>input_sequence_86488
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------ATGAAGGAGTGGTGGGCAAGCACCTGC
GCCGATGGCACGCCGAACCGCCAAGCCAAGGCCTCCCTCATCATGCTCGTCTCATGGATAATTTGGAACGAGCGTAATGC
AAGAGTGTTCAAATATAAGAGTGCTCCACCGCCAATCTTGCTCTCCTCCATCGCCACCGAGGCCAACCTTTGGGTCGTCG
CCGGTGCAAAGAAGTTAGGGTCTTTTATTTCACGCGAGTAA---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------
>chr2B_1_TraesCS2B01G520000
CTTTTCGCCCCAGCCGGGCTAGAGGATATGCAGAAACCAAATGAAGTGTAAAATGTCGGTTTTTAGTCAGTTTTTGCTTA
CATGTCTGATTTTAGTTTGTTTTTACTCAACCAGGCTCAACTGAGACGTACATGCAATGCATGCAAAATCGCTGCGAGCA
ACCAACCACACATATTAGTTCTTACTCCAAAGTTCTTCCCATTGCCCAACTAAA--AAAAGTTCATCCCATCGTGGCTAC
AGTACACACGAGGATATTCTTTTTCT-GAATGAAAAGTGTGTAGCTAGGGATCTTGTGCCGTGATTGATTCGTGGAAAAG
TATGGGTACGTCCGTGGACTGTAGCATCGAACGAACCGAGCGGGCGGGCGGGCGCGCGAGTACACCTTTTCCGGTACCGA
TGCATGCGCGCGCGCCTACGTACGGTGTCGTTCACTGTAGCGCACGAGAGTGAGCCAC---CACTACGGTTTCTGTGCAT
GTATTTATTCCTTTTTTTTGAACGGGTGCATGCATTCATTGATCGTGGCAGAAACGAAAATC---------------AAC
GCCTCCTATGTCGTCCTTGATTAATTTA----------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------GTT
ATTTTTTAAGATCCAAAATAGTACA-------------------------------------------------------
--------------------------------------------------------------------------------
--------CTCT--ATATTCTTTCTCGATTCAGCACGTACTCTACGTACTAATTGTGTACTC-TTTTTCCGTGCTCGTTC
ATCGTTTTGGTGAGACCTCA------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------AAGCAGGCGGTGCCATCACATGCATGGTTC
TTTTCTGCTTCCGACGAAACACACCATCACACGTAGT----ACAACCTTTAACACGGACCGATTCCCCACTGGTACTGCG
C--CGCAGCATGTCGATTCGTTCGTCAACATGGATGATTCAAGTTCTGATCGACACCCAAGATCAATTTTTTTG-ATTAA
AAGACAGGGAAAACATCGTGAAATTGTGATAATCTTCTACAAGTGTCGCTACACCCGGCGTCTTTGGTCTTCGGTCATTG
AGAAATTCCTCTTGCACGGGCTTGACACTTTCGCTTGGCCCTTGTTCGACTCGATGAAGGAGTGGTGGGCAAGCACCTGC
GCCGATGGCACGCCGAACCGCCAAGCCAAGGCCTCCCTCATCATGCTCGTCTCATGGATAATTTGGAACGAGCGTAATGC
AAGAGTGTTCAAATATAAGAGTGCTCCACCGCCAATCTTGCTCTCCTCCATCGCCACCGAGGCCAACCTTTGGGTCGTCG
CCGGTGCAAAGAAGTTAGGGTCTTTTATTTCACGCGAGTAATCCGCATGCCGTGTTTTGGGTGTCTTGTAACAAACTCTT
TTCTATCTTAATTAATGGATGAGGCAAAGCTTTTGCCTCCGTTTCAAAAAAAAAAGAAAGAAATTGACCATATTTTTGTA
GAAATATATCGATATCCATAATATCAAATCGGATTC-TTAGATTCATCATGCAATGAATTTTCATATTTTTATTACTATT
TAGTATTATGGATGTCAATATTTTTGCCTCTGAACTTGGTC-AAAGTT--GAA--A--AAGTTAATTTTTTTAATAAGTT
AATACACCTTGTATTTTAGAACGGAGTGGGTATTAGGTTTGGTTAG--GGGAAGGCGATGGTGTGTGTTTTGTTTTTTAT
TCATATAATGC-GTTGTTCTGGTGGGATTTCGC-GATGTGATTTTGTGTTGTCTGCTAATCAACTTATACTTATATG--G
-AAAATTTATGTGTC-GGTGGCTGCATGTACTATATTGGTGTTATAGTATCACATGCTGACA----CTATTTTTTCAGAT
AAT-------------GTTTGATATGTT-T-----TTATAGGCCGGTTT-CTTTCAACTGATTTAAAAAAATATTGACCC
AATCAAAATCATGAACCAAATCCAATATTTAATTTCTCAATGGAATAGGAGTGCTCTA----AAATAAGAGAGCATGGTG
AATTAGAATAATTGAGTGAGAG-------------ATTGTTGACCCGGTTA-----------------------------
------------------------------------------------------------------AAATCGA-TGACCC
AATTCCAAATTGGTGACCTTAATTCGACGAGAGGCCTTCAATTCTAGGGAGCTTAGTGATAATATATTTTATGTTGTTGG
GGGTGTATTGTAAGTATGTGTGTGTGCGCGCGAGCAAAATGGCATGCTTACACCCATCACCCATGGAGGGTTGGGGTGGC
CTATGCATGCGGCAAAAGTATATATCTGATACTAGCAATTGGAAAATAGAATTGAAACTATATGTACTTGAATTGTATAC
ATTTTCTTATCTTTATATTTACCTTTGCCCTACTAGTAGCGCACAAGAAAGCACTAGCGAAAGCATATGCGCCG
>chr2D_179
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------TTCTAACTCCAAAGTTCATCCCATTGTTCAACTAAAAGAAAAGTTCATCCCATCGTGGCTAC
AGTACG---GAGGATATTCTTTTTTCCGAATGAAAAACGTGTAGGTAGGGATCTTGTACCGTGATTGATTCGTGGAAAAG
TATGAGTACGTCCGTGGCCTGTAGCATCGAACGAACCGAGCGGGCGGGCGGGCG----AGTACACCTTTTCCGGTACCGA
TGCATGCGCGCGCGCCTACGTACGGTGTCGTTCACTGTAGCGCACGAGAGTGAGCCACCACCACTACGGTTTCTGTGCAT
G-------------------------------CATTCATTGATCGTGGCAGAGACGAAAATTAACGCCTGCTATGTTAAC
GCCTGCTATGTCGTCTTTGATTAC--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---TACTCCTACTCATATTCGTTCTCGATTCAGCACGTAC-----GTACTAATTGCGTGCTC-TTTTTCCGTGCTCGTTC
ATCGTTTTGGTGAGACCTCA------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------AACCAGGCTGTGCCATCACATGCATGGATC
GTTTCTGCTTCCGACGAAACACACCATCACACGTACCGATCCCCA---------------------CCACTAGTAC----
------------------TGTTCGTCAACATGGATGATTCAAGTTCTGATCGACACCCGAGATCAATTTTTTATTATTAA
AAGACAGGGAAATCATCTTGAAATTGTGATCATCT---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------
>chr2A_221
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------TCATGCCATCGTGGCTAC
AGTACGCGAGAGGATATTCTTTTTTT-GAATGAAAAGCGTGTAGCTAGGGATCTTGTGCCGTGATTGATTCGTGGAAAAG
TAGGAGTACGTCCGTGGCCTGTAGCATCGAACGAACCGAGCGGGCGGGCGGGCGCGCGAGTACACCTTTTCCGGTACCGA
TGCATGCGCGCGCGCCTACGTACGGTGTCGTTCACTGTAGCGCACGAGAGTGAGCCACCACCACTACGGTTTCTGTGCAT
G-------------------------------CATTCATTCATCGTGGCAGAAACCAAAA---------------TTAAC
GCCTGCTATTTCGTCTTTGATTTACTATGGGGTGTTTGTTTGCAGAGACTTTTTTGTGTATGAACTAGAAAAAGTCTCTT
TTAAAGAGTTTTTTATCAAACGGGAGGAACTTTTTAGGGATTAAATTAAATATTTGGGACTAAATGAAGAAGACTCTTAA
GGAGAGTCTTTTTGGACTTTTCCAACAATCCTCCTCCGTGCACCCATTGGCCCGCCACCCCATGGTGTTGTTTGATTGTT
ATTTTTCTATATATTAGAGGCAACATGATCATTTAATAACCTCTAGGAAGTGACTAGAGACTTTTTAGTCTCTCAAAAAA
ATAGAGAGGGACTTTTTAGGGACTAAAGACTTTTTAGTTGGGACTATAAAAAGTCCCAGGACTAGAGAATCAAACACCAC
CTATACTCCTCT--ATATTCGTTCTCGATTCAGCACATAC-----GTACTAATTGCGTGCTCTTTTTTCCGTGCTCGTTC
ATCGATTTGGTGAGACCTCAGGCTGGTTGTAATGTGGAGTATCATATAGTAGATCGTGTATATGATACTAGTGTATGATA
CTACCTCCCTAATGCATAGTATCATATATTAGTATCATATAATACTCTATTTATTATCATGCATGACACAAAATAGCATA
GTATTTATTATGATACGGTAGTATGATATTTTATCATCTCTTTCTTCATTTAATGCTATGACATCTCATTAAAATTGCCT
AGTTGGCGTGCATGATATTAGCTATGATACTACCATTACGACCAGCCCCAAAGCAGTCGGTGCCATCACATGCATGGATC
TTTTCTGCTTCCGACGAAACACATCATCGCGCGTAGTATGTACAACCTTTAACACGGACCGATTCCCCGCTGGTACTGCG
CCGCGCAGCATGTCGATTTGTTCGTCAGCATGGATGATTCAAGTTCTGATCGAGACCCAGGATCAATTT-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------
>chr2D_1328
AAATTT--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------AACCACATTTTTATA
GAAATATATTAATATCCATAATATCAAATCAGATTC-TTAGATTCATCAC-----GAATTTTCATATTTGTATTATTATT
TAGTATTGTGGATGTCAATATTTTTGCCTCTGAACTTGGTC-AAAGTT--AAA--A--AAGTTGGC-TTTTCAATAAACT
AATGCACCTTATATTTTAGAACAGAGTGAGTATTAGGTTTGGTTAGTGGGAAAGATGATGGAGTGTGTTTTCTTTTT-AT
TCATATAATGC-GGTGTTCTGGTGGG-ATTTGGCGGTGTGATTTTGTGTTGTCTTCCAATCAACTTATACTTACGTG-GA
-AAAATTTCTCCGTC-AGTGGCTGCATACACCATATTGGTGCTATAGTATCACATGTTGACG----CTATTTTTTAGGTG
ATGAGATGGTGCCTAGGTTTGATATGTT-T-----T-ATAGGCTGGTTG-CTTCTATTTGATTTGAAAAATTGTTGA-CC
AATCAAAATCTTGAACCAAATTCAATATTTAATTTCTCAATGGAATAGGAGAGCTCTA----AAATAAGAGAGCATAGTG
AATTAAAATAACCGAGTGAGAG-------------ATTGTTGACCCGGTCA-----------------------------
------------------------------------------------------------------AAATCTG-TGACTC
AATTCCAAATTGGTGACCTCAATTGAATGAGAGGCCTCCAATTCTAGGGAGCCGAGTGATATAGTATATT----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------
>chr5D_1328
AAATTT--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------GATCACA-TTTTATA
GAAATATATCAATATCCATATTATTAAATCGGATTC-CTAGATTCATCATGAAATGAATTTTCATATTGTTATTATTATT
TAGTATTGTGGATGTTGGTATTTTTGTCTCTGAACTTGGTC-AAAGTT--TAA--A--AAGTTAAC-TTTTCAATAAAAT
AATACACATTATATTCTAGAACGGAGTGAGTATTAGGTTTGGTTAGTGGGGAAGATGATGGAGTGTGTTTTCTTTTTTAT
TCATATAATGGGGGTGTTCTGGTGGG-CTTTCATGGTGTGATTTTTTGTTGTCTACTAATCAACTCGTACTTATGTGAGA
-AAAATTTCTGTGTT-GGTGACTGCATGCACTATATTGGTGCTATAGTATTACATGTTGAAG----CTATTTTTTAGGTG
ATGCGAGGGTGCCTAGGATTGATATGTT-T-----TTATAGGTCGGTTG-CTTCCAATTGATTTGAAAAATTGTTGAT-C
AGTCAAAATCATGAACCAAATCCAATATTTAATTTTTATATGGAATAGTAGAGCTCTA----AAATAAAAGAGCATAGTG
AATTAAAATAATTGAGTGAGAG-------------ATTTTTGACCTGGTCA-----------------------------
------------------------------------------------------------------AAATCGA-TGACCC
AATTCCAAATTGGTGTCCTCAATTGAATGAGAGGCCTCCGATTCTAGCGAGCTTAGTGATATAGTATATT----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------
>chr7B_1328
AAATTT--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------GACCACATTTGTGTA
GAAATATATCAATATCCATAATATCAAATCTGGGTT-TTAGATTCATCATGAAATGAATTTTCATATTTTATTTA---TC
TAATGTTGTGGACGTCGATCGTTTTGGCTCTGAACTTGGTGTAAATTA--AAG--A--AATTTGAC-TTTTCAATAAACT
AATACACCTTATATTTTGGAACGAAGTGAGTATTTGATTTGGTTAGTGGGGAAGATGATGGAGTGTGTTTTCTTTTTTAT
TCATATAACGC-GATGTTTTGGTAGGCCTTTCGTGGTGTGATTTTGTGTTGTCTGCTAATCAACTCATACTTATGTG-GG
-GAAATTTTTCATGGTGGTGGTTGCATGTACTATATTGGTGCTAAAGTATCAGATGTTTAGTTTTTCTTTTTTCTAGGTG
ATGAGAGGGCACGCGGGGTTGATATGTT-T-----CTATAGGCCGGCTG-CTTTCGTTTGATTTG-AAAATTATTGACCT
AGTCAAAATCATGAATCAAATCCAAT--TGAATTTCTCAATGCAATGGGAGAGCTCCA----AAGTTAGAGAGCATAGTG
AATTAAAAGAATTGTGTGAGAG-------------ATTGTTGACCTAGTCA-----------------------------
------------------------------------------------------------------AAATCGA-TGACCC
AATTCCGAATTGGTGACCTCAATTAAATGAGAGTCCTTCATTCCTAGGGAGCTTAGTGATATAGTATATT----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------
>chr7B_1328
AAATTT--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------GACCACATTTGTGTA
GAAATATATCAATATCCATAATATCAAATCTGGGTT-TTAGATTCATCATGAAATGAATTTTCATATTTTATTTA---TC
TAATGTTGTGGATGTCGATCGTTTTGGCTCTGAACTTGGTGTAAATTA--AAG--A--AATTTGAC-TTTTCAATAAACT
AATACACCTTATATTTTGGAACGAAGTGAGTATTTGATTTGGTTAGTGGGGAAGATGATGGAGTGTGTTTTCTTTTTTAT
TCATATAACGC-GATGTTTTGGTAGGCCTTTCGTGGTGTGATTTTGTGTTGTCTGCTAATCAACTCATACTTATGTG-GG
-GAAATTTTCCACGGTGGTGGTTGCATGTACTATATTGGTGCTAAAGTATCAGATGTTTAGTTTTTCTTTTTTCTAGGTG
ATGAGAGGGCACGCGGGGTTGATATGTT-T-----CTATAGGCCGGCTG-CTTTCGATTGATTTG-AAAATTATTGACCT
AGTCAAAATCATGAATCAAATCCAAT--TGAATTTCTCAATGCAATGAGAGAGCTCCA----AAGTTAG------TAGTG
AATTAAAAGAATTGTGTGAGAG-------------ATTGTTGACCTGGTCA-----------------------------
------------------------------------------------------------------AAATCGA-TGACCC
AATTCCGAATTGGTGACCTCAATTAAATGAGAGTCCTTCATTCCTAGGAAGCTTAGTGATATAGTATATT----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------
>chr1D_1328
AAATTT--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------GACCATATTTTTGTA
GAAATATATCAATATCCGTAATATCAAATAGGATTC-TTAGATTCATCATGAAATAAATTTTCATATTTTTAATATTGTT
TAGTATTGTGGATGTCGATAATTTTGCCTCTGAACTTGGTC-AAAGTT---AA--A--CAGTTGAC-TTTTCAATAAACT
AATACACCTTATAGTTAGGAACGGAGTGAGTATTAGATTTGGTTAGTGGGGAAAATGATAGAGTGTGTTTTCTTTTTTAT
T------------GTGTTCTGGTGGG-CTTTTT-GGGGTGATTTTGTGTTGTGTGCTAATCAACTCATACTAATGTG-GA
-AAAATTACTTCGTC-GATGGCTGCATGTACTATATTGGTGCTACAGTAGCACATGTTGACG----TTATTTTTTAGGTG
ATGATAGGGTGCCTAGGTTTGATATGTT-T------TATAGGCCGGTTG-CTTCCAATTGATTTGAAAAATTGTTGACCC
AATCAAAATCATGAATCAAATCCAATATTTAATTTCTCAATGGAATATGAGAGCTCTA----AAATAAGAGAGAATGATG
AATTAAAATAATTGAGTGAGAG-------------ATTGTTGACCCAGTCAAAATCGATGACCTTAATCGAATAAGAGGC
CTCCAATTCTAGGGAGCTTAGTGATATCGTATAAAATAATTGAGTGAGAGATTGTTGACCCGGACAAAATCGG-TGACCC
AATTTCAAATTGGTGACCTCAATAGAATAAGAG-CCTCCAATTATAGGGAGCTTAGTGATA-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------
>chr7A_1328
AAATTT--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------GACCACATTTTTGTA
GAAATATATCAATATCCATAATATCAAATC-GGATTCTTAGATACACCACAAAATGAATTTTCATATTTTTATTACTATT
TAGTATTGTGGATGTCGATATTTTTGCCTCTACACTTGGTC-AATATTTCAAA--A--AAGTTGGC-TTTTCAATAAACT
AATACACCTTATATTGTAGAACAGAGTGAGTATTAAGTTTGGTTAGTGGGGAAGATGATGGACTGTCTTTTCTCTTTTAT
TCATATAATGT-AGTGTTCTGGCGGGCTTTCGC-GGTTTGATTTTGTGTTGTCTGCTAATCAACTCATACTTATGTT-GG
-TAAATTTCTACATC-GGTGGCTGCATATACTATGTTGCTTCTATAGTTTAACATGTTGATG----C-TTTTTTTAGGTG
ATGAGAGGGTGCCTAGGATTGATATGTT-T-----TTATAGGCTGGTTG-CTTCCAATTGATTTGAAAAATTGTTGATCC
AGTCAAAATCATGAACTAAATCCAATATTTAATTTCAAAATGGATTA---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------
>chr1D_1331
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------TTGACCACAATTGTGTT
GAAATATATCACTATCCATAATGTCAAATC-GGATT-TTAGATTCATCATGCAATGAATTTTCATATTTCATTTA---TT
TAGTAG-GTGTATGTCGATATTTTTGGCTCCGAACTTGGTC-AAAGTT---AA--AAGAATTTGAC--TTTTAATAACCT
AATACATCTTATATTTTGGAACAGAGGGAGTATTTGATTTGGTTAGTGGGGAAGATGATGGAGTGTGTGTTCTTTT--AT
TCATATAATGC-GGTGTTTTGATGGGCCTTTTGTGGTGTGATTTTGTCTTGTCAGTTAATCAACTCAGACTTATGTG-GA
GAAATTTTCTGCGTT-GATGGCAGCATATACTATATTGGTGCTAAAGTATCACATGTTGGCG---CTTCTTTTGTCTAAG
TGATGCGGGTGCACGGGATTGATATGGT-T-----TTATAGGCCAGTTTGCTTTTGATTGATTTAAAAAATTGTTGACCC
AGTCAAAATCATGACCCAAATTCAATACTGAACTTCGGATTTGAATGTGAGAGCTCCAAAATAAATAAAAGAGCATTCTC
AATTAAAAGAATTGAGTGAGAG-------------ATTATTGACTCGGTCA-----------------------------
------------------------------------------------------------------AAATCGG-TGACCC
AATTCTAAATTGGTGACCCCAATTGAATGAGAGGCCTCCAACCCTAGGGAGCTTAGTGATA-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------
>chr4A_1331
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------TTGACCACATTTGTGTA
GAAATATATGAATATCCATAATATCAAATCTT-TTT-TTAGATTCATCATGAAATGAATTTTCATATTTTATTTA---TC
TAATATTGTGGATGTCGATTTTTTTGGTTCTGAACTTGGTC-AAAATT---AA--AGAAATTTGTC-TTTTCAATAAGTT
AATACAACTTATATTTTAGAATGAAGTGAGTATTTGGATTGGTTAATGGGGAGGATGATAGTGT--------TTTTTTAT
TCATATAAAGT-GATGTTTTGGCAGGTTTTTCGTGATGTGATTTTGTGTTGTCTGCTAATCAACTCATACTTATGTT-GG
-AAAAATTTCTGCGATGGT-GCTGCATGTACTATATTGGTGCGG-AGTATCAAATTTTGAGTCTTCTTTTTTTCTAGATG
ATGAGAGGGTGTGTGTGGTTGATATGTT-T-----TTATCGGCCTGCTG-TTTTCGATTGATTCGAAAAATTATTGATCC
AGTCAAAATCATGAACCAAATCCAAT--TGAATATCTCAATGCAATGAGAGAGCTCCA----AAATTAGAGAGCATAGTG
AATTAAAAGAATTGAGTGAGAG-------------ATTGTTGACCCGATCA-----------------------------
------------------------------------------------------------------AAATTGG-CGACAC
AATTCCAAATTGATGACCTCAATTGAATGAGAGGCCTCCATTCCTAGGGAGCTTAGTGGTATAGTATAT-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------
>chr4A_1331
TTGATCAA------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------ATTTGTAAA
GAATTATATCAAAATCCATAATATCAAATCA------TTAGATTCGTCATGAAATGAATTTTTATATTTTATTTA---TT
TAGTATTGTGGATGTCGATATTTTTGCCTCTGAACTTGGTC-AAAGTT---AACAA--AAATTTAC-TTTTCAAAAAACT
AATACACCTTATATTTTGGAACCGAGAGAATATTTAGTTTGGCGAGTGGAGGAGATGATGAAGTGTGTTTTATTTTT-AT
TTATATAATCC-G-TTTTTTGGTGGCTCTTTCGTAGCGAGATTCTATGTTATCTGCTAATCAACTCATATTTATGTG-TG
-AAAATTTATGTGTC-GGTGTCTGCATCTATTATATTGGTGTTATAGTATCACATGATGGCA---CTTTTTTTATAGGTG
ATGATAGGGTGCGCGGGATTGATATGTTCT-----CTATAGGCCGGTTG-CTCCTAATTGAACTGAAAAATCATAGGCCC
GCTCAAAATCCTGAACCTAATCCAAAATTTAATACCTCAATCGAGTGGAAGGGCTCCC----AAATTAGGGAGCATGGTG
AATTAAAAGAACTGAATGAGAGAGTTCCTTGAGAAATTGTTGACCCGATGA-----------------------------
------------------------------------------------------------------AAATCGAATGACCC
AATTCTAAATTG--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------
>chr6B_1331
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------TTGACCACATTTGTGTA
GAAATATATCGATATCCATAATATCCAATCTGGTTT-TTAGATTCATCATGATTTTTTTTTTCATATTTTATTTA---TC
TAATATTGTGGATGTCAATATTTTTTGCTCTGAACTTGGTC-AAAGTT---AACGA--AAGTTGAC-TTTTCAATAAACT
AATACACCTTATATGTCGGGACGAAGTGAGTATTTGG-TTTGTTGGTGGGGAAGATGATGGAGTGTGTTTTCTTTTTTAT
TCATATAACAG-AGTGTTTTGGTAAGCCTTCCACGGTGTGATTTTGTGTTGTCTGCTAATCAACTCATACTTATGTG-CG
-AATTTTTTTGGCGGTGGTGCCTACATGTACTATATTGGTGCTAAAGTATCACATGTTGATCTTTCC-TTTTTCTAGGTA
ATGAGAGGGTGGGTTGGGTTGATATGTTAAAAAAATAATAGGTCGGCTG-CTTCTGATTGATTTGAAAAATTGTTAACCC
AGTCAAAATCATGAATCAAATCCAAT--TGAATTTCTCAATGCAATGAGAGAGCTCCA----AAATTAGAGAGCGTCGTG
AATCAAAAGAATTGAGTGAGAG-------------ATCGTTGACCCGGTGA-----------------------------
------------------------------------------------------------------AAATCGA-CGATTC
AATTCCAAATTGATGATCTCAATTGAATGAGAGGCCTCCATTCCTAGGGAGCTTAGCGATATAGTATAT-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------
>SNPs
S-S---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSS----S------------S--------SS----------------------------------
-----S-SS---------------S------------S------------------------------------------
----S------------S--------------------------------------------------------------
--------------------------------------------------------------------------------
-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------------S------------------
----S----------S--------S-SS----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------SS-S--SSS-S-SSSS----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------S-------------------SSSSS----------S--S---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------S--
--------------------------------------------------------------------------------
------------------S-----------------------------------------------------SS------
------------S----S------------S----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------
--------------------------------------------------------------------------------
-------S------------------------------------------S--------------SS-------------
----------S-----------------S-------------------------SS---------------S--------
-------------S------------S-----------------------------------------------S-----
--------------------------------------------------------S-------------------S--S
-SS------------------------------------------------------S------------S---------
---------------------------------------------------S----------------------------
-----S-------------------------------------------S------------------------------
--------------------------------------------------------------------------------
-------------------S----SS-S---------------------------------SSS---S--SSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_338
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------AG
TATGGGTACGTCCGTGGA--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------
>reverse_3014
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------CTAGCGAAAGCATATGCGCC-
