>input_sequence_86489
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----ATGGCGCTGGAAAAGGTGATCCACATGGCCGTCATCGAGGTGAACGAGGAAGGCACAGAGGCGGCGGCCGCCAC--
-------TTACATGACGCGCCTTGGATGCACACCGGACTCGCGGCCGCCTGCACC----------GTGTGTGGACTTCGT
GGCTGACCATCCATTTGCCTTCTTCATCGTCGAGGAGGTGTCAGGCGCGATTCTGTTCGCGGGG-CATGTCCTTGATCCC
ACCATCAAGTGA--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------
>chr2D_1_TraesCS2D01G036000
GCCGGGCTCTCGCTGGTAGCCGCGGGCGCCCGCGACCGCACCCTCGACGAGCTGCTCGTTGTCCTCGGCGCGCCGTCGCG
GGACTTCCTCGCCGGCGACGTCCGTGCGCTGGCCGAGCAGGCCCTCACGGACCAGTCCAAGACCGGCGGCCCGCGCATCA
GCTTCGCGTGCGGCGTGTGGCATGACCGGACCA----TGCCCATCCGCCCCGCCTACCGCGATGCCGCCG---AATCCTT
CAAGGCCGTCGCCCGCGCCGTCAACTTCCGCCAAAAGGTCAGTGCAACGCTATCTTCCCTTCTCTTCTCCCATGATGACG
GACCTGT-------AAGT-----AATCTGCATACGATATATCGATCAATTAATGTCATTGCCAACGTGCATGCATGCTAT
GCTCCTTGTGCAGCCGGAGGAGGCTACGGAGGAGATCAACGCATGGGTGTCGGCGTCGACGGACGGCCTCATCCCCTCCA
TCCTTAGCCGGGGCGCGCTGTCAGACCTCA------CCGACCTGGTGCTCGCCAACGCCATCTACTTTAAGGGCAAGTGG
GCGAAGCCATTCGCCGGGTATCTCACCCAGCACGACAAGTTCCACCGCCTTGACGGCACCGCCGTCGATGCCCCCTTCAT
GCGCGGTCTCGGCAGCCACAACATCGCCTGCCACGATGGCTTCAAGGTGCTGCAGCTCCGCTACGAGGAAGGGCACGGCC
CCTTGCTGCC-------CCAGCCACCAGCTCTAGCTCCCACGCCTGTGCCGATCTACTCGATGTGCGTCTTCCTCCCCGA
TGCGCGCCGCGGGCTGTGGCGGCTCACCGACAAGATCGCGTGCAACCCCGACTTTCTGCGCAAGCACTTGCCGAGGAACA
GTGTCCTGGTCGGCGACTTCCGGCTACCTAAATTCAAGGTAACCTTCGGCATGACGATGAACGACGTACTCCAGGAAATG
GGGGTCAAGGAGGCGTTCGAGCTGGGGAAGGCCGACCTGTCCAACATG---GTGGAGAACGGC------GGAAGGAG---
GAAGATGGCGCTGGAAAAGGTGATCCACATGGCCGTCATCGAGGTGAACGAGGAAGGCACAGAGGCGGCGGCCGCCAC--
-------TTACATGACGCGCCTTGGATGCACACCGGACTCGCGGCCGCCTGCACC----------GTGTGTGGACTTCGT
GGCTGACCATCCATTTGCCTTCTTCATCGTCGAGGAGGTGTCAGGCGCGATTCTGTTCGCGGGG-CATGTCCTTGATCCC
ACCATCAAGTGATGGAGGGCTTTTTTGATTTAGGGTTTGTAATGCTAAACATACAAAGAGTTACACACAATTACACGTAA
ACTCGAATTCTTTTTTTAACTAACCCTTGATTTTCATAGGGATGGGCCCCTTCTCTCCCTTGATCTCTAATTAAAACCCA
CATGCTTGTAAAACCCGTATAAACCTATGTATGTGTGGCATTACTCGTCCAAGGCTCAGTGGATTGAGACTTGATAATAC
TAGACCTATGAACGATTTTACAAAGCTTTATGTAACTTTCTAACAACTAAACCTTCTCCCCCCTGATTTANNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTGAGACTACGCATGCGTCGGCATGTTTGCAAAAATGCTAGACATATA
GGTTTTTACAGGCTCCTCCCAACTTTCTAAATGTTTGCTGCCCTATTGTTTGTGATTTTTCTTTGTTGGACTTTTTGTAG
GCTCAGTTTCTGTGGTCTTTTGCT--------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------TTCTATATATGGCTTGTCTGTCATTGGCTGAGT
TCTTGTGCGTCTACTTTTCATGTTGCTTTTTCTAACCAACTACTAAGTGTACTGATGCACAGCACGATGGTGCTCCGATT
TTGTCACTAGCGTCACTGATGGTTCATTCCTTCCCTTCGTGTCATCCTGCTTCCTCTTTTCTTTTATCATTTCTT
>chr2A_1
GCCGCGCTCTCGCTGGTAGCCGCGGGCGCCCGCGACCGCACCCTCGACGAGCTGCTCGGTGTCCTCGGCGCGCCCTCCCG
GGACTTCCTCGCCGGCCACGTCCGCGCGCTGGCCGAGCAGGCCCTCGCCGACCAGTCCAAGACCGGCGGCCCGCGCGTCA
GCTTCGCCTGCGGCGTGTGGCATGACCGGACCA----TGCCCATCCGCCCCGCCTACCGCGATGCCGCCG---AGTCCTT
CAAGGCCGTCGCCTGCGCCGTCAACTTCCGCCAAAAGGTCAGTGCAACGCCATCTTCCCTTCTCTTCTCCCATGACGACT
GACTTGT-------AAGTAAGGGAATCTGCATACG----ATCGATGAATTAATGTCATTGCCAACGTGCATG-ATGCTAT
GCTCCTTGTGCAGCCGGAGGAGGCTAGGGAGGAGATCAACGCATGGGTGTCGGCGTCGACGGACGGCCTCATCCCCTCCA
TCCTTAGCCGGGGCGCGCTGTCAGACCTCA------CCGACCTGGTGCTCGCCAACGCCATCTACTTTAAGGGCAAGTGG
GCGAAGCCATTCGCCGGGTATCTCACCCAGCACGACAAGTTCCACCGCCTCGACGGCACCGCCGTCGATGCCGCCTTCAT
GCGCGGTCTCGGCAGCCACAGCATCGCCTGCCACGATGGCTTCAAGGTGCTCCAGCTCCGCTACGAGGAAGGGCACGGCC
CCTTGCTGCC-------CCAGCCGCCGGCTCTAGCTCCCACGCCTGCGCCGATCTACTCGATGTGCGTCTTCCTCCCCGA
TGCGCGCCGCGGGCTGTGGCGGCTCACCGACAAGATCGCGTGCAACCCCGACTTTCTGCGCAAGCACTTGCCGAGGAACA
GCGTCCTGGTCGGCGACTTCCGGCTGCCTAAATTCAAGGTCACCTTCGACATGACGATGAACGACGTTCTCCAGAAGATG
GGTGTCAAGGAGGCGTTCGAGCTGGGAAAGGCAGACCTGTCCGACATG---GTGGAGGACGGC------GGAAGGAG---
GAAGATGGCGCTGGAAAAGGTGATCCACAGGGCCGTCATCGAGGTGAACGAGGAAGGCACAGAGGCGGCGGCCGCCAC--
-------TTGCATGACGCGCCTTGGATGCACACCGGACTCGCGGCCGCCTGCACC----------GTGTGTGGACTTCGT
GGCTGACCATCCATTTGCCTTCTTCATCGTCGAGGAGGTGTCAGGCGCCATTCTGTTCGCGGGG-CACGTCCTTGATCCC
ACCATCAAGTGATGGAGGGCTTTTTTGATTTAGGGTCTGTAATGCTAAACATACAAAGAGTTACACACAATTACACGCAT
ACCCTTTC---------------CCCCTGATTTACAGTGGGGTGGGCCCCTTCACCCCCCACTTCCAAACCTAGCCTTTC
----------------------------GTATGTCTGGCATTACTC----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------ACTGAGACTGCACATGCGTCGGCATGTTTGC------------------
--------------------------------------TGCCGTACCGTTTGTGATTTTTCTT-GTTGGGCTTTTTGTAG
GCTCAGTTTCTGTGGTCTTTTGCTTTCTATATACATCTTTGCTAAGTCTCAGTCGACTTAGACTTCGTTATGTCTTAGTC
GATGTTATATTCCATTGATCTTGCATTGAGATTCGTACAAAAAATTATCTTCAATTTTTCCTTTTTCTTCCCATATACTA
TACCACTTGACTGAGACTTCTCAGTCGACCGAGACCTAGACACACCCTTCTATATATGGCTTGTCCGTCATTGGCTGAGT
TCTTGTGCGTCTACTTTTCATGTTGCTTTTTCTAATCAACTACTAAGCGTACTCATGCACAGCACGATGGTGCTCCGATT
TTGTCACTAGCGTCACTGATGGTTCATTCCTTCCCTTCGTGTCATCCTGCTTCCTCTTTTCTTTTATGATTTCTT
>chr2B_1
GCCGGGCTCTCGCTGGTAGCCGCGGGCGCCCGCGACCGCACCCTGGACGAGCTGCTCGCTGTCCTCGGCGCGCCCTCCCG
GGACTTCCTCGCCGGCCACGTCCGCGCGCTGGCCGAGCAGGCTCTCACCGACCAGTCCAAGACCGGCGGCCCGCGCGTCA
GCTTCGCCTGCGGCGTGTGGCATGACCGGACCA----TGCCCATCCGCCCCGCCTACCGCGATGCCGCCG---AGTCCTT
CAAGGCCGTCGCCCGCGCCGTCAACTTCCGCCAAAAGGTCAGTGCAACGCCATCTTCCCTTCTCTTCTCCCATGA-----
-----------------T-----AATGTGCATACG----ATCGGTCAATTAATGATCTGCAT-------ATG-ATGCTAT
GCTCCTTGTGCAGCCGGAGGAGGCTAGGGAGGAGATCAACGCATGGGTATCGGCGTCGACGGACGGCCTCATCCCCTCCA
TCCTTAGCAGGGGTGCGCTGTCAGACCTCA------CCGACCTGGTGCTCGCCAACGCCATCTACTTCAAGGGCAAGTGG
GCGAAGCCATTCGCCGGGTATCTCACCCAGGACGACAAGTTCCACCGCCTCGACGGCACCGCCGTCGATGCCCCCTTCAT
GTGCGGTCAAGGCAGGCACAACATCGCTTGCCACCATGGCTTCAAGGTGCTCCAGCTCCGCTACGAGGAAGGGCACGGCC
CCTTGCTGCC-------CCAGCAGCCGGCTCTAGCTCCGACGGCGGCGCCGATCTACTCGATGTGCGTCTTCCTCCCGGA
TGCGCGCCGCGGGCTTTGGCGGCTCACCGACAAGATCGCGTGCAACCCCGACTTTCTGCGCAAGCACCTGCCGAGGGACA
CTGTCCTGGTCGGCGACTTCCGGTTGCCTAAATTCAAAGTCACCTTCGACATGACGATGAACGACGTTCTCCAGGAGATG
GGGGTCAAGGAGGCGTTCGAGCTGGGGAAGGCCGACCTGTCCGACATG---GCGGAGGACGGC------GCAAGGAG---
GAAGCTGGCACTAGAGCAGGTGATCCACAGGGCCGTCATCGAGGTGAACGAGGAAGGCACCGAGGCGGCGGCCGCCAC--
-------TTGCATGACGCGCCTTGGGTGCACACCGCACTCGCTGCCGCTTGCACC----------GTGTGTGGACTTCGT
GGCTGACCATCCATTTGCCTTCTTCATCGTCGAGGAGGTGTCAGGCGCGATTCTGTTTGCGGGG-CACGTCCTTGATCCC
ACCATCAAGTGATCGAGGGATTTTTTGATTTAGGGTCTGTAATGCTAA--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------
>chr2A_3
CGGCGC-TCTCCCTGGTGGCCGCTGGTGCCCGCGACCGCACCCTCGACGAGCTGCTCGGTGTCCTCGGTGCGCCGTCGCG
GGACTTCCTCGCCGGCCACGTCCGCGCGCTCGCCAAGCAGGTCCTCGCAGACCGGTCCCGGACAGGCGGCCCGCGCGTCA
GCTTCGCGAGCGGCGTGTGGCATGACCGGACCATGCATGCCCATCCGCCCCGCCTACCGCGATGCCGCCG---AGTCCTT
GAAGGCCGTCGCCCACGCCGTCAACTTCCGCCAAAAGGTCGGTGCAACGCCATCTTCCGTTTTCCC--------ATGACC
GATTTGTACTCTGTAATTCT---GTATA-------------CGGTCGATCAATGCCACTGCCAACGTGGATGCAA-TTCG
TG-----GTGCAGCCGGAGGAGGCGAGGGAGCAGATCAACGCATGGGTGTCGTCGTCGACCAACGGCCTCATCCCCTCCC
TCGTCGACCGGGGCGCGCTGTCCAACCTCA------CCGACCTAGTGCTCGCCAACGCCATCTACTTTAAGGGCAAGTGG
GCGGAGCCATTCGACAAGTATCTCACAAAGAAGGACAAGTTCCACCGCCTCGACGGCACCGCCGTCGATGCTCCATTCAT
GCGCGGTCTCGGCATGCACAGCATCGCCTGCCACGATGGCTTCAAGGTGCTCCAGCTCCGGTACGAGGAAGGGCGCCGCA
CGTTGCAGCC-------ATGGATGCGAG------------CGCCGGCGCCGATTTACTCCATGTGTGTATTCCTTCCCGA
TGCTCGCGACGGGCTGTGGAGACTCATCGACAAGATCGCCTGCAACCCCGACTTTCTGCGCAAGCACCTGCCGAGGAGAA
CCGTGCTGGTCGACGACTTCCGGATGCCTAAATTCAAAGTCACATTCGGCATGACAATGAACGGCGTTCTCCGGGAGATG
GGGGTCAAGGAGGTGTTCGAGCTGGGGAAGGCCGACCTGTCCGACATGATGGCGGAGGACGGC------GCAAGGAG---
GAAGCTGGCACTAGAGCAGGTGATCCACAGGGCCGTCATCGAGGTGAACGAGGAAGGCACTGAGGCTGCGGCGGCCAC--
-------TTACTCGATGTTACCCATGTGCTCAGCGAACCCAGCACCGCCTCCGCC----------GCGTGTGAACTTTGT
TGCTGACCATCCGTTTGCCTTCTTCGTCATCGAGGAGGTGTCAGGGGCGATCCTCTTCGCCGGG-CACGTCCTTGACCCC
ACCATCAAATGAGGA-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------
>chr2B_3
CGGCGC-TCTCGCTGGTGGCCGCGGGTGCTCGCGACCGCACCCTCGACGAGCTGCTCGGTGTCCTCGGCGCACCCTCGCG
GGACTTCCTCGCTGGCTACGTCCGCACGCTCACCGAGCAGGTCCTCGCCGACCGGTCCCGGACCGGCGGCCCACGTATCA
GCTTCGCGTGCGGCGTGTGGCATGACCGTACCATGC----CCCTCCGCCCCGCCTACAGCGACGCCGCCGCCGGGTCGTT
CAAGGCCGTCGCCCGCGCCGTCAACTTCCGCCAAAAGGTCAGTGGAACATCTTCTTCCGTTTTCCC--------ATGACT
GATTTGG-------AATTCT---GTATA-------------TGATCAATCAATGCCATTAAAAACGTGCATGCATGTTCA
TG-----GTGCAGCCGGAGGAGGCAAGGGGGCAGATCAACGCATGGGTGTCGGCGTCGACGAACGGCCTCATCCCCTCCA
TCCTTAGCCGGGGCGCGCTGTCAGACCTCA------CCGATCTGGTGCTCGCCAACGCCATCTACTTCAAGGGCAAGTGG
GCGAAGCCAT-CGACAAGGAACTCACCAAGATCGGCAAGTTCCACCGCCTCGACGGCACCGCCATTGATGCGCCCTTCAT
GCACGGCTTGGGCAGGCACAGCATCGCTTGCCATGACGGCTTCAAGGTGCTGCAGATGCGCTACGAGCAAGGCCACC---
CCTTGCCGCC-------GCAGATGCCGGCTCCGGCGCAGGCGCCAGGGCCGATCTACTCGATGTGCGTCTTCCTACCCGA
CGCGGGCGACGGGCTGTGGCGGCTCACTGACAAGATCGTATGCAACCCCGACTTTCTGCGCAAGCACCTGCCGAGGAACA
AGGTCCTGGTTGGCGACTTCCGGATGCCTAAATTCAAGGTCAGCTTCGGCATGACGATGGACGATGTTCTCCGGGAGATG
GGGGTCAAGAAGGCGTTCGAGCTAGGAAAGGCCGACCTGTCTGACATG---GCGGAAGATGGC------GCAAGGAG---
GAAGCTGGCACTTGAGCAGGTGATCCATAGGGCCGTGATCGAGGTGAACGAGGAAGGCACCGAGGCGGCCGCGGCCAC--
-------TTGCATGGTGCCCGCCACTTGCTCACCGAACCCAGCGCCGCCTCCGCC----------TTGTGTGGACTTCGT
GGCTGACCATCCCTTTGCCTTCTTCGTCATCGAGGAGGTGTCGGGCACGATCCTATTTGCCGGG-CACATCCTTGACCCC
ACCATCAAATGAGGGAGG--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------
>chr2B_3
CGGCGC-TCTCCCTGGTGGCCGCGGGCGCCCGCGACCGCACCCTTGACGAGCTGCTCGGCGTCCTCGGCGCGCCGTCGCG
GGACTTCCTCGCCGGCCACGTCCGCGCGCTCGCCAAGCAGGTCCTCGCAGACCGGTCCCGGACAGGCGGCCCGCGCGTCA
GCTTCGCGAGCGGCGTGTGGCATGACCGTACCATGC----CCATCCGCCCCGACTACCGCGATGCCTCCG---AGTCCT-
-AAGGCCGTCGTCCGCGCCGTCAACTTCCGCCAAAAGGTCAGTGCAACACCATCTTCCGTTTTCCC--------ATGGCC
GATTTGTATTCTGTAATTCT---GTATA-------------CGATCGATCAACGT------CAACGTGCATGCATACCCG
TG-----GTGCAGCCGGAGGAGGCGAGGAAGCAGATCAACTCATGGGTGTCGTCTTCGACCAACGGCCTCATCCCCTCCC
TCGTCGGCCGGGGCGCGCTGTCCAACCTCA------CCGACCTGGTGCTCGCCAACGCCATCTACTTCAAGGGCAAGTGG
GCGAAGCCGTTCGACAAGTATCTCACAAAGAATGACAAGTTCCACCGCCTCGACGGCACCGCCGTCGACGCTCCATTCAT
GCGCGGTCTCGGCATGCACAGCATCGCCTGCCACGATGGCTTCAAGGTGCTCCAGCTCCGCTACGAGGAAGGGCGCCGCA
CGATGTGGT-------------------------------CGCCCGGGCCAATTTACTCCATGTGTGTATTCCTTCCCGA
CGCGTGCGACGGGCTGTGGCGGCTCACCGACAAGATCGTCTGCAACCCTGACTTTCTGCGCCAGCATCTGCCGAGGAGCA
CCGTCCTGGTCGACGACTTCCGGATGCCTAAATTCAAGGTCACCTTCGGCATGACAATGAACAACGTTCTCCAGGAGATG
GGGGTCAAGGAGGTGTTTGAGCTGGGGAAGGCCGACCTGTCCGACATG---GCGGAGGACGGT------GCAAGGAG---
GAAGCTGGCACTGGAGCAGGTGATCCACAGGGCTGTCATCGAGGTGAACGAGGAAGGCACGGAGGCCGCGGCGGCCAC--
-------TTACTCGATGGCACCCATGTGCTCACCGAACCCAGCACCGCCTCCGCC----------GCGTGTGGACTTTGT
TGCTGACCATCCGTTTACCTTCTTCGTCGTCGAGGAGGTGTCCGGCGCGATCCTGTTCGCTGGG-CACGTCCTTGACCCC
ACCATCAAGTGATG------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------
>chr4B_13
------------CTGGTGGCCGCCGGCGCCCGCGAGGGCACCCTCGACGAGCTGCTCCGCGTCCTTGGCGCGCCTTCCCG
GGACTTCCTCGCCGGCCACGTCCGCGCGCTGGGAGAGCATGCCCTCGCCGACGGGTCCCGGACGGGCGGCCCGCGCGTCA
GCTTGGCCTGCAGCGTGTGGCACGACGTGACGATGC----CCCTCCGCCCCGCCTACCGCGCCACCGCCGCCGAGTCGTA
CAAGGCCGTCGCCCGCGCCGTCAACTTCCGCCAAAAGGTTAGTGTACATCGGCCGTCA------CC--------GTGATC
GATCTGTGGCATGGCATGCACTAGTATA-------------CGAT-------TGTCATTATGTACGTCGATC-GTGGTAC
-------GTGCAGCCGGAGGAGGCAAGGGAGCAGATCAACGCATGGGTGGCGGCTGCGACGAACGACCTCATCCCCTCCA
TCCTCAGCCCCGACGCGCTGTCCAGCCTCA------CCGTCCTGGTGCTCGCTAACGCCATCTACTTCAAGGGCATGTGG
GAGAAGCCGTTCGACAAGGAGCTCACCAAGGACGACAAGTTCCACTGCCTCGACGGCACCGCCGTGGACGCGCCCTTCGT
GCGCGGCTTGGGCTGGCACGACATCGCCTGCCACGACGGCTTCAAGGTGCTCCAGCTCCGCTACGTGCAAGGTCACT---
CCTCGCAGGGCCAGCCGCA----------------------GCCGCCGCCGATCTACTCGATGTGTGTCTTCCTCCCCGA
CGCACGCGACGGGCTGTGGGAGCTCACCGACAAGATCGCCAGCAACCCCGACTTTGTGCGCAAGCACCTGCCGTGTGGCG
ACGTCATGGTCAGCGATTTCCGGCTGCCTAAATTCAAGGTCAACTTCGGCATGACAATGGAGGGCATTCTCCAGGACATG
GGCCTCAACGAGGCATTCGAGCCGGGGAAGGCCGACTTGTCCGACATG---GCGGAAGACGGC------GCAG---G---
GAAGCTGGCGCTGGAGAAAATAATCCACAGGGCCGTCATCGAGGTGAACGAGGAAGGCACCGAGGCCGCGGCTGCCACCG
TTGAGACTATGACGTTATGTTCTTGGGAAACTAGTGAC------------GCGCC----------GCATGTGGACTTCGT
GGCTGACCATCCCTTTGGATTCTTCGTCATCGAGGAGGTGTCCGGTGCTACCCTGTTCGCAGGG-CACGTCCTTGATCCC
ACTACCAACTGATCGAGGG-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------
>chr2D_389
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------GTGCAGCCGGAGGAGGCAAAGGAGCAGATCAATGCATGGGTGGCGGCGTTGACGAACGACCTCATCCCCACCC
TGATTGGCCGTGACGCGTTGTCCCACCTCA------CCGACCTGGTGCTCGCCAACGCCATCTACTTCAAGGCCAAGTGG
AACAAGCCATTCGACGAGGAACGCCATCT---------GTTTCACCGCCTTGACAACACCGCCATCGACACGCCCTTCAT
GCGTGGCTTCGGTAGGCAAAGAATCGCGTGGCACAATGGCTTCAAGGTGCTCCAGCTGCGCTACGAGCAAGGCCGCC---
CCTTGCCCGCGCAGTCGCA----------------------GCCACAGCCGATCTACTCAATGTGTGTCTTCCTCCCCGA
CGCGCGTGATGGGCTGTGTTGGTTGGCCAACCAGATCGCTTGCGACCCTGACTTTTTGTGCAAGCACCTGCCGAGGAGCG
ACGTCGAGGTCGACGACTTCCGGCTGCCTACATTCAAGGTCAGCTTTGACATGACTATGAACGACATTCTCCGCGACATG
GGGCTCAAGGAGGCTTTAGAGCCGGGGAAGGCCGACCTGTCTGATGTG---GCCGAGGACGGGACGGGGGAAAGGAG---
GAGGCTGGCCCTACAGGAAGTGATCCACCGAGCCATCATCGAGGTGAACAAGGAAGGCACCGAGGCCGCGGCTGCCAC--
-------TGTGATGATTACGTGTAGCACGACTAGTGCCCTACCTCCGATGTCGCG----------GCGTGTGGCCTTTGT
TGCTGACCATCCTTTTGCTTTCTTTGTCATCGAGGAGGTGTCGGGTGCGATCATGTTCG-CGGG-CACGTTGTTGACCCC
ACTATCAATTGAGGGGG---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------
>chr4D_389
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------GTGCAGCCGGAGGAGGCAAGGGAGCAGATCAACGCATGGGTGGCGGCTGCGACGAACGACCTCATCCCCTCCA
TCCTCAGCCCCGACGCGCTGTCCAGCCGCA------CCGTCCTGGTGCTCGCTAACGCCATCTACTTCAAGGGCATGTGG
GCGAAGCCGTTCGACAAGGAGCTCACCAAGGACGACAAGTTCCACCGCCTCGACGGCACCGCCGTGGACGCGCCCTTCGT
GCGCGGCTTGGGCTGGCACGACATCGCCTGCCACGACGGCTTCAAGGTGCTCCAGCTCCGCTACGTGCAAGGCCACT---
CCTCGCAGGGCCA-------------------------------GCCGCCGATCTACTCGATGTGTGTCTTCCTCCCCGA
CGCACGCGACGGGCTGTGGGAGCTCACCGACAAGATCGCCTGCAACCCCGACTTTGTGCGCAAGCACCTGCCGTGTGGCG
ATGTCATGGTCAGCGATTTCCGGCTGCCTAAATTCAAGGTCAACTTTGGCATGAAAATGGAGGGCATTCTCCAGGACATG
GGCCTCAACGAGGCGTTCGAGCCGGGGAAGGCCGACTTGTCCGACATG---GCGGAAGACGGC------GCA---AG---
GAAGCTGGCGCTGGAGAAAGTAATCCACAGGGCCGTCATCGAGGTGAACGAGGAAGGCACCGAGGCCGCGGCTGCCACCG
TTGAGACTGTGACGTTATGTTCTTGGAAAACTAGTGA------------TGCGCC----------GCATGTGGACTTCGT
GGCTGACCATCCGTTTGGCTTCTTCGTCATCGAGGAGGTGTCCGGTGCTACCCTGTTCGCGGGG-CACGTCCTTGACCCC
ACGACCAACTGATGGAGGG-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------
>chr6A_389
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------GTGCAGCCGGTGGAAGCAGCGAAGCAGATCAACGCATGGGTGGCGGCGTCCACGAATAACCTCATCCCCTCGA
TCATCAATCCACGCGCACTATCCGAGCTGACCGACGCCGACCTCGTGGTCGCCAACGCCATCTACCTCAAGGGCGAGTGG
CTCAAGCCTTTCCGCAAGGAGCAGACCAAGGAGGACAAGATCCACCGCCTCGACGGCGGCATTGTCGACGTGCCCTTCAT
GCGTGACCACGGCAGGCAGCGCATTGCGTGCCATGACGGGTTCAAGGTGCTCCAGCTTTACTACGAG--AGGGGTCAGCC
GTTGGCTGCT-------CA----------------------GCCATCGGCGCTCTACTCAATGTGCATCTTCCTCCCACA
CGACCACGACGGGCTGTGGCGGCTCACCAACAAGATCGCATGCAACAATGGCTTTTTGTGCGAGCACCTGCCGACGGGCA
CCGTCCTAGACGGCGACTTCCGCTTGCCCAAGTTCAAGCTCGCGTTCTCCACCGACATGACAAACGTTCTCCAGGACTTG
GGACTCAAGGACGCTTTCGACCTGTGGAAGGCCGACCTGTCCAACATG---GTGGAGGAGAGC------CCTG---GCGT
GAACCTTGCGCTGGAGAAAGTGCTACACAAGGCTGTCATCGAGGTAAACGAGGAAGGCACAGAGGCGGCCGCCGTCACCG
CTGCTGGTCTTTGCAGAAGTACA------------------CGGCCGGGCCTACAAACCGCCGGTGCGCGTGGACTTTGT
GGCTGATCACCCGTTTGCCTTCTTCGTGATGGAGGAGGTGTCGGGTGCAATTCTTTTCA-CAGGACACGTCCTTGATC--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------
>SNPs
----------------------------------------------------------S---------------------
----------------S-------S-----------------------S-------------------------------
--------------------------------------------------------------------------S-----
--------------------------------------------------S----------------------------S
-----------------------------------SSSS-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------S----------------------S---------------------------------
--------------------------------------------------------------------------------
-------------------------S--------------S--------------------------S--------S---
---------------------------------------------------------S----------------------
-----------------------------S--------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------S------------
------------------------------------S----------------------------------------S-S
--S-SSSSSSSSSSSSSSSSSSS---S------S--SS---S-----------S-S---SSSS--SSS-SS--SSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSS------S-----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------S-S-------------------SSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----S--SS----------------S-----S----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------S--------------
-----------------------------------S-----------S-----S--------------------------
-------------------------------------------------------------------S-------
>forward_291
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------CAAAAGGTCAGTGCAACGCT-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------
>reverse_2008
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------ACAGGCTCCTCCCAACTTTC-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------
