCTGCATCAACTACCGTTACT------TCTAGAGTCATACTCTGAAGAGATATTTTCAATTTTGAGGT
CTCATCATTCCTTCCAGCTCTAGGATCCTCTTT---AGAGCAAAAGAT---TAAAATGGTAAATTAAACTAACCTTTGTT
TTCGT-CTTAAAAGTTTTTTAGGTG-AAAAAAAGGCTCTGCCTTTCCAGCTTTTGCCA-CCGGGAATCTAATTTATGTGT
TTCTTGCTGCATGTTACTTTCCTGTAGTTGCCCCAGTCTTCTCTTCTATCTCTTCAAACGGTCGCATCAGTAGCCGAGCC
TAGCGAGGACGAAAGCAAGGTTTGGTTTCAGATTCCTAACATTGCAAACAATGA----CCCCTTT-T-ATCTATGCGCTC
TGTTTACACAAATCGAGTTGGTTTTGCTGCCTTGGATGATGATTTTAATTGGCTCTAGTTG-------------------
-------------CATTCCAGGAGAATCACAAGGTGTTGCCCTCGAGCGAAGGAAGCATGAGGTGGAAGTTGCCTGGACT
TGAGCTTAGCTTCATACGGAGTTCATCTAATGTATA
>chr1A_689
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-----------------------------------AGGATCGACCGGGTCGATGCTAATCTAGACGAAACACAAGAAATA
ATCAAAGGGACAGCAGATAAGGTT----GGAACATTCCTGCTGCATAAATATTTCCCTTTCTTGTACTTTTGGATGGCGA
AATGAAACAGCGATACTTCTACAGAACCGTACATGAGATTTT--CACCTCATACGGCTCCTCGATCAATTCTTTCGAAGG
GATTCGTTTCCTCGTTCGAGAGT----------------CTCCACCCTGAAGACTAACTAAGACCAA-CTGAGTCACATT
TTCATGTTCTAATTGATCACTTTCGATGTAATCATAATTGAACACTTGCCATTTATCATCATATGATTAAAGAATAAGAT
TGTTCTTTTACCAAGCAAATGCAGACTAAATCGT--TTCTT---------------------------------------
------------------------------------------------------------------ATAATAAGAAGAAA
TCTTGCTCGGTATCAATCCCCTTGCCCC-TCATTCTTTGAGAATCGGAATGATCCTTTTCGAGTTTTCATTGCTTCATTT
GGAATCTGGTCTCTTCTATCTCTGACTT-A--AT---TATTTTGGCTTGATTCTTTATTTATTTCATTTTGATTTTGTAC
TAAATTTA----CTATC-TTGTAGGTCACGGTGATCCAGGTGGATCTGAGCGCCTTTCAGAAGGAGCTCCAAGTAGTCAG
CCGTACGGTTGAAATATGGGTAGGTGTCTTGTACT--GAAATATGGGTATT------ACCTTGCGT---ACTGGAGCTAC
ATATCACTCACGGGTGCACTTATTTATCT---------TGTTAAATTGCAGGGGTCAAGGCTGTCTTGTATCGAGGACAC
ACAGGTAAGTACATGTCCAT------TATA--CACCCTTCCTCTAACT-AAGACCCGCACC----------T--------
---------------------------------------------TTTTTTACATGTTCCTGATATTATCTACTACTTTC
AAACCGGTATCTGGATCGTACCGTGCGTGCAACAGAAGCCTTGGTTGGGTTCAGCCAACAACTGGAACATGGTGGCCAGA
ATCCCAATATTCGTCAGGCAA---GTCGTCGGTCTAGCTTATGCAATTCCTTAGTG----GCATGTTGCTTACATGATTT
GCTA---CCGGTTCTGCATCAGCCACCGTACTTCTCGAGTCT------TAACTCTGAAGAGATATTT-CAATTTTCAGGT
CTCATCATTCCTTACAGCTCTAGGATCCTCCTCTTCAGAGCAAAACATTAATAAAATGGTAAATAAGACTAACCTTTGTT
TTTGT-ATTCAAAGTAAAGGCT-------------GTGTTCTTTTCCAGCTTTTGCCA-TCAGAAACCTAATATATGTGA
-TCTTGCTGCATGTCACTTT-----------------------------------------------------CCGAGCC
TTGCGAGGACGAAAGCCAGGTTTGGTTTCAGTTTCCTAACATTGCAAACAGTGA----CCCCTTT-T-ATCGATGCGATC
TGTTTACACAAATCAAGTTGGTTTTGCTGCCTTG----------------------------------------------
-------------CATTCCAGGAGAGCCACAAGGTGTTACCCTCGAGTGAAGGAAGCATGAGGTGGAAGCTACCTGGACT
TGGGCTTAGCTTTCTAAGGAGTTCATCTGATGTATA
>SNPs
SS--------------------------S------------------S--------------------------------
-------------------------------S------------S-----------------------------------
------------S-------SSS-SSSS----------------------------------------------------
------------------------------------------------------------S-------------------
------------------SSSSS---S-----------------------------------------------------
--------------S------------S---------------S---------SS-------------------------
--------------------------------------------------------------------------------
------S-----------------------------S--------S-SS-------------------------------
-S----------------S--------------------S---------------------------------SS-----
---------------------------------SS---------------------------------------------
--------------------------------------------------------------------------------
----------------------------------SS--S----------------------------S------------
---------------------S--------S------------SS---S-------------------------------
-----------------------------S----------------------------------S-------S-------
--------------------------------------------------------------------------------
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------------------------S-------------------------------------------------------
-S---------------S--------------------------------------------------------------
----------------S---------------------------------------------------------------
---------------------S--------------------S--SS---------------------------------
--------S-----------------------------------------------------------------------
--------------------------S---SS------------------------------------------------
------------------------------------------------S---S----------S----------------
---------------------S--------------------S-------------------------------------
-------------------------------------------------------------------------------S
-SS----------------------S----S-------------------------------------------------
-----S----------------------------------S--------------------------------S------
-------------S---------------S--------------------S-----S---S-------------------
---------------------------------------------------------S----------------------
----------S------------------------------------------------------------------S--
-----S--------------------------------------------------------------------------
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------------------------------------
>forward_301
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-----------------------------------------TTGCTGGGCTTATCGGCTAT-------------------
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>reverse_1711
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------------------------------TACACCCTTCCCCTTCCTCT------------------------------
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------------------------------------
