>input_sequence_86484
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----------------------------------------------------------ATGGCAAAGTGTCTCGCCGTCG
CGCTCCTGCTACTGGTGGTGCTCGCGTCCTGCGAAGGGAGGGAGCTGAATGAGAAGG---------TTGCAGCGACGCGT
GTCGTAGGTGC---------GGGTGGCG---GCGTCGGCGAGTCTAAGGCGTTGGACTTGCCTGTGCTCGGGGGAATCGG
TACGGGA------ACCAGCACCATTACCGGCCCGCTGGTGGTG---------GTTCCTGGGATCCCTGCTATTGGCCCAT
GA------------------------------------------------------------------------------
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>chr2A_1_TraesCS2A01G460800
TCAATCCTCCTTTTGCTGGCTAACACAATGATCGATGGGGAGGTACAAAGCTGGGAGAATCGAGAGTTTGCTAATTAGTT
TTCAATGTCTGCAGTTATAGAATTACATTATAAAACGCAAACTAATCTAACACTGAAAATAAACTTATTCCTCCGATTCT
GACACCGTGTTAGTACAATTTTGTATTAAAATTATACTAAAATAGCGTCAATTAATTTGAATTGGATGGAGTTCCTGCTT
GGTCGCTCACCCATGCGGCCGGGATGCACTGTGGATCGGTGTGACGATGCTTGTCCGTTTGTTCCCTTCCCTTCTCAACG
GTAGACGATCTAGTAGTGGCCGGCGGCAGCGAGTAGGTTTTCTCGATCGCAAGACTGGGGTCGAGCAGATTGGAAACCAA
GGTATTAGAGGAGACACAACTACCGTGTACGCTTTTTTTTACTTTGAGACAAACAACTACGGTGTACTCCTACGTGAGAG
TAGTACTTGAGCCTGGGCCCTTTCCTTCTACGGTGGGTTGTTCTTTTTT-ATTTATTTTCTCCTGATATTTGGGCATTTG
ACCCGCTGCAGCAATCACATTTCCATTTTCCATTTTCCATTTCCATTT-----------------TCTACCGAAGAAACA
CA--CCAATTGACTCACCTCGACTGTTTGGCCTTCTCGATCGACTGCGTGCGATAAGAAAAGTCAGCACGGATTCAAGGA
CAATAATTC-CATCCGCTTCATTCCAATCCATCGACGTCGACATGCGGCCATACCTGCAGCATGCATCATTGCATCTCTC
GCCCGCCCGTGACCT-------GAGAAGGACGGGCCAGCATGTCGCACCTCTACCTACTAGTACCATCCTCCTCGTCTGC
GCGGACGAGGCACGGGCACGGCCA--------CCCCGCCACCCCCCTGCAACTCGCCTATAAG------AAGCAGCGTAC
ACACGATGCTAAGCCCAAGCTCACTCAAACACATCCAAACAACAC-------------------------TATCTCCTCA
GTACA----------------------------TCAGA---GCCTCCCGGTTAGCAATATGGCAAAGTGTCTCGCCGTCG
CGCTCCTGCTACTGGTGGTGCTCGCGTCCTGCGAAGGGAGGGAGCTGAATGAGAAGG---------TTGCAGCGACGCGT
GTCGTAGGTGC---------GGGTGGCG---GCGTCGGCGAGTCTAAGGCGTTGGACTTGCCTGTGCTCGGGGGAATCGG
TACGGGA------ACCAGCACCATTACCGGCCCGCTGGTGGTG---------GTTCCTGGGATCCCTGCTATTGGCCCAT
GATCATCTCTGGCTCATGTGCTGCCTAACA-GGAAGCTAAAGCTCGCCTTGTCGCTTTAGA----TTCTGTA--------
----------GGTAGCACCGCCGTGAAGAAAAAAGCGGG---------CGTTTTGCTCATGTCCATGTTCGGTACTGAGC
GCCTGTATCAACTGTC-----------------------ATCTG---TATCTATTTCCAGTTCA-TGTTGTCGTATTTTT
CGTTTCTTGATGTGCTACATGTAT----CATCAATA-AATAATAATTA---CTATGTTTGTGTGATCGTCTTCTGGGATG
CAAATC-----TCAACTGGCTGCATAATCGATGTCCTATTT-CGTCACTCTAATCACCAAGTCCCATGTTCAGAGTCGTT
CATGTTCCG----GGGTAGCAAATTTCGTTGCAGTAACTCCAATGCTTTGAAAGCGTTAAGGTGACTGGATCAATAGGGA
TATGCATGGAGCATGGGTATCTCTTATCAAGTCTCTCCCGGATTTGGAGTTTTCTTTGTGTGTGTGTGTGTGTGGGTCGT
GA------------------------------------------------------------------------------
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-------------------------------------------------------------AATTTTTTTTGCGGGGTAA
AATTTTTCATTCAATCAACTAGGAGCATTACAGTCCTTTGCCACGAGTCCAGCTACCTCGTCAGGCCCTTGCCTCAGCCA
TACAGCAGTCCTGGGGCCAGCGTCACCCATCTGCCCAAGAACATGGCTGACATTATTTCGATTTCTACTCACATGCAATA
ACACATGCTCTCTACCTCCCTCCACCAAGGGACCAATCAGTGTACTGGCATCATGAAAAATGTAGCCACTTTTGCATTAT
GGATTATTTGTGGGTGAAATCAAAGAGGTCACAAAAAATATCACTCATCGAGTTCATTTTAACATGTCAAATTGGAAGGT
GATTGTATAGAAATTCATAAGCTATCCATATATATGACGATACATGTAAACCCCAAAAAAGTTTGAATAGCTTAATCGGG
TTTGGAATCCTCAACTTTATAGCAATAAATTATATTAAATAATTTTGGGTTGGTTTGATTTTGTATTGAGAGAGATACAT
CATCGATGGAGATAAAAA--------------------------------------------------------------
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>chr2B_6
CCC-----CCTTTTGCTGGCTAACACAATGATCGATGGAGAGGTACAAAGCTTGGAGAATCGAAAGTTTTCTAATTAGTT
TTCAATGTCTGCAGTTATAGAATTACATTATAAGACACAAACTAATCTAACATTGAAAATAAACTAATTCCTCCGATTCA
AATTAATTGACCCTAGCAG-----------------------TAGCGTCAATTAATATGAATCGGAGGGAGTTCCTGCTT
GGTCGTTCATCCATGCGGCCGGAATACGCTGTGGATCGGTGTGACGACGCTTGTGCGCCTGTCCCCTTCCCTTCTCAACG
GTAGATGATCTACTAGTGACCGGGGGCAGCGAGTAGGTTTTCCCGATCGCAAGACTAGGGTCGAGCAGATTGGAAACCAA
GGTATTAGAGGAGACACAACTACCGTGTACGC------------------------------------------------
---------------------------------------------------TTTATTTTCTCCTGATATTTGGGCATTTG
ACCCGCTGCTGCAATCACATTTCCATTTTCCAGGAGACTCCCATCCTTGATCCGGAAAGGAAAAATCTACCGAAGAAACA
CAAACCAATTCACTCACCTCGACTGGTTGGCCTTCTCGATCGACTGCGTGCGATAAGAAAAGTCAGCACGGATTCAAGGA
CAATAATTC-CATCTGCTCCATTCCAATCCATCGACGTAGACATGCCGCCATACCTGCAGCATGCATCATTGCATCTCTC
GCCCGCCCGTGACCT-------GAGAAGGACGGGCCAGCATGTTGCACCTCTACCTACTAGTACTATCCTCCTCTCCTCC
GCGGACGAGGCATGGGCACGGCCA--------CCCCGCCACCCCG-TGCAACTCACCTATAAG------AGGCAGAGT--
ACACGATGCTAAGCCCAAGCTCACTCAAACACAGCCACACAACACTATC-------------------------TCCTCT
GTA------------GTAGTACTACTATTAC---CAGAGCCGCCTCCCAGTTAGCA--ATGGCAAAGTGTCTCGCCGTCG
CGCTCCTGCTGCTGGTGGTGCTCGCGTCATGCGAAGGGAGGGAGCTGAATGAGAAGG---------TTGCAGCGACGCGT
GGCGCAGGTGC---------GGGTGGTG---GCGTCGGCGAGTCTAAGGCGTTGGACTTGCCTTTGCTCGGGGGAACCGG
TACGGGA------ACCAGCACCATTACCGGCCCGCTGGTGGTG---------CTTCCTGGGATCCCTGCTATTGGCCCAT
GATCATCTCTGGCTCATGTGCTGGCTTACA-AGGAGCTAAAGCTCGCCTTGTCGCTTTAGA----TTCTGTA--------
----------GGTAGCACCGCCGGGAAGGAAAAAGCGGA---------CGTTTTGCTCATTTCCATGTTCGGTACTGAGC
GCCTGTATCAACTGTC-----------------------ATCTGTACTATCTATTTCCAGTTCA-TGTTCTCGTATTTTT
CGTTCCTTGATGTGCTACATGTAC----CATCAATA-AATAATAATTA---CTATGTTAGTGTGATCGTCTTCTTGGATG
CAAATC-----TCAACTGGTTGCATCATCGATGTTCTGTTTCTGTCACTCTAATCACAAAGTCCCAAGTTCAGAGTCGTT
CATGTTGTG----GGGTAGCAAATTTCGTTGCAGTAACTCCAATGCTTTGAAAGCGTTAAGGTGATTGGATTAATAGGGA
TATGCATGGAGCATGGGTATCTCTTATCAAGTCTCTCCCGGATTTGGAGTTTTCTTTGTGTGTGTGTGGGTCGTGGATT-
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---------------------------------------------------------------TTTTTTTTGCGGGGTAA
ATTTTTTCATTCAATCAACTAGGAGCAGTACAGTCCTTTGCTACGAGTCCAGCTATCTCGTCAGGCCCCTGCCCCAGCCA
TACAGCAGTCCTGGGGCCAGCGTGACCCATCTGCCCAAGAACATGGCTCACATTATTTTGGTTTCTACTCACATGCAATA
ACACATGCTCTCTACCTCCCTCCACCTAGGGACCAATCAGTGTACTGGCATCATGAAAAATTTAGCCACTCTTGCACTAT
GGATTATTTGTGGGTGAAACCAAAGAGGTCACAAAAAATAGCACTTATCGAGTTCATTTTAACATGTCAAATTGGAAGGT
GATTGTAGAGAAATTCATAAGCTATCCATA----TGACGATACATGTAAACCCCAAAAAAGTTTGAATAGCTTATTCGGG
TTTGGAATCCTCAACTTTATAGCAATAAATTATATTAAATAATTTTGGGTTGGTTTGATTTTGTATTGAGAGAGATACAT
CATCGATGTAGATAAAAA--------------------------------------------------------------
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>chr2D_501
TTTTCTCCTG----------------------------------------------------------------------
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-----------------------------ACGGTGGGCTGTTCTTTTTACATTTATTTTCTCCTGATATTTGGGCGTTTG
ACCCGCTGCAGCAATCACATTTTCATTTTCCAGGAGACTCCCATCCTGGATCGGGAAAGGAAAAATCTACCGAAGAAGCA
CAAACCAATTGACTCACCTCGACTGGTTGGCCTTCTCGATCGACTGCGTGCGATAAGAAAAGTCAGCACGGATTCAAGGA
CAATAATTC-CATCCGCTCCATTCCAATCCATCGACGTCGACATGCCGCCATACCTGTAGCATGCATCATTGCATCTCTC
GCCCGCCCGTGACCT-------GAGAAGGACGGGCCAGCATGTCGCGCCTCTACCTACTAGTACCATCCTCCTCGTCTGC
GAGGACGAGGCACGGGCACGGCCA--------CCCCGCCACCCCG-TGGAACTCACCTATAAG------AGGCAGCGT--
ACACGATGCTAAGCCCAAGCTCACTCAAACACAGCCACACAACACTATC-------------------------TCCTCA
GTA------------G---------TATTAC---CAGAGCCGCCTCCCAGTTAGCA--ATGGCAAAGTGTCTCGCCGTCG
CGCTCCTACTGCTGGTGGTGCTCGCGTCCTGCGAAGGGAGGGAGCTGAATGAGAAGG---------TTGCAGCGACACGC
GGTGCCGGTGC---------CGGTGGTG---GCGTCGGCGAGTCTAAGGCGTTGGACTTGCCTTTGCTCGGGGGAACCGG
TACGGGA------ACCAGCACCATTACTGGCCCGCTGGTGGTG---------CTGCCTGGGATCCCTGCTATTGGCCCAT
GATCATCTCTGGCTCATGTGCTGGCTTACA-AGAAGCTCAAGCTCGCCTTGTCGCTTTAGA----TTCTATA--------
----------GGTAG-------------AAAAAAGCGGG---------CGTTTTGCTCATGTCCACGTTTGGTACTGAGC
GTCTGTATCAACTGTC-----------------------ATCTG---TATCTATTTCCAGTTCA-TGTTGTCGTATTTTT
CGTTCCTTGATGTGCTACATGTAT----CATCAATA-AAAAATAATTA---CTATGTTAGTGTGATCGTCTTCTGGGATG
CAAATC-----TCAACTGGCTGCATCATCGATGTCCTATTT-CGTCACTCTAATCACCAAGTCCCAAGTTCAGAGTCGTT
CATGTTCCGGGCCGGGTAGCAAATTTCGTTGCAGCAACTCCAATGCTTTGAAAGCGTTAAGGTGATTTGATTAATAGGGA
TATGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGAATTTTTTTTGCTGGGTAA
TTTTTTTCATTCAATCAACTAGGAGCATTACAGTCCTTGGCCACGAGTCCAGCTATCTTGTCAGGCCCCTGCCTCAGCCA
TACAGCAGTCCTGGGGCCAGCGTGACCCATCTGCCCAAGAACATGGCTGACATTATTTTGGTCTCTACTCACATGCAATA
ACACATGCTCTCTACCTCCCTCCACCTAGGGACCAATCAGTGTACTGGCATCATGAAAAATTTAGCCACTCTTGCATTAT
GGATTATTTGTGGGTGAAATCAAAGAGGTCACGAAAAATATCACTCATCGAGTTCATTTTAACATGTCAAATTGGAAGGT
GATTGTAGAGAAACTCATAAGCTATCCATA----TGACGATACATGTAAACCCCAAAAAAGTTTGAATAGCTTATTCGGG
TTTGGAATCCTCAACTTTATAGCAATAAATTATATTAAATAATTTTAGGTTGGTTTGATTTTGTATTGAGAGAGATACAT
CATCGATGTAGATAAAAATAATGATAATAACAACATCAATGATAAGATGAATACTACTCCCTCCGTGCGAAAATACTTGT
CCTAGAAATGGATAAAATGAACGTATCTATAACTAAGATAAGTCTAGATACAACCATTTCGAGGACAAGTATTTTCGGAC
GGAGGGAGTACTAACTAACAAATAATACTACAACTCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNTCTTCCTCCCCTATTCTCCAATACTAATCCCGCATCTGGCTGATTATGTTAAAACGTAATAAAATTTT
CGTAGGTATAGCATTACTCACTAACTAATTTTTTTTTTTGAAATAGAGGCAAAAGCTTGCTTTTACATTAATTAAGAAGA
ATATAGTTGCCTGCTTAATTACAGGAAAATTGGGCAAAAAACGATAACATCGACGGTCAAACCCGTACACAGACTCAACA
AGCCAACAAGGACACTGCAGATGGCATGCCACGAAAGCCACCCCCCGCGAACCATCTTGCAGGCTACTCCCAAAAGAAAA
AGAAGCGGAGAGGAAGGCACATACTAATGGCTAACAAACAATGAAGGCACCAACCCAACCTTGTTGCCAATGTCATGAAC
ACCATGGTTCCCATCTTCTGCTAGCTAGCGTCGAACCATGAATGACGGTGTCAAAGGAGCAAGGTCCCTGTCATGAACGC
CTCTGACTGCTCCAAAAGATTGGTCACGCGTGCCAACCACAGGGGGAAAGAGTCCTCCAGCTTGCGCAGCTGGTGGAGTG
TTAACTCCACCAAGTTTTGAAGCTCATCACCAAATGAGTCAAGCATAGCATCACCGGACTTTACCACACCATCATGATCA
ACACAACCTTCATTTGAAGCTTCAAAAATCCTTGCATATACCTCGCATCATGGAAAATCGAGGGCATGGAAGACTTGCCG
AAGGCACATGACAACACGGACGAGCCCTTCATCCCACGTATATCCATGGACCCTCCCTTGGTTCTGCGACCACAACCTTC
GCCAGACCACAAGGATAGCAGCAAGCGGACGATCCCCTTTGGTGGCGCCAGGTCCCCTTTGCTAGAGTCACCGTTGCCAC
AATCCACGCCAGAAACTTGGCCATCTGCGTCGGCCAGAGATGACCATAGCCCCACATGAGCAACTTCGACCTCATCAGGG
CACAAGGAATATGGTGATGACAAATAACAACAACAACAATGAAAATAATAATGATGATGATAATAATAATAGTAGTAGTG
GTGGTGGTGGTGGTGGTAGTGGTAGTAATTTTAATATACTAGAGTTTATATAGCAAATAACTTGGTTGTACCTATGCTAG
ATTAGTGAATTAGATGAGCAACATAGATAGTCGAGATGTAATAATTCATATTAGAGGTAATAATTGGATTATTATACATG
AGACTGTCCTATTTAGATTTACTATTTTATTAGAGGTAATAATTCATATTTGTATTATGAGCTAAGAGAATTGTGAGATA
TAAAGATAAGGAGACCGAGTAACTTTTCATTTTCTTCAAATACATAGCTTAATTCTAGTTCGTCCACCGAACTAGATACT
GGAAGTTATCTAATCCCTCTCGCATTGTTTCACTTTTAGTATCTGCGGCCTCGAGAGAATCTATTCAAACTAACTTTCAG
TTGACGAAAGCAACACTGGTGTTACTACCATAATTCTACTTTACATGCATTGAAGAAGGCTAGATGATTGTAGTATTTGA
ATTAATGCAAATGTGGTTAAAGCAACTTATGGGAAATGAAGTGAGTTGTGTCAAATGCTTGGCAGTAGCGATATCTCGTG
TAATCATGGACTATTCAATGTGGTGCAATCCATGAAGGAACAGGTAGAAATCATTCATCTTCACAAATAAATCAGTTTGT
GTCAACCTAAAAGTAATTTCTAGAAATGGCAGACATAGATATCAATGTTGATAGCCTTGCCACGAATAGAGAACACATAT
AATACAAGCAATCAACATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATAATAATAATAATAA
TAATAATAATAATAAGAACAACAACAACAACAAGAAATAACAAATTATACTACTACTACTACTACTACTACTACTACTAA
TAATAATAATAATAATAATAATAATAATAATAATAACAAGAACAATAAATTTTCTAAAGAGGGAATTGCTAGCTTTAAAA
TTTATATATACATATTGTCGTTAGAATCATTTTGCACGTAAATGCTTTTTAGTGATAAGCATTTCCGCAGAAAAAAAAGG
ATAAGCTTCCATGATCAGATAGCTAGCATGATACTCCCTCCGATCCATAATAAGTATCGTGGTTTTAGTTCAAATCTGAA
CTAAAATCACGGCACTTGTTCGAACTAAAACCATGACACTTATTTTGAATTAAACCACCACATTCATTATGGATCGGGAA
GAGTATTATTTAATCAGAAAACTTTTGTGTTATACTCCCTTCGTTTTCAAATATAAGTCTTTTTAGAGATTCCAACAAGG
GACTACATACGAAACAAAATGAGTGAATCTACACTCTAAAATATGTCTACATACATCCGTATGTTGTAGTTCATTTGAAA
CCTCTAAAAATACTTACATTTAGGAACCGAGGGAGTATAATAAAGCACAAAATATCTGAATAACTTAGTAAGCTCATTAT
TATTTGTAAATATTGCTGTTGATGGCACTGCACGTCTGCACGTATATATCAGCAGCTGGCCCATGTCTTAAATGGAATGT
AGCAGCATCCGTGAGTACTTGTGTGTCAGAGATGGCCAAATATGTAAGCAACGTAAATATCTTCAGCAAGCCGGCAACGT
TCCACTTGGAGAGCACAAAGATCCTAAAATCAGCGTCGCAAATTTCCAGGAAAAAAACAACTAGCCCCGCCCCATCTAAA
GTCATGCACAGTTCTAGGAATCTCCAACCTTGATCGGGAAAAAAATCTACTGAAGAAACGAAACCAATAATAGGCCCTAA
TTGGACGGCGGCAGCTTGACTAGCTTGCCATCTCGACTGCTATTAGTCGGCACGGATAGAGGACAATCTATAAATCCAGC
ATTCATCTTGACCAGCTTGCCATTCCAAAGTTTCCAATCCACCGACCTTGACGTGCCGCCATGCATTCATCTCCCCGCGC
ATTCTACCCATTCTATCCTCCTCCCCTGAAATTGAGGGGCGCCGCACATGTCGCACCCCTACCCATTCTATCCTCCGCCC
ATGTGCCGTACGACGCACGGCGCTGCCGTGCAGCTGGCCTATAAGATGCAACGTGCACCATGCTCAGGCTAACCTCACTC
AAACACATCAGCCACACAAGCTAGACTCTTTCCTCAGACCTCAGTAGTATATCATAACCTCCTAGTTAGTAATGGCAAAG
TGTGTCGGCGTCGCGCTCCTGCTACTGGTGGTGCTCGCGTCCTGCGAAGGGAGGGAGCTGAACGAGAAG
>chr2D_669
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------------------------------------------------TGCGATGAGATCAGTCGGCACGGATTCACGGC
CAGGCGAAGGCATCCGCCCCATTCCAATGCACCGACGTTGACACGCCGCCCATACATGCACATGCCGCTCTC--------
-CCAGCCCTTGACCGTGTGCTCGAGCAGGAGGGACCCGCGTCTCGCACCTCTACCCA----TCCTACCCTCCTCTCCTGC
GCCGACGACGGACGGCCACCCCGCCTCAACACCCCCGCCACCCGG-TGCAGCTCGCCTATAAG------AAGCAACGC--
ACACGATGCTAAGAAATTACCTCCTCAAACACAGCCACGCAATCCAGA----------------------------CTGT
CTCCTGTCCTCAGCCGTAGTACTCTACTCCGAGTTAGA---ACCTCCCAGTTAGCAATATGGCGAAGTGCCTCGCCGTCG
CGCTCCTGCTGCTGGTGGTGCTCGCGTCCTGCGAAGGGAGGGAGCTGAGCCAGAAGGACGGCGCACTGGGAGCGACACGC
GGTGCCGGCGT---------CGCCGAGTCCAAGGCTTCTTC------GGGTTCGGGGTTGCCAGACCTGCCGGTTGTGGG
AACCGGA------ACCAGTACCATTAACGGCCCGCTGGTGGTG---------ATTCCTGGGGTGCCTTCTCA---CCCAT
GATCATCTCTACTTCATGTGCTGAGTTACGTACAAGCTGAAGCTGAACTTGTGGGTTTTAGACTTCTATAGGCTATAGCT
TGCATCGCCCGGAAG-------------AAAAACACCGG---------CGTTTCGCTCATGTCCACGTCCCTAAATGAGT
GTCTGTATTTCAGTATTTCTCAAAAAAAAGAGAGTGTGTATCTG---TATTCCGTTTCAGTTCA-TGTTT--GTATTTTT
CGTTCCTTGGTGTGCTACATGTACGTACCATCAACGTAATACATAATA---CTTTGTCAGTGTGATCGCTTTCTTGAATA
AACACATCCCATCAACAGGTTGAATCATCGATCGTAGAACT------CTCTAATCACAAAGTCCCAAGTCCAGAGTCGTT
CTGTTAAAAGAGCCAGCAAG------CGTTGAGGTAACACCAATGCTTTGAAAGAGGTAAGGTGATTGGATTAATAGGGA
CATGCATGGT-------TATCTCTCATCAACTCTTT--CGGATTTGGAGTTTTCTTTGTCTGCGTG--------------
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>chr2D_806
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---------------------------------GCCCGCCTGTCGCACCTCTACCATTCA-----ATCCTCCTCTCCTGC
GCCAACGACGCACGGCCACCCCGCCTCACCACCCCCGCCACCCCG-TCCAGCTCGCCTATAAGATTAAGAAGCAGCGT--
AGACGATGCTAAGCCTAAGCTCACTCCAACACAGCCACCCAACACTATCACAAAGCCGCACAAGCTAGACTATCTCCTCA
GTA------------G---------TA-----------------------TTAGCAACATGGCAAAGTGCCTCGCCGTCG
CGCTCCTCGTACTGGTGGCGCTCGCGTACTGCGACGGGAGGGAGCTGAACCAGAAGGACCAGGCACTGGCAACGGCACGC
GGTGCCGGTGC---------CGGTGGTG---CCGTCGACGAGTCCAAGGTGCTGGGGCTGCCAGACCTGCCGGTCCTGGG
AACCTTTACCGGTACCAGCACCATTACCGGCCCGCTGGTGGTG---------CTTCCAGGGATCCCTGCTCA---CCCAT
GATCATCTCGAGTTCATGTGCT--------TACAAGATGAAGCTGTCCTTGTGGCTTTAGA----CTTTAGGCTCTAGCT
AACACCGTCCGGAGG-------------AAAAACGCTGG---------CGTTTCACTCGTGCCCATGCTCCTTAATGGGC
GTCTGTATCAACCATCCTGTC------------------ATCTG---TATTTCTTTGCAGTTCTCTGTTCCAGTAATTTT
CGTTCCTTGATGTGCCACATGTAT----AATCAA----------------------------------------------
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>chr2B_868
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---------------GCACGGCCA--------CCCCGCCACCCCG-TCCAGCTCGCCTATAAG------AAGCAGCGT--
AGACGATGCTAAGCCTAAGCTCACTCCAACACAGCCACCCAACACTATCACAAAGCCGCACAAGCTAGACTATCTCCTCA
GTA------------G---------AACTAC---CGGA---GCCTCCCAGTTAGCAATATGGCAAAGTGCCTCGCCGTCG
CGCTCCTCCTACTGGTGGCGCTCGCGTACTGCGACGGGAGGGAGCTGAACCAGAAGGATCAGGCACTAGCAACGGCACGC
GGTGCCGGTGC---------TGGTGGTG---CTGTCGACGAGTCCAAAGCACTAGGGCTGCCAGACCTGCCGCTTGTCGG
AACCGTTACCGGTACCAGCACCATTACCGGCCCGCTGGTGGTG---------CTTCCTGGGATCCCTGCTCA---CCCAT
GATCATCTCGTGTTCATGTGCT--------TACAAGATGAAGCTCACCTTGTGGCTTTAGA----CTTTAGGCTGTAGCT
AGCACCGTCCGGAGG-------------AAAAATGCCGG---------TGTTTCCCTCATGTCCATGCTCCTTAATGGGC
GTCTGTATCAACCAGCCTGTC------------------ATCTG---TATTTCTTTGCAGTTCTTTGTTCCAGTAGTTTT
CGTTCCTTGATGTGCCACATGTAT----CATCAAAGTAATAAATACTACTCCTTTGTCAGTGTGTTCGCCTTCTTGGATA
GACATG-----TCAACAGGTTGCATCACCTACATACAACTT-TGTTACTCTAATCATGAAGTCC----------------
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>chr2A_894
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-------------------------------------------------AACTCGCCTATAAA------AGGCAGCGTAC
ACACGATGCTAAGCCTAAGCTGACTCAAACGCAGCCACACAACAC-------------------------CATCTCCTCA
GTACA----------------------------TCAGA---GCCTCCCAGTTAGCAATATGGCAAAGTATCTCGCCGTCG
CGCTCCTGCTACTGGTGGTGCTCGCGTACTGCGACGGGAGGGAGCTGAACCAGAAGGACCAGGCACTCGCAACGGCACGC
GGTGCTGGTGCGGG------TGCTGGTGGTGGCGTCGGCGAGGAGAAGATTTTGGGGTTGGCAGAGTTGCCGCTTGTGGG
AACTGTTACCGGTACCAGCACAGTTACCGGTCCGGTGGTGGTGGTTCCTGCCCTTCCCGGGATCCCTGCTCA---CCCAT
GATCATCACCAGTTCATATGCTGTCTTACA-AGA---TGAAGCTGAACTAGTGGGTTTATGACT---------TCTAGCT
AGCACCGTCCGGAAG-------------ATAAACACCGG---------TGTTTCGCTCATTTTCACGTTCCTTCATGAGC
GTCTGTATCAACTATCCTATC------------------GTCTG---TATTTTCTTTCAGTTCA-TGTTCTAGTATTTTC
CGTT----------------------------------------------------------------------------
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>chr2A_894
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-------------------------------------------------AACTCGCCTATAAA------AGGCAGCGTAC
ACGCGATGCTAAGCCCAAGCTCACTCAAACGAAGCCACACAACAC-------------------------CATCTCCTCA
GTA------------G---------CATTAC---CAGA---GCCTCCCAGTTAGCAATATGGCAAAGTGTCTCGCCGTCG
CGCTCCTGCTGCTGGTGGTGCTCGCGTACTGCGACGGGAGGGAGCTGAACCAGAAGGACCAGGCACTGGCAACGGCACGC
GGTGCCGGTGC---------CGCCGGTGGTGGCGTCGGCGAAGAGAAGGTTTTGGGGTTGCCAGAGTTGCCGCTTGTGGG
AGCCGTTACAGGGACCAGTACCGTTACCGGTCCGGTGGTGGTGGTTCCTGCCCTTCCCGGGATCCCGGCACA---CCCAT
GATCATCTCCACTTCATGTGCTGGCTTACA--GC---TGAAGCTGAACTTGTAGTTTTATGACT---------TCTAGGT
AGCACCGTCCGTAAG-------------ATAAACGTCGGCCTGACCGGCGTTTCGCTCATTTCCATGTTCCTTAATGAGC
GTCTGTATCAACT-------------------------------------------------------------------
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>chr2B_894
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-------------------------------------------------AACTCGCCTATAAA------AGGCGGCGTAC
ACGCGATGCTAAGCCCAAGCTCACTCAAACGCAGCCACACAACTCTGT----------------------------CTCA
GTACA----------------------------TTAGA---GCCTCCCAGTTAGCAATATGGCAAAGTGTCTCGCCGCCG
CGCTCCTGCTACTGGTGGTGCTCGCGTACTGCGACGGGAGGGAGCTGAACCAGAAGGACCAGGCACTAGCAACGGCACGC
GGTGCTGGTGCCGGTGCCGGTGCCGGTGGTGGCGTCGGCGAGGAGAAGGTTTTGGGGTTGCCAGAGTTGCCGCTTGTGGG
AACCGTTACCGGTACCAGCACAGTTACCGGTCCGGTGGTGGTGGTTCCTGCCCTTCCCGGGATCCCTGCACA---CCCAT
GATCATCTCCACTTCATGTGCTGGCTTACA-AGC---TGAAGCTGAACTTGTAGGCTTATGACT---------TCTAGGT
AGCACCGTCCGTAAG-------------ATAAACGCCGGCCTGACCGGCGTTTCGCTCATTTCCATGTTCCTTAATGAGC
GTCTGTATCAACT-------------------------------------------------------------------
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>chr2D_894
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-------------------------------------------------AACTCGCCTATAAA------AGGCAGCGTAC
ACGCGATGCTAAGCCAAAGCTCACTCAAACGCAGCCACACAACAC-------------------------CATCTCCTCA
GTACA----------------------------TCAGA---GCCTCCCAGTTAGCAATATGGCAAAGTATCTCGCCGTCG
CGCTCCTGCTACTGGTGGTGCTCGCGTACTGCGACGGGAGGGAGCTGAACCAGAAGGACCAGGCACTTGCAACGGCACGC
GGTGCCGGTGC---------TGCCGGTGGTGGCGTCCGCGAGGAGAAGGTTTTGGGGTTGCCGGAGCTGCCGCTTGTGGG
AACTGTTACAGGGACCAGTACCGTTACCGGCCCTGTGGTGGTGGTTCCTGCCCTTCCCGGGATCCCGGCACA---CCCAT
GATCATCTCCACTTCATGTGCTGGCTTACA-AGC---TGAAGCTGAACTTGTAGGTTTATGACT---------TCTAGGT
AGCACCGTCCGTAAG-------------ATAAACGCCG----------------GCTCATTTCCATGTTCCTTAATGAGC
GTCTGTATCAACTATCCTATC------------------GTCTG---TATTTTCTTTCAGTTCA-TGTTCTAGTATTTTC
CGTT----------------------------------------------------------------------------
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---------------------------------------------------------------------
>SNPs
--SSSS-S------------------------------S-------------S----------S-----S----------
---------------------------------S--S---------------S------------S-------------S
S-SSSSS--SSSS--SS-SSSSSSSSSSSSSSSSSSSSSSSS--------------S-----S---S-------------
-----S---S------------S--S-S-------------------S------S--SS---S-----------------
-----S------S-----S----S------------------S-------------S-----------------------
--------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------S----------S-------------------------------
--------------------------------SSSSS-SSSSSSSS----------------------------------
-------------------------S------------------------------------------------------
------------------S---------------------------S---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------SS----------------------------------
---------------------------------S---S------------------------------------------
------------------------------------------------S-------------------------------
--------------------------------------------------------------------------------
-S--S---------------------S-----------------------------------------------------
----------------------------------------------------S---------------------------
-----------------------S--S----S------------------------------------------------
-----------------------S--------------------------------------------------------
--------------------------------------------------------------------------------
----S-----------------------------------------------------S---------------------
-------------------------S----------------------------------------S-------------
-----------------------------------------------------------------S-----S--------
--------------------------------------------------------------------S--SSS--SSSS
SS------------------------------------------------------------------------------
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-S-----------------------------------------------------S------------S-----------
-----------------------S----------------------------------S-S-------------------
--------------------------S----------------------------------S--------S---------
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-------S----------------------SSSS----------------------------------------S-----
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--------S-----------------------------------------------------------------------
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>forward_499
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-------------------------------------------------------------------------------G
TAGTACTTGAGCCTGGGCC-------------------------------------------------------------
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>reverse_2424
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-----------------------CACCCATCTGCCCAAGAACA-------------------------------------
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---------------------------------------------------------------------
